메뉴 건너뛰기




Volumn 55, Issue 3, 2010, Pages 860-870

Erosion of phylogenetic signal in tunicate mitochondrial genomes on different levels of analysis

Author keywords

Aplousobranchiata; Mitochondrial gene order; Phylogenetic signal; Split analysis; Tunicate phylogeny

Indexed keywords

MITOCHONDRIAL DNA; RIBOSOME RNA; TRANSFER RNA;

EID: 77953136217     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2010.03.011     Document Type: Article
Times cited : (32)

References (72)
  • 1
    • 0032417005 scopus 로고    scopus 로고
    • Sequence analysis of the mitochondrial genome of Sarcophyton glaucum: conserved gene order among octocorals
    • Beaton M.J., Roger A.J., and Cavalier-Smith T. Sequence analysis of the mitochondrial genome of Sarcophyton glaucum: conserved gene order among octocorals. J. Mol. Evol. 47 (1998) 697-708
    • (1998) J. Mol. Evol. , vol.47 , pp. 697-708
    • Beaton, M.J.1    Roger, A.J.2    Cavalier-Smith, T.3
  • 3
    • 0033561361 scopus 로고    scopus 로고
    • Animal mitochondrial genomes
    • Boore J.L. Animal mitochondrial genomes. Nucleic Acids Res. 27 (1999) 1767-1780
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1767-1780
    • Boore, J.L.1
  • 4
    • 0033977831 scopus 로고    scopus 로고
    • Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that Pogonophora is not a phylum and Annelida and Arthropoda are not sister taxa
    • Boore J.L., and Brown W.M. Mitochondrial genomes of Galathealinum, Helobdella, and Platynereis: sequence and gene arrangement comparisons indicate that Pogonophora is not a phylum and Annelida and Arthropoda are not sister taxa. Mol. Biol. Evol. 17 (2000) 87-106
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 87-106
    • Boore, J.L.1    Brown, W.M.2
  • 5
    • 0032537194 scopus 로고    scopus 로고
    • Gene translocation links insects and crustaceans
    • Boore J.L., Lavrov D.V., and Brown W.M. Gene translocation links insects and crustaceans. Nature 392 (1998) 667-668
    • (1998) Nature , vol.392 , pp. 667-668
    • Boore, J.L.1    Lavrov, D.V.2    Brown, W.M.3
  • 6
    • 0034043778 scopus 로고    scopus 로고
    • Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
    • Castresana J. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17 (2000) 540-552
    • (2000) Mol. Biol. Evol. , vol.17 , pp. 540-552
    • Castresana, J.1
  • 7
    • 0032584155 scopus 로고    scopus 로고
    • Codon reassignment and amino acid composition in hemichordate mitochondria
    • Castresana J., Feldmaier-Fuchs G., and Paabo S. Codon reassignment and amino acid composition in hemichordate mitochondria. Proc. Natl. Acad. Sci. USA 95 (1998) 3703-3707
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 3703-3707
    • Castresana, J.1    Feldmaier-Fuchs, G.2    Paabo, S.3
  • 8
    • 0034776994 scopus 로고    scopus 로고
    • The complete mitochondrial genome of the hagfish Myxine glutinosa: unique features of the control region
    • Delarbre C., Rasmussen A.S., Arnason U., and Gachelin G. The complete mitochondrial genome of the hagfish Myxine glutinosa: unique features of the control region. J. Mol. Evol. 53 (2001) 634-641
    • (2001) J. Mol. Evol. , vol.53 , pp. 634-641
    • Delarbre, C.1    Rasmussen, A.S.2    Arnason, U.3    Gachelin, G.4
  • 9
    • 67149095243 scopus 로고    scopus 로고
    • Additional molecular support for the new chordate phylogeny
    • Delsuc F., Tsagkogeorga G., Lartillot N., and Philippe H. Additional molecular support for the new chordate phylogeny. Genesis 46 (2008) 592-604
    • (2008) Genesis , vol.46 , pp. 592-604
    • Delsuc, F.1    Tsagkogeorga, G.2    Lartillot, N.3    Philippe, H.4
  • 10
    • 0027214446 scopus 로고
    • Nucleotide sequence of cytochrome oxidase (subunit III) from the mitochondrion of the tunicate Pyura stolonifera: evidence that AGR encodes glycine
    • Durrheim G.A., Corfield V.A., Harley E.H., and Ricketts M.H. Nucleotide sequence of cytochrome oxidase (subunit III) from the mitochondrion of the tunicate Pyura stolonifera: evidence that AGR encodes glycine. Nucleic Acids Res. 21 (1993) 3587-3588
    • (1993) Nucleic Acids Res. , vol.21 , pp. 3587-3588
    • Durrheim, G.A.1    Corfield, V.A.2    Harley, E.H.3    Ricketts, M.H.4
  • 11
    • 23944490624 scopus 로고    scopus 로고
    • Novel repetitive structures, deviant protein-encoding sequences and unidentified ORFs in the mitochondrial genome of the brachiopod Lingula anatina
    • Endo K., Noguchi Y., Ueshima R., and Jacobs H.T. Novel repetitive structures, deviant protein-encoding sequences and unidentified ORFs in the mitochondrial genome of the brachiopod Lingula anatina. J. Mol. Evol. 61 (2005) 36-53
    • (2005) J. Mol. Evol. , vol.61 , pp. 36-53
    • Endo, K.1    Noguchi, Y.2    Ueshima, R.3    Jacobs, H.T.4
  • 12
    • 0001165539 scopus 로고
    • Cases in which parsimony or compatibility methods will be positively misleading
    • Felsenstein J. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 23 (1978) 401-410
    • (1978) Syst. Zool. , vol.23 , pp. 401-410
    • Felsenstein, J.1
  • 13
    • 0028528103 scopus 로고
    • DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
    • Folmer O., Black M., Hoeh W., Lutz R., and Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3 (1994) 294-299
    • (1994) Mol. Mar. Biol. Biotechnol. , vol.3 , pp. 294-299
    • Folmer, O.1    Black, M.2    Hoeh, W.3    Lutz, R.4    Vrijenhoek, R.5
  • 14
    • 34447286481 scopus 로고    scopus 로고
    • How many genes should a systematist sample? Conflicting insights from a phylogenomic matrix characterized by replicated incongruence
    • Gatesy J., DeSalle R., and Wahlberg N. How many genes should a systematist sample? Conflicting insights from a phylogenomic matrix characterized by replicated incongruence. Syst. Biol. 56 (2007) 355-363
    • (2007) Syst. Biol. , vol.56 , pp. 355-363
    • Gatesy, J.1    DeSalle, R.2    Wahlberg, N.3
  • 15
    • 73349119653 scopus 로고    scopus 로고
    • A new dimension in combining data? The use of morphology and phylogenomic data in metazoan systematics
    • Giribet G. A new dimension in combining data? The use of morphology and phylogenomic data in metazoan systematics. Acta Zoologica 91 (2010) 11-19
    • (2010) Acta Zoologica , vol.91 , pp. 11-19
    • Giribet, G.1
  • 16
    • 0141742278 scopus 로고    scopus 로고
    • Transcript mapping and genome annotation of ascidian mtDNA using ESZ data
    • Gissi C., and Pesole G. Transcript mapping and genome annotation of ascidian mtDNA using ESZ data. Genome Res. 13 (2003) 2203-2212
    • (2003) Genome Res. , vol.13 , pp. 2203-2212
    • Gissi, C.1    Pesole, G.2
  • 17
    • 3142777033 scopus 로고    scopus 로고
    • Complete mtDNA of Ciona intestinalis reveals extensive gene rearrangement and the presence of an atp8 and an extra trnM gene in ascidians
    • Gissi C., Iannelli F., and Pesole G. Complete mtDNA of Ciona intestinalis reveals extensive gene rearrangement and the presence of an atp8 and an extra trnM gene in ascidians. J. Mol. Evol. 58 (2004) 376-389
    • (2004) J. Mol. Evol. , vol.58 , pp. 376-389
    • Gissi, C.1    Iannelli, F.2    Pesole, G.3
  • 18
    • 77953129108 scopus 로고    scopus 로고
    • Hyper-variability of ascidian mitochondrial gene order: exposing the myth of deuterostome organelle genome stability
    • Gissi C., Pesole G., Mastrototaro F., Iannelli F., Guida V., and Griggio F. Hyper-variability of ascidian mitochondrial gene order: exposing the myth of deuterostome organelle genome stability. Mol. Biol. Evol. msp234 (2009)
    • (2009) Mol. Biol. Evol. , vol.msp234
    • Gissi, C.1    Pesole, G.2    Mastrototaro, F.3    Iannelli, F.4    Guida, V.5    Griggio, F.6
  • 19
    • 74549158791 scopus 로고    scopus 로고
    • Hypervariability of ascidian mitochondrial gene order: exposing the myth of deuterostome organelle genome stability
    • Gissi C., Pesole G., Mastrototaro F., Iannelli F., Guida V., and Griggio F. Hypervariability of ascidian mitochondrial gene order: exposing the myth of deuterostome organelle genome stability. Mol. Biol. Evol. 27 (2010) 211-215
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 211-215
    • Gissi, C.1    Pesole, G.2    Mastrototaro, F.3    Iannelli, F.4    Guida, V.5    Griggio, F.6
  • 21
    • 3242702091 scopus 로고    scopus 로고
    • The mitochondrial genome of Paraspadella gotoi is highly reduced and reveals that chaetognaths are a sister group to protostomes
    • Helfenbein K.G., Fourcade H.M., Vanjani R.G., and Boore J.L. The mitochondrial genome of Paraspadella gotoi is highly reduced and reveals that chaetognaths are a sister group to protostomes. Proc. Natl. Acad. Sci. USA 101 (2004) 10639-10643
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 10639-10643
    • Helfenbein, K.G.1    Fourcade, H.M.2    Vanjani, R.G.3    Boore, J.L.4
  • 22
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P., and Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 (2001) 754-755
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 23
    • 38849129515 scopus 로고    scopus 로고
    • The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): high genome plasticity at intra-genus level
    • Iannelli F., Griggio F., Pesole G., and Gissi C. The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): high genome plasticity at intra-genus level. BMC Evol. Biol. 7 (2007)
    • (2007) BMC Evol. Biol. , vol.7
    • Iannelli, F.1    Griggio, F.2    Pesole, G.3    Gissi, C.4
  • 24
    • 34547922775 scopus 로고    scopus 로고
    • Mitogenornics reveals two cryptic species in Ciona intestinalis
    • Iannelli F., Pesole G., Sordin P., and Gissi C. Mitogenornics reveals two cryptic species in Ciona intestinalis. Trends Genet. 23 (2007) 419-422
    • (2007) Trends Genet. , vol.23 , pp. 419-422
    • Iannelli, F.1    Pesole, G.2    Sordin, P.3    Gissi, C.4
  • 25
    • 68049142320 scopus 로고    scopus 로고
    • Multiple alignment of DNA sequences with MAFFT
    • Katoh K., Asimenos G., and Toh H. Multiple alignment of DNA sequences with MAFFT. Methods Mol. Biol. 537 (2009) 39-64
    • (2009) Methods Mol. Biol. , vol.537 , pp. 39-64
    • Katoh, K.1    Asimenos, G.2    Toh, H.3
  • 26
    • 40649123235 scopus 로고    scopus 로고
    • The mitochondrial genome of Hydra oligactis (Cnidaria, Hydrozoa) sheds new light on animal mtDNA evolution and cnidarian phylogeny
    • Kayal E., and Lavrov D.V. The mitochondrial genome of Hydra oligactis (Cnidaria, Hydrozoa) sheds new light on animal mtDNA evolution and cnidarian phylogeny. Gene 410 (2008) 177-186
    • (2008) Gene , vol.410 , pp. 177-186
    • Kayal, E.1    Lavrov, D.V.2
  • 27
    • 77949525939 scopus 로고    scopus 로고
    • Long-branch attraction bias and inconsistency in Bayesian phylogenetics
    • Kolaczkowski B., and Thornton J.W. Long-branch attraction bias and inconsistency in Bayesian phylogenetics. PLoS Biol. 4 (2009) e7891
    • (2009) PLoS Biol. , vol.4
    • Kolaczkowski, B.1    Thornton, J.W.2
  • 28
    • 0001890149 scopus 로고
    • The Australian Ascidacea. Part 1, Phlebobranchia and Stolidobranchia
    • Kott P. The Australian Ascidacea. Part 1, Phlebobranchia and Stolidobranchia. Mem. Qld. Mus. 23 (1985) 1-440
    • (1985) Mem. Qld. Mus. , vol.23 , pp. 1-440
    • Kott, P.1
  • 29
    • 0001890149 scopus 로고
    • The Australian Ascidiacea. Part I, Phlebobranchia and Stolidobranchia
    • Kott P. The Australian Ascidiacea. Part I, Phlebobranchia and Stolidobranchia. Mem. Qld. Mus. 23 (1985) 1-440
    • (1985) Mem. Qld. Mus. , vol.23 , pp. 1-440
    • Kott, P.1
  • 30
    • 0025635504 scopus 로고
    • The Australian Ascidacea. Part 2, Aplousobranchia (1)
    • Kott P. The Australian Ascidacea. Part 2, Aplousobranchia (1). Mem. Qld. Mus. 29 (1990) 1-266
    • (1990) Mem. Qld. Mus. , vol.29 , pp. 1-266
    • Kott, P.1
  • 31
    • 0027011301 scopus 로고
    • The Australian Ascidacea. Part 3, Aplousobranchia (2)
    • Kott P. The Australian Ascidacea. Part 3, Aplousobranchia (2). Mem. Qld. Mus. 32 (1992) 375-620
    • (1992) Mem. Qld. Mus. , vol.32 , pp. 375-620
    • Kott, P.1
  • 32
    • 0037802158 scopus 로고    scopus 로고
    • The Australian Ascidacea. Part 4, Aplousobranchia (3), Didemnidae
    • Kott P. The Australian Ascidacea. Part 4, Aplousobranchia (3), Didemnidae. Mem. Qld. Mus. 47 (2001) 1-410
    • (2001) Mem. Qld. Mus. , vol.47 , pp. 1-410
    • Kott, P.1
  • 33
    • 3543012171 scopus 로고
    • Sur la classification des Tuniciers
    • Lahille M. Sur la classification des Tuniciers. CR Acad. Sci. Paris 102 (1886) 1573-1575
    • (1886) CR Acad. Sci. Paris , vol.102 , pp. 1573-1575
    • Lahille, M.1
  • 34
    • 0004080202 scopus 로고
    • Recherches sur les Tuniciers des côtes des France
    • Lahille, F. 1890. Recherches sur les Tuniciers des côtes des France. Faculté des Sciences de Paris. 1-330.
    • (1890) Faculté des Sciences de Paris , pp. 1-330
    • Lahille, F.1
  • 35
    • 38349180130 scopus 로고    scopus 로고
    • ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
    • Laslett D., and Canback B. ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences. Bioinformatics 24 (2008) 172-175
    • (2008) Bioinformatics , vol.24 , pp. 172-175
    • Laslett, D.1    Canback, B.2
  • 36
    • 0028834126 scopus 로고
    • Complete sequence of a sea lamprey (Petromyzon marinus) mitochondrial genome - early establishment of the vertebrate genome organization
    • Lee W.J., and Kocher T.D. Complete sequence of a sea lamprey (Petromyzon marinus) mitochondrial genome - early establishment of the vertebrate genome organization. Genetics 139 (1995) 873-887
    • (1995) Genetics , vol.139 , pp. 873-887
    • Lee, W.J.1    Kocher, T.D.2
  • 37
    • 0030854739 scopus 로고    scopus 로고
    • TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
    • Lowe T.M., and Eddy S.R. TRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25 (1997) 955-964
    • (1997) Nucleic Acids Res. , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 40
    • 0032028997 scopus 로고    scopus 로고
    • Amphioxus mitochondrial DNA, chordate phylogeny, and the limits of inference based on comparisons of sequences
    • Naylor-Gavin J.P., and Brown W.M. Amphioxus mitochondrial DNA, chordate phylogeny, and the limits of inference based on comparisons of sequences. Syst. Biol. 47 (1998) 61-76
    • (1998) Syst. Biol. , vol.47 , pp. 61-76
    • Naylor-Gavin, J.P.1    Brown, W.M.2
  • 42
    • 0019444843 scopus 로고
    • TRNA punctuation model of RNA processing in human mitochondria
    • Ojala D., Montoya J., and Attardi G. TRNA punctuation model of RNA processing in human mitochondria. Nature 290 (1981) 470-474
    • (1981) Nature , vol.290 , pp. 470-474
    • Ojala, D.1    Montoya, J.2    Attardi, G.3
  • 44
    • 33749516796 scopus 로고    scopus 로고
    • Large-scale sequencing and the new animal phylogeny
    • Philippe H., and Telford M.J. Large-scale sequencing and the new animal phylogeny. Trends Ecol. Evol. 21 (2006) 614-620
    • (2006) Trends Ecol. Evol. , vol.21 , pp. 614-620
    • Philippe, H.1    Telford, M.J.2
  • 45
    • 0035722246 scopus 로고    scopus 로고
    • Biases in Maximum likelihood and parsimony: a simulation approach to a 10-taxon case
    • Pol D., and Siddall M.E. Biases in Maximum likelihood and parsimony: a simulation approach to a 10-taxon case. Cladistics 17 (2001) 266-281
    • (2001) Cladistics , vol.17 , pp. 266-281
    • Pol, D.1    Siddall, M.E.2
  • 46
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 47
    • 0035148476 scopus 로고    scopus 로고
    • A novel mitochondrial gene order in the crinoid echinoderm Florometra serratissima
    • Scouras A., and Smith M.J. A novel mitochondrial gene order in the crinoid echinoderm Florometra serratissima. Mol. Biol. Evol. 18 (2001) 61-73
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 61-73
    • Scouras, A.1    Smith, M.J.2
  • 48
    • 33748919994 scopus 로고    scopus 로고
    • Mitochondrial genome of the moon jelly Aurelia aurita (Cnidaria, Scyphozoa): a linear DNA molecule encoding a putative DNA-dependent DNA polymerase
    • Shao Z., Graf S., Chaga O.Y., and Lavrov D.V. Mitochondrial genome of the moon jelly Aurelia aurita (Cnidaria, Scyphozoa): a linear DNA molecule encoding a putative DNA-dependent DNA polymerase. Gene 381 (2006) 92-101
    • (2006) Gene , vol.381 , pp. 92-101
    • Shao, Z.1    Graf, S.2    Chaga, O.Y.3    Lavrov, D.V.4
  • 49
    • 71549149673 scopus 로고    scopus 로고
    • Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny
    • Singh T.R., Tsagkogeorga G., Delsuc F., Blanquart S., Shenkar N., Loya Y., Douzery E.J., and Huchon D. Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny. BMC Genomics 10 (2009)
    • (2009) BMC Genomics , vol.10
    • Singh, T.R.1    Tsagkogeorga, G.2    Delsuc, F.3    Blanquart, S.4    Shenkar, N.5    Loya, Y.6    Douzery, E.J.7    Huchon, D.8
  • 50
    • 53549107487 scopus 로고    scopus 로고
    • Chordate phylogeny and evolution: a not so simple three-taxon problem
    • Stach T. Chordate phylogeny and evolution: a not so simple three-taxon problem. J. Zool. 276 (2008) 117-141
    • (2008) J. Zool. , vol.276 , pp. 117-141
    • Stach, T.1
  • 51
    • 58549095642 scopus 로고    scopus 로고
    • Larval convergence in a colonial tunicate: the organization of the sarcotubular complex in Ecteinascidia turbinata (Perophoridae, Phlebobranchiata, Tunicata, Chordata)
    • Stach T., and Kirbach A. Larval convergence in a colonial tunicate: the organization of the sarcotubular complex in Ecteinascidia turbinata (Perophoridae, Phlebobranchiata, Tunicata, Chordata). Zoomorphology 128 (2009) 1-11
    • (2009) Zoomorphology , vol.128 , pp. 1-11
    • Stach, T.1    Kirbach, A.2
  • 52
    • 58749085203 scopus 로고    scopus 로고
    • Anatomy of the trunk mesoderm in tunicates: homology considerations and phylogenetic interpretation
    • Stach T. Anatomy of the trunk mesoderm in tunicates: homology considerations and phylogenetic interpretation. Zoomorphology 128 (2009) 97-109
    • (2009) Zoomorphology , vol.128 , pp. 97-109
    • Stach, T.1
  • 53
    • 0036438873 scopus 로고    scopus 로고
    • Phylogeny of Tunicata inferred from molecular and morphological characters
    • Stach T., and Turbeville J.M. Phylogeny of Tunicata inferred from molecular and morphological characters. Mol. Phylogenet. Evol. 25 (2002) 408-428
    • (2002) Mol. Phylogenet. Evol. , vol.25 , pp. 408-428
    • Stach, T.1    Turbeville, J.M.2
  • 55
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A. RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22 (2006) 2688-2690
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 56
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML web servers
    • Stamatakis A., Hoover P., and Rougemont J. A rapid bootstrap algorithm for the RAxML web servers. Syst. Biol. 57 (2008) 758-771
    • (2008) Syst. Biol. , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 57
    • 44649188614 scopus 로고    scopus 로고
    • Two circular chromosomes of unequal copy number make up the mitochondrial genome of the rotifer Brachionus plicatilis
    • Suga K., Welch D.B.M., Tanaka Y., Sakakura Y., and Hagiwarak A. Two circular chromosomes of unequal copy number make up the mitochondrial genome of the rotifer Brachionus plicatilis. Mol. Biol. Evol. 25 (2008) 1129-1137
    • (2008) Mol. Biol. Evol. , vol.25 , pp. 1129-1137
    • Suga, K.1    Welch, D.B.M.2    Tanaka, Y.3    Sakakura, Y.4    Hagiwarak, A.5
  • 58
  • 61
    • 33747350705 scopus 로고    scopus 로고
    • Lophotrochozoan mitochondrial genomes
    • Valles Y., and Boore J.L. Lophotrochozoan mitochondrial genomes. Integr. Comp. Biol. 46 (2006) 544-557
    • (2006) Integr. Comp. Biol. , vol.46 , pp. 544-557
    • Valles, Y.1    Boore, J.L.2
  • 62
    • 0028291246 scopus 로고
    • A conserved heptamer motif for ribosomal-RNA transcription termination in animal mitochondria
    • Valverde J.R., Marco R., and Garesse R. A conserved heptamer motif for ribosomal-RNA transcription termination in animal mitochondria. Proc. Natl. Acad. Sci. USA 91 (1994) 5368-5371
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 5368-5371
    • Valverde, J.R.1    Marco, R.2    Garesse, R.3
  • 63
    • 0031851503 scopus 로고    scopus 로고
    • Evolutionary history of free-swimming and sessile lifestyles in urochordates as deduced from 18S rDNA molecular phylogeny
    • Wada H. Evolutionary history of free-swimming and sessile lifestyles in urochordates as deduced from 18S rDNA molecular phylogeny. Mol. Biol. Evol. 15 (1998) 1189-1194
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1189-1194
    • Wada, H.1
  • 64
    • 35448965597 scopus 로고    scopus 로고
    • Visualizing differences in phylogenetic information content of alignments and distinction of three classes of long-branch effects
    • Wägele J.-W., and Mayer C. Visualizing differences in phylogenetic information content of alignments and distinction of three classes of long-branch effects. BMC Evol. Biol. 7 (2007) 147
    • (2007) BMC Evol. Biol. , vol.7 , pp. 147
    • Wägele, J.-W.1    Mayer, C.2
  • 65
    • 0027083319 scopus 로고
    • Animal mitochondrial DNA: structure and evolution
    • Wolstenholme D.R. Animal mitochondrial DNA: structure and evolution. Int. Rev. Cytol. 141 (1992) 173-216
    • (1992) Int. Rev. Cytol. , vol.141 , pp. 173-216
    • Wolstenholme, D.R.1
  • 66
    • 0034848170 scopus 로고    scopus 로고
    • DAMBE: software package for data analysis in molecular biology and evolution
    • Xia X., and Xie Z. DAMBE: software package for data analysis in molecular biology and evolution. J. Hered. 92 (2001) 371-373
    • (2001) J. Hered. , vol.92 , pp. 371-373
    • Xia, X.1    Xie, Z.2
  • 68
    • 33745176613 scopus 로고    scopus 로고
    • Multiple origins of the ascidian-Prochloron symbiosis: molecular phylogeny of photosymbiotic and non-symbiotic colonial ascidians inferred from 18S rDNA sequences
    • Yokobori S., Kurabayashi A., Neilan B.A., Maruyama T., and Hirose E. Multiple origins of the ascidian-Prochloron symbiosis: molecular phylogeny of photosymbiotic and non-symbiotic colonial ascidians inferred from 18S rDNA sequences. Mol. Phylogenet. Evol. 40 (2006) 8-19
    • (2006) Mol. Phylogenet. Evol. , vol.40 , pp. 8-19
    • Yokobori, S.1    Kurabayashi, A.2    Neilan, B.A.3    Maruyama, T.4    Hirose, E.5
  • 69
    • 11144292141 scopus 로고    scopus 로고
    • Complete nucleotide sequence of the mitochondrial genome of Doliolum nationalis with implications for evolution of urochordates
    • Yokobori S., Oshima T., and Wada H. Complete nucleotide sequence of the mitochondrial genome of Doliolum nationalis with implications for evolution of urochordates. Mol. Phylogenet. Evol. 34 (2005) 273-283
    • (2005) Mol. Phylogenet. Evol. , vol.34 , pp. 273-283
    • Yokobori, S.1    Oshima, T.2    Wada, H.3
  • 70
    • 0032729882 scopus 로고    scopus 로고
    • Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochordata)
    • Yokobori S., Ueda T., Feldmaier-Fuchs G., Paabo S., Ueshima R., Kondow A., Nishikawa K., and Watanabe K. Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochordata). Genetics 153 (1999) 1851-1862
    • (1999) Genetics , vol.153 , pp. 1851-1862
    • Yokobori, S.1    Ueda, T.2    Feldmaier-Fuchs, G.3    Paabo, S.4    Ueshima, R.5    Kondow, A.6    Nishikawa, K.7    Watanabe, K.8
  • 71
    • 0027531459 scopus 로고
    • Codons AGA and AGG are read as glycine in ascidian mitochondria
    • Yokobori S., Ueda T., and Watanabe K. Codons AGA and AGG are read as glycine in ascidian mitochondria. J. Mol. Evol. 36 (1993) 1-8
    • (1993) J. Mol. Evol. , vol.36 , pp. 1-8
    • Yokobori, S.1    Ueda, T.2    Watanabe, K.3
  • 72
    • 0242364633 scopus 로고    scopus 로고
    • Mitochondrial genome of Ciona savignyi (Urochordata, Ascidiacea, Enterogona): comparison of gene arrangement and tRNA genes with Halocynthia roretzi mitochondrial genome
    • Yokobori S., Watanabe Y., and Oshima T. Mitochondrial genome of Ciona savignyi (Urochordata, Ascidiacea, Enterogona): comparison of gene arrangement and tRNA genes with Halocynthia roretzi mitochondrial genome. J. Mol. Evol. 57 (2003) 574-587
    • (2003) J. Mol. Evol. , vol.57 , pp. 574-587
    • Yokobori, S.1    Watanabe, Y.2    Oshima, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.