-
1
-
-
2442511938
-
The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation
-
Adams,M. J., Antoniw, J. F., Bar-Joseph, M., Brunt, A. A., Candresse, T., Foster, G. D., Martelli, G. P., Milne, R. G. & Fauquet, C. M. (2004). The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Arch Virol 149, 1045-1060.
-
(2004)
Arch Virol
, vol.149
, pp. 1045-1060
-
-
Adams, M.J.1
Antoniw, J.F.2
Bar-Joseph, M.3
Brunt, A.A.4
Candresse, T.5
Foster, G.D.6
Martelli, G.P.7
Milne, R.G.8
Fauquet, C.M.9
-
2
-
-
73149105641
-
-
Adams, M. J., Accotto, G. P., Agranovsky, A. A., Bar-Joseph, M., Boscia, D., Brunt, A. A., Candresse, T., Coutts, R. H. A., Dolja, V. V. & other authors (2005). Family Flexiviridae. In Virus Taxonomy. Eighth Report of the International Committee on Taxonomy of Viruses, pp. 1089-1124. Edited by C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball. Amsterdam: Elservier.
-
Adams, M. J., Accotto, G. P., Agranovsky, A. A., Bar-Joseph, M., Boscia, D., Brunt, A. A., Candresse, T., Coutts, R. H. A., Dolja, V. V. & other authors (2005). Family Flexiviridae. In Virus Taxonomy. Eighth Report of the International Committee on Taxonomy of Viruses, pp. 1089-1124. Edited by C. M. Fauquet, M. A. Mayo, J. Maniloff, U. Desselberger & L. A. Ball. Amsterdam: Elservier.
-
-
-
-
3
-
-
64849095739
-
Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus
-
Al Rwahnih, M., Daubert, S., Golino, D. & Rowhani, A. (2009). Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus. Virology 387, 395-401.
-
(2009)
Virology
, vol.387
, pp. 395-401
-
-
Al Rwahnih, M.1
Daubert, S.2
Golino, D.3
Rowhani, A.4
-
4
-
-
26244462315
-
Grapevine rupestris stem pitting-associated virus is linked with grapevine necrosis
-
Bouyahia, H., Boscia, D., Savino, V., La Notte, P., Pirolo, C., Castellano, M. A., Minafra, A. & Martelli, G. P. (2005). Grapevine rupestris stem pitting-associated virus is linked with grapevine necrosis. Vitis 44, 133-137.
-
(2005)
Vitis
, vol.44
, pp. 133-137
-
-
Bouyahia, H.1
Boscia, D.2
Savino, V.3
La Notte, P.4
Pirolo, C.5
Castellano, M.A.6
Minafra, A.7
Martelli, G.P.8
-
5
-
-
0032408626
-
Contribution of Taq polymerase-induced errors to the estimation of RNA virus diversity
-
Bracho, M. A., Moya, A. & Barrio, E. (1998). Contribution of Taq polymerase-induced errors to the estimation of RNA virus diversity. J Gen Virol 79, 2921-2928.
-
(1998)
J Gen Virol
, vol.79
, pp. 2921-2928
-
-
Bracho, M.A.1
Moya, A.2
Barrio, E.3
-
6
-
-
36448969030
-
Topological variation in single-gene phylogenetic trees
-
doi:10.1186/ gb-2007-8-6-216
-
Castresana, J. (2007). Topological variation in single-gene phylogenetic trees. Genome Biol 8. doi:10.1186/ gb-2007-8-6-216.
-
(2007)
Genome Biol
, vol.8
-
-
Castresana, J.1
-
7
-
-
5444273530
-
Selection pressures in the capsid genes of plant RNA viruses reflect mode of transmission
-
Chare, E. R. & Holmes, E. C. (2004). Selection pressures in the capsid genes of plant RNA viruses reflect mode of transmission. J Gen Virol 85, 3149-3157.
-
(2004)
J Gen Virol
, vol.85
, pp. 3149-3157
-
-
Chare, E.R.1
Holmes, E.C.2
-
8
-
-
33645972304
-
A phylogenetic survey of recombination frequency in plant RNA viruses
-
Chare, E. R. & Holmes, E. C. (2006). A phylogenetic survey of recombination frequency in plant RNA viruses. Arch Virol 151, 933-946.
-
(2006)
Arch Virol
, vol.151
, pp. 933-946
-
-
Chare, E.R.1
Holmes, E.C.2
-
9
-
-
0030735651
-
Characterization of grapevine rugose wood disease sources from Italy
-
Credi, R. (1997). Characterization of grapevine rugose wood disease sources from Italy. Plant Dis 81, 1288-1292.
-
(1997)
Plant Dis
, vol.81
, pp. 1288-1292
-
-
Credi, R.1
-
10
-
-
0034109901
-
Contribution of uneven distribution of genomic RNA variants of Citrus tristeza virus (CTV) within the plant to changes in the viral population following aphid transmission
-
d'Urso, F., Ayllón, M. A., Rubio, L., Sambade, A., Hermoso de Mendoza, A., Guerri, J. & Moreno, P. (2000). Contribution of uneven distribution of genomic RNA variants of Citrus tristeza virus (CTV) within the plant to changes in the viral population following aphid transmission. Plant Pathol 49, 288-294.
-
(2000)
Plant Pathol
, vol.49
, pp. 288-294
-
-
d'Urso, F.1
Ayllón, M.A.2
Rubio, L.3
Sambade, A.4
Hermoso de Mendoza, A.5
Guerri, J.6
Moreno, P.7
-
11
-
-
38049129814
-
Variability of the coat protein gene of Grapevine leafroll-associated virus 3 in Brazil
-
Fajardo, T. V. M., Dianese, É. C., Eiras, M., Cerqueira, D.M., Lopes, D. B., Ferreira, M. A. S. V. & Martins, C. R. F. (2007). Variability of the coat protein gene of Grapevine leafroll-associated virus 3 in Brazil. Fitopatol Bras 32, 335-340.
-
(2007)
Fitopatol Bras
, vol.32
, pp. 335-340
-
-
Fajardo, T.V.M.1
Dianese, E.C.2
Eiras, M.3
Cerqueira, D.M.4
Lopes, D.B.5
Ferreira, M.A.S.V.6
Martins, C.R.F.7
-
12
-
-
0027453041
-
Statistical tests of neutrality of mutations
-
Fu, Y. X. & Li, W. H. (1993). Statistical tests of neutrality of mutations. Genetics 133, 693-709.
-
(1993)
Genetics
, vol.133
, pp. 693-709
-
-
Fu, Y.X.1
Li, W.H.2
-
13
-
-
0034798786
-
Variability and genetic structure of plant virus populations
-
García-Arenal, F., Fraile, A. & Malpica, J. M. (2001). Variability and genetic structure of plant virus populations. Annu Rev Phytopathol 39, 157-186.
-
(2001)
Annu Rev Phytopathol
, vol.39
, pp. 157-186
-
-
García-Arenal, F.1
Fraile, A.2
Malpica, J.M.3
-
14
-
-
33644770591
-
Distribution of Rupestris stem-pitting-associated virus variants in two Australian vineyards showing different symptoms
-
Habili, N., Farrokhi, N., Lima, M. F., Nicholas, P. & Randles, J. W. (2006). Distribution of Rupestris stem-pitting-associated virus variants in two Australian vineyards showing different symptoms. Ann Appl Biol 148, 91-96.
-
(2006)
Ann Appl Biol
, vol.148
, pp. 91-96
-
-
Habili, N.1
Farrokhi, N.2
Lima, M.F.3
Nicholas, P.4
Randles, J.W.5
-
15
-
-
0032824130
-
Population bottlenecks and patterns of human polymorphism
-
Hey, J. & Harris, E. E. (1999). Population bottlenecks and patterns of human polymorphism. Mol Biol Evol 16, 1423-1426.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 1423-1426
-
-
Hey, J.1
Harris, E.E.2
-
16
-
-
36448938389
-
-
Huerta-Cepas, J., Dopazo, H., Dopazo, J. & Gabaldo' n, T. (2007). The human phylome. Genome Biol 8, R109.
-
Huerta-Cepas, J., Dopazo, H., Dopazo, J. & Gabaldo' n, T. (2007). The human phylome. Genome Biol 8, R109.
-
-
-
-
17
-
-
33645850710
-
Phylogenomics: The beginning of incongruence?
-
Jeffroy, O., Brinkmann, H., Delsuc, F. & Philippe, H. (2006). Phylogenomics: the beginning of incongruence? Trends Genet 22, 225-231.
-
(2006)
Trends Genet
, vol.22
, pp. 225-231
-
-
Jeffroy, O.1
Brinkmann, H.2
Delsuc, F.3
Philippe, H.4
-
18
-
-
33144462048
-
Distinct viral populations differentiate and evolve independently in a single perennial host plant
-
Jridi, C., Martin, J.-F., Marie-Jeanne, V., Labonne, G. & Blanc, S. (2006). Distinct viral populations differentiate and evolve independently in a single perennial host plant. J Virol 80, 2349-2357.
-
(2006)
J Virol
, vol.80
, pp. 2349-2357
-
-
Jridi, C.1
Martin, J.-F.2
Marie-Jeanne, V.3
Labonne, G.4
Blanc, S.5
-
19
-
-
0028624703
-
Evidence of two groups of Banana bunchy top virus isolates
-
Karan, M., Harding, R. M. & Dale, J. L. (1994). Evidence of two groups of Banana bunchy top virus isolates. J Gen Virol 75, 3541-3546.
-
(1994)
J Gen Virol
, vol.75
, pp. 3541-3546
-
-
Karan, M.1
Harding, R.M.2
Dale, J.L.3
-
20
-
-
0019296687
-
A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
-
Kimura, M. (1980). A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
21
-
-
33846810867
-
Effect of virus combinations on the performance of Vitis vinifera var. Chardonnay
-
Stellenbosch, South Africa, April 3-7
-
Komar, V., Vigne, E., Demangeat, G., Cornuet, P. & Fuchs, M. (2006). Effect of virus combinations on the performance of Vitis vinifera var. Chardonnay. In Extended abstracts of the XV meeting of the International Council for the Study of Viruses and Virus-like Diseases of the Grapevine, Stellenbosch, South Africa, April 3-7 2006, pp. 134-135.
-
(2006)
Extended abstracts of the XV meeting of the International Council for the Study of Viruses and Virus-like Diseases of the Grapevine
, pp. 134-135
-
-
Komar, V.1
Vigne, E.2
Demangeat, G.3
Cornuet, P.4
Fuchs, M.5
-
22
-
-
0027504136
-
Evolution and taxonomy of positive-strand RNA viruses: Implications of comparative analysis of amino acid sequences
-
Koonin, E. V. & Dolja, V. V. (1993). Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit Rev Biochem Mol Biol 28, 375-430.
-
(1993)
Crit Rev Biochem Mol Biol
, vol.28
, pp. 375-430
-
-
Koonin, E.V.1
Dolja, V.V.2
-
23
-
-
73149093144
-
-
Korber, B. (2000). HIV signatures and similarities. In Computational and Evolutionary Analysis of HIV Molecular Sequences, pp. 55-72. Edited by A. G. Rodrigo & G. H. Learn, Jr. Dordrecht, The Netherlands: Kluwer Academic Publishers.
-
Korber, B. (2000). HIV signatures and similarities. In Computational and Evolutionary Analysis of HIV Molecular Sequences, pp. 55-72. Edited by A. G. Rodrigo & G. H. Learn, Jr. Dordrecht, The Netherlands: Kluwer Academic Publishers.
-
-
-
-
24
-
-
33747106695
-
Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines
-
Lima, M. F., Alkowni, R., Uyemoto, J. K., Golino, D., Osman, F. & Rowhani, A. (2006). Molecular analysis of a California strain of Rupestris stem pitting-associated virus isolated from declining Syrah grapevines. Arch Virol 151, 1889-1894.
-
(2006)
Arch Virol
, vol.151
, pp. 1889-1894
-
-
Lima, M.F.1
Alkowni, R.2
Uyemoto, J.K.3
Golino, D.4
Osman, F.5
Rowhani, A.6
-
25
-
-
73149102235
-
Seed transmission of Rupestris stem pitting associated virus in grapevine
-
Davis, USA, July 18-20
-
Lima, M. F., Golino, D. A. & Rowhani, A. (2007). Seed transmission of Rupestris stem pitting associated virus in grapevine. In Proceedings of the 1st Annual National Viticulture Research Conference, University of California, Davis, USA, July 18-20 2007, pp. 61-62.
-
(2007)
Proceedings of the 1st Annual National Viticulture Research Conference, University of California
, pp. 61-62
-
-
Lima, M.F.1
Golino, D.A.2
Rowhani, A.3
-
26
-
-
0025788241
-
High-fidelity amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus
-
Lundberg, K. S., Shoemaker, D. D., Adams, M. W., Short, J. M., Sorge, J. A. & Mathur, E. J. (1991). High-fidelity amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus. Gene 108, 1-6.
-
(1991)
Gene
, vol.108
, pp. 1-6
-
-
Lundberg, K.S.1
Shoemaker, D.D.2
Adams, M.W.3
Short, J.M.4
Sorge, J.A.5
Mathur, E.J.6
-
27
-
-
0032952628
-
Single-strand conformation polymorphism analysis of Apple stem grooving capillovirus sequence variants
-
Magome, H., Yoshikawa, N. & Takahashi, T. (1999). Single-strand conformation polymorphism analysis of Apple stem grooving capillovirus sequence variants. Phytopathology 89, 136-140.
-
(1999)
Phytopathology
, vol.89
, pp. 136-140
-
-
Magome, H.1
Yoshikawa, N.2
Takahashi, T.3
-
28
-
-
0033974998
-
A novel superfamily of predicted cysteine proteases from eukaryotes, viruses and Chlamydia pneumoniae
-
Makarova, K. S., Aravind, L. & Koonin, E. V. (2000). A novel superfamily of predicted cysteine proteases from eukaryotes, viruses and Chlamydia pneumoniae. Trends Biochem Sci 25, 50-52.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 50-52
-
-
Makarova, K.S.1
Aravind, L.2
Koonin, E.V.3
-
29
-
-
0002750009
-
Rugose wood complex
-
Edited by G. P. Martelli. Rome, Italy: Food and Agriculture Organization of the United Nations
-
Martelli, G. P. (1993). Rugose wood complex. In Graft-Transmissible Diseases of Grapevines, Handbook for Detection and Diagnosis, pp. 45-54. Edited by G. P. Martelli. Rome, Italy: Food and Agriculture Organization of the United Nations.
-
(1993)
Graft-Transmissible Diseases of Grapevines, Handbook for Detection and Diagnosis
, pp. 45-54
-
-
Martelli, G.P.1
-
30
-
-
0031903580
-
Foveavirus, a new plant virus genus
-
Martelli, G. P. & Jelkmann, W. (1998). Foveavirus, a new plant virus genus. Arch Virol 143, 1245-1249.
-
(1998)
Arch Virol
, vol.143
, pp. 1245-1249
-
-
Martelli, G.P.1
Jelkmann, W.2
-
31
-
-
34848823671
-
Family Flexiviridae: A case study in virion and genome plasticity
-
Martelli, G. P., Adams, M. J., Kreuze, J. F. & Dolja, V. V. (2007). Family Flexiviridae: a case study in virion and genome plasticity. Annu Rev Phytopathol 45, 73-100.
-
(2007)
Annu Rev Phytopathol
, vol.45
, pp. 73-100
-
-
Martelli, G.P.1
Adams, M.J.2
Kreuze, J.F.3
Dolja, V.V.4
-
32
-
-
13444251528
-
RDP2: Recombination detection and analysis from sequence alignments
-
Martin, D. P., Williamson, C. & Posada, D. (2005). RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21, 260-262.
-
(2005)
Bioinformatics
, vol.21
, pp. 260-262
-
-
Martin, D.P.1
Williamson, C.2
Posada, D.3
-
33
-
-
0031818131
-
Nucleotide sequence and genome structure of grapevine rupestris stem pitting associated virus- 1 reveal similarities to apple stem pitting virus
-
Meng, B., Pang, S. Z., Forsline, P. L., McFerson, J. R. & Gonsalves, D. (1998). Nucleotide sequence and genome structure of grapevine rupestris stem pitting associated virus- 1 reveal similarities to apple stem pitting virus. J Gen Virol 79, 2059-2069.
-
(1998)
J Gen Virol
, vol.79
, pp. 2059-2069
-
-
Meng, B.1
Pang, S.Z.2
Forsline, P.L.3
McFerson, J.R.4
Gonsalves, D.5
-
34
-
-
0032902103
-
Rupestris stem pitting associated virus-1 is consistently detected in grapevines that are infected with rupestris stem pitting
-
Meng, B., Johnson, R., Peressini, S., Forsline, P. L. & Gonsalves, D. (1999). Rupestris stem pitting associated virus-1 is consistently detected in grapevines that are infected with rupestris stem pitting. Eur J Plant Pathol 105, 191-199.
-
(1999)
Eur J Plant Pathol
, vol.105
, pp. 191-199
-
-
Meng, B.1
Johnson, R.2
Peressini, S.3
Forsline, P.L.4
Gonsalves, D.5
-
35
-
-
33744819983
-
Genetic diversity analyses of grapevine Rupestris stem pitting-associated virus reveal distinct population structures in scion versus rootstock varieties
-
Meng, B., Rebelo, A. R. & Fisher, H. (2006). Genetic diversity analyses of grapevine Rupestris stem pitting-associated virus reveal distinct population structures in scion versus rootstock varieties. J Gen Virol 87, 1725-1733.
-
(2006)
J Gen Virol
, vol.87
, pp. 1725-1733
-
-
Meng, B.1
Rebelo, A.R.2
Fisher, H.3
-
36
-
-
29144433211
-
An overview of rugose wood-associated viruses: 2000-2003
-
Italy, pp
-
Minafra, A. & Boscia, D. (2003). An overview of rugose wood-associated viruses: 2000-2003. In The 14th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine, Locorotondo, Italy, pp. 116-119.
-
(2003)
The 14th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine, Locorotondo
, pp. 116-119
-
-
Minafra, A.1
Boscia, D.2
-
37
-
-
0033776294
-
Serological detection of Grapevine Rupestris stem pitting-associated virus (GRSPaV) by a polyclonal antiserum to recombinant virus coat protein
-
Minafra, A., Casati, P., Elicio, V., Rowhani, A., Saldarelli, P., Savino, V. & Martelli, G. P. (2000). Serological detection of Grapevine Rupestris stem pitting-associated virus (GRSPaV) by a polyclonal antiserum to recombinant virus coat protein. Vitis 39, 115-118.
-
(2000)
Vitis
, vol.39
, pp. 115-118
-
-
Minafra, A.1
Casati, P.2
Elicio, V.3
Rowhani, A.4
Saldarelli, P.5
Savino, V.6
Martelli, G.P.7
-
38
-
-
70449683510
-
Single and mixed infections of Grapevine leafroll-associated viruses in Washington State vineyards
-
Naidu, R. A., Soule, M. J. & Jarugula, S. (2006). Single and mixed infections of Grapevine leafroll-associated viruses in Washington State vineyards. Phytopathology 96, S83.
-
(2006)
Phytopathology
, vol.96
-
-
Naidu, R.A.1
Soule, M.J.2
Jarugula, S.3
-
39
-
-
41149178489
-
Detection of viruses associated with rugose wood in Japanese grapevines and analysis of genomic variability of Rupestris stem pitting-associated virus
-
Nakaune, R., Inoue, K., Nasu, H., Kakogawa, K., Nitta, H., Imada, J. & Nakano, M. (2008). Detection of viruses associated with rugose wood in Japanese grapevines and analysis of genomic variability of Rupestris stem pitting-associated virus. J Gen Plant Pathol 74, 156-163.
-
(2008)
J Gen Plant Pathol
, vol.74
, pp. 156-163
-
-
Nakaune, R.1
Inoue, K.2
Nasu, H.3
Kakogawa, K.4
Nitta, H.5
Imada, J.6
Nakano, M.7
-
41
-
-
29144466432
-
Rupestris stem pitting associated virus isolates are composed by mixtures of genomic variants which share a highly conserved coat protein
-
Nolasco, G., Santos, C., Petrovic, N., Teixeira Santos, M., Cortez, I., Fonseca, F., Boben, J., Nazare Pereira, A. M. & Sequeria, O. (2006). Rupestris stem pitting associated virus isolates are composed by mixtures of genomic variants which share a highly conserved coat protein. Arch Virol 151, 83-96.
-
(2006)
Arch Virol
, vol.151
, pp. 83-96
-
-
Nolasco, G.1
Santos, C.2
Petrovic, N.3
Teixeira Santos, M.4
Cortez, I.5
Fonseca, F.6
Boben, J.7
Nazare Pereira, A.M.8
Sequeria, O.9
-
42
-
-
0019951634
-
Testing the theory of evolution by comparing phylogenetic trees constructed from five different protein sequences
-
Penny, D., Foulds, L. R. & Hendy, M. D. (1982). Testing the theory of evolution by comparing phylogenetic trees constructed from five different protein sequences. Nature 297, 197-200.
-
(1982)
Nature
, vol.297
, pp. 197-200
-
-
Penny, D.1
Foulds, L.R.2
Hendy, M.D.3
-
43
-
-
73149101546
-
Distribution of Rupestris stem pitting associated virus in greenhouse and field grown Vitis rupestris St George
-
Adelaide, Australia, March 12-17
-
Petrovic, N., Penev, B., Krastanova, T., Meng, B. & Gonsalves, D. (2000). Distribution of Rupestris stem pitting associated virus in greenhouse and field grown Vitis rupestris St George. In Extended Abstracts of the 13th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine, Adelaide, Australia, March 12-17 2000.
-
(2000)
Extended Abstracts of the 13th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine
-
-
Petrovic, N.1
Penev, B.2
Krastanova, T.3
Meng, B.4
Gonsalves, D.5
-
44
-
-
0035984630
-
Phylogeny and geographical differentiation of zucchini yellow mosaic virus isolates (Potyviridae) based on molecular analysis of the coat protein and part of the cytoplasmic inclusion protein genes
-
Pfosser, M. F. & Baumann, H. (2002). Phylogeny and geographical differentiation of zucchini yellow mosaic virus isolates (Potyviridae) based on molecular analysis of the coat protein and part of the cytoplasmic inclusion protein genes. Arch Virol 147, 1599-1609.
-
(2002)
Arch Virol
, vol.147
, pp. 1599-1609
-
-
Pfosser, M.F.1
Baumann, H.2
-
45
-
-
33846841107
-
Molecular analysis of double-stranded RNAs reveals complex infection of grapevines with multiple viruses
-
Prosser, S. W., Goszczynski, D. E. & Meng, B. (2007). Molecular analysis of double-stranded RNAs reveals complex infection of grapevines with multiple viruses. Virus Res 124, 151-159.
-
(2007)
Virus Res
, vol.124
, pp. 151-159
-
-
Prosser, S.W.1
Goszczynski, D.E.2
Meng, B.3
-
46
-
-
55749101347
-
Subcellular localization of the triple gene block proteins encoded by a Foveavirus infecting grapevines
-
Rebelo, A. R., Niewiadomski, S., Prosser, S. W., Krell, P. & Meng, B. (2008). Subcellular localization of the triple gene block proteins encoded by a Foveavirus infecting grapevines. Virus Res 138, 57-69.
-
(2008)
Virus Res
, vol.138
, pp. 57-69
-
-
Rebelo, A.R.1
Niewiadomski, S.2
Prosser, S.W.3
Krell, P.4
Meng, B.5
-
47
-
-
33751039720
-
Bushes in the tree of life
-
Rokas, A. & Carroll, S. B. (2006). Bushes in the tree of life. PLoS Biol 4, e352.
-
(2006)
PLoS Biol
, vol.4
-
-
Rokas, A.1
Carroll, S.B.2
-
48
-
-
33645290382
-
Simplified sample preparation method and one-tube RT-PCR for grapevine viruses
-
Adelaide, Australia, March 12-17
-
Rowhani, A., Biardi, L., Johnson, R., Saldarelli, P., Zhang, Y. P., Chin, J. & Green, M. (2000a). Simplified sample preparation method and one-tube RT-PCR for grapevine viruses. In Extended Abstracts of the 13th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine, Adelaide, Australia, March 12-17 2000, p. 82.
-
(2000)
Extended Abstracts of the 13th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine
, pp. 82
-
-
Rowhani, A.1
Biardi, L.2
Johnson, R.3
Saldarelli, P.4
Zhang, Y.P.5
Chin, J.6
Green, M.7
-
49
-
-
0011771994
-
Grapevine Rupestris stem pitting associated virus: Population diversity, titer in the host and possible transmission vector
-
Adelaide, Australia, March 12-17
-
Rowhani, A., Zhang, Y. P., Chin, H., Minafra, A., Golino, D. A. & Uyemoto, J. K. (2000b). Grapevine Rupestris stem pitting associated virus: population diversity, titer in the host and possible transmission vector. In Extended Abstracts of the 13th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine, Adelaide, Australia, March 12-17 2000.
-
(2000)
Extended Abstracts of the 13th Meeting of the International Council for the Study of Virus-like Diseases of the Grapevine
-
-
Rowhani, A.1
Zhang, Y.P.2
Chin, H.3
Minafra, A.4
Golino, D.A.5
Uyemoto, J.K.6
-
50
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
Rozas, J., Sanchez-DelBarrio, J. C., Messeguer, X. & Rozas, R. (2003). DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19, 2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sanchez-DelBarrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
51
-
-
0034864956
-
Genetic variation of Citrus tristeza virus isolates from California and Spain: Evidence for mixed infections and recombination
-
Rubio, L., Ayllón, M. A., Kong, P., Fernández, A., Polek, M., Guerri, J., Moreno, P. & Falk, B. W. (2001). Genetic variation of Citrus tristeza virus isolates from California and Spain: evidence for mixed infections and recombination. J Virol 75, 8054-8062.
-
(2001)
J Virol
, vol.75
, pp. 8054-8062
-
-
Rubio, L.1
Ayllón, M.A.2
Kong, P.3
Fernández, A.4
Polek, M.5
Guerri, J.6
Moreno, P.7
Falk, B.W.8
-
52
-
-
0026660413
-
A simple method for estimating and testing minimum-evolution trees
-
Rzhetsky, A. & Nei, M. (1992). A simple method for estimating and testing minimum-evolution trees. Mol Biol Evol 9, 945-967.
-
(1992)
Mol Biol Evol
, vol.9
, pp. 945-967
-
-
Rzhetsky, A.1
Nei, M.2
-
53
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
54
-
-
4544287803
-
Extensive variation of sequence within isolates of Grapevine virus B
-
Shi, B. J., Habilli, N., Gafny, R. & Symons, R. H. (2004). Extensive variation of sequence within isolates of Grapevine virus B. Virus Genes 29, 279-285.
-
(2004)
Virus Genes
, vol.29
, pp. 279-285
-
-
Shi, B.J.1
Habilli, N.2
Gafny, R.3
Symons, R.H.4
-
55
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima, F. (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123, 585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
56
-
-
34547781750
-
-
Tamura, K, Dudley, J, Nei, M. & Kumar, S, 2007, MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599
-
Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
-
-
-
-
57
-
-
27644484673
-
High genetic variability and evidence for plant to plant transfer of Banana mild mosaic virus
-
Teycheney, P. Y., Laboureau, N., Iskre-Caruana, M. L. & Candresse, T. (2005). High genetic variability and evidence for plant to plant transfer of Banana mild mosaic virus. J Gen Virol 86, 3179-3187.
-
(2005)
J Gen Virol
, vol.86
, pp. 3179-3187
-
-
Teycheney, P.Y.1
Laboureau, N.2
Iskre-Caruana, M.L.3
Candresse, T.4
-
58
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
59
-
-
12444284822
-
The molecular population genetics of the Tomato spotted wilt virus (TSWV) genome
-
Tsompana, M., Abad, J., Purugganan, M. & Moyer, J. W. (2005). The molecular population genetics of the Tomato spotted wilt virus (TSWV) genome. Mol Ecol 14, 53-66.
-
(2005)
Mol Ecol
, vol.14
, pp. 53-66
-
-
Tsompana, M.1
Abad, J.2
Purugganan, M.3
Moyer, J.W.4
-
60
-
-
52649089553
-
-
Varsani, A., Shepherd, D. N., Monjane, A. L., Owor, B. E., Erdmann, J. B., Rybicki, E. P., Peterschmitt, M., Briddon, R. W., Markham, P. G. & other authors (2008). Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogen. J Gen Virol 89, 2063-2074.
-
Varsani, A., Shepherd, D. N., Monjane, A. L., Owor, B. E., Erdmann, J. B., Rybicki, E. P., Peterschmitt, M., Briddon, R. W., Markham, P. G. & other authors (2008). Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogen. J Gen Virol 89, 2063-2074.
-
-
-
-
61
-
-
11344264156
-
Evidence of multiple recombination events between two RNA sequence variants within a Citrus tristeza virus isolate
-
Vives, M. C., Rubio, L., Sambade, A., Mirkov, T. E., Moreno, P. & Guerri, J. (2005). Evidence of multiple recombination events between two RNA sequence variants within a Citrus tristeza virus isolate. Virology 331, 232-237.
-
(2005)
Virology
, vol.331
, pp. 232-237
-
-
Vives, M.C.1
Rubio, L.2
Sambade, A.3
Mirkov, T.E.4
Moreno, P.5
Guerri, J.6
-
62
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Watterson, G. A. (1975). On the number of segregating sites in genetical models without recombination. Theor Popul Biol 7, 256-276.
-
(1975)
Theor Popul Biol
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
-
63
-
-
39149122315
-
Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity
-
Weng, Z., Barthelson, R., Gowda, S., Hilf, M. E., Dawson, W. O., Galbraith, D. W. & Xiong, Z. (2007). Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity. PLoS One 2, e917.
-
(2007)
PLoS One
, vol.2
-
-
Weng, Z.1
Barthelson, R.2
Gowda, S.3
Hilf, M.E.4
Dawson, W.O.5
Galbraith, D.W.6
Xiong, Z.7
-
64
-
-
0031759679
-
Nucleotide sequence and RT-PCR detection of a virus associated with grapevine rupestris stem-pitting disease
-
Zhang, Y. P., Uyemoto, J. K., Golino, D. A. & Rowhani, A. (1998). Nucleotide sequence and RT-PCR detection of a virus associated with grapevine rupestris stem-pitting disease. Phytopathology 88, 1231-1237.
-
(1998)
Phytopathology
, vol.88
, pp. 1231-1237
-
-
Zhang, Y.P.1
Uyemoto, J.K.2
Golino, D.A.3
Rowhani, A.4
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