메뉴 건너뛰기




Volumn 37, Issue 7, 2009, Pages 2274-2282

Strand selective generation of endo-siRNAs from the Na/phosphate transporter gene Slc34a1 in murine tissues

Author keywords

[No Author keywords available]

Indexed keywords

PROFILIN; SMALL INTERFERING RNA; SODIUM PHOSPHATE COTRANSPORTER 2A;

EID: 65549141701     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkp088     Document Type: Article
Times cited : (37)

References (45)
  • 1
    • 58149528403 scopus 로고    scopus 로고
    • Antisense transcription: A critical look in both directions
    • Beiter,T., Reich,E., Williams,R.W. and Simon,P. (2008) Antisense transcription: A critical look in both directions. Cell Mol. Life Sci., 66, 94-112.
    • (2008) Cell Mol. Life Sci , vol.66 , pp. 94-112
    • Beiter, T.1    Reich, E.2    Williams, R.W.3    Simon, P.4
  • 2
    • 33644654957 scopus 로고    scopus 로고
    • The small introns of antisense genes are better explained by selection for rapid transcription than by "genomic design
    • Chen,J., Sun,M., Rowley,J.D. and Hurst,L.D. (2005) The small introns of antisense genes are better explained by selection for rapid transcription than by "genomic design". Genetics, 171, 2151-2155.
    • (2005) Genetics , vol.171 , pp. 2151-2155
    • Chen, J.1    Sun, M.2    Rowley, J.D.3    Hurst, L.D.4
  • 3
    • 4644242349 scopus 로고    scopus 로고
    • RNA silencing in plants
    • Baulcombe,D. (2004) RNA silencing in plants. Nature, 431, 356-363.
    • (2004) Nature , vol.431 , pp. 356-363
    • Baulcombe, D.1
  • 4
    • 85041131924 scopus 로고
    • Antisense RNA control in bacteria, phages, and plasmids
    • Wagner,E.G. and Simons,R.W. (1994) Antisense RNA control in bacteria, phages, and plasmids. Annual Rev Microbiol., 48, 713-742.
    • (1994) Annual Rev Microbiol , vol.48 , pp. 713-742
    • Wagner, E.G.1    Simons, R.W.2
  • 5
    • 33751536642 scopus 로고    scopus 로고
    • Genome-wide natural antisense transcription: Coupling its regulation to its different regulatory mechanisms
    • Lapidot,M. and Pilpel,Y. (2006) Genome-wide natural antisense transcription: Coupling its regulation to its different regulatory mechanisms. EMBO Rep., 7, 1216-1222.
    • (2006) EMBO Rep , vol.7 , pp. 1216-1222
    • Lapidot, M.1    Pilpel, Y.2
  • 7
    • 33646158501 scopus 로고    scopus 로고
    • Natural antisense transcripts: Sound or silence?
    • Werner,A. and Berdal,A. (2005) Natural antisense transcripts: Sound or silence? Physiol. Genomics, 23, 125-131.
    • (2005) Physiol. Genomics , vol.23 , pp. 125-131
    • Werner, A.1    Berdal, A.2
  • 8
    • 3242878307 scopus 로고    scopus 로고
    • Monoallelic gene expression: A repertoire of recurrent themes
    • Goldmit,M. and Bergman,Y. (2004) Monoallelic gene expression: A repertoire of recurrent themes. Immunol. Rev., 200, 197-214.
    • (2004) Immunol. Rev , vol.200 , pp. 197-214
    • Goldmit, M.1    Bergman, Y.2
  • 9
    • 33847032545 scopus 로고    scopus 로고
    • Noncoding RNAs and intranuclear positioning in monoallelic gene expression
    • Yang,P.K. and Kuroda,M.I. (2007) Noncoding RNAs and intranuclear positioning in monoallelic gene expression. Cell, 128, 777-786.
    • (2007) Cell , vol.128 , pp. 777-786
    • Yang, P.K.1    Kuroda, M.I.2
  • 12
    • 44949225246 scopus 로고    scopus 로고
    • Synergistic upregulation of erythropoietin receptor (EPO-R) expression by sense and antisense EPO-R transcripts in the canine lung
    • Zhang,Q., Zhang,J., Moe,O.W. and Hsia,C.C. (2008) Synergistic upregulation of erythropoietin receptor (EPO-R) expression by sense and antisense EPO-R transcripts in the canine lung. Proc. Natl Acad. Sci. USA, 105, 7612-7617.
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 7612-7617
    • Zhang, Q.1    Zhang, J.2    Moe, O.W.3    Hsia, C.C.4
  • 15
    • 0034646647 scopus 로고    scopus 로고
    • Post-transcriptional regulation of thyroid hormone receptor expression by cis-acting sequences and a naturally occurring antisense RNA
    • Hastings,M.L., Ingle,H.A., Lazar,M.A. and Munroe,S.H. (2000) Post-transcriptional regulation of thyroid hormone receptor expression by cis-acting sequences and a naturally occurring antisense RNA. J. Biol. Chem., 275, 11507-11513.
    • (2000) J. Biol. Chem , vol.275 , pp. 11507-11513
    • Hastings, M.L.1    Ingle, H.A.2    Lazar, M.A.3    Munroe, S.H.4
  • 18
    • 0037673656 scopus 로고    scopus 로고
    • Antisense transcripts with FANTOM2 clone set and their implications for gene regulation
    • Kiyosawa,H., Yamanaka,I., Osato,N., Kondo,S. and Hayashizaki,Y. (2003) Antisense transcripts with FANTOM2 clone set and their implications for gene regulation. Genome Res., 13, 1324-1334.
    • (2003) Genome Res , vol.13 , pp. 1324-1334
    • Kiyosawa, H.1    Yamanaka, I.2    Osato, N.3    Kondo, S.4    Hayashizaki, Y.5
  • 19
    • 47249107415 scopus 로고    scopus 로고
    • Processing of naturally occurring sense/antisense transcripts of the vertebrate Slc34a gene into short RNAs
    • Carlile,M., Nalbant,P., Preston-Fayers,K., McHaffie,G.S. and Werner,A. (2008) Processing of naturally occurring sense/antisense transcripts of the vertebrate Slc34a gene into short RNAs. Physiol. Genomics, 34, 95-100.
    • (2008) Physiol. Genomics , vol.34 , pp. 95-100
    • Carlile, M.1    Nalbant, P.2    Preston-Fayers, K.3    McHaffie, G.S.4    Werner, A.5
  • 22
    • 24044447664 scopus 로고    scopus 로고
    • Automated generation of heuristics for biological sequence comparison
    • Slater,G.S. and Birney,E. (2005) Automated generation of heuristics for biological sequence comparison. BMC Bioinformatics, 6, 31.
    • (2005) BMC Bioinformatics , vol.6 , pp. 31
    • Slater, G.S.1    Birney, E.2
  • 23
    • 0012804882 scopus 로고    scopus 로고
    • Computation method to identify differential allelic gene expression and novel imprinted genes
    • Yang,H.H., Hu,Y., Edmonson,M., Buetow,K. and Lee,M.P. (2003) Computation method to identify differential allelic gene expression and novel imprinted genes. Bioinformatics, 19, 952-955.
    • (2003) Bioinformatics , vol.19 , pp. 952-955
    • Yang, H.H.1    Hu, Y.2    Edmonson, M.3    Buetow, K.4    Lee, M.P.5
  • 24
    • 36249017308 scopus 로고    scopus 로고
    • Widespread monoallelic expression on human autosomes
    • Gimelbrant,A., Hutchinson,J.N., Thompson,B.R. and Chess,A. (2007) Widespread monoallelic expression on human autosomes. Science, 318, 1136-1140.
    • (2007) Science , vol.318 , pp. 1136-1140
    • Gimelbrant, A.1    Hutchinson, J.N.2    Thompson, B.R.3    Chess, A.4
  • 25
    • 0037160530 scopus 로고    scopus 로고
    • Genomic organization of profilin-III and evidence for a transcript expressed exclusively in testis
    • Braun,A., Aszodi,A., Hellebrand,H., Berna,A., Fassler,R. and Brandau,O. (2002) Genomic organization of profilin-III and evidence for a transcript expressed exclusively in testis. Gene, 283, 219-225.
    • (2002) Gene , vol.283 , pp. 219-225
    • Braun, A.1    Aszodi, A.2    Hellebrand, H.3    Berna, A.4    Fassler, R.5    Brandau, O.6
  • 26
    • 0033215420 scopus 로고    scopus 로고
    • Functional characterization of a Na+-phosphate cotransporter (NaPi-II) from zebrafish and identification of related transcripts
    • Nalbant,P., Boehmer,C., Dehmelt,L., Wehner,F. and Werner,A. (1999) Functional characterization of a Na+-phosphate cotransporter (NaPi-II) from zebrafish and identification of related transcripts. J. Physiol. 520 (Pt 1), 79-89.
    • (1999) J. Physiol , vol.520 , Issue.PART 1 , pp. 79-89
    • Nalbant, P.1    Boehmer, C.2    Dehmelt, L.3    Wehner, F.4    Werner, A.5
  • 29
    • 0032934529 scopus 로고    scopus 로고
    • Transcriptional and translational regulation of gene expression in haploid spermatids
    • Steger,K. (1999) Transcriptional and translational regulation of gene expression in haploid spermatids. Anat. Embryol., 199, 471-487.
    • (1999) Anat. Embryol , vol.199 , pp. 471-487
    • Steger, K.1
  • 30
    • 34547125791 scopus 로고    scopus 로고
    • Uncovering information on expression of natural antisense transcripts in Affymetrix MOE430 datasets
    • Oeder,S., Mages,J., Flicek,P. and Lang,R. (2007) Uncovering information on expression of natural antisense transcripts in Affymetrix MOE430 datasets. BMC Genomics, 8, 200.
    • (2007) BMC Genomics , vol.8 , pp. 200
    • Oeder, S.1    Mages, J.2    Flicek, P.3    Lang, R.4
  • 33
    • 44449122417 scopus 로고    scopus 로고
    • Molecular biology. Slicing and dicing for small RNAs
    • Birchler,J.A. and Kavi,H.H. (2008) Molecular biology. Slicing and dicing for small RNAs. Science, 320, 1023-1024.
    • (2008) Science , vol.320 , pp. 1023-1024
    • Birchler, J.A.1    Kavi, H.H.2
  • 34
    • 34948901976 scopus 로고    scopus 로고
    • Structural determinants of RNA recognition and cleavage by Dicer
    • MacRae,I.J., Zhou,K. and Doudna,J.A. (2007) Structural determinants of RNA recognition and cleavage by Dicer. Nat. Struct. Mol. Biol., 14, 934-940.
    • (2007) Nat. Struct. Mol. Biol , vol.14 , pp. 934-940
    • MacRae, I.J.1    Zhou, K.2    Doudna, J.A.3
  • 35
    • 0035942736 scopus 로고    scopus 로고
    • Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
    • Elbashir,S.M., Harborth,J., Lendeckel,W., Yalcin,A., Weber,K. and Tuschl,T. (2001) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature, 411, 494-498.
    • (2001) Nature , vol.411 , pp. 494-498
    • Elbashir, S.M.1    Harborth, J.2    Lendeckel, W.3    Yalcin, A.4    Weber, K.5    Tuschl, T.6
  • 36
    • 3142769033 scopus 로고    scopus 로고
    • The murine testicular transcriptome: Characterizing gene expression in the testis during the progression of spermatogenesis
    • Shima,J.E., McLean,D.J., McCarrey,J.R. and Griswold,M.D. (2004) The murine testicular transcriptome: Characterizing gene expression in the testis during the progression of spermatogenesis. Biol. Reprod., 71, 319-330.
    • (2004) Biol. Reprod , vol.71 , pp. 319-330
    • Shima, J.E.1    McLean, D.J.2    McCarrey, J.R.3    Griswold, M.D.4
  • 37
    • 44149106314 scopus 로고    scopus 로고
    • Random monoallelic expression: Making a choice
    • Krueger,C. and Morison,I.M. (2008) Random monoallelic expression: Making a choice. Trends Genet., 24, 257-259.
    • (2008) Trends Genet , vol.24 , pp. 257-259
    • Krueger, C.1    Morison, I.M.2
  • 38
    • 55949117057 scopus 로고    scopus 로고
    • Comparative analysis of argonaute-dependent small RNA pathways in Drosophila
    • Zhou,R., Hotta,I., Denli,A.M., Hong,P., Perrimon,N. and Hannon,G.J. (2008) Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. Mol. Cell, 32, 592-599.
    • (2008) Mol. Cell , vol.32 , pp. 592-599
    • Zhou, R.1    Hotta, I.2    Denli, A.M.3    Hong, P.4    Perrimon, N.5    Hannon, G.J.6
  • 40
    • 47349112662 scopus 로고    scopus 로고
    • siRNA-mediated heterochromatin establishment requires HP1 and is associated with antisense transcription
    • Iida,T., Nakayama,J. and Moazed,D. (2008) siRNA-mediated heterochromatin establishment requires HP1 and is associated with antisense transcription. Mol. Cell, 31, 178-189.
    • (2008) Mol. Cell , vol.31 , pp. 178-189
    • Iida, T.1    Nakayama, J.2    Moazed, D.3
  • 41
    • 4344705410 scopus 로고    scopus 로고
    • Small interfering RNA-induced transcriptional gene silencing in human cells
    • Morris,K.V., Chan,S.W., Jacobsen,S.E. and Looney,D.J. (2004) Small interfering RNA-induced transcriptional gene silencing in human cells. Science, 305, 1289-1292.
    • (2004) Science , vol.305 , pp. 1289-1292
    • Morris, K.V.1    Chan, S.W.2    Jacobsen, S.E.3    Looney, D.J.4
  • 42
    • 57149110631 scopus 로고    scopus 로고
    • Morris,K.V., Santoso,S., Turner,A.M., Pastori,C. and Hawkins,P.G. (2008) Bidirectional transcription directs both transcriptional gene activation and suppression in human cells. PLoS Genet., 4, e1000258.
    • Morris,K.V., Santoso,S., Turner,A.M., Pastori,C. and Hawkins,P.G. (2008) Bidirectional transcription directs both transcriptional gene activation and suppression in human cells. PLoS Genet., 4, e1000258.
  • 44
    • 4043121708 scopus 로고    scopus 로고
    • Testis-specific transcription mechanisms promoting male germ-cell differentiation
    • Kimmins,S., Kotaja,N., Davidson,I. and Sassone-Corsi,P. (2004) Testis-specific transcription mechanisms promoting male germ-cell differentiation. Reproduction, 128, 5-12.
    • (2004) Reproduction , vol.128 , pp. 5-12
    • Kimmins, S.1    Kotaja, N.2    Davidson, I.3    Sassone-Corsi, P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.