-
1
-
-
33751536642
-
Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms
-
10.1038/sj.embor.7400857, 1794690, 17139297
-
Lapidot M, Pilpel Y. Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms. EMBO Rep 2006, 7(12):1216-1222. 10.1038/sj.embor.7400857, 1794690, 17139297.
-
(2006)
EMBO Rep
, vol.7
, Issue.12
, pp. 1216-1222
-
-
Lapidot, M.1
Pilpel, Y.2
-
2
-
-
0442307970
-
In search of antisense
-
10.1016/j.tibs.2003.12.002, 15102435
-
Lavorgna G, Dahary D, Lehner B, Sorek R, Sanderson CM, Casari G. In search of antisense. Trends Biochem Sci 2004, 29(2):88-94. 10.1016/j.tibs.2003.12.002, 15102435.
-
(2004)
Trends Biochem Sci
, vol.29
, Issue.2
, pp. 88-94
-
-
Lavorgna, G.1
Dahary, D.2
Lehner, B.3
Sorek, R.4
Sanderson, C.M.5
Casari, G.6
-
3
-
-
4644223587
-
Tsix transcription- versus RNA-based mechanisms in Xist repression and epigenetic choice
-
10.1016/j.cub.2004.09.053, 15458646
-
Shibata S, Lee JT. Tsix transcription- versus RNA-based mechanisms in Xist repression and epigenetic choice. Curr Biol 2004, 14(19):1747-1754. 10.1016/j.cub.2004.09.053, 15458646.
-
(2004)
Curr Biol
, vol.14
, Issue.19
, pp. 1747-1754
-
-
Shibata, S.1
Lee, J.T.2
-
4
-
-
0037075032
-
The non-coding Air RNA is required for silencing autosomal imprinted genes
-
Sleutels F, Zwart R, Barlow DP. The non-coding Air RNA is required for silencing autosomal imprinted genes. Nature 2002, 415(6873):810-813.
-
(2002)
Nature
, vol.415
, Issue.6873
, pp. 810-813
-
-
Sleutels, F.1
Zwart, R.2
Barlow, D.P.3
-
5
-
-
17444410031
-
The influence of non-coding RNAs on allele-specific gene expression in mammals
-
Spec No:10.1093/hmg/ddi108, 15809263
-
O'Neill MJ. The influence of non-coding RNAs on allele-specific gene expression in mammals. Hum Mol Genet 2005, 14(Spec No 1):R113-120. 10.1093/hmg/ddi108, 15809263.
-
(2005)
Hum Mol Genet
, vol.14
, Issue.1
-
-
O'Neill, M.J.1
-
6
-
-
54049138948
-
Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation
-
10.1016/j.molcel.2008.08.022, 18951091
-
Pandey RR, Mondal T, Mohammad F, Enroth S, Redrup L, Komorowski J, Nagano T, Mancini-Dinardo D, Kanduri C. Kcnq1ot1 antisense noncoding RNA mediates lineage-specific transcriptional silencing through chromatin-level regulation. Mol Cell 2008, 32(2):232-246. 10.1016/j.molcel.2008.08.022, 18951091.
-
(2008)
Mol Cell
, vol.32
, Issue.2
, pp. 232-246
-
-
Pandey, R.R.1
Mondal, T.2
Mohammad, F.3
Enroth, S.4
Redrup, L.5
Komorowski, J.6
Nagano, T.7
Mancini-Dinardo, D.8
Kanduri, C.9
-
7
-
-
56349112904
-
Global survey of genomic imprinting by transcriptome sequencing
-
10.1016/j.cub.2008.09.044, 19026546
-
Babak T, Deveale B, Armour C, Raymond C, Cleary MA, Kooy D, Johnson JM, Lim LP. Global survey of genomic imprinting by transcriptome sequencing. Curr Biol 2008, 18(22):1735-1741. 10.1016/j.cub.2008.09.044, 19026546.
-
(2008)
Curr Biol
, vol.18
, Issue.22
, pp. 1735-1741
-
-
Babak, T.1
Deveale, B.2
Armour, C.3
Raymond, C.4
Cleary, M.A.5
Kooy, D.6
Johnson, J.M.7
Lim, L.P.8
-
8
-
-
0038581890
-
Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease
-
10.1038/ng1157, 12730694
-
Tufarelli C, Stanley JA, Garrick D, Sharpe JA, Ayyub H, Wood WG, Higgs DR. Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease. Nat Genet 2003, 34(2):157-165. 10.1038/ng1157, 12730694.
-
(2003)
Nat Genet
, vol.34
, Issue.2
, pp. 157-165
-
-
Tufarelli, C.1
Stanley, J.A.2
Garrick, D.3
Sharpe, J.A.4
Ayyub, H.5
Wood, W.G.6
Higgs, D.R.7
-
9
-
-
38049155825
-
Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
-
10.1038/nature06468, 18185590
-
Yu W, Gius D, Onyango P, Muldoon-Jacobs K, Karp J, Feinberg AP, Cui H. Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA. Nature 2008, 451(7175):202-206. 10.1038/nature06468, 18185590.
-
(2008)
Nature
, vol.451
, Issue.7175
, pp. 202-206
-
-
Yu, W.1
Gius, D.2
Onyango, P.3
Muldoon-Jacobs, K.4
Karp, J.5
Feinberg, A.P.6
Cui, H.7
-
10
-
-
29244490062
-
Endogenous siRNAs derived from a pair of natural cis- antisense transcripts regulate salt tolerance in Arabidopsis
-
10.1016/j.cell.2005.11.035, 16377568
-
Borsani O, Zhu J, Verslues PE, Sunkar R, Zhu JK. Endogenous siRNAs derived from a pair of natural cis- antisense transcripts regulate salt tolerance in Arabidopsis. Cell 2005, 123(7):1279-1291. 10.1016/j.cell.2005.11.035, 16377568.
-
(2005)
Cell
, vol.123
, Issue.7
, pp. 1279-1291
-
-
Borsani, O.1
Zhu, J.2
Verslues, P.E.3
Sunkar, R.4
Zhu, J.K.5
-
11
-
-
40249088355
-
Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis
-
10.1186/1471-2199-9-6, 2262095, 18194570
-
Jin H, Vacic V, Girke T, Lonardi S, Zhu JK. Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis. BMC Mol Biol 2008, 9:6. 10.1186/1471-2199-9-6, 2262095, 18194570.
-
(2008)
BMC Mol Biol
, vol.9
, pp. 6
-
-
Jin, H.1
Vacic, V.2
Girke, T.3
Lonardi, S.4
Zhu, J.K.5
-
12
-
-
36849089086
-
A novel class of bacteria-induced small RNAs in Arabidopsis
-
10.1101/gad.1595107, 2081978, 18003861
-
Katiyar-Agarwal S, Gao S, Vivian-Smith A, Jin H. A novel class of bacteria-induced small RNAs in Arabidopsis. Genes Dev 2007, 21(23):3123-3134. 10.1101/gad.1595107, 2081978, 18003861.
-
(2007)
Genes Dev
, vol.21
, Issue.23
, pp. 3123-3134
-
-
Katiyar-Agarwal, S.1
Gao, S.2
Vivian-Smith, A.3
Jin, H.4
-
13
-
-
33845202133
-
A pathogen-inducible endogenous siRNA in plant immunity
-
10.1073/pnas.0608258103, 1693862, 17071740
-
Katiyar-Agarwal S, Morgan R, Dahlbeck D, Borsani O, Villegas A, Zhu JK, Staskawicz BJ, Jin H. A pathogen-inducible endogenous siRNA in plant immunity. Proc Natl Acad Sci USA 2006, 103(47):18002-18007. 10.1073/pnas.0608258103, 1693862, 17071740.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.47
, pp. 18002-18007
-
-
Katiyar-Agarwal, S.1
Morgan, R.2
Dahlbeck, D.3
Borsani, O.4
Villegas, A.5
Zhu, J.K.6
Staskawicz, B.J.7
Jin, H.8
-
14
-
-
42449150879
-
Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)
-
10.1073/pnas.0708743105, 2290808, 18353984
-
Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D. Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs). Proc Natl Acad Sci USA 2008, 105(12):4951-4956. 10.1073/pnas.0708743105, 2290808, 18353984.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.12
, pp. 4951-4956
-
-
Lu, C.1
Jeong, D.H.2
Kulkarni, K.3
Pillay, M.4
Nobuta, K.5
German, R.6
Thatcher, S.R.7
Maher, C.8
Zhang, L.9
Ware, D.10
-
15
-
-
61449191758
-
Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa
-
10.1101/gr.084806.108, 2612963, 18971307
-
Zhou X, Sunkar R, Jin H, Zhu JK, Zhang W. Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa. Genome Res 2009, 19(1):70-78. 10.1101/gr.084806.108, 2612963, 18971307.
-
(2009)
Genome Res
, vol.19
, Issue.1
, pp. 70-78
-
-
Zhou, X.1
Sunkar, R.2
Jin, H.3
Zhu, J.K.4
Zhang, W.5
-
16
-
-
65549141701
-
Strand selective generation of endo-siRNAs from the Na/phosphate transporter gene Slc34a1 in murine tissues
-
10.1093/nar/gkp088, 2673434, 19237395
-
Carlile M, Swan D, Jackson K, Preston-Fayers K, Ballester B, Flicek P, Werner A. Strand selective generation of endo-siRNAs from the Na/phosphate transporter gene Slc34a1 in murine tissues. Nucleic Acids Res 2009, 37(7):2274-2282. 10.1093/nar/gkp088, 2673434, 19237395.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.7
, pp. 2274-2282
-
-
Carlile, M.1
Swan, D.2
Jackson, K.3
Preston-Fayers, K.4
Ballester, B.5
Flicek, P.6
Werner, A.7
-
17
-
-
44349101881
-
Two distinctmechanisms generate endogenous siRNAs from bidirectional transcription in Drosophila melanogaster
-
10.1038/nsmb.1438, 2713754, 18500351
-
Okamura K, Balla S, Martin R, Liu N, Lai EC. Two distinctmechanisms generate endogenous siRNAs from bidirectional transcription in Drosophila melanogaster. Nat Struct Mol Biol 2008, 15(6):581-590. 10.1038/nsmb.1438, 2713754, 18500351.
-
(2008)
Nat Struct Mol Biol
, vol.15
, Issue.6
, pp. 581-590
-
-
Okamura, K.1
Balla, S.2
Martin, R.3
Liu, N.4
Lai, E.C.5
-
18
-
-
44349130233
-
Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes
-
10.1038/nature06908, 18404146
-
Watanabe T, Totoki Y, Toyoda A, Kaneda M, Kuramochi-Miyagawa S, Obata Y, Chiba H, Kohara Y, Kono T, Nakano T. Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes. Nature 2008, 453:539-543. 10.1038/nature06908, 18404146.
-
(2008)
Nature
, vol.453
, pp. 539-543
-
-
Watanabe, T.1
Totoki, Y.2
Toyoda, A.3
Kaneda, M.4
Kuramochi-Miyagawa, S.5
Obata, Y.6
Chiba, H.7
Kohara, Y.8
Kono, T.9
Nakano, T.10
-
19
-
-
33746785696
-
Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species
-
10.1093/nar/gkl473, 1524920, 16849434
-
Zhang Y, Liu XS, Liu QR, Wei L. Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species. Nucleic Acids Res 2006, 34(12):3465-3475. 10.1093/nar/gkl473, 1524920, 16849434.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.12
, pp. 3465-3475
-
-
Zhang, Y.1
Liu, X.S.2
Liu, Q.R.3
Wei, L.4
-
20
-
-
21044431735
-
Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution
-
10.1126/science.1108625, 15790807
-
Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, Patel S, Long J, Stern D, Tammana H, Helt G. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. Science 2005, 308(5725):1149-1154. 10.1126/science.1108625, 15790807.
-
(2005)
Science
, vol.308
, Issue.5725
, pp. 1149-1154
-
-
Cheng, J.1
Kapranov, P.2
Drenkow, J.3
Dike, S.4
Brubaker, S.5
Patel, S.6
Long, J.7
Stern, D.8
Tammana, H.9
Helt, G.10
-
21
-
-
33748445546
-
Normalization and quantification of differential expression in gene expression microarrays
-
10.1093/bib/bbl002, 16772260
-
Steinhoff C, Vingron M. Normalization and quantification of differential expression in gene expression microarrays. Brief Bioinform 2006, 7(2):166-177. 10.1093/bib/bbl002, 16772260.
-
(2006)
Brief Bioinform
, vol.7
, Issue.2
, pp. 166-177
-
-
Steinhoff, C.1
Vingron, M.2
-
22
-
-
0022814618
-
Intragenic pausing and anti-sense transcription within the murine c-myc locus
-
1167235, 3024965
-
Nepveu A, Marcu KB. Intragenic pausing and anti-sense transcription within the murine c-myc locus. EMBO J 1986, 5(11):2859-2865. 1167235, 3024965.
-
(1986)
EMBO J
, vol.5
, Issue.11
, pp. 2859-2865
-
-
Nepveu, A.1
Marcu, K.B.2
-
23
-
-
0032104246
-
A novel transforming growth factor beta2 antisense transcript in mammalian lung
-
1219481, 9601055
-
Coker RK, Laurent GJ, Dabbagh K, Dawson J, McAnulty RJ. A novel transforming growth factor beta2 antisense transcript in mammalian lung. Biochem J 1998, 332(Pt 2):297-301. 1219481, 9601055.
-
(1998)
Biochem J
, vol.332
, Issue.PART 2
, pp. 297-301
-
-
Coker, R.K.1
Laurent, G.J.2
Dabbagh, K.3
Dawson, J.4
McAnulty, R.J.5
-
24
-
-
17844363942
-
Disclosing hidden transcripts: mouse natural sense-antisense transcripts tend to be poly(A) negative and nuclear localized
-
10.1101/gr.3155905, 1074361, 15781571
-
Kiyosawa H, Mise N, Iwase S, Hayashizaki Y, Abe K. Disclosing hidden transcripts: mouse natural sense-antisense transcripts tend to be poly(A) negative and nuclear localized. Genome Res 2005, 15(4):463-474. 10.1101/gr.3155905, 1074361, 15781571.
-
(2005)
Genome Res
, vol.15
, Issue.4
, pp. 463-474
-
-
Kiyosawa, H.1
Mise, N.2
Iwase, S.3
Hayashizaki, Y.4
Abe, K.5
-
25
-
-
33645785104
-
A high-resolution map of transcription in the yeast genome
-
10.1073/pnas.0601091103, 1414796,1414796, 16569694
-
David L, Huber W, Granovskaia M, Toedling J, Palm CJ, Bofkin L, Jones T, Davis RW, Steinmetz LM. A high-resolution map of transcription in the yeast genome. Proc Natl Acad Sci USA 2006, 103(14):5320-5325. 10.1073/pnas.0601091103, 1414796,1414796, 16569694.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.14
, pp. 5320-5325
-
-
David, L.1
Huber, W.2
Granovskaia, M.3
Toedling, J.4
Palm, C.J.5
Bofkin, L.6
Jones, T.7
Davis, R.W.8
Steinmetz, L.M.9
-
26
-
-
33947604744
-
Comparative analysis of cis- encoded antisense RNAs in eukaryotes
-
10.1016/j.gene.2006.12.005, 17250976
-
Numata K, Okada Y, Saito R, Kiyosawa H, Kanai A, Tomita M. Comparative analysis of cis- encoded antisense RNAs in eukaryotes. Gene 2007, 392(1-2):134-141. 10.1016/j.gene.2006.12.005, 17250976.
-
(2007)
Gene
, vol.392
, Issue.1-2
, pp. 134-141
-
-
Numata, K.1
Okada, Y.2
Saito, R.3
Kiyosawa, H.4
Kanai, A.5
Tomita, M.6
-
27
-
-
26944454054
-
Evidence for a preferential targeting of 3'-UTRs by cis- encoded natural antisense transcripts
-
10.1093/nar/gki852, 1243798, 16204454
-
Sun M, Hurst LD, Carmichael GG, Chen J. Evidence for a preferential targeting of 3'-UTRs by cis- encoded natural antisense transcripts. Nucleic Acids Res 2005, 33(17):5533-5543. 10.1093/nar/gki852, 1243798, 16204454.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.17
, pp. 5533-5543
-
-
Sun, M.1
Hurst, L.D.2
Carmichael, G.G.3
Chen, J.4
-
28
-
-
6044266260
-
Non-coding RNA directed DNA demethylation of Sphk1 CpG island
-
10.1016/j.bbrc.2004.07.159, 15325271
-
Imamura T, Yamamoto S, Ohgane J, Hattori N, Tanaka S, Shiota K. Non-coding RNA directed DNA demethylation of Sphk1 CpG island. Biochem Biophys Res Commun 2004, 322(2):593-600. 10.1016/j.bbrc.2004.07.159, 15325271.
-
(2004)
Biochem Biophys Res Commun
, vol.322
, Issue.2
, pp. 593-600
-
-
Imamura, T.1
Yamamoto, S.2
Ohgane, J.3
Hattori, N.4
Tanaka, S.5
Shiota, K.6
-
29
-
-
36249026230
-
Alternately spliced WT1 antisense transcripts interact with WT1 sense RNA and show epigenetic and splicing defects in cancer
-
10.1261/rna.562907, 2080606, 17940140
-
Dallosso AR, Hancock AL, Malik S, Salpekar A, King-Underwood L, Pritchard-Jones K, Peters J, Moorwood K, Ward A, Malik KT. Alternately spliced WT1 antisense transcripts interact with WT1 sense RNA and show epigenetic and splicing defects in cancer. RNA 2007, 13(12):2287-2299. 10.1261/rna.562907, 2080606, 17940140.
-
(2007)
RNA
, vol.13
, Issue.12
, pp. 2287-2299
-
-
Dallosso, A.R.1
Hancock, A.L.2
Malik, S.3
Salpekar, A.4
King-Underwood, L.5
Pritchard-Jones, K.6
Peters, J.7
Moorwood, K.8
Ward, A.9
Malik, K.T.10
-
30
-
-
38949194937
-
Crucial role ofantisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification
-
10.1242/dev.008490, 18057104
-
Ohhata T, Hoki Y, Sasaki H, Sado T. Crucial role ofantisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification. Development 2008, 135(2):227-235. 10.1242/dev.008490, 18057104.
-
(2008)
Development
, vol.135
, Issue.2
, pp. 227-235
-
-
Ohhata, T.1
Hoki, Y.2
Sasaki, H.3
Sado, T.4
-
31
-
-
33646473694
-
Complex loci in human and mouse genomes
-
10.1371/journal.pgen.0020047, 1449890, 16683030
-
Engstrom PG, Suzuki H, Ninomiya N, Akalin A, Sessa L, Lavorgna G, Brozzi A, Luzi L, Tan SL, Yang L. Complex loci in human and mouse genomes. PLoS Genet 2006, 2(4):e47. 10.1371/journal.pgen.0020047, 1449890, 16683030.
-
(2006)
PLoS Genet
, vol.2
, Issue.4
-
-
Engstrom, P.G.1
Suzuki, H.2
Ninomiya, N.3
Akalin, A.4
Sessa, L.5
Lavorgna, G.6
Brozzi, A.7
Luzi, L.8
Tan, S.L.9
Yang, L.10
-
32
-
-
34250212945
-
Sense-antisense pairs in mammals: functional and evolutionary considerations
-
10.1186/gb-2007-8-3-r40, 1868933, 17371592
-
Galante PA, Vidal DO, de Souza JE, Camargo AA, de Souza SJ. Sense-antisense pairs in mammals: functional and evolutionary considerations. Genome Biol 2007, 8(3):R40. 10.1186/gb-2007-8-3-r40, 1868933, 17371592.
-
(2007)
Genome Biol
, vol.8
, Issue.3
-
-
Galante, P.A.1
Vidal, D.O.2
de Souza, J.E.3
Camargo, A.A.4
de Souza, S.J.5
-
33
-
-
24644519490
-
The transcriptional landscape of the mammalian genome
-
10.1126/science.1112014, 16141072
-
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C. The transcriptional landscape of the mammalian genome. Science 2005, 309(5740):1559-1563. 10.1126/science.1112014, 16141072.
-
(2005)
Science
, vol.309
, Issue.5740
, pp. 1559-1563
-
-
Carninci, P.1
Kasukawa, T.2
Katayama, S.3
Gough, J.4
Frith, M.C.5
Maeda, N.6
Oyama, R.7
Ravasi, T.8
Lenhard, B.9
Wells, C.10
-
34
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
10.1038/nature05874, 2212820, 17571346
-
Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 2007, 447(7146):799-816. 10.1038/nature05874, 2212820, 17571346.
-
(2007)
Nature
, vol.447
, Issue.7146
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
Guigo, R.4
Gingeras, T.R.5
Margulies, E.H.6
Weng, Z.7
Snyder, M.8
Dermitzakis, E.T.9
Thurman, R.E.10
-
35
-
-
34250317866
-
Aard is specifically up-regulated in Sertoli cells during mouse testis differentiation
-
10.1387/ijdb.062219ts, 17486547
-
Svingen T, Beverdam A, Verma P, Wilhelm D, Koopman P. Aard is specifically up-regulated in Sertoli cells during mouse testis differentiation. Int J Dev Biol 2007, 51(3):255-258. 10.1387/ijdb.062219ts, 17486547.
-
(2007)
Int J Dev Biol
, vol.51
, Issue.3
, pp. 255-258
-
-
Svingen, T.1
Beverdam, A.2
Verma, P.3
Wilhelm, D.4
Koopman, P.5
-
36
-
-
0017295277
-
Genetic analysis of mammary tumor induction and expression of mammary tumor virus antigen in hormone-treated ovariectomized GR mice
-
van Nie R, Hilgers J. Genetic analysis of mammary tumor induction and expression of mammary tumor virus antigen in hormone-treated ovariectomized GR mice. J Natl Cancer Inst 1976, 56(1):27-32.
-
(1976)
J Natl Cancer Inst
, vol.56
, Issue.1
, pp. 27-32
-
-
van Nie, R.1
Hilgers, J.2
-
37
-
-
34247204213
-
Expression profiling of antisense transcripts on DNA arrays
-
Werner A, Schmutzler G, Carlile M, Miles CG, Peters H. Expression profiling of antisense transcripts on DNA arrays. Physiol Genomics 2007, 28(3):294-300.
-
(2007)
Physiol Genomics
, vol.28
, Issue.3
, pp. 294-300
-
-
Werner, A.1
Schmutzler, G.2
Carlile, M.3
Miles, C.G.4
Peters, H.5
-
38
-
-
34547125791
-
Uncovering information on expression of natural antisense transcripts in Affymetrix MOE430 datasets
-
10.1186/1471-2164-8-200, 1929078, 17598913
-
Oeder S, Mages J, Flicek P, Lang R. Uncovering information on expression of natural antisense transcripts in Affymetrix MOE430 datasets. BMC Genomics 2007, 8:200. 10.1186/1471-2164-8-200, 1929078, 17598913.
-
(2007)
BMC Genomics
, vol.8
, pp. 200
-
-
Oeder, S.1
Mages, J.2
Flicek, P.3
Lang, R.4
-
39
-
-
35248844540
-
Non-coding antisense transcription detected by conventional and single-stranded cDNA microarray
-
10.1186/1471-2164-8-295, 2020490, 17727707
-
Vallon-Christersson J, Staaf J, Kvist A, Medstrand P, Borg A, Rovira C. Non-coding antisense transcription detected by conventional and single-stranded cDNA microarray. BMC Genomics 2007, 8:295. 10.1186/1471-2164-8-295, 2020490, 17727707.
-
(2007)
BMC Genomics
, vol.8
, pp. 295
-
-
Vallon-Christersson, J.1
Staaf, J.2
Kvist, A.3
Medstrand, P.4
Borg, A.5
Rovira, C.6
-
40
-
-
35548998349
-
Highly expressed genes are associated with inverse antisense transcription in mouse
-
10.1007/s12041-007-0015-x, 17968138
-
Gyorffy A, Surowiak P, Tulassay Z, Gyorffy B. Highly expressed genes are associated with inverse antisense transcription in mouse. J Genet 2007, 86(2):103-109. 10.1007/s12041-007-0015-x, 17968138.
-
(2007)
J Genet
, vol.86
, Issue.2
, pp. 103-109
-
-
Gyorffy, A.1
Surowiak, P.2
Tulassay, Z.3
Gyorffy, B.4
-
41
-
-
39849089289
-
Genome-wide analysis of antisense transcription with Affymetrix exon array
-
10.1186/1471-2164-9-27, 2257944, 18211689
-
Ge X, Rubinstein WS, Jung YC, Wu Q. Genome-wide analysis of antisense transcription with Affymetrix exon array. BMC Genomics 2008, 9:27. 10.1186/1471-2164-9-27, 2257944, 18211689.
-
(2008)
BMC Genomics
, vol.9
, pp. 27
-
-
Ge, X.1
Rubinstein, W.S.2
Jung, Y.C.3
Wu, Q.4
-
42
-
-
57749195712
-
RNA-Seq: a revolutionary tool for transcriptomics
-
10.1038/nrg2484, 19015660
-
Wang Z, Gerstein M, Snyder M. RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 2009, 10(1):57-63. 10.1038/nrg2484, 19015660.
-
(2009)
Nat Rev Genet
, vol.10
, Issue.1
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
43
-
-
23144447636
-
OligoWiz 2.0-integrating sequence feature annotation into the design of microarray probes
-
Web Server:10.1093/nar/gki399, 1160160, 15980547
-
Wernersson R, Nielsen HB. OligoWiz 2.0-integrating sequence feature annotation into the design of microarray probes. Nucleic Acids Res 2005, (33 Web Server):W611-615. 10.1093/nar/gki399, 1160160, 15980547.
-
(2005)
Nucleic Acids Res
, Issue.33
-
-
Wernersson, R.1
Nielsen, H.B.2
-
44
-
-
20144376345
-
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
-
10.1093/bioinformatics/bti042, 15388519
-
Yanai I, Benjamin H, Shmoish M, Chalifa-Caspi V, Shklar M, Ophir R, Bar-Even A, Horn-Saban S, Safran M, Domany E. Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification. Bioinformatics 2005, 21(5):650-659. 10.1093/bioinformatics/bti042, 15388519.
-
(2005)
Bioinformatics
, vol.21
, Issue.5
, pp. 650-659
-
-
Yanai, I.1
Benjamin, H.2
Shmoish, M.3
Chalifa-Caspi, V.4
Shklar, M.5
Ophir, R.6
Bar-Even, A.7
Horn-Saban, S.8
Safran, M.9
Domany, E.10
-
45
-
-
84870490179
-
National Center for Biotechnology Information Gene Expression Omnibus
-
National Center for Biotechnology Information Gene Expression Omnibus. , http://www.ncbi.nlm.nih.gov/geo/
-
-
-
-
46
-
-
70349656730
-
Antisense Viewer
-
Antisense Viewer. , http://www.brc.riken.jp/archives/Kiyosawa/BMC_Genomics09/
-
-
-
-
47
-
-
44349144551
-
Comparative expression analysis uncovers novel features of endogenous antisense transcription
-
10.1093/hmg/ddn051, 18283053
-
Okada Y, Tashiro C, Numata K, Watanabe K, Nakaoka H, Yamamoto N, Okubo K, Ikeda R, Saito R, Kanai A. Comparative expression analysis uncovers novel features of endogenous antisense transcription. Hum Mol Genet 2008, 17(11):1631-1640. 10.1093/hmg/ddn051, 18283053.
-
(2008)
Hum Mol Genet
, vol.17
, Issue.11
, pp. 1631-1640
-
-
Okada, Y.1
Tashiro, C.2
Numata, K.3
Watanabe, K.4
Nakaoka, H.5
Yamamoto, N.6
Okubo, K.7
Ikeda, R.8
Saito, R.9
Kanai, A.10
-
48
-
-
9144252038
-
Complete sequencing and characterization of 21,243 full-length human cDNAs
-
10.1038/ng1285, 14702039
-
Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K. Complete sequencing and characterization of 21,243 full-length human cDNAs. Nat Genet 2004, 36:40-45. 10.1038/ng1285, 14702039.
-
(2004)
Nat Genet
, vol.36
, pp. 40-45
-
-
Ota, T.1
Suzuki, Y.2
Nishikawa, T.3
Otsuki, T.4
Sugiyama, T.5
Irie, R.6
Wakamatsu, A.7
Hayashi, K.8
Sato, H.9
Nagai, K.10
-
49
-
-
33846057724
-
NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
-
Database:10.1093/nar/gkl842, 1716718, 17130148
-
Pruitt KD, Tatusova T, Maglott DR. NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res 2007, (35 Database):D61-65. 10.1093/nar/gkl842, 1716718, 17130148.
-
(2007)
Nucleic Acids Res
, Issue.35
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
50
-
-
0037252705
-
Database resources of the National Center for Biotechnology
-
10.1093/nar/gkg033, 165480, 12519941
-
Wheeler DL, Church DM, Federhen S, Lash AE, Madden TL, Pontius JU, Schuler GD, Schriml LM, Sequeira E, Tatusova TA. Database resources of the National Center for Biotechnology. Nucleic Acids Res 2003, 31(1):28-33. 10.1093/nar/gkg033, 165480, 12519941.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.1
, pp. 28-33
-
-
Wheeler, D.L.1
Church, D.M.2
Federhen, S.3
Lash, A.E.4
Madden, T.L.5
Pontius, J.U.6
Schuler, G.D.7
Schriml, L.M.8
Sequeira, E.9
Tatusova, T.A.10
-
51
-
-
0037267806
-
Human-mouse alignments with BLASTZ
-
10.1101/gr.809403, 430961, 12529312
-
Schwartz S, Kent WJ, Smit A, Zhang Z, Baertsch R, Hardison RC, Haussler D, Miller W. Human-mouse alignments with BLASTZ. Genome Res 2003, 13(1):103-107. 10.1101/gr.809403, 430961, 12529312.
-
(2003)
Genome Res
, vol.13
, Issue.1
, pp. 103-107
-
-
Schwartz, S.1
Kent, W.J.2
Smit, A.3
Zhang, Z.4
Baertsch, R.5
Hardison, R.C.6
Haussler, D.7
Miller, W.8
-
52
-
-
47149115482
-
BioMart Project
-
BioMart Project. , http://www.biomart.org/
-
-
-
-
53
-
-
0017691821
-
Spermatogenic cells of the prepuberal mouse. Isolation and morphological characterization
-
10.1083/jcb.74.1.68, 2109873, 874003
-
Bellve AR, Cavicchia JC, Millette CF, O'Brien DA, Bhatnagar YM, Dym M. Spermatogenic cells of the prepuberal mouse. Isolation and morphological characterization. J Cell Biol 1977, 74(1):68-85. 10.1083/jcb.74.1.68, 2109873, 874003.
-
(1977)
J Cell Biol
, vol.74
, Issue.1
, pp. 68-85
-
-
Bellve, A.R.1
Cavicchia, J.C.2
Millette, C.F.3
O'Brien, D.A.4
Bhatnagar, Y.M.5
Dym, M.6
-
54
-
-
0017225975
-
Separation of mouse spermatogenic cells by sedimentation velocity. A morphological characterization
-
10.1016/0012-1606(76)90262-1, 176074
-
Romrell LJ, Bellve AR, Fawcett DW. Separation of mouse spermatogenic cells by sedimentation velocity. A morphological characterization. Dev Biol 1976, 49(1):119-131. 10.1016/0012-1606(76)90262-1, 176074.
-
(1976)
Dev Biol
, vol.49
, Issue.1
, pp. 119-131
-
-
Romrell, L.J.1
Bellve, A.R.2
Fawcett, D.W.3
|