메뉴 건너뛰기




Volumn 8, Issue 5, 2010, Pages

Most "dark matter" transcripts are associated with known genes

Author keywords

[No Author keywords available]

Indexed keywords

POLYADENYLIC ACID; RNA; UNTRANSLATED RNA; MESSENGER RNA; SPACER DNA;

EID: 77952905505     PISSN: 15449173     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.1000371     Document Type: Article
Times cited : (343)

References (66)
  • 2
    • 12144287461 scopus 로고    scopus 로고
    • Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22
    • Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, et al. (2004) Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22. Genome Res 14: 331-342.
    • (2004) Genome Res , vol.14 , pp. 331-342
    • Kampa, D.1    Cheng, J.2    Kapranov, P.3    Yamanaka, M.4    Brubaker, S.5
  • 3
    • 12344302543 scopus 로고    scopus 로고
    • A comprehensive transcript index of the human genome generated using microarrays and computational approaches
    • Schadt EE, Edwards SW, GuhaThakurta D, Holder D, Ying L, et al. (2004) A comprehensive transcript index of the human genome generated using microarrays and computational approaches. Genome Biol 5: R73.
    • (2004) Genome Biol , vol.5
    • Schadt, E.E.1    Edwards, S.W.2    Guhathakurta, D.3    Holder, D.4    Ying, L.5
  • 4
    • 21044431735 scopus 로고    scopus 로고
    • Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution
    • Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al. (2005) Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. Science 308: 1149-1154.
    • (2005) Science , vol.308 , pp. 1149-1154
    • Cheng, J.1    Kapranov, P.2    Drenkow, J.3    Dike, S.4    Brubaker, S.5
  • 5
    • 34250160256 scopus 로고    scopus 로고
    • RNA maps reveal new RNA classes and a possible function for pervasive transcription
    • Kapranov P, Cheng J, Dike S, Nix DA, Duttagupta R, et al. (2007) RNA maps reveal new RNA classes and a possible function for pervasive transcription. Science 316: 1484-1488.
    • (2007) Science , vol.316 , pp. 1484-1488
    • Kapranov, P.1    Cheng, J.2    Dike, S.3    Nix, D.A.4    Duttagupta, R.5
  • 6
    • 19944376457 scopus 로고    scopus 로고
    • Global identification of human transcribed sequences with genome tiling arrays
    • Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, et al. (2004) Global identification of human transcribed sequences with genome tiling arrays. Science 306: 2242-2246.
    • (2004) Science , vol.306 , pp. 2242-2246
    • Bertone, P.1    Stolc, V.2    Royce, T.E.3    Rozowsky, J.S.4    Urban, A.E.5
  • 7
    • 7444233156 scopus 로고    scopus 로고
    • A gene expression map for the euchromatic genome of Drosophila melanogaster
    • Stolc V, Gauhar Z, Mason C, Halasz G, van Batenburg MF, et al. (2004) A gene expression map for the euchromatic genome of Drosophila melanogaster. Science 306: 655-660.
    • (2004) Science , vol.306 , pp. 655-660
    • Stolc, V.1    Gauhar, Z.2    Mason, C.3    Halasz, G.4    van Batenburg, M.F.5
  • 8
    • 33750482555 scopus 로고    scopus 로고
    • Functionality of intergenic transcription: An evolutionary comparison
    • doi:10.1371/journal.pgen.0020171
    • Khaitovich P, Kelso J, Franz H, Visagie J, Giger T, et al. (2006) Functionality of intergenic transcription: an evolutionary comparison. PLoS Genet 2: e171. doi:10.1371/journal.pgen.0020171.
    • (2006) PLoS Genet , vol.2
    • Khaitovich, P.1    Kelso, J.2    Franz, H.3    Visagie, J.4    Giger, T.5
  • 9
    • 34250305146 scopus 로고    scopus 로고
    • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
    • Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447: 799-816.
    • (2007) Nature , vol.447 , pp. 799-816
    • Birney, E.1    Stamatoyannopoulos, J.A.2    Dutta, A.3    Guigo, R.4    Gingeras, T.R.5
  • 10
  • 11
    • 0142104045 scopus 로고    scopus 로고
    • Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
    • Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, et al. (2002) Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature 420: 563-573.
    • (2002) Nature , vol.420 , pp. 563-573
    • Okazaki, Y.1    Furuno, M.2    Kasukawa, T.3    Adachi, J.4    Bono, H.5
  • 12
    • 33744805985 scopus 로고    scopus 로고
    • Genome-wide analysis of mammalian promoter architecture and evolution
    • Carninci P, Sandelin A, Lenhard B, Katayama S, Shimokawa K, et al. (2006) Genome-wide analysis of mammalian promoter architecture and evolution. Nat Genet 38: 626-635.
    • (2006) Nat Genet , vol.38 , pp. 626-635
    • Carninci, P.1    Sandelin, A.2    Lenhard, B.3    Katayama, S.4    Shimokawa, K.5
  • 13
    • 12344291073 scopus 로고    scopus 로고
    • Dark matter in the genome: Evidence of widespread transcription detected by microarray tiling experiments
    • Johnson JM, Edwards S, Shoemaker D, Schadt EE (2005) Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments. Trends Genet 21: 93-102.
    • (2005) Trends Genet , vol.21 , pp. 93-102
    • Johnson, J.M.1    Edwards, S.2    Shoemaker, D.3    Schadt, E.E.4
  • 14
    • 33745286231 scopus 로고    scopus 로고
    • TUF love for "junk" DNA
    • Willingham AT, Gingeras TR (2006) TUF love for "junk" DNA. Cell 125: 1215-1220.
    • (2006) Cell , vol.125 , pp. 1215-1220
    • Willingham, A.T.1    Gingeras, T.R.2
  • 15
    • 9144252038 scopus 로고    scopus 로고
    • Complete sequencing and characterization of 21,243 full-length human cDNAs
    • Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, et al. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet 36: 40-45.
    • (2004) Nat Genet , vol.36 , pp. 40-45
    • Ota, T.1    Suzuki, Y.2    Nishikawa, T.3    Otsuki, T.4    Sugiyama, T.5
  • 16
    • 56549101959 scopus 로고    scopus 로고
    • Alternative isoform regulation in human tissue transcriptomes
    • Wang ET, Sandberg R, Luo S, Khrebtukova I, Zhang L, et al. (2008) Alternative isoform regulation in human tissue transcriptomes. Nature 456: 470-476.
    • (2008) Nature , vol.456 , pp. 470-476
    • Wang, E.T.1    Sandberg, R.2    Luo, S.3    Khrebtukova, I.4    Zhang, L.5
  • 17
    • 0038688072 scopus 로고    scopus 로고
    • Identification of putative noncoding RNAs among the RIKEN mouse full-length cDNA collection
    • Numata K, Kanai A, Saito R, Kondo S, Adachi J, et al. (2003) Identification of putative noncoding RNAs among the RIKEN mouse full-length cDNA collection. Genome Res 13: 1301-1306.
    • (2003) Genome Res , vol.13 , pp. 1301-1306
    • Numata, K.1    Kanai, A.2    Saito, R.3    Kondo, S.4    Adachi, J.5
  • 18
    • 30044434769 scopus 로고    scopus 로고
    • Experimental validation of the regulated expression of large numbers of noncoding RNAs from the mouse genome
    • Ravasi T, Suzuki H, Pang KC, Katayama S, Furuno M, et al. (2006) Experimental validation of the regulated expression of large numbers of noncoding RNAs from the mouse genome. Genome Res 16: 11-19.
    • (2006) Genome Res , vol.16 , pp. 11-19
    • Ravasi, T.1    Suzuki, H.2    Pang, K.C.3    Katayama, S.4    Furuno, M.5
  • 19
    • 62249133709 scopus 로고    scopus 로고
    • Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
    • Guttman M, Amit I, Garber M, French C, Lin MF, et al. (2009) Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature 458: 223-227.
    • (2009) Nature , vol.458 , pp. 223-227
    • Guttman, M.1    Amit, I.2    Garber, M.3    French, C.4    Lin, M.F.5
  • 20
    • 57849109058 scopus 로고    scopus 로고
    • Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
    • Core LJ, Waterfall JJ, Lis JT (2008) Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 322: 1845-1848.
    • (2008) Science , vol.322 , pp. 1845-1848
    • Core, L.J.1    Waterfall, J.J.2    Lis, J.T.3
  • 21
    • 57849123049 scopus 로고    scopus 로고
    • RNA exosome depletion reveals transcription upstream of active human promoters
    • Preker P, Nielsen J, Kammler S, Lykke-Andersen S, Christensen MS, et al. (2008) RNA exosome depletion reveals transcription upstream of active human promoters. Science 322: 1851-1854.
    • (2008) Science , vol.322 , pp. 1851-1854
    • Preker, P.1    Nielsen, J.2    Kammler, S.3    Lykke-Andersen, S.4    Christensen, M.S.5
  • 22
    • 60549115605 scopus 로고    scopus 로고
    • Post-transcriptional processing generates a diversity of 59-modified long and short RNAs
    • Fejes-Toth K, Sotirova V, Sachidanandam R, Assaf G, Hannon GJ, et al. (2009) Post-transcriptional processing generates a diversity of 59-modified long and short RNAs. Nature 457: 1028-1032.
    • (2009) Nature , vol.457 , pp. 1028-1032
    • Fejes-Toth, K.1    Sotirova, V.2    Sachidanandam, R.3    Assaf, G.4    Hannon, G.J.5
  • 23
    • 67349157682 scopus 로고    scopus 로고
    • Tiny RNAs associated with transcription start sites in animals
    • Taft RJ, Glazov EA, Cloonan N, Simons C, Stephen S, et al. (2009) Tiny RNAs associated with transcription start sites in animals. Nat Genet 41: 572-578.
    • (2009) Nat Genet , vol.41 , pp. 572-578
    • Taft, R.J.1    Glazov, E.A.2    Cloonan, N.3    Simons, C.4    Stephen, S.5
  • 25
    • 16544380610 scopus 로고    scopus 로고
    • Mouse transcriptome: Neutral evolution of "non-coding" complementary DNAs
    • following 757; discussion following 757
    • Wang J, Zhang J, Zheng H, Li J, Liu D, et al. (2004) Mouse transcriptome: neutral evolution of "non-coding" complementary DNAs. Nature 431: 1 p following 757; discussion following 757.
    • (2004) Nature , vol.431 , pp. 1
    • Wang, J.1    Zhang, J.2    Zheng, H.3    Li, J.4    Liu, D.5
  • 26
    • 17644382616 scopus 로고    scopus 로고
    • Waste not, want not-transcript excess in multicellular eukaryotes
    • Brosius J (2005) Waste not, want not-transcript excess in multicellular eukaryotes. Trends Genet 21: 287-288.
    • (2005) Trends Genet , vol.21 , pp. 287-288
    • Brosius, J.1
  • 28
    • 22144467302 scopus 로고    scopus 로고
    • Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping
    • Royce TE, Rozowsky JS, Bertone P, Samanta M, Stolc V, et al. (2005) Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping. Trends Genet 21: 466-475.
    • (2005) Trends Genet , vol.21 , pp. 466-475
    • Royce, T.E.1    Rozowsky, J.S.2    Bertone, P.3    Samanta, M.4    Stolc, V.5
  • 29
    • 57749195712 scopus 로고    scopus 로고
    • RNA-Seq: A revolutionary tool for transcriptomics
    • Wang Z, Gerstein M, Snyder M (2009) RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 10: 57-63.
    • (2009) Nat Rev Genet , vol.10 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 31
    • 46249096804 scopus 로고    scopus 로고
    • Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
    • Wilhelm BT, Marguerat S, Watt S, Schubert F, Wood V, et al. (2008) Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution. Nature 453: 1239-1243.
    • (2008) Nature , vol.453 , pp. 1239-1243
    • Wilhelm, B.T.1    Marguerat, S.2    Watt, S.3    Schubert, F.4    Wood, V.5
  • 32
    • 70449723389 scopus 로고    scopus 로고
    • Establishing legitimacy and function in the new transcriptome
    • van Bakel H, Hughes TR (2009) Establishing legitimacy and function in the new transcriptome. Brief Funct Genomic Proteomic 8: 424-436.
    • (2009) Brief Funct Genomic Proteomic , vol.8 , pp. 424-436
    • van Bakel, H.1    Hughes, T.R.2
  • 33
    • 42749087226 scopus 로고    scopus 로고
    • Highly integrated single-base resolution maps of the epigenome in Arabidopsis
    • Lister R, O'Malley RC, Tonti-Filippini J, Gregory BD, Berry CC, et al. (2008) Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell 133: 523-536.
    • (2008) Cell , vol.133 , pp. 523-536
    • Lister, R.1    O'Malley, R.C.2    Tonti-Filippini, J.3    Gregory, B.D.4    Berry, C.C.5
  • 34
    • 45549088326 scopus 로고    scopus 로고
    • The transcriptional landscape of the yeast genome defined by RNA sequencing
    • Nagalakshmi U, Wang Z, Waern K, Shou C, Raha D, et al. (2008) The transcriptional landscape of the yeast genome defined by RNA sequencing. Science 320: 1344-1349.
    • (2008) Science , vol.320 , pp. 1344-1349
    • Nagalakshmi, U.1    Wang, Z.2    Waern, K.3    Shou, C.4    Raha, D.5
  • 35
    • 69549112743 scopus 로고    scopus 로고
    • Digital transcriptome profiling using selective hexamer priming for cDNA synthesis
    • Armour CD, Castle JC, Chen R, Babak T, Loerch P, et al. (2009) Digital transcriptome profiling using selective hexamer priming for cDNA synthesis. Nat Methods 6: 647-649.
    • (2009) Nat Methods , vol.6 , pp. 647-649
    • Armour, C.D.1    Castle, J.C.2    Chen, R.3    Babak, T.4    Loerch, P.5
  • 37
    • 47649124124 scopus 로고    scopus 로고
    • A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
    • Sultan M, Schulz MH, Richard H, Magen A, Klingenhoff A, et al. (2008) A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. Science 321: 956-960.
    • (2008) Science , vol.321 , pp. 956-960
    • Sultan, M.1    Schulz, M.H.2    Richard, H.3    Magen, A.4    Klingenhoff, A.5
  • 40
    • 48949092575 scopus 로고    scopus 로고
    • A genomic analysis of RNA polymerase II modification and chromatin architecture related to 39 end RNA polyadenylation
    • Lian Z, Karpikov A, Lian J, Mahajan MC, Hartman S, et al. (2008) A genomic analysis of RNA polymerase II modification and chromatin architecture related to 39 end RNA polyadenylation. Genome Res 18: 1224-1237.
    • (2008) Genome Res , vol.18 , pp. 1224-1237
    • Lian, Z.1    Karpikov, A.2    Lian, J.3    Mahajan, M.C.4    Hartman, S.5
  • 42
    • 33748690573 scopus 로고    scopus 로고
    • PET-Tool: A software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data
    • Chiu KP, Wong CH, Chen Q, Ariyaratne P, Ooi HS, et al. (2006) PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data. BMC Bioinformatics 7: 390.
    • (2006) BMC Bioinformatics , vol.7 , pp. 390
    • Chiu, K.P.1    Wong, C.H.2    Chen, Q.3    Ariyaratne, P.4    Ooi, H.S.5
  • 44
    • 67749114140 scopus 로고    scopus 로고
    • Distinctive chromatin in human sperm packages genes for embryo development
    • Hammoud SS, Nix DA, Zhang H, Purwar J, Carrell DT, et al. (2009) Distinctive chromatin in human sperm packages genes for embryo development. Nature 460: 473-478.
    • (2009) Nature , vol.460 , pp. 473-478
    • Hammoud, S.S.1    Nix, D.A.2    Zhang, H.3    Purwar, J.4    Carrell, D.T.5
  • 45
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • Trapnell C, Pachter L, Salzberg SL (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 46
    • 77950461601 scopus 로고    scopus 로고
    • Origins and functional impact of copy number variation in the human genome
    • Conrad DF, Pinto D, Redon R, Feuk L, Gokcumen O, et al. (2010) Origins and functional impact of copy number variation in the human genome. Nature 464: 704-12.
    • (2010) Nature , vol.464 , pp. 704-712
    • Conrad, D.F.1    Pinto, D.2    Redon, R.3    Feuk, L.4    Gokcumen, O.5
  • 48
    • 33646272409 scopus 로고    scopus 로고
    • Identification and classification of conserved RNA secondary structures in the human genome
    • doi:10.1371/journal. pcbi.0020033
    • Pedersen JS, Bejerano G, Siepel A, Rosenbloom K, Lindblad-Toh K, et al. (2006) Identification and classification of conserved RNA secondary structures in the human genome. PLoS Comput Biol 2: e33. doi:10.1371/journal. pcbi.0020033.
    • (2006) PLoS Comput Biol , vol.2
    • Pedersen, J.S.1    Bejerano, G.2    Siepel, A.3    Rosenbloom, K.4    Lindblad-Toh, K.5
  • 49
    • 27944464131 scopus 로고    scopus 로고
    • Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome
    • Washietl S, Hofacker IL, Lukasser M, Huttenhofer A, Stadler PF (2005) Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. Nat Biotechnol 23: 1383-1390.
    • (2005) Nat Biotechnol , vol.23 , pp. 1383-1390
    • Washietl, S.1    Hofacker, I.L.2    Lukasser, M.3    Huttenhofer, A.4    Stadler, P.F.5
  • 50
    • 0344272073 scopus 로고
    • The "beta-like-globin" gene domain in human erythroid cells
    • Tuan D, Solomon W, Li Q, London IM (1985) The "beta-like-globin" gene domain in human erythroid cells. Proc Natl Acad Sci U S A 82: 6384-6388.
    • (1985) Proc Natl Acad Sci U S A , vol.82 , pp. 6384-6388
    • Tuan, D.1    Solomon, W.2    Li, Q.3    London, I.M.4
  • 52
    • 0023899769 scopus 로고
    • Nuclease hypersensitive sites in chromatin
    • Gross DS, Garrard WT (1988) Nuclease hypersensitive sites in chromatin. Annu Rev Biochem 57: 159-197.
    • (1988) Annu Rev Biochem , vol.57 , pp. 159-197
    • Gross, D.S.1    Garrard, W.T.2
  • 53
    • 10044264270 scopus 로고    scopus 로고
    • Discovery of functional noncoding elements by digital analysis of chromatin structure
    • Sabo PJ, Hawrylycz M, Wallace JC, Humbert R, Yu M, et al. (2004) Discovery of functional noncoding elements by digital analysis of chromatin structure. Proc Natl Acad Sci U S A 101: 16837-16842.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 16837-16842
    • Sabo, P.J.1    Hawrylycz, M.2    Wallace, J.C.3    Humbert, R.4    Yu, M.5
  • 55
    • 34547582418 scopus 로고    scopus 로고
    • CPC: Assess the protein-coding potential of transcripts using sequence features and support vector machine
    • Kong L, Zhang Y, Ye ZQ, Liu XQ, Zhao SQ, et al. (2007) CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine. Nucleic Acids Res 35: W345-W349.
    • (2007) Nucleic Acids Res , vol.35
    • Kong, L.1    Zhang, Y.2    Ye, Z.Q.3    Liu, X.Q.4    Zhao, S.Q.5
  • 56
    • 34547147926 scopus 로고    scopus 로고
    • Analysis of transcriptional activation at a distance in Saccharomyces cerevisiae
    • Dobi KC, Winston F (2007) Analysis of transcriptional activation at a distance in Saccharomyces cerevisiae. Mol Cell Biol 27: 5575-5586.
    • (2007) Mol Cell Biol , vol.27 , pp. 5575-5586
    • Dobi, K.C.1    Winston, F.2
  • 57
    • 65649092633 scopus 로고    scopus 로고
    • The genetic signatures of noncoding RNAs
    • e1000459, doi:10.1371/journal.pgen.1000459
    • Mattick JS (2009) The genetic signatures of noncoding RNAs. PLoS Genet 5: e1000459. doi:10.1371/journal.pgen.1000459.
    • (2009) PLoS Genet , vol.5
    • Mattick, J.S.1
  • 58
    • 60349120914 scopus 로고    scopus 로고
    • Long non-coding RNAs: Insights into functions
    • Mercer TR, Dinger ME, Mattick JS (2009) Long non-coding RNAs: insights into functions. Nat Rev Genet 10: 155-159.
    • (2009) Nat Rev Genet , vol.10 , pp. 155-159
    • Mercer, T.R.1    Dinger, M.E.2    Mattick, J.S.3
  • 59
    • 0036226603 scopus 로고    scopus 로고
    • BLAT-the BLAST-like alignment tool
    • Kent WJ (2002) BLAT-the BLAST-like alignment tool. Genome Res 12: 656-664.
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 60
    • 53749083993 scopus 로고    scopus 로고
    • SeqMap: Mapping massive amount of oligonucleotides to the genome
    • Jiang H, Wong WH (2008) SeqMap: mapping massive amount of oligonucleotides to the genome. Bioinformatics 24: 2395-2396.
    • (2008) Bioinformatics , vol.24 , pp. 2395-2396
    • Jiang, H.1    Wong, W.H.2
  • 61
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memoryefficient alignment of short DNA sequences to the human genome
    • Langmead B, Trapnell C, Pop M, Salzberg SL (2009) Ultrafast and memoryefficient alignment of short DNA sequences to the human genome. Genome Biol 10: R25.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1    Trapnell, C.2    Pop, M.3    Salzberg, S.L.4
  • 62
    • 23744458086 scopus 로고    scopus 로고
    • Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
    • Siepel A, Bejerano G, Pedersen JS, Hinrichs AS, Hou M, et al. (2005) Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Res 15: 1034-1050.
    • (2005) Genome Res , vol.15 , pp. 1034-1050
    • Siepel, A.1    Bejerano, G.2    Pedersen, J.S.3    Hinrichs, A.S.4    Hou, M.5
  • 63
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J Roy Statist Soc B 57: 289-300.
    • (1995) J Roy Statist Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 64
    • 28744458859 scopus 로고    scopus 로고
    • Bioconductor: Open software development for computational biology and bioinformatics
    • Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, et al. (2004) Bioconductor: open software development for computational biology and bioinformatics. Genome Biol 5: R80.
    • (2004) Genome Biol , vol.5
    • Gentleman, R.C.1    Carey, V.J.2    Bates, D.M.3    Bolstad, B.4    Dettling, M.5
  • 66
    • 60149091656 scopus 로고    scopus 로고
    • ChIP-seq accurately predicts tissue-specific activity of enhancers
    • Visel A, Blow MJ, Li Z, Zhang T, Akiyama JA, et al. (2009) ChIP-seq accurately predicts tissue-specific activity of enhancers. Nature 457: 854-858.
    • (2009) Nature , vol.457 , pp. 854-858
    • Visel, A.1    Blow, M.J.2    Li, Z.3    Zhang, T.4    Akiyama, J.A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.