-
1
-
-
0031010579
-
Evidence for a clade of nematodes, arthropods and other moulting animals
-
Aguinaldo AM, Turbeville JM, Linford LS, Rivera MC, Garey JR, Raff RA, Lake JA (1997) Evidence for a clade of nematodes, arthropods and other moulting animals. Nature 387:489-493
-
(1997)
Nature
, vol.387
, pp. 489-493
-
-
Aguinaldo, A.M.1
Turbeville, J.M.2
Linford, L.S.3
Rivera, M.C.4
Garey, J.R.5
Raff, R.A.6
Lake, J.A.7
-
2
-
-
0033018646
-
Mytilus mitochondrial DNA contains a functional gene for a tRNA-Ser(UCN) with a dihydrouridine arm-replacement loop and a pseudo-tRNASer(UCN) gene
-
Beagley CT, Okimoto R, Wolstenholme DR (1999) Mytilus mitochondrial DNA contains a functional gene for a tRNA-Ser(UCN) with a dihydrouridine arm-replacement loop and a pseudo-tRNASer(UCN) gene. Genetics 152:641-652
-
(1999)
Genetics
, vol.152
, pp. 641-652
-
-
Beagley, C.T.1
Okimoto, R.2
Wolstenholme, D.R.3
-
3
-
-
0033555906
-
Tandem repeats finder: A program to analyze DNA sequences
-
Benson G (1999) Tandem repeats finder: A program to analyze DNA sequences. Nucleic Acids Res 27:573-580
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 573-580
-
-
Benson, G.1
-
4
-
-
0032770572
-
Gene order breakpoint evidence in animal mitochondrial phylogeny
-
Blanchette M, Kunisawa T, Sankoff D (1999) Gene order breakpoint evidence in animal mitochondrial phylogeny. J Mol Evol 49:193-203
-
(1999)
J Mol Evol
, vol.49
, pp. 193-203
-
-
Blanchette, M.1
Kunisawa, T.2
Sankoff, D.3
-
5
-
-
0033561361
-
Animal mitochondrial genomes
-
Boore JL (1999) Animal mitochondrial genomes. Nucleic Acids Res 27:1767-1780
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1767-1780
-
-
Boore, J.L.1
-
6
-
-
0034941685
-
Complete mitochondrial genome sequence of the polychaete annelid Platynereis dumerilii
-
Boore JL (2001) Complete mitochondrial genome sequence of the polychaete annelid Platynereis dumerilii. Mol Biol Evol 18:1413-1416
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1413-1416
-
-
Boore, J.L.1
-
7
-
-
0033026967
-
Complete sequence, gene arrangement, and genetic code of mitochondrial DNA of the cephalochordate Branchiostoma floridae (Amphioxus)
-
Boore JL, Daehler LL, Brown WM (1999) Complete sequence, gene arrangement, and genetic code of mitochondrial DNA of the cephalochordate Branchiostoma floridae (Amphioxus). Mol Biol Evol 16:410-418
-
(1999)
Mol Biol Evol
, vol.16
, pp. 410-418
-
-
Boore, J.L.1
Daehler, L.L.2
Brown, W.M.3
-
8
-
-
0034712915
-
Evolution of the chordate body plan: New insights from phylogenetic analyses of deuterostome phyla
-
Cameron CB, Garey JR, Swalla BJ (2000) Evolution of the chordate body plan: new insights from phylogenetic analyses of deuterostome phyla. Proc Natl Acad Sci USA 97:4469-4474
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 4469-4474
-
-
Cameron, C.B.1
Garey, J.R.2
Swalla, B.J.3
-
9
-
-
2942571539
-
The Comparative RNA Web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction
-
Cannone JJ, Subramanian S, Schnare MN, Collett JR, D'Souza LM, Du Y, Feng B, Lin N, Madabusi LV, Muller KM, Pande N, Shang Z, Yu N, Gutell RR (2002) The Comparative RNA Web (CRW) site: An online database of comparative sequence and structure information for ribosomal, intron, and other RNAs: Correction. BMC Bioinform 3:15
-
(2002)
BMC Bioinform
, vol.3
, pp. 15
-
-
Cannone, J.J.1
Subramanian, S.2
Schnare, M.N.3
Collett, J.R.4
D'Souza, L.M.5
Du, Y.6
Feng, B.7
Lin, N.8
Madabusi, L.V.9
Muller, K.M.10
Pande, N.11
Shang, Z.12
Yu, N.13
Gutell, R.R.14
-
10
-
-
0023231203
-
Duplication and remoulding of tRNA genes during the evolutionary rearrangement of mitochondrial genomes
-
Cantatore P, Gadaleta MN, Roberti M, Saccone C, Wilson AC (1987) Duplication and remoulding of tRNA genes during the evolutionary rearrangement of mitochondrial genomes. Nature 329:853-855
-
(1987)
Nature
, vol.329
, pp. 853-855
-
-
Cantatore, P.1
Gadaleta, M.N.2
Roberti, M.3
Saccone, C.4
Wilson, A.C.5
-
11
-
-
0011891374
-
In vitro transcription of human mitochondrial DNA: Accurate termination
-
Christianson TW, Clayton DA (1986) In vitro transcription of human mitochondrial DNA: Accurate termination. Proc Natl Acad Sci USA 83:6277-6281
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 6277-6281
-
-
Christianson, T.W.1
Clayton, D.A.2
-
12
-
-
0019645690
-
Ciona edwardsi (Roule, 1886) espèce littorale de méditerranée distincte de Ciona intestinalis Linné, 1767
-
Copello M, Devos L, Lafargue F (1981) Ciona edwardsi (Roule, 1886) espèce littorale de méditerranée distincte de Ciona intestinalis Linné, 1767. Vie Milieu 31:243-253
-
(1981)
Vie Milieu
, vol.31
, pp. 243-253
-
-
Copello, M.1
Devos, L.2
Lafargue, F.3
-
13
-
-
0030759333
-
Prediction of transmembrane alpha-helices in procariotic membrane proteins: The dense alignment surface method
-
Cserzo M, Wallin E, Simon I, von Heijne G, Elofsson A (1997) Prediction of transmembrane alpha-helices in procariotic membrane proteins: The dense alignment surface method. Prot Eng 10:673-676
-
(1997)
Prot Eng
, vol.10
, pp. 673-676
-
-
Cserzo, M.1
Wallin, E.2
Simon, I.3
Von Heijne, G.4
Elofsson, A.5
-
14
-
-
2242464840
-
The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins
-
Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KE, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen IA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-Bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Kohara Y, Levine M, Satoh N, Rokhsar DS (2002) The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 298:2157-2167
-
(2002)
Science
, vol.298
, pp. 2157-2167
-
-
Dehal, P.1
Satou, Y.2
Campbell, R.K.3
Chapman, J.4
Degnan, B.5
De Tomaso, A.6
Davidson, B.7
Di Gregorio, A.8
Gelpke, M.9
Goodstein, D.M.10
Harafuji, N.11
Hastings, K.E.12
Ho, I.13
Hotta, K.14
Huang, W.15
Kawashima, T.16
Lemaire, P.17
Martinez, D.18
Meinertzhagen, I.A.19
Necula, S.20
Nonaka, M.21
Putnam, N.22
Rash, S.23
Saiga, H.24
Satake, M.25
Terry, A.26
Yamada, L.27
Wang, H.G.28
Awazu, S.29
Azumi, K.30
Boore, J.31
Branno, M.32
Chin-Bow, S.33
DeSantis, R.34
Doyle, S.35
Francino, P.36
Keys, D.N.37
Haga, S.38
Hayashi, H.39
Hino, K.40
Imai, K.S.41
Inaba, K.42
Kano, S.43
Kobayashi, K.44
Kobayashi, M.45
Lee, B.I.46
Makabe, K.W.47
Manohar, C.48
Matassi, G.49
Medina, M.50
Mochizuki, Y.51
Mount, S.52
Morishita, T.53
Miura, S.54
Nakayama, A.55
Nishizaka, S.56
Nomoto, H.57
Ohta, F.58
Oishi, K.59
Rigoutsos, I.60
Sano, M.61
Sasaki, A.62
Sasakura, Y.63
Shoguchi, E.64
Shin-i, T.65
Spagnuolo, A.66
Stainier, D.67
Suzuki, M.M.68
Tassy, O.69
Takatori, N.70
Tokuoka, M.71
Yagi, K.72
Yoshizaki, F.73
Wada, S.74
Zhang, C.75
Hyatt, P.D.76
Larimer, F.77
Detter, C.78
Doggett, N.79
Glavina, T.80
Hawkins, T.81
Richardson, P.82
Lucas, S.83
Kohara, Y.84
Levine, M.85
Satoh, N.86
Rokhsar, D.S.87
more..
-
15
-
-
0027104516
-
Structure/function analysis of yeast mitochondrial ATP synthase subunit 8
-
Devenish RJ, Papakonstantinou T, Galanis M, Law RH, Linnane AW, Nagley P (1992) Structure/function analysis of yeast mitochondrial ATP synthase subunit 8. Ann NY Acad Sci 671:403-414
-
(1992)
Ann NY Acad Sci
, vol.671
, pp. 403-414
-
-
Devenish, R.J.1
Papakonstantinou, T.2
Galanis, M.3
Law, R.H.4
Linnane, A.W.5
Nagley, P.6
-
16
-
-
0027214446
-
Nucleotide sequence of cytochrome oxidase (subunit III) from the mitochondrion of the tunicate Pyura stolonifera: Evidence that AGR encodes glycine
-
Durrheim GA, Corfield VA, Harley EH, Ricketts MH (1993) Nucleotide sequence of cytochrome oxidase (subunit III) from the mitochondrion of the tunicate Pyura stolonifera: Evidence that AGR encodes glycine. Nucleic Acids Res 21:3587-3588
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 3587-3588
-
-
Durrheim, G.A.1
Corfield, V.A.2
Harley, E.H.3
Ricketts, M.H.4
-
17
-
-
0022760932
-
Two overlapping genes in bovine mitochondrial DNA encode membrane components of ATP synthase
-
Fearnley IM, Walker JE (1986) Two overlapping genes in bovine mitochondrial DNA encode membrane components of ATP synthase. EMBO J 5:2003-2008
-
(1986)
EMBO J
, vol.5
, pp. 2003-2008
-
-
Fearnley, I.M.1
Walker, J.E.2
-
18
-
-
0032426882
-
The complete sequence of the mitochondrial genome of Saccharomyces cerevisiae
-
Foury F, Roganti T, Lecrenier N, Purnelle B (1998) The complete sequence of the mitochondrial genome of Saccharomyces cerevisiae. FEBS Lett 440:325-313
-
(1998)
FEBS Lett
, vol.440
, pp. 325-1313
-
-
Foury, F.1
Roganti, T.2
Lecrenier, N.3
Purnelle, B.4
-
19
-
-
0141742278
-
Transcript mapping and genome annotation of ascidian mtDNA using EST data
-
Gissi C, Pesole G (2003) Transcript mapping and genome annotation of ascidian mtDNA using EST data. Genome Res 13:2203-2212
-
(2003)
Genome Res
, vol.13
, pp. 2203-2212
-
-
Gissi, C.1
Pesole, G.2
-
20
-
-
18344398178
-
Genome structure and gene content in protist mitochondrial DNAs
-
Gray MW, Lang BF, Cedergren R, Golding GB, Lemieux C, Sankoff D, Turmel M, Brossard N, Delage E, Littlejohn TG, Plante I, Rioux P, Saint-Louis D, Zhu Y, Burger G (1998) Genome structure and gene content in protist mitochondrial DNAs. Nucleic Acids Res 26:865-878
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 865-878
-
-
Gray, M.W.1
Lang, B.F.2
Cedergren, R.3
Golding, G.B.4
Lemieux, C.5
Sankoff, D.6
Turmel, M.7
Brossard, N.8
Delage, E.9
Littlejohn, T.G.10
Plante, I.11
Rioux, P.12
Saint-Louis, D.13
Zhu, Y.14
Burger, G.15
-
21
-
-
0029868410
-
Cleanup: A fast computer program for removing redundancies from nucleotide
-
Grillo G, Attimonelli M, Liuni S, Pesole G (1996) CLEANUP: A fast computer program for removing redundancies from nucleotide. Comput Appl Biosci 12:1-8
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 1-8
-
-
Grillo, G.1
Attimonelli, M.2
Liuni, S.3
Pesole, G.4
-
22
-
-
0023019723
-
Both the conserved stem-loop and divergent 5′-flanking sequences are required for initiation at the human mitochondrial origin of light- strand DNA replication
-
Hixson JE, Wong TW, Clayton DA (1986) Both the conserved stem-loop and divergent 5′-flanking sequences are required for initiation at the human mitochondrial origin of light-strand DNA replication. J Biol Chem 261:2384-2093
-
(1986)
J Biol Chem
, vol.261
, pp. 2384-12093
-
-
Hixson, J.E.1
Wong, T.W.2
Clayton, D.A.3
-
23
-
-
0026740213
-
A novel mitochondrial genome organization for the blue mussel, Mytilus edulis
-
Hoffmann RJ, Boore JL, Brown WM (1992) A novel mitochondrial genome organization for the blue mussel, Mytilus edulis. Genetics 131:397-412
-
(1992)
Genetics
, vol.131
, pp. 397-412
-
-
Hoffmann, R.J.1
Boore, J.L.2
Brown, W.M.3
-
25
-
-
0003563410
-
Taxonomic studies of Ciona intestinalis (L.) and its allies
-
Hoshino Z, Nishikawa T (1985) Taxonomic studies of Ciona intestinalis (L.) and its allies. Publ Seto Mar Biol Lab 10:61-79
-
(1985)
Publ Seto Mar Biol Lab
, vol.10
, pp. 61-79
-
-
Hoshino, Z.1
Nishikawa, T.2
-
26
-
-
0036156248
-
The mitochondrial genomes of the human hookworms, Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea)
-
Hu M, Chilton NB, Gasser RB (2002) The mitochondrial genomes of the human hookworms, Ancylostoma duodenale and Necator americanus (Nematoda: Secernentea). Int J Parasitol 32:145-158
-
(2002)
Int J Parasitol
, vol.32
, pp. 145-158
-
-
Hu, M.1
Chilton, N.B.2
Gasser, R.B.3
-
27
-
-
0001822670
-
Phylogenetic implications of genome rearrangement and sequence evolution in echinoderm mitochondrial DNA
-
Paul CRC, Smith AB (eds). Clarendon Press, Oxford
-
Jacobs HT, Balfe P, Cohen B, Farquharson A, Comito L (1988) Phylogenetic implications of genome rearrangement and sequence evolution in echinoderm mitochondrial DNA. In: Paul CRC, Smith AB (eds) Echinoderm phylogeny and evolutionary biology. Clarendon Press, Oxford, pp 121-137
-
(1988)
Echinoderm Phylogeny and Evolutionary Biology
, pp. 121-137
-
-
Jacobs, H.T.1
Balfe, P.2
Cohen, B.3
Farquharson, A.4
Comito, L.5
-
28
-
-
4444306167
-
Mitochondrial DNA analysis of Boltenia echinata ibuki (OKA, 1934)
-
Sawada H, Yokosawa H, Lambert CC (eds). Springer-Verlag, Tokyo
-
Kakuda T (2001) Mitochondrial DNA analysis of Boltenia echinata ibuki (OKA, 1934). In: Sawada H, Yokosawa H, Lambert CC (eds) The biology of ascidians. Springer-Verlag, Tokyo, pp 283-289
-
(2001)
The Biology of Ascidians
, pp. 283-289
-
-
Kakuda, T.1
-
29
-
-
0031914143
-
Ascidian mitochondrial tRNA(Met) possessing unique structural characteristics
-
Kondow A, Yokobori S, Ueda T, Watanabe K (1998) Ascidian mitochondrial tRNA(Met) possessing unique structural characteristics. Nucleosides Nucleotides 17:531-539
-
(1998)
Nucleosides Nucleotides
, vol.17
, pp. 531-539
-
-
Kondow, A.1
Yokobori, S.2
Ueda, T.3
Watanabe, K.4
-
30
-
-
0027482104
-
Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
-
Kumazawa Y, Nishida M (1993) Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J Mol Evol 37:380-398
-
(1993)
J Mol Evol
, vol.37
, pp. 380-398
-
-
Kumazawa, Y.1
Nishida, M.2
-
31
-
-
0025697351
-
Preliminary note on the genetic isolation of Ciona species (Ascidiacea, Urochordata)
-
Lambert C, Lafargue F, Lambert G (1990) Preliminary note on the genetic isolation of Ciona species (Ascidiacea, Urochordata). Vie Milieu 40:293-295
-
(1990)
Vie Milieu
, vol.40
, pp. 293-295
-
-
Lambert, C.1
Lafargue, F.2
Lambert, G.3
-
32
-
-
0000801564
-
A global overview os ascidian introductions and their possible impact on the endemic fauna
-
Sawada H, Yokosawa H, Lambert CC (eds). Springer-Verlag, Tokyo
-
Lambert G (2001) A global overview os ascidian introductions and their possible impact on the endemic fauna. In: Sawada H, Yokosawa H, Lambert CC (eds) The biology of ascidians. Springer-Verlag, Tokyo, pp 249-257
-
(2001)
The Biology of Ascidians
, pp. 249-257
-
-
Lambert, G.1
-
33
-
-
0035109373
-
Trichinella spiralis mtDNA: A nematode mitochondrial genome that encodes a putative ATP8 and normally structured tRNAS and has a gene arrangement relatable to those of coelomate metazoans
-
Lavrov DV, Brown WM (2001) Trichinella spiralis mtDNA: A nematode mitochondrial genome that encodes a putative ATP8 and normally structured tRNAS and has a gene arrangement relatable to those of coelomate metazoans. Genetics 157:621-637
-
(2001)
Genetics
, vol.157
, pp. 621-637
-
-
Lavrov, D.V.1
Brown, W.M.2
-
34
-
-
0033917042
-
Phylogenies inferred from mitochondrial gene orders-a cautionary tale from
-
Le TH, Blair D, Agatsuma T, Humair P-F, Campbell NJH, Iwagami M, Littlewood DT, Peacock B, Johnston DA, Bartley J, Rollinson D, Herniou EA, Zarlenga DS, McManus DP (2000) Phylogenies inferred from mitochondrial gene orders-a cautionary tale from. Mol Biol Evol 17:1123-1125
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1123-1125
-
-
Le, T.H.1
Blair, D.2
Agatsuma, T.3
Humair, P.-F.4
Campbell, N.J.H.5
Iwagami, M.6
Littlewood, D.T.7
Peacock, B.8
Johnston, D.A.9
Bartley, J.10
Rollinson, D.11
Herniou, E.A.12
Zarlenga, D.S.13
McManus, D.P.14
-
35
-
-
0030854739
-
tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
-
Lowe TM, Eddy SR (1997) tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25:955-964
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 955-964
-
-
Lowe, T.M.1
Eddy, S.R.2
-
36
-
-
0033176443
-
Molecular phylogenetics, tRNA evolution, and historical biogeography in anguid lizards and related taxonomic families
-
Macey JR, Schulte JA, 2nd, Larson A, Tuniyev BS, Orlov N, Papenfuss TJ (1999) Molecular phylogenetics, tRNA evolution, and historical biogeography in anguid lizards and related taxonomic families. Mol Phylogenet Evol 12:250-227
-
(1999)
Mol Phylogenet Evol
, vol.12
, pp. 250-1227
-
-
Macey, J.R.1
Schulte II, J.A.2
Larson, A.3
Tuniyev, B.S.4
Orlov, N.5
Papenfuss, T.J.6
-
38
-
-
0027281552
-
Each of three positively-charged amino acids in the C-terminal region of yeast mitochondrial ATP synthase subunit 8 is required for assembly
-
Papakonstantinou T, Galanis M, Nagley P, Devenish RJ (1993) Each of three positively-charged amino acids in the C-terminal region of yeast mitochondrial ATP synthase subunit 8 is required for assembly. Biochim Biophys Acta 1144:22-32
-
(1993)
Biochim Biophys Acta
, vol.1144
, pp. 22-32
-
-
Papakonstantinou, T.1
Galanis, M.2
Nagley, P.3
Devenish, R.J.4
-
39
-
-
0029944149
-
Non-functional variants of yeast mitochondrial ATP synthase subunit 8 that assemble into the complex
-
Papakonstantinou T, Law RH, Nagley P, Devenish RJ (1996a) Non-functional variants of yeast mitochondrial ATP synthase subunit 8 that assemble into the complex. Biochem Mol Biol Int 39:253-260
-
(1996)
Biochem Mol Biol Int
, vol.39
, pp. 253-260
-
-
Papakonstantinou, T.1
Law, R.H.2
Nagley, P.3
Devenish, R.J.4
-
40
-
-
0030037177
-
Molecular genetic analysis of the central hydrophobic domain of subunit 8 of yeast mitochondrial ATP synthase
-
Papakonstantinou T, Law RH, Nesbitt WS, Nagley P, Devenish RJ (1996b) Molecular genetic analysis of the central hydrophobic domain of subunit 8 of yeast mitochondrial ATP synthase. Curr Genet 30:12-18
-
(1996)
Curr Genet
, vol.30
, pp. 12-18
-
-
Papakonstantinou, T.1
Law, R.H.2
Nesbitt, W.S.3
Nagley, P.4
Devenish, R.J.5
-
41
-
-
0029049426
-
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
-
Perna NT, Kocher TD (1995) Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes. J Mol Evol 41:353-358
-
(1995)
J Mol Evol
, vol.41
, pp. 353-358
-
-
Perna, N.T.1
Kocher, T.D.2
-
42
-
-
0029948768
-
Linguistic analysis of nucleotide sequences: Algorithms for pattern recognition and analysis of codon strategy
-
Pesole G, Attimonelli M, Saccone C (1996) Linguistic analysis of nucleotide sequences: Algorithms for pattern recognition and analysis of codon strategy. Methods Enzymol 266:281-294
-
(1996)
Methods Enzymol
, vol.266
, pp. 281-294
-
-
Pesole, G.1
Attimonelli, M.2
Saccone, C.3
-
43
-
-
0033915990
-
PatSearch: A pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance
-
Pesole G, Liuni S, D'Souza M (2000) PatSearch: A pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance. Bioinformatics 16:439-450
-
(2000)
Bioinformatics
, vol.16
, pp. 439-450
-
-
Pesole, G.1
Liuni, S.2
D'Souza, M.3
-
44
-
-
0034945410
-
Animal phylogeny and the ancestry of bilaterians: Inferences from morphology and 18S rDNA gene sequences
-
Peterson KJ, Eernisse DJ (2001) Animal phylogeny and the ancestry of bilaterians: Inferences from morphology and 18S rDNA gene sequences. Evol Dev 3:170-205
-
(2001)
Evol Dev
, vol.3
, pp. 170-205
-
-
Peterson, K.J.1
Eernisse, D.J.2
-
45
-
-
0002084108
-
Initiator tRNAs and initiation of protein synthesis
-
Soll D, Rajbhandary U (eds). American Society of Microbiology, Washington, DC
-
Rajbhandary U, Chow MC (1995) Initiator tRNAs and initiation of protein synthesis. In: Soll D, Rajbhandary U (eds) tRNA structure, biosynthesis and function. American Society of Microbiology, Washington, DC, pp 511-528
-
(1995)
tRNA Structure, Biosynthesis and Function
, pp. 511-528
-
-
Rajbhandary, U.1
Chow, M.C.2
-
46
-
-
0031950474
-
Evolution of asymmetric base composition in the mitochondrial genome of mammals
-
Reyes A, Gissi C, Pesole G, Saccone C (1998) Evolution of asymmetric base composition in the mitochondrial genome of mammals. Mol Biol Evol 15:957-966
-
(1998)
Mol Biol Evol
, vol.15
, pp. 957-966
-
-
Reyes, A.1
Gissi, C.2
Pesole, G.3
Saccone, C.4
-
47
-
-
85005534988
-
The evolution of the mitochondrial genome
-
Bittar EE (ed). JAI Press, Greenwich, CT
-
Saccone C, Sbisà E (1994) The evolution of the mitochondrial genome. In: Bittar EE (ed) Principles of medical biology. JAI Press, Greenwich, CT, pp 39-72
-
(1994)
Principles of Medical Biology
, pp. 39-72
-
-
Saccone, C.1
Sbisà, E.2
-
48
-
-
0032860013
-
Evolutionary genomics in Metazoa: The mitochondrial DNA as model system
-
Saccone C, De Giorgi C, Gissi C, Pesole G, Reyes A (1999) Evolutionary genomics in Metazoa: The mitochondrial DNA as model system. Gene 238:195-209
-
(1999)
Gene
, vol.238
, pp. 195-209
-
-
Saccone, C.1
De Giorgi, C.2
Gissi, C.3
Pesole, G.4
Reyes, A.5
-
50
-
-
0037012570
-
Ciona intestinalis cDNA projects: Expressed sequence tag analyses and gene expression profiles during embryogenesis
-
Satou Y, Takatori N, Fujiwara S, Nishikata T, Saiga H, Kusakabe T, Shin-i T, Kohara Y, Satoh N (2002) Ciona intestinalis cDNA projects: Expressed sequence tag analyses and gene expression profiles during embryogenesis. Gene 287:83-96
-
(2002)
Gene
, vol.287
, pp. 83-96
-
-
Satou, Y.1
Takatori, N.2
Fujiwara, S.3
Nishikata, T.4
Saiga, H.5
Kusakabe, T.6
Shin-i, T.7
Kohara, Y.8
Satoh, N.9
-
52
-
-
0035942752
-
An Early Cambrian tunicate from China
-
Shu DG, Chen L, Han J, Zhang XL (2001) An Early Cambrian tunicate from China. Nature 411:472-473
-
(2001)
Nature
, vol.411
, pp. 472-473
-
-
Shu, D.G.1
Chen, L.2
Han, J.3
Zhang, X.L.4
-
53
-
-
0031804156
-
Compilation of tRNA sequences and sequences of tRNA genes
-
Sprinzl M, Horn C, Brown M, Ioudovitch A, Steinberg S (1998) Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res 26:148-153
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 148-153
-
-
Sprinzl, M.1
Horn, C.2
Brown, M.3
Ioudovitch, A.4
Steinberg, S.5
-
54
-
-
0032125592
-
Complete sequence of the amphioxus (Branchiostoma lanceolatum) mitochondrial genome: Relations to vertebrates
-
Spruyt N, Delarbre C, Gachelin G, Laudet V (1998) Complete sequence of the amphioxus (Branchiostoma lanceolatum) mitochondrial genome: relations to vertebrates. Nucleic Acids Res 26:3279-3285
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 3279-3285
-
-
Spruyt, N.1
Delarbre, C.2
Gachelin, G.3
Laudet, V.4
-
55
-
-
0036438873
-
Phylogeny of Tunicata inferred from molecular and morphological characters
-
Stach T, Turbeville JM (2002) Phylogeny of Tunicata inferred from molecular and morphological characters. Mol Phylogenet Evol 25:408-428
-
(2002)
Mol Phylogenet Evol
, vol.25
, pp. 408-428
-
-
Stach, T.1
Turbeville, J.M.2
-
56
-
-
0038381485
-
The molecular neighborhood of subunit 8 of yeast mitochondrial F1F0-ATP synthase probed by cysteine scanning mutagenesis and chemical modification
-
Stephens AN, Khan MA, Roucou X, Nagley P, Devenish RJ (2003) The molecular neighborhood of subunit 8 of yeast mitochondrial F1F0-ATP synthase probed by cysteine scanning mutagenesis and chemical modification. J Biol Chem 278:17867-17875
-
(2003)
J Biol Chem
, vol.278
, pp. 17867-17875
-
-
Stephens, A.N.1
Khan, M.A.2
Roucou, X.3
Nagley, P.4
Devenish, R.J.5
-
57
-
-
0002791333
-
Phylogeny of the Urochordates: Implications for Chordata evolution
-
Sawada H, Yokosawa H, Lambert CC (eds). Springer-Verlag, Tokyo
-
Swalla B (2001) Phylogeny of the Urochordates: Implications for Chordata evolution. In: Sawada H, Yokosawa H, Lambert CC (eds) The biology of ascidians. Springer-Verlag, Tokyo, pp 219-224
-
(2001)
The Biology of Ascidians
, pp. 219-224
-
-
Swalla, B.1
-
59
-
-
0033230183
-
Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences: A unique wobble rule in animal mitochondria
-
Tomita K, Ueda T, Ishiwa S, Crain PF, McCloskey JA, Watanabe K (1999) Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences: A unique wobble rule in animal mitochondria. Nucleic Acids Res 27:4291-4297
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 4291-4297
-
-
Tomita, K.1
Ueda, T.2
Ishiwa, S.3
Crain, P.F.4
McCloskey, J.A.5
Watanabe, K.6
-
60
-
-
0028243693
-
Deuterostome phylogeny and the sister group of the chordates: Evidence from molecules and morphology
-
Turbeville JM, Schulz JR, Raff RA (1994) Deuterostome phylogeny and the sister group of the chordates: Evidence from molecules and morphology. Mol Biol Evol 11:648-655
-
(1994)
Mol Biol Evol
, vol.11
, pp. 648-655
-
-
Turbeville, J.M.1
Schulz, J.R.2
Raff, R.A.3
-
61
-
-
0028291246
-
A conserved heptamer motif for ribosomal RNA transcription termination in animal mitochondria
-
Valverde JR, Marco R, Garesse R (1994) A conserved heptamer motif for ribosomal RNA transcription termination in animal mitochondria. Proc Natl Acad Sci USA 91:5368-5371
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 5368-5371
-
-
Valverde, J.R.1
Marco, R.2
Garesse, R.3
-
62
-
-
0027083319
-
Animal mitochondrial DNA: Structure and evolution
-
Wolstenholme DR (1992) Animal mitochondrial DNA: structure and evolution. Int Rev Cytol 141:173-216
-
(1992)
Int Rev Cytol
, vol.141
, pp. 173-216
-
-
Wolstenholme, D.R.1
-
63
-
-
0027531459
-
Codons AGA and AGG are read as glycine in ascidian mitochondria
-
Yokobori S, Ueda T, Watanabe K (1993) Codons AGA and AGG are read as glycine in ascidian mitochondria. J Mol Evol 36: 1-8
-
(1993)
J Mol Evol
, vol.36
, pp. 1-8
-
-
Yokobori, S.1
Ueda, T.2
Watanabe, K.3
-
64
-
-
0032729882
-
Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochodata)
-
Yokobori S, Ueda T, Feldmaier-Fuchs G, Paabo S, Ueshima R, Kondow A, Nishikawa K, Watanabe K (1999) Complete DNA sequence of the mitochondrial genome of the ascidian Halocynthia roretzi (Chordata, Urochodata). Genetics 153:1851-1862
-
(1999)
Genetics
, vol.153
, pp. 1851-1862
-
-
Yokobori, S.1
Ueda, T.2
Feldmaier-Fuchs, G.3
Paabo, S.4
Ueshima, R.5
Kondow, A.6
Nishikawa, K.7
Watanabe, K.8
-
65
-
-
0034822301
-
Genetic code variations in mitochondria: tRNA as a major determinant of genetic code plasticity
-
Yokobori S, Suzuki T, Watanabe K (2001) Genetic code variations in mitochondria: tRNA as a major determinant of genetic code plasticity. J Mol Evol 53:314-326
-
(2001)
J Mol Evol
, vol.53
, pp. 314-326
-
-
Yokobori, S.1
Suzuki, T.2
Watanabe, K.3
-
66
-
-
0029916924
-
The complete nucleotide sequence of the mitochondrial genome of the lungfish (Protopterus dolloi) supports its phylogenetic position as a close relative of land vertebrates
-
Zardoya R, Meyer A (1996) The complete nucleotide sequence of the mitochondrial genome of the lungfish (Protopterus dolloi) supports its phylogenetic position as a close relative of land vertebrates. Genetics 142:1249-1263
-
(1996)
Genetics
, vol.142
, pp. 1249-1263
-
-
Zardoya, R.1
Meyer, A.2
-
67
-
-
0023470085
-
Fossil appendicularians in the early Cambrian
-
Zhang A (1987) Fossil appendicularians in the early Cambrian. Sci Sinica (B) 30:888-896
-
(1987)
Sci Sinica (B)
, vol.30
, pp. 888-896
-
-
Zhang, A.1
-
68
-
-
0036097948
-
Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data
-
Winchell CJ, Sullivan J, Cameron CB, Swalla BJ, Mallatt J (2002) Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data. Mol Biol Evol 19:762-776
-
(2002)
Mol Biol Evol
, vol.19
, pp. 762-776
-
-
Winchell, C.J.1
Sullivan, J.2
Cameron, C.B.3
Swalla, B.J.4
Mallatt, J.5
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