-
2
-
-
0037270345
-
Seeing chordate evolution through the Ciona genome sequence
-
DOI 10.1186/gb-2003-4-3-208
-
Seeing chordate evolution through the Ciona genome sequence. C Cãestro S Bassham JH Postlethwait, Genome Biol 2003 4 208 10.1186/gb-2003-4-3-208 12620098 (Pubitemid 36546591)
-
(2003)
Genome Biology
, vol.4
, Issue.3
, pp. 208
-
-
Canestro, C.1
Bassham, S.2
Postlethwait, J.H.3
-
3
-
-
2242464840
-
The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins
-
DOI 10.1126/science.1080049
-
The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. P Dehal Y Satou RK Campbell J Chapman B Degnan A De Tomaso B Davidson A Di Gregorio M Gelpke DM Goodstein, Science 2002 298 2157 2167 10.1126/science.1080049 12481130 (Pubitemid 35471235)
-
(2002)
Science
, vol.298
, Issue.5601
, pp. 2157-2167
-
-
Dehal, P.1
Satou, Y.2
Campbell, R.K.3
Chapman, J.4
Degnan, B.5
De Tomaso, A.6
Davidson, B.7
Di Gregorio, A.8
Gelpke, M.9
Goodstein, D.M.10
Harafuji, N.11
Hastings, K.E.M.12
Ho, I.13
Hotta, K.14
Huang, W.15
Kawashima, T.16
Lemaire, P.17
Martinez, D.18
Meinertzhagen, I.A.19
Necula, S.20
Nonaka, M.21
Putnam, N.22
Rash, S.23
Saiga, H.24
Satake, M.25
Terry, A.26
Yamada, L.27
Wang, H.-G.28
Awazu, S.29
Azumi, K.30
Boore, J.31
Branno, M.32
Chin-bow, S.33
DeSantis, R.34
Doyle, S.35
Francino, P.36
Keys, D.N.37
Haga, S.38
Hayashi, H.39
Hino, K.40
Imai, K.S.41
Inaba, K.42
Kano, S.43
Kobayashi, K.44
Kobayashi, M.45
Lee, B.-I.46
Makabe, K.W.47
Manohar, C.48
Matassi, G.49
Medina, M.50
Mochizuki, Y.51
Mount, S.52
Morishita, T.53
Miura, S.54
Nakayama, A.55
Nishizaka, S.56
Nomoto, H.57
Ohta, F.58
Oishi, K.59
Rigoutsos, I.60
Sano, M.61
Sasaki, A.62
Sasakura, Y.63
Shoguchi, E.64
Shin-i, T.65
Spagnuolo, A.66
Stainier, D.67
Suzuki, M.M.68
Tassy, O.69
Takatori, N.70
Tokuoka, M.71
Yagi, K.72
Yoshizaki, F.73
Wada, S.74
Zhang, C.75
Hyatt, P.D.76
Larimer, F.77
Detter, C.78
Doggett, N.79
Glavina, T.80
Hawkins, T.81
Richardson, P.82
Lucas, S.83
Kohara, Y.84
Levine, M.85
Satoh, N.86
Rokhsar, D.S.87
more..
-
4
-
-
0037781970
-
The Ciona intestinalis genome: When the constraints are off
-
DOI 10.1002/bies.10302
-
The Ciona intestinalis genome: when the constraints are off. LZ Holland JJ Gibson-Brown, Bioessays 2003 25 529 532 10.1002/bies.10302 12766941 (Pubitemid 36702320)
-
(2003)
BioEssays
, vol.25
, Issue.6
, pp. 529-532
-
-
Holland, L.Z.1
Gibson-Brown, J.J.2
-
5
-
-
33750585486
-
Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida
-
DOI 10.1038/nature05241, PII NATURE05241
-
Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida. SJ Bourlat T Juliusdottir CJ Lowe R Freeman J Aronowicz M Kirschner ES Lander M Thorndyke H Nakano AB Kohn, Nature 2006 444 85 88 10.1038/nature05241 17051155 (Pubitemid 44684760)
-
(2006)
Nature
, vol.444
, Issue.7115
, pp. 85-88
-
-
Bourlat, S.J.1
Juliusdottir, T.2
Lowe, C.J.3
Freeman, R.4
Aronowicz, J.5
Kirschner, M.6
Lander, E.S.7
Thorndyke, M.8
Nakano, H.9
Kohn, A.B.10
Heyland, A.11
Moroz, L.L.12
Copley, R.R.13
Telford, M.J.14
-
6
-
-
33644536713
-
Tunicates and not cephalochordates are the closest living relatives of vertebrates
-
DOI 10.1038/nature04336, PII N04336
-
Tunicates and not cephalochordates are the closest living relatives of vertebrates. F Delsuc H Brinkmann D Chourrout H Philippe, Nature 2006 439 965 968 10.1038/nature04336 16495997 (Pubitemid 43292413)
-
(2006)
Nature
, vol.439
, Issue.7079
, pp. 965-968
-
-
Delsuc, F.1
Brinkmann, H.2
Chourrout, D.3
Philippe, H.4
-
7
-
-
67149095243
-
Additional molecular support for the new chordate phylogeny
-
10.1002/dvg.20450 19003928
-
Additional molecular support for the new chordate phylogeny. F Delsuc G Tsagkogeorga N Lartillot H Philippe, Genesis 2008 46 592 604 10.1002/dvg.20450 19003928
-
(2008)
Genesis
, vol.46
, pp. 592-604
-
-
Delsuc, F.1
Tsagkogeorga, G.2
Lartillot, N.3
Philippe, H.4
-
8
-
-
42149157760
-
Broad phylogenomic sampling improves resolution of the animal tree of life
-
10.1038/nature06614 18322464
-
Broad phylogenomic sampling improves resolution of the animal tree of life. CW Dunn A Hejnol DQ Matus K Pang WE Browne SA Smith E Seaver GW Rouse M Obst GD Edgecombe, Nature 2008 452 745 749 10.1038/nature06614 18322464
-
(2008)
Nature
, vol.452
, pp. 745-749
-
-
Dunn, C.W.1
Hejnol, A.2
Matus, D.Q.3
Pang, K.4
Browne, W.E.5
Smith, S.A.6
Seaver, E.7
Rouse, G.W.8
Obst, M.9
Edgecombe, G.D.10
-
9
-
-
45749086679
-
The amphioxus genome and the evolution of the chordate karyotype
-
DOI 10.1038/nature06967, PII NATURE06967
-
The amphioxus genome and the evolution of the chordate karyotype. NH Putnam T Butts DE Ferrier RF Furlong U Hellsten T Kawashima M Robinson-Rechavi E Shoguchi A Terry JK Yu, Nature 2008 453 1064 1071 10.1038/nature06967 18563158 (Pubitemid 351888243)
-
(2008)
Nature
, vol.453
, Issue.7198
, pp. 1064-1071
-
-
Putnam, N.H.1
Butts, T.2
Ferrier, D.E.K.3
Furlong, R.F.4
Hellsten, U.5
Kawashima, T.6
Robinson-Rechavi, M.7
Shoguchi, E.8
Terry, A.9
Yu Jr., K.10
Benito-Gutierrez, E.11
Dubchak, I.12
Garcia-Fernandez, J.13
Gibson-Brown, J.J.14
Grigoriev, I.V.15
Horton, A.C.16
De Jong, P.J.17
Jurka, J.18
Kapitonov, V.V.19
Kohara, Y.20
Kuroki, Y.21
Lindquist, E.22
Lucas, S.23
Osoegawa, K.24
Pennacchio, L.A.25
Salamov, A.A.26
Satou, Y.27
Sauka-Spengler, T.28
Schmutz, J.29
Shin-I, T.30
Toyoda, A.31
Bronner-Fraser, M.32
Fujiyama, A.33
Holland, L.Z.34
Holland, P.W.H.35
Satoh, N.36
Rokhsar, D.S.37
more..
-
10
-
-
3543012171
-
Sur la classification des Tuniciers
-
Sur la classification des Tuniciers. MF Lahille, C R Acad Sci Paris 1886 102 1573 1575
-
(1886)
C R Acad Sci Paris
, vol.102
, pp. 1573-1575
-
-
Lahille, M.F.1
-
11
-
-
68949084529
-
Etude systématique des Tuniciers
-
Etude systématique des Tuniciers. MF Lahille, C R Assoc Fr Adv Sci 1887 16 667 677
-
(1887)
C R Assoc Fr Adv Sci
, vol.16
, pp. 667-677
-
-
Lahille, M.F.1
-
13
-
-
0035134881
-
The simple tail of chordates: Phylogenetic significance of appendicularians
-
10.1002/1526-968X(200101)29:1<36::AID-GENE1003>3.0.CO;2-J 11135460
-
The simple tail of chordates: phylogenetic significance of appendicularians. A Nishino N Satoh, Genesis 2001 29 36 45 10.1002/1526- 968X(200101)29:1<36::AID-GENE1003>3.0.CO;2-J 11135460
-
(2001)
Genesis
, vol.29
, pp. 36-45
-
-
Nishino, A.1
Satoh, N.2
-
14
-
-
0031851503
-
Evolutionary history of free-swimming and sessile lifestyles in urochordates as deduced from 18S rDNA molecular phylogeny
-
9729883
-
Evolutionary history of free-swimming and sessile lifestyles in urochordates as deduced from 18S rDNA molecular phylogeny. H Wada, Mol Biol Evol 1998 15 1189 1194 9729883
-
(1998)
Mol Biol Evol
, vol.15
, pp. 1189-1194
-
-
Wada, H.1
-
16
-
-
0036438873
-
Phylogeny of Tunicata inferred from molecular and morphological characters
-
DOI 10.1016/S1055-7903(02)00305-6, PII S1055790302003056
-
Phylogeny of Tunicata inferred from molecular and morphological characters. T Stach JM Turbeville, Mol Phylogenet Evol 2002 25 408 428 10.1016/S1055-7903(02)00305-6 12450747 (Pubitemid 35374395)
-
(2002)
Molecular Phylogenetics and Evolution
, vol.25
, Issue.3
, pp. 408-428
-
-
Stach, T.1
Turbeville, J.M.2
-
17
-
-
0034350364
-
Urochordates are monophyletic within the deuterostomes
-
10.1080/10635150050207384 12116483
-
Urochordates are monophyletic within the deuterostomes. BJ Swalla CB Cameron LS Corley JR Garey, Syst Biol 2000 49 52 64 10.1080/10635150050207384 12116483
-
(2000)
Syst Biol
, vol.49
, pp. 52-64
-
-
Swalla, B.J.1
Cameron, C.B.2
Corley, L.S.3
Garey, J.R.4
-
18
-
-
33745176613
-
Multiple origins of the ascidian-Prochloron symbiosis: Molecular phylogeny of photosymbiotic and non-symbiotic colonial ascidians inferred from 18S rDNA sequences
-
DOI 10.1016/j.ympev.2005.11.025, PII S1055790305004082
-
Multiple origins of the ascidian-Prochloron symbiosis: molecular phylogeny of photosymbiotic and non-symbiotic colonial ascidians inferred from 18S rDNA sequences. S Yokobori A Kurabayashi BA Neilan T Maruyama E Hirose, Mol Phylogenet Evol 2006 40 8 19 10.1016/j.ympev.2005.11.025 16531073 (Pubitemid 43903643)
-
(2006)
Molecular Phylogenetics and Evolution
, vol.40
, Issue.1
, pp. 8-19
-
-
Yokobori, S.-i.1
Kurabayashi, A.2
Neilan, B.A.3
Maruyama, T.4
Hirose, E.5
-
19
-
-
33747891749
-
Coloniality has evolved once in Stolidobranch Ascidians
-
DOI 10.1093/icb/icj035, New concepts in managing patients with chronic heart failure: the evolving importance of beta-blockade
-
Coloniality and sociality has evolved once in Stolidobranch ascidians. L Zeng M Jacobs B Swalla, Integr Comp Biol 2006 46 255 268 10.1093/icb/icj035 (Pubitemid 44290592)
-
(2006)
Integrative and Comparative Biology
, vol.46
, Issue.3
, pp. 255-268
-
-
Zeng, L.1
Jacobs, M.W.2
Swalla, B.J.3
-
20
-
-
21344453544
-
Molecular phylogeny of the protochordates: Chordate evolution
-
DOI 10.1139/z05-010
-
Molecular phylogeny of the protochordates: chordate evolution. L Zeng B Swalla, Can J Zool 2005 83 24 33 10.1139/z05-010 (Pubitemid 40906866)
-
(2005)
Canadian Journal of Zoology
, vol.83
, Issue.1
, pp. 24-33
-
-
Zeng, L.1
Swalla, B.J.2
-
21
-
-
0346343449
-
Phylogenetic Position of a Deep-Sea Ascidian, Megalodicopia hians, Inferred from the Molecular Data
-
DOI 10.2108/zsj.20.1243
-
Phylogenetic position of a deep-sea ascidian, Megalodicopia hians, inferred from the molecular data. A Kurabayashi M Okuyama M Ogawa A Takeuchi Z Jing T Naganuma Y Saito, Zoolog Sci 2003 20 1243 1247 10.2108/zsj.20.1243 14569147 (Pubitemid 37519167)
-
(2003)
Zoological Science
, vol.20
, Issue.10
, pp. 1243-1247
-
-
Kurabayashi, A.1
Okuyama, M.2
Ogawa, M.3
Takeuchi, A.4
Jing, Z.5
Naganuma, T.6
Saito, Y.7
-
22
-
-
4444363720
-
Ascidian molecular phylogeny inferred from mtDNA data with emphasis on the Aplousobranchiata
-
DOI 10.1016/j.ympev.2004.06.011, PII S1055790304002015
-
Ascidian molecular phylogeny inferred from mtDNA data with emphasis on the Aplousobranchiata. X Turon S Lopez-Legentil, Mol Phylogenet Evol 2004 33 309 320 10.1016/j.ympev.2004.06.011 15336666 (Pubitemid 39175115)
-
(2004)
Molecular Phylogenetics and Evolution
, vol.33
, Issue.2
, pp. 309-320
-
-
Turon, X.1
Lopez-Legentil, S.2
-
23
-
-
0025635504
-
The Australian Ascidiacea. Part 2, Aplousobranchiata (1)
-
The Australian Ascidiacea. Part 2, Aplousobranchiata (1). P Kott, Mem Qld Mus 1990 29 1 299
-
(1990)
Mem Qld Mus
, vol.29
, pp. 1-299
-
-
Kott, P.1
-
24
-
-
0028064845
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
-
10.1007/BF00160154 7932792
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. Z Yang, J Mol Evol 1994 39 306 314 10.1007/BF00160154 7932792
-
(1994)
J Mol Evol
, vol.39
, pp. 306-314
-
-
Yang, Z.1
-
26
-
-
0027500136
-
Ribosomal RNA secondary structure: Compensatory mutations and implications for phylogenetic analysis
-
8450759
-
Ribosomal RNA secondary structure: compensatory mutations and implications for phylogenetic analysis. MT Dixon DM Hillis, Mol Biol Evol 1993 10 256 267 8450759
-
(1993)
Mol Biol Evol
, vol.10
, pp. 256-267
-
-
Dixon, M.T.1
Hillis, D.M.2
-
27
-
-
1642336483
-
Sampling properties of the bootstrap support in molecular phylogeny: Influence of nonindependence among sites
-
DOI 10.1080/10635150490264680
-
Sampling properties of the bootstrap support in molecular phylogeny: influence of nonindependence among sites. N Galtier, Syst Biol 2004 53 38 46 10.1080/10635150490264680 14965899 (Pubitemid 38370419)
-
(2004)
Systematic Biology
, vol.53
, Issue.1
, pp. 38-46
-
-
Galtier, N.1
-
28
-
-
0036728808
-
Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution
-
12200486
-
Bayesian phylogenetics using an RNA substitution model applied to early mammalian evolution. H Jow C Hudelot M Rattray PG Higgs, Mol Biol Evol 2002 19 1591 1601 12200486
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1591-1601
-
-
Jow, H.1
Hudelot, C.2
Rattray, M.3
Higgs, P.G.4
-
29
-
-
16344384719
-
Consideration of RNA secondary structure significantly improves likelihood-based estimates of phylogeny: Examples from the bilateria
-
DOI 10.1093/molbev/msi099
-
Consideration of RNA secondary structure significantly improves likelihood-based estimates of phylogeny: examples from the bilateria. MJ Telford MJ Wise V Gowri-Shankar, Mol Biol Evol 2005 22 1129 1136 10.1093/molbev/msi099 15689526 (Pubitemid 40471425)
-
(2005)
Molecular Biology and Evolution
, vol.22
, Issue.4
, pp. 1129-1136
-
-
Telford, M.J.1
Wise, M.J.2
Gowri-Shankar, V.3
-
30
-
-
41949131105
-
Molecular evolution of rDNA in early diverging Metazoa: First comparative analysis and phylogenetic application of complete SSU rRNA secondary structures in Porifera
-
10.1186/1471-2148-8-69 18304338
-
Molecular evolution of rDNA in early diverging Metazoa: first comparative analysis and phylogenetic application of complete SSU rRNA secondary structures in Porifera. O Voigt D Erpenbeck G Worheide, BMC Evol Biol 2008 8 69 10.1186/1471-2148-8-69 18304338
-
(2008)
BMC Evol Biol
, vol.8
, pp. 69
-
-
Voigt, O.1
Erpenbeck, D.2
Worheide, G.3
-
31
-
-
2442691520
-
A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process
-
DOI 10.1093/molbev/msh112
-
A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process. N Lartillot H Philippe, Mol Biol Evol 2004 21 1095 1109 10.1093/molbev/msh112 15014145 (Pubitemid 38658218)
-
(2004)
Molecular Biology and Evolution
, vol.21
, Issue.6
, pp. 1095-1109
-
-
Lartillot, N.1
Philippe, H.2
-
32
-
-
9744245452
-
Bayesian estimation of ancestral character states on phylogenies
-
DOI 10.1080/10635150490522232
-
A phylogenetic mixture model for detecting pattern-heterogeneity in gene sequence or character-state data. M Pagel A Meade, Syst Biol 2004 53 571 581 10.1080/10635150490522232 15371247 (Pubitemid 39579641)
-
(2004)
Systematic Biology
, vol.53
, Issue.5
, pp. 673-684
-
-
Pagel, M.1
Meade, A.2
Barker, D.3
-
33
-
-
34248159030
-
Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model
-
DOI 10.1186/1471-2148-7-S1-S4
-
Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model. N Lartillot H Brinkmann H Philippe, BMC Evol Biol 2007 7 Suppl 1 S4 10.1186/1471-2148-7-S1-S4 17288577 (Pubitemid 351826841)
-
(2007)
BMC Evolutionary Biology
, vol.7
, Issue.SUPPL. 1
-
-
Lartillot, N.1
Brinkmann, H.2
Philippe, H.3
-
34
-
-
34248176323
-
Phylogenetic analyses under secondary structure-specific substitution models outperform traditional approaches: Case studies with diploblast LSU
-
DOI 10.1007/s00239-006-0146-3
-
Phylogenetic analyses under secondary structure-specific substitution models outperform traditional approaches: case studies with diploblast LSU. D Erpenbeck SA Nichols O Voigt M Dohrmann BM Degnan JN Hooper G Worheide, J Mol Evol 2007 64 543 557 10.1007/s00239-006-0146-3 17460808 (Pubitemid 46717930)
-
(2007)
Journal of Molecular Evolution
, vol.64
, Issue.5
, pp. 543-557
-
-
Erpenbeck, D.1
Nichols, S.A.2
Voigt, O.3
Dohrmann, M.4
Degnan, B.M.5
Hooper, J.N.A.6
Worheide, G.7
-
35
-
-
0035156561
-
RNA sequence evolution with secondary structure constraints: Comparison of substitution rate models using maximum-likelihood methods
-
11139520
-
RNA sequence evolution with secondary structure constraints: comparison of substitution rate models using maximum-likelihood methods. NJ Savill DC Hoyle PG Higgs, Genetics 2001 157 399 411 11139520
-
(2001)
Genetics
, vol.157
, pp. 399-411
-
-
Savill, N.J.1
Hoyle, D.C.2
Higgs, P.G.3
-
36
-
-
33644826560
-
Computing Bayes factors using thermodynamic integration
-
DOI 10.1080/10635150500433722, PII G4465276345678
-
Computing Bayes factors using thermodynamic integration. N Lartillot H Philippe, Syst Biol 2006 55 195 207 10.1080/10635150500433722 16522570 (Pubitemid 43355101)
-
(2006)
Systematic Biology
, vol.55
, Issue.2
, pp. 195-207
-
-
Lartillot, N.1
Philippe, H.2
-
37
-
-
45849127608
-
Phylogeny and evolution of glass sponges (Porifera, Hexactinellida)
-
DOI 10.1080/10635150802161088, PII 793808056
-
Phylogeny and evolution of glass sponges (porifera, hexactinellida). M Dohrmann D Janussen J Reitner AG Collins G Worheide, Syst Biol 2008 57 388 405 10.1080/10635150802161088 18570034 (Pubitemid 351882199)
-
(2008)
Systematic Biology
, vol.57
, Issue.3
, pp. 388-405
-
-
Dohrmann, M.1
Janussen, D.2
Reitner, J.3
Collins, A.G.4
Worheide, G.5
-
40
-
-
40749100660
-
Phylogenetic relationships of the Clavelinidae and Pycnoclavellidae (Ascidiacea) inferred from mtDNA data
-
10.1111/j.1744-7410.2007.00112.x
-
Phylogenetic relationships of the Clavelinidae and Pycnoclavellidae (Ascidiacea) inferred from mtDNA data. R Perez-Portela X Turon, Inverterbr Biol 2008 127 108 120 10.1111/j.1744-7410.2007.00112.x
-
(2008)
Inverterbr Biol
, vol.127
, pp. 108-120
-
-
Perez-Portela, R.1
Turon, X.2
-
41
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
10.2307/2412923
-
Cases in which parsimony or compatibility methods will be positively misleading. J Felsenstein, Syst Zool 1978 27 401 410 10.2307/2412923
-
(1978)
Syst Zool
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
42
-
-
48949106985
-
Phylogeny of the Aplousobranchiata (Tunicata: Ascidiacea)
-
10.1590/S0101-81752008000200016
-
Phylogeny of the Aplousobranchiata (Tunicata: Ascidiacea). TR Moreno RM Rocha, Revista Brasileira de Zoologia 2008 25 269 298 10.1590/S0101- 81752008000200016
-
(2008)
Revista Brasileira de Zoologia
, vol.25
, pp. 269-298
-
-
Moreno, T.R.1
Rocha, R.M.2
-
43
-
-
0036097948
-
Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data
-
11961109
-
Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data. CJ Winchell J Sullivan CB Cameron BJ Swalla J Mallatt, Mol Biol Evol 2002 19 762 776 11961109
-
(2002)
Mol Biol Evol
, vol.19
, pp. 762-776
-
-
Winchell, C.J.1
Sullivan, J.2
Cameron, C.B.3
Swalla, B.J.4
Mallatt, J.5
-
44
-
-
5644223721
-
Note sur la Classification des Tuniciers
-
Note sur la Classification des Tuniciers. E Perrier, C R Acad Sci Paris 1898 124 1758 1762
-
(1898)
C R Acad Sci Paris
, vol.124
, pp. 1758-1762
-
-
Perrier, E.1
-
45
-
-
0002842366
-
The morphology of the Tunicata, and its bearings on the phylogeny of the Chordata
-
The morphology of the Tunicata, and its bearings on the phylogeny of the Chordata. W Garstang, Quart J Microsc Sci 1928 72 51 187
-
(1928)
Quart J Microsc Sci
, vol.72
, pp. 51-187
-
-
Garstang, W.1
-
46
-
-
0001930702
-
Fine structure of spermatids and sperm of Dolioletta gegenbauri and Doliolum nationalis (Tunicata: Thaliacea): Implications for tunicate phylogeny
-
10.1007/BF00393481
-
Fine structure of spermatids and sperm of Dolioletta gegenbauri and Doliolum nationalis (Tunicata: Thaliacea): implications for tunicate phylogeny. LZ Holland, J Mar Biol 1989 110 83 95 10.1007/BF00393481
-
(1989)
J Mar Biol
, vol.110
, pp. 83-95
-
-
Holland, L.Z.1
-
48
-
-
0001372326
-
Embranchement des Tuniciers
-
Paris: Masson Grassé PP
-
Embranchement des Tuniciers. P Brien, Traité de Zoologie, Tome XI Echinodermes, Stomocordés, Procordés Paris: Masson, Grassé PP, 1948
-
(1948)
Traité de Zoologie, Tome XI Echinodermes, Stomocordés, Procordés
-
-
Brien, P.1
-
50
-
-
0025175485
-
Spermatogenesis in Pyrosoma atlanticum (Tunicata: Thaliacea: Pyrosomatida): Implications for tunicate phylogeny
-
10.1007/BF01316317
-
Spermatogenesis in Pyrosoma atlanticum (Tunicata: Thaliacea: Pyrosomatida): Implications for tunicate phylogeny. LZ Holland, J Mar Biol 1990 105 451 470 10.1007/BF01316317
-
(1990)
J Mar Biol
, vol.105
, pp. 451-470
-
-
Holland, L.Z.1
-
51
-
-
0032958229
-
Tunicate tails, stolons, and the origin of the vertebrate trunk
-
DOI 10.1017/S0006323199005319
-
Tunicate tails, stolons, and the origin of the vertebrate trunk. TC Lacalli, Biol Rev Camb Philos Soc 1999 74 177 198 10.1017/S0006323199005319 10396182 (Pubitemid 29238033)
-
(1999)
Biological Reviews of the Cambridge Philosophical Society
, vol.74
, Issue.2
, pp. 177-198
-
-
Lacalli, T.C.1
-
53
-
-
0002091662
-
The classification of Appendicularia
-
Oxford: Oxford University Press Bone Q
-
The classification of Appendicularia. R Fenaux, The biology of tunicates Oxford: Oxford University Press, Bone Q, 1998 295 306
-
(1998)
The Biology of Tunicates
, pp. 295-306
-
-
Fenaux, R.1
-
54
-
-
60649108394
-
Phylogeny of the families Pyuridae and Styelidae (Stolidobranchiata, Ascidiacea) inferred from mitochondrial and nuclear DNA sequences
-
10.1016/j.ympev.2008.11.014 19059353
-
Phylogeny of the families Pyuridae and Styelidae (Stolidobranchiata, Ascidiacea) inferred from mitochondrial and nuclear DNA sequences. R Perez-Portela JD Bishop AR Davis X Turon, Mol Phylogenet Evol 2009 50 560 570 10.1016/j.ympev.2008.11.014 19059353
-
(2009)
Mol Phylogenet Evol
, vol.50
, pp. 560-570
-
-
Perez-Portela, R.1
Bishop, J.D.2
Davis, A.R.3
Turon, X.4
-
55
-
-
0001890149
-
The Australian Ascidiacea. Part I, Phlebobranchia and Stolidobranchia
-
The Australian Ascidiacea. Part I, Phlebobranchia and Stolidobranchia. P Kott, Mem Qld Mus 1985 23 1 440
-
(1985)
Mem Qld Mus
, vol.23
, pp. 1-440
-
-
Kott, P.1
-
56
-
-
34249276761
-
Ribosomal RNA genes and deuterostome phylogeny revisited: More cyclostomes, elasmobranchs, reptiles, and a brittle star
-
DOI 10.1016/j.ympev.2006.11.023, PII S1055790306004799
-
Ribosomal RNA genes and deuterostome phylogeny revisited: more cyclostomes, elasmobranchs, reptiles, and a brittle star. J Mallatt CJ Winchell, Mol Phylogenet Evol 2007 43 1005 1022 10.1016/j.ympev.2006.11.023 17276090 (Pubitemid 46805075)
-
(2007)
Molecular Phylogenetics and Evolution
, vol.43
, Issue.3
, pp. 1005-1022
-
-
Mallatt, J.1
Winchell, C.J.2
-
57
-
-
0001741062
-
Genetics of actin-related sequences
-
10.1007/BF00288567
-
Genetics of actin-related sequences. R Bernatzky SD Tanksley, Theor Appl Genet 1986 72 314 321 10.1007/BF00288567
-
(1986)
Theor Appl Genet
, vol.72
, pp. 314-321
-
-
Bernatzky, R.1
Tanksley, S.D.2
-
58
-
-
13744252890
-
MAFFT version 5: Improvement in accuracy of multiple sequence alignment
-
DOI 10.1093/nar/gki198
-
MAFFT version 5: improvement in accuracy of multiple sequence alignment. K Katoh K Kuma H Toh T Miyata, Nucleic Acids Res 2005 33 511 518 10.1093/nar/gki198 15661851 (Pubitemid 40360980)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.2
, pp. 511-518
-
-
Katoh, K.1
Kuma, K.-I.2
Toh, H.3
Miyata, T.4
-
59
-
-
0346494979
-
The European ribosomal RNA database
-
10.1093/nar/gkh065 14681368
-
The European ribosomal RNA database. J Wuyts G Perriere Y Van De Peer, Nucleic Acids Res 2004 32 D101 103 10.1093/nar/gkh065 14681368
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 101-103
-
-
Wuyts, J.1
Perriere, G.2
De, P.Y.V.3
-
60
-
-
0034043778
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
-
10742046
-
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. J Castresana, Mol Biol Evol 2000 17 540 552 10742046
-
(2000)
Mol Biol Evol
, vol.17
, pp. 540-552
-
-
Castresana, J.1
-
62
-
-
0037314114
-
Rna Viz 2: An improved representation of RNA secondary structure
-
DOI 10.1093/bioinformatics/19.2.299
-
RnaViz 2: an improved representation of RNA secondary structure. P De Rijk J Wuyts R De Wachter, Bioinformatics 2003 19 299 300 10.1093/ bioinformatics/19.2.299 12538259 (Pubitemid 36181922)
-
(2003)
Bioinformatics
, vol.19
, Issue.2
, pp. 299-300
-
-
De Rijk, P.1
Wuyts, J.2
De Wachter, R.3
-
63
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
10.1093/bioinformatics/14.9.817 9918953
-
MODELTEST: testing the model of DNA substitution. D Posada KA Crandall, Bioinformatics 1998 14 817 818 10.1093/bioinformatics/14.9.817 9918953
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
64
-
-
22944456598
-
-
Evolutionary Biology Centre, Uppsala University.: Program distributed by the author
-
MrModeltest v2.3. JAA Nylander, Evolutionary Biology Centre, Uppsala University.: Program distributed by the author 2004
-
(2004)
MrModeltest v2.3
-
-
Nylander, J.A.A.1
-
65
-
-
0016355478
-
A new look at the statistical model identification
-
10.1109/TAC.1974.1100705
-
A new look at the statistical model identification. H Akaike, IEEE Trans Autom Contr AC 1974 19 716 723 10.1109/TAC.1974.1100705
-
(1974)
IEEE Trans Autom Contr AC
, vol.19
, pp. 716-723
-
-
Akaike, H.1
-
67
-
-
33749638541
-
PAUP*. Phylogenetic Analysis Using Parsimony (* and Other Methods)
-
Sunderland, Massachusetts: Sinauer Associates
-
PAUP*. Phylogenetic Analysis Using Parsimony (* and Other Methods). D Swofford, Version 4.0b10 edn Sunderland, Massachusetts: Sinauer Associates 2002
-
(2002)
Version 4.0b10 Edn
-
-
Swofford, D.1
-
68
-
-
19544387609
-
Evaluating the performance of a successive-approximations approach to parameter optimization in maximum-likelihood phylogeny estimation
-
DOI 10.1093/molbev/msi129
-
Evaluating the performance of a successive-approximations approach to parameter optimization in maximum-likelihood phylogeny estimation. J Sullivan Z Abdo P Joyce DL Swofford, Mol Biol Evol 2005 22 1386 1392 10.1093/molbev/msi129 15758203 (Pubitemid 40734190)
-
(2005)
Molecular Biology and Evolution
, vol.22
, Issue.6
, pp. 1386-1392
-
-
Sullivan, J.1
Abdo, Z.2
Joyce, P.3
Swofford, D.L.4
-
69
-
-
0003437299
-
PHYLIP (PHYLogeny Inference Package)
-
Seattle: Department of Genome Sciences. University of Washington
-
PHYLIP (PHYLogeny Inference Package). J Felsenstein, Version 3.66 edn Seattle: Department of Genome Sciences. University of Washington 2001
-
(2001)
Version 3.66 Edn
-
-
Felsenstein, J.1
-
70
-
-
13444259388
-
TREEFINDER: A powerful graphical analysis environment for molecular phylogenetics
-
DOI 10.1186/1471-2148-4-18
-
TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics. G Jobb A von Haeseler K Strimmer, BMC Evol Biol 2004 4 18 10.1186/1471-2148-4-18 15222900 (Pubitemid 40205271)
-
(2004)
BMC Evolutionary Biology
, vol.4
, pp. 18
-
-
Jobb, G.1
Von Haeseler, A.2
Strimmer, K.3
-
71
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
DOI 10.1093/bioinformatics/btg180
-
MrBayes 3: Bayesian phylogenetic inference under mixed models. F Ronquist JP Huelsenbeck, Bioinformatics 2003 19 1572 1574 10.1093/bioinformatics/btg180 12912839 (Pubitemid 37038874)
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
72
-
-
39149141072
-
AWTY (are we there yet?): A system for graphical exploration of MCMC convergence in Bayesian phylogenetics
-
DOI 10.1093/bioinformatics/btm388
-
AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. JA Nylander JC Wilgenbusch DL Warren DL Swofford, Bioinformatics 2008 24 581 583 10.1093/bioinformatics/btm388 17766271 (Pubitemid 351256305)
-
(2008)
Bioinformatics
, vol.24
, Issue.4
, pp. 581-583
-
-
Nylander, J.A.A.1
Wilgenbusch, J.C.2
Warren, D.L.3
Swofford, D.L.4
|