-
1
-
-
3242671372
-
A field guide to ubiquitylation
-
Fang S, Weissman AM. A field guide to ubiquitylation. Cell Mol Life Sci 2004;61:1546-1561.
-
(2004)
Cell Mol Life Sci
, vol.61
, pp. 1546-1561
-
-
Fang, S.1
Weissman, A.M.2
-
2
-
-
30344482590
-
Lingering mysteries of ubiquitin-chain assembly
-
Hochstrasser M. Lingering mysteries of ubiquitin-chain assembly. Cell 2006;124:27-34.
-
(2006)
Cell
, vol.124
, pp. 27-34
-
-
Hochstrasser, M.1
-
3
-
-
8844237615
-
Polyubiquitin chains: Polymeric protein signals
-
Pickart CM, Fushman D. Polyubiquitin chains: Polymeric protein signals. Curr Opin Chem Biol 2004;8:610-616.
-
(2004)
Curr Opin Chem Biol
, vol.8
, pp. 610-616
-
-
Pickart, C.M.1
Fushman, D.2
-
4
-
-
0034915764
-
Mechanisms underlying ubiquitination
-
Pickart CM. Mechanisms underlying ubiquitination. Annu Rev Biochem 2001;70:503-533.
-
(2001)
Annu Rev Biochem
, vol.70
, pp. 503-533
-
-
Pickart, C.M.1
-
5
-
-
0033961923
-
RING for destruction?
-
Freemont PS. RING for destruction? Curr Biol 2000;10:R84-R87.
-
(2000)
Curr Biol
, vol.10
-
-
Freemont, P.S.1
-
6
-
-
0033613222
-
RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination
-
Lorick KL, Jensen JP, Fang S, Ong AM, Hatakeyama S, Weissman AM. RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 11364-11369
-
-
Lorick, K.L.1
Jensen, J.P.2
Fang, S.3
Ong, A.M.4
Hatakeyama, S.5
Weissman, A.M.6
-
7
-
-
0034608951
-
Kaposi's sarcoma-associated herpesvirus encodes two proteins that block cell surface display of MHC class I chains by enhancing their endocytosis
-
Coscoy L, Ganem D. Kaposi's sarcoma-associated herpesvirus encodes two proteins that block cell surface display of MHC class I chains by enhancing their endocytosis. Proc Natl Acad Sci U S A 2000;97:8051-8056.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 8051-8056
-
-
Coscoy, L.1
Ganem, D.2
-
8
-
-
0034068631
-
Downregulation of major histocompatibility complex class I molecules by Kaposi's sarcoma-associated herpesvirus K3 and K5 proteins
-
Ishido S, Wang C, Lee BS, Cohen GB, Jung JU. Downregulation of major histocompatibility complex class I molecules by Kaposi's sarcoma-associated herpesvirus K3 and K5 proteins. J Virol 2000;74:5300-5309.
-
(2000)
J Virol
, vol.74
, pp. 5300-5309
-
-
Ishido, S.1
Wang, C.2
Lee, B.S.3
Cohen, G.B.4
Jung, J.U.5
-
10
-
-
21744433861
-
Ubiquitination on nonlysine residues by a viral E3 ubiquitin ligase
-
Cadwell K, Coscoy L. Ubiquitination on nonlysine residues by a viral E3 ubiquitin ligase. Science 2005;309:127-130.
-
(2005)
Science
, vol.309
, pp. 127-130
-
-
Cadwell, K.1
Coscoy, L.2
-
11
-
-
41949129137
-
The specificities of Kaposi's sarcoma-associated herpesvirus-encoded E3 ubiquitin ligases are determined by the positions of lysine or cysteine residues within the intracytoplasmic domains of their targets
-
Cadwell K, Coscoy L. The specificities of Kaposi's sarcoma-associated herpesvirus-encoded E3 ubiquitin ligases are determined by the positions of lysine or cysteine residues within the intracytoplasmic domains of their targets. J Virol 2008;82:4184-4189.
-
(2008)
J Virol
, vol.82
, pp. 4184-4189
-
-
Cadwell, K.1
Coscoy, L.2
-
12
-
-
34249042608
-
Ubiquitination of serine, threonine, or lysine residues on the cytoplasmic tail can induce ERAD of MHC-I by viral E3 ligase mK3
-
Wang X, Herr RA, Chua WJ, Lybarger L, Wiertz EJ, Hansen T.H. Ubiquitination of serine, threonine, or lysine residues on the cytoplasmic tail can induce ERAD of MHC-I by viral E3 ligase mK3. J Cell Biol 2007;177:613-624.
-
(2007)
J Cell Biol
, vol.177
, pp. 613-624
-
-
Wang, X.1
Herr, R.A.2
Chua, W.J.3
Lybarger, L.4
Wiertz, E.J.5
Hansen, T.H.6
-
13
-
-
0034748469
-
MHC class I ubiquitination by a viral PHD/LAP finger protein
-
Boname JM, Stevenson PG. MHC class I ubiquitination by a viral PHD/LAP finger protein. Immunity 2001;15:627-636.
-
(2001)
Immunity
, vol.15
, pp. 627-636
-
-
Boname, J.M.1
Stevenson, P.G.2
-
14
-
-
0037093467
-
Ubiquitylation of MHC class I by the K3 viral protein signals internalization and TSG101-dependent degradation
-
Hewitt EW, Duncan L, Mufti D, Baker J, Stevenson PG, Lehner PJ. Ubiquitylation of MHC class I by the K3 viral protein signals internalization and TSG101-dependent degradation. EMBO J 2002;21:2418-2429.
-
(2002)
EMBO J
, vol.21
, pp. 2418-2429
-
-
Hewitt, E.W.1
Duncan, L.2
Mufti, D.3
Baker, J.4
Stevenson, P.G.5
Lehner, P.J.6
-
15
-
-
0036091854
-
Kaposi's sarcoma-associated herpesvirus K3 utilizes the ubiquitin-proteasome system in routing class major histocompatibility complexes to late endocytic compartments
-
Lorenzo ME, Jung JU, Ploegh HL. Kaposi's sarcoma-associated herpesvirus K3 utilizes the ubiquitin-proteasome system in routing class major histocompatibility complexes to late endocytic compartments. J Virol 2002;76:5522-5531.
-
(2002)
J Virol
, vol.76
, pp. 5522-5531
-
-
Lorenzo, M.E.1
Jung, J.U.2
Ploegh, H.L.3
-
16
-
-
0037007234
-
Multiple endocytic trafficking pathways of MHC class I molecules induced by a Herpesvirus protein
-
Means RE, Ishido S, Alvarez X, Jung JU. Multiple endocytic trafficking pathways of MHC class I molecules induced by a Herpesvirus protein. EMBO J 2002;21:1638-1649.
-
(2002)
EMBO J
, vol.21
, pp. 1638-1649
-
-
Means, R.E.1
Ishido, S.2
Alvarez, X.3
Jung, J.U.4
-
17
-
-
0034971266
-
A viral protein that selectively downregulates ICAM-1 and B7-2 and modulates T cell costimulation
-
Coscoy L, Ganem D. A viral protein that selectively downregulates ICAM-1 and B7-2 and modulates T cell costimulation. J Clin Invest 2001;107:1599-1606.
-
(2001)
J Clin Invest
, vol.107
, pp. 1599-1606
-
-
Coscoy, L.1
Ganem, D.2
-
18
-
-
0033667743
-
Inhibition of natural killer cell-mediated cytotoxicity by Kaposi's sarcoma-associated herpesvirus K5 protein
-
Ishido S, Choi JK, Lee BS, Wang C, DeMaria M, Johnson RP, Cohen GB, Jung JU. Inhibition of natural killer cell-mediated cytotoxicity by Kaposi's sarcoma-associated herpesvirus K5 protein. Immunity 2000;13:365-374.
-
(2000)
Immunity
, vol.13
, pp. 365-374
-
-
Ishido, S.1
Choi, J.K.2
Lee, B.S.3
Wang, C.4
DeMaria, M.5
Johnson, R.P.6
Cohen, G.B.7
Jung, J.U.8
-
19
-
-
33847238748
-
Downregulation of gamma interferon receptor 1 by Kaposi's sarcoma-associated herpesvirus K3 and K5
-
Li Q, Means R, Lang S, Jung JU. Downregulation of gamma interferon receptor 1 by Kaposi's sarcoma-associated herpesvirus K3 and K5. J Virol 2007;81:2117-2127.
-
(2007)
J Virol
, vol.81
, pp. 2117-2127
-
-
Li, Q.1
Means, R.2
Lang, S.3
Jung, J.U.4
-
20
-
-
40349108461
-
Down-regulation of NKG2D and NKp80 ligands by Kaposi's sarcoma-associated herpesvirus K5 protects against NK cell cytotoxicity
-
Thomas M, Boname JM, Field S, Nejentsev S, Salio M, Cerundolo V, Wills M, Lehner PJ. Down-regulation of NKG2D and NKp80 ligands by Kaposi's sarcoma-associated herpesvirus K5 protects against NK cell cytotoxicity. Proc Natl Acad Sci U S A 2008;105:1656-1661.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 1656-1661
-
-
Thomas, M.1
Boname, J.M.2
Field, S.3
Nejentsev, S.4
Salio, M.5
Cerundolo, V.6
Wills, M.7
Lehner, P.J.8
-
21
-
-
0037237794
-
Virus subversion of the MHC class I peptide-loading complex
-
Lybarger L, Wang X, Harris MR, Virgin HW, Hansen TH. Virus subversion of the MHC class I peptide-loading complex. Immunity 2003;18:121-130.
-
(2003)
Immunity
, vol.18
, pp. 121-130
-
-
Lybarger, L.1
Wang, X.2
Harris, M.R.3
Virgin, H.W.4
Hansen, T.H.5
-
22
-
-
15244359447
-
Requirements for the selective degradation of endoplasmic reticulum-resident major histocompatibility complex class I proteins by the viral immune evasion molecule mK3
-
Wang X, Connors R, Harris MR, Hansen TH, Lybarger L. Requirements for the selective degradation of endoplasmic reticulum-resident major histocompatibility complex class I proteins by the viral immune evasion molecule mK3. J Virol 2005;79:4099-4108.
-
(2005)
J Virol
, vol.79
, pp. 4099-4108
-
-
Wang, X.1
Connors, R.2
Harris, M.R.3
Hansen, T.H.4
Lybarger, L.5
-
23
-
-
0037155246
-
Functional organization of MIR2, a novel viral regulator of selective endocytosis
-
Sanchez DJ, Coscoy L, Ganem D. Functional organization of MIR2, a novel viral regulator of selective endocytosis. J Biol Chem 2002;277:6124-6130.
-
(2002)
J Biol Chem
, vol.277
, pp. 6124-6130
-
-
Sanchez, D.J.1
Coscoy, L.2
Ganem, D.3
-
24
-
-
0346373729
-
Downregulation of major histocompatibility complex class I by human ubiquitin ligases related to viral immune evasion proteins
-
Bartee E, Mansouri M, Nerenberg BTH, Gouveia K, Fruh K. Downregulation of major histocompatibility complex class I by human ubiquitin ligases related to viral immune evasion proteins. J Virol 2004;78:1109-1120.
-
(2004)
J Virol
, vol.78
, pp. 1109-1120
-
-
Bartee, E.1
Mansouri, M.2
Nerenberg, B.T.H.3
Gouveia, K.4
Fruh, K.5
-
25
-
-
34548349295
-
MARCH-XI, a novel transmembrane ubiquitin ligase implicated in ubiquitin-dependent protein sorting in developing spermatids
-
Morokuma Y, Nakamura N, Kato A, Notoya M, Yamamoto Y, Sakai Y, Fukuda H, Yamashina S, Hirata Y, Hirose S. MARCH-XI, a novel transmembrane ubiquitin ligase implicated in ubiquitin-dependent protein sorting in developing spermatids. J Biol Chem 2007;282:24806-24815.
-
(2007)
J Biol Chem
, vol.282
, pp. 24806-24815
-
-
Morokuma, Y.1
Nakamura, N.2
Kato, A.3
Notoya, M.4
Yamamoto, Y.5
Sakai, Y.6
Fukuda, H.7
Yamashina, S.8
Hirata, Y.9
Hirose, S.10
-
26
-
-
42149179893
-
MHC class II stabilization at the surface of human dendritic cells is the result of maturation-dependent MARCH I down-regulation
-
De GA, Camosseto V, Thibodeau J, Ceppi M, Catalan N, Pierre P, Gatti E. MHC class II stabilization at the surface of human dendritic cells is the result of maturation-dependent MARCH I down-regulation. Proc Natl Acad Sci U S A 2008;105:3491-3496.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 3491-3496
-
-
De, G.A.1
Camosseto, V.2
Thibodeau, J.3
Ceppi, M.4
Catalan, N.5
Pierre, P.6
Gatti, E.7
-
27
-
-
33846984215
-
Novel regulation of MHC class II function in B cells
-
Matsuki Y, Ohmura-Hoshino M, Goto E, Aoki M, Mito-Yoshida M, Uematsu M, Hasegawa T, Koseki H, Ohara O, Nakayama M, Toyooka K, Matsuoka K, Hotta H, Yamamoto A, Ishido S. Novel regulation of MHC class II function in B cells. EMBO J 2007;26:846-854.
-
(2007)
EMBO J
, vol.26
, pp. 846-854
-
-
Matsuki, Y.1
Ohmura-Hoshino, M.2
Goto, E.3
Aoki, M.4
Mito-Yoshida, M.5
Uematsu, M.6
Hasegawa, T.7
Koseki, H.8
Ohara, O.9
Nakayama, M.10
Toyooka, K.11
Matsuoka, K.12
Hotta, H.13
Yamamoto, A.14
Ishido, S.15
-
28
-
-
33745312078
-
Inhibition of MHC class II expression and immune responses by c-MIR
-
Ohmura-Hoshino M, Matsuki Y, Aoki M, Goto E, Mito M, Uematsu M, Kakiuchi T, Hotta H, Ishido S. Inhibition of MHC class II expression and immune responses by c-MIR. J Immunol 2006;177:341-354.
-
(2006)
J Immunol
, vol.177
, pp. 341-354
-
-
Ohmura-Hoshino, M.1
Matsuki, Y.2
Aoki, M.3
Goto, E.4
Mito, M.5
Uematsu, M.6
Kakiuchi, T.7
Hotta, H.8
Ishido, S.9
-
29
-
-
47049098137
-
Interleukin-10-induced MARCH1 mediates intracellular sequestration of MHC class II in monocytes
-
Thibodeau J, Bourgeois-Daigneault MC, Huppe G, Tremblay J, Aumont A, Houde M, Bartee E, Brunet A, Gauvreau ME, de Gassart A, Gatti E, Baril M, Cloutier M, Bontron S, Fruh K, et al. Interleukin-10-induced MARCH1 mediates intracellular sequestration of MHC class II in monocytes. Eur J Immunol 2008;38:1225-1230.
-
(2008)
Eur J Immunol
, vol.38
, pp. 1225-1230
-
-
Thibodeau, J.1
Bourgeois-Daigneault, M.C.2
Huppe, G.3
Tremblay, J.4
Aumont, A.5
Houde, M.6
Bartee, E.7
Brunet, A.8
Gauvreau, M.E.9
de Gassart, A.10
Gatti, E.11
Baril, M.12
Cloutier, M.13
Bontron, S.14
Fruh, K.15
-
30
-
-
33749253910
-
MARCH-V is a novel mitofusin 2- and Drp1-binding protein able to change mitochondrial morphology
-
Nakamura N, Kimura Y, Tokuda M, Honda S, Hirose S. MARCH-V is a novel mitofusin 2- and Drp1-binding protein able to change mitochondrial morphology. EMBO Rep 2006;7:1019-1022.
-
(2006)
EMBO Rep
, vol.7
, pp. 1019-1022
-
-
Nakamura, N.1
Kimura, Y.2
Tokuda, M.3
Honda, S.4
Hirose, S.5
-
31
-
-
33747613595
-
A novel mitochondrial ubiquitin ligase plays a critical role in mitochondrial dynamics
-
Yonashiro R, Ishido S, Kyo S, Fukuda T, Goto E, Matsuki Y, Ohmura-Hoshino M, Sada K, Hotta H, Yamamura H, Inatome R, Yanagi S. A novel mitochondrial ubiquitin ligase plays a critical role in mitochondrial dynamics. EMBO J 2006;25:3618-3626.
-
(2006)
EMBO J
, vol.25
, pp. 3618-3626
-
-
Yonashiro, R.1
Ishido, S.2
Kyo, S.3
Fukuda, T.4
Goto, E.5
Matsuki, Y.6
Ohmura-Hoshino, M.7
Sada, K.8
Hotta, H.9
Yamamura, H.10
Inatome, R.11
Yanagi, S.12
-
32
-
-
16344381891
-
MARCH-II is a syntaxin-6-binding protein involved in endosomal trafficking
-
Nakamura N, Fukuda H, Kato A, Hirose S. MARCH-II is a syntaxin-6-binding protein involved in endosomal trafficking. Mol Biol Cell 2005;16:1696-1710.
-
(2005)
Mol Biol Cell
, vol.16
, pp. 1696-1710
-
-
Nakamura, N.1
Fukuda, H.2
Kato, A.3
Hirose, S.4
-
33
-
-
32944455458
-
MARCH-III is a novel component of endosomes with properties similar to those of MARCH-II
-
Fukuda H, Nakamura N, Hirose S. MARCH-III is a novel component of endosomes with properties similar to those of MARCH-II. J Biochem 2006;139:137-145.
-
(2006)
J Biochem
, vol.139
, pp. 137-145
-
-
Fukuda, H.1
Nakamura, N.2
Hirose, S.3
-
34
-
-
44649168869
-
NAD(P)H quinone oxidoreductase 1 inhibits the proteasomal degradation of the tumour suppressor p33(ING1b)
-
Garate M, Wong RP, Campos EI, Wang Y, Li G. NAD(P)H quinone oxidoreductase 1 inhibits the proteasomal degradation of the tumour suppressor p33(ING1b). EMBO Rep 2008;9:576-581.
-
(2008)
EMBO Rep
, vol.9
, pp. 576-581
-
-
Garate, M.1
Wong, R.P.2
Campos, E.I.3
Wang, Y.4
Li, G.5
-
35
-
-
44349116590
-
Proteasome subunit Rpn13 is a novel ubiquitin receptor
-
Husnjak K, Elsasser S, Zhang N, Chen X, Randles L, Shi Y, Hofmann K, Walters KJ, Finley D, Dikic I. Proteasome subunit Rpn13 is a novel ubiquitin receptor. Nature 2008;453:481-488.
-
(2008)
Nature
, vol.453
, pp. 481-488
-
-
Husnjak, K.1
Elsasser, S.2
Zhang, N.3
Chen, X.4
Randles, L.5
Shi, Y.6
Hofmann, K.7
Walters, K.J.8
Finley, D.9
Dikic, I.10
-
36
-
-
33846705026
-
Cdc48p(Npl4p/Ufd1p) binds and segregates membrane-anchored/tethered complexes via a polyubiquitin signal present on the anchors
-
Shcherbik N, Haines DS. Cdc48p(Npl4p/Ufd1p) binds and segregates membrane-anchored/tethered complexes via a polyubiquitin signal present on the anchors. Mol Cell 2007;25:385-397.
-
(2007)
Mol Cell
, vol.25
, pp. 385-397
-
-
Shcherbik, N.1
Haines, D.S.2
-
37
-
-
3543104812
-
Model for the interaction of gammaherpesvirus 68 RING-CH finger protein mK3 with major histocompatibility complex class I and the peptide-loading complex
-
Wang X, Lybarger L, Connors R, Harris MR, Hansen TH. Model for the interaction of gammaherpesvirus 68 RING-CH finger protein mK3 with major histocompatibility complex class I and the peptide-loading complex. J Virol 2004;78:8673-8686.
-
(2004)
J Virol
, vol.78
, pp. 8673-8686
-
-
Wang, X.1
Lybarger, L.2
Connors, R.3
Harris, M.R.4
Hansen, T.H.5
-
38
-
-
33646846643
-
The viral E3 ubiquitin ligase mK3 uses the Derlin/p97 endoplasmic reticulum-associated degradation pathway to mediate down-regulation of major histocompatibility complex class I proteins
-
Wang X, Ye Y, Lencer W, Hansen TH. The viral E3 ubiquitin ligase mK3 uses the Derlin/p97 endoplasmic reticulum-associated degradation pathway to mediate down-regulation of major histocompatibility complex class I proteins. J Biol Chem 2006;281:8636-8644.
-
(2006)
J Biol Chem
, vol.281
, pp. 8636-8644
-
-
Wang, X.1
Ye, Y.2
Lencer, W.3
Hansen, T.H.4
-
39
-
-
9744227183
-
Ubiquitin: Structures, functions, mechanisms
-
Pickart CM, Eddins MJ. Ubiquitin: Structures, functions, mechanisms. Biochim Biophys Acta 2004;1695:55-72.
-
(2004)
Biochim Biophys Acta
, vol.1695
, pp. 55-72
-
-
Pickart, C.M.1
Eddins, M.J.2
-
40
-
-
0028027308
-
Ubiquitin-dependent c-Jun degradation in vivo is mediated by the delta domain
-
Treier M, Staszewski LM, Bohmann D. Ubiquitin-dependent c-Jun degradation in vivo is mediated by the delta domain. Cell 1994;78:787-798.
-
(1994)
Cell
, vol.78
, pp. 787-798
-
-
Treier, M.1
Staszewski, L.M.2
Bohmann, D.3
-
41
-
-
0024514688
-
A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein
-
Chau V, Tobias JW, Bachmair A, Marriott D, Ecker DJ, Gonda DK, Varshavsky A. A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein. Science 1989;243:1576-1583.
-
(1989)
Science
, vol.243
, pp. 1576-1583
-
-
Chau, V.1
Tobias, J.W.2
Bachmair, A.3
Marriott, D.4
Ecker, D.J.5
Gonda, D.K.6
Varshavsky, A.7
-
42
-
-
26444602414
-
The N-terminal regulatory domain of cyclin A contains redundant ubiquitination targeting sequences and acceptor sites
-
Fung TK, Yam CH, Poon RY. The N-terminal regulatory domain of cyclin A contains redundant ubiquitination targeting sequences and acceptor sites. Cell Cycle 2005;4:1411-1420.
-
(2005)
Cell Cycle
, vol.4
, pp. 1411-1420
-
-
Fung, T.K.1
Yam, C.H.2
Poon, R.Y.3
-
43
-
-
33745742269
-
Quantitative analysis of in vitro ubiquitinated cyclin B1 reveals complex chain topology
-
Kirkpatrick DS, Hathaway NA, Hanna J, Elsasser S, Rush J, Finley D, King RW, Gygi SP. Quantitative analysis of in vitro ubiquitinated cyclin B1 reveals complex chain topology. Nat Cell Biol 2006;8:700-710.
-
(2006)
Nat Cell Biol
, vol.8
, pp. 700-710
-
-
Kirkpatrick, D.S.1
Hathaway, N.A.2
Hanna, J.3
Elsasser, S.4
Rush, J.5
Finley, D.6
King, R.W.7
Gygi, S.P.8
-
44
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame C, Higgins DG, Heringa J. T-Coffee: A novel method for fast and accurate multiple sequence alignment. J Mol Biol 2000;302:205-217.
-
(2000)
J Mol Biol
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
45
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein J. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 1985;39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
46
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 1987;4:406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
47
-
-
11144227907
-
Solution structure of the Kaposi's sarcoma-associated herpesvirus K3 N-terminal domain reveals a novel E2-binding C4HC3-type RING domain
-
Dodd RB, Allen MD, Brown SE, Sanderson CM, Duncan LM, Lehner PJ, Bycroft M, Read RJ. Solution structure of the Kaposi's sarcoma-associated herpesvirus K3 N-terminal domain reveals a novel E2-binding C4HC3-type RING domain. J Biol Chem 2004;279:53840-53847.
-
(2004)
J Biol Chem
, vol.279
, pp. 53840-53847
-
-
Dodd, R.B.1
Allen, M.D.2
Brown, S.E.3
Sanderson, C.M.4
Duncan, L.M.5
Lehner, P.J.6
Bycroft, M.7
Read, R.J.8
-
48
-
-
33646147146
-
Lysine-63-linked ubiquitination is required for endolysosomal degradation of class I molecules
-
Duncan LM, Piper S, Dodd RB, Saville MK, Sanderson CM, Luzio JP, Lehner PJ. Lysine-63-linked ubiquitination is required for endolysosomal degradation of class I molecules. EMBO J 2006;25:1635-1645.
-
(2006)
EMBO J
, vol.25
, pp. 1635-1645
-
-
Duncan, L.M.1
Piper, S.2
Dodd, R.B.3
Saville, M.K.4
Sanderson, C.M.5
Luzio, J.P.6
Lehner, P.J.7
-
49
-
-
33748695504
-
Kaposi sarcoma herpesvirus K5 removes CD31/PECAM from endothelial cells
-
Mansouri M, Douglas J, Rose PP, Gouveia K, Thomas G, Means RE, Moses AV, Fruh K. Kaposi sarcoma herpesvirus K5 removes CD31/PECAM from endothelial cells. Blood 2006;108:1932-1940.
-
(2006)
Blood
, vol.108
, pp. 1932-1940
-
-
Mansouri, M.1
Douglas, J.2
Rose, P.P.3
Gouveia, K.4
Thomas, G.5
Means, R.E.6
Moses, A.V.7
Fruh, K.8
-
50
-
-
68549131920
-
Remodeling of endothelial adherens junctions by Kaposi's sarcoma herpesvirus
-
Mansouri M, Rose PP, Moses AV, Fruh K. Remodeling of endothelial adherens junctions by Kaposi's sarcoma herpesvirus. J Virol 2008;82:223-231.
-
(2008)
J Virol
, vol.82
, pp. 223-231
-
-
Mansouri, M.1
Rose, P.P.2
Moses, A.V.3
Fruh, K.4
-
52
-
-
0033536637
-
The tyrosine kinase negative regulator c-Cbl as a RING-type, E2-dependent ubiquitin-protein ligase
-
Joazeiro CA, Wing SS, Huang H, Leverson JD, Hunter T, Liu YC. The tyrosine kinase negative regulator c-Cbl as a RING-type, E2-dependent ubiquitin-protein ligase. Science 1999;286:309-312.
-
(1999)
Science
, vol.286
, pp. 309-312
-
-
Joazeiro, C.A.1
Wing, S.S.2
Huang, H.3
Leverson, J.D.4
Hunter, T.5
Liu, Y.C.6
-
53
-
-
0035945349
-
A novel class of herpesvirus-encoded membrane-bound E3 ubiquitin ligases regulates endocytosis of proteins involved in immune recognition
-
Coscoy L, Sanchez DJ, Ganem D. A novel class of herpesvirus-encoded membrane-bound E3 ubiquitin ligases regulates endocytosis of proteins involved in immune recognition. J Cell Biol 2001;155:1265-1273.
-
(2001)
J Cell Biol
, vol.155
, pp. 1265-1273
-
-
Coscoy, L.1
Sanchez, D.J.2
Ganem, D.3
-
54
-
-
33845991518
-
Determinants of RING-E2 fidelity for Hrd1p, a membrane-anchored ubiquitin ligase
-
Bazirgan OA, Garza RM, Hampton RY. Determinants of RING-E2 fidelity for Hrd1p, a membrane-anchored ubiquitin ligase. J Biol Chem 2006;281:38989-39001.
-
(2006)
J Biol Chem
, vol.281
, pp. 38989-39001
-
-
Bazirgan, O.A.1
Garza, R.M.2
Hampton, R.Y.3
-
55
-
-
0035807839
-
The tumor autocrine motility factor receptor, gp78, is a ubiquitin protein ligase implicated in degradation from the endoplasmic reticulum
-
Fang S, Ferrone M, Yang C, Jensen JP, Tiwari S, Weissman AM. The tumor autocrine motility factor receptor, gp78, is a ubiquitin protein ligase implicated in degradation from the endoplasmic reticulum. Proc Natl Acad Sci U S A 2001;98:14422-14427.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 14422-14427
-
-
Fang, S.1
Ferrone, M.2
Yang, C.3
Jensen, J.P.4
Tiwari, S.5
Weissman, A.M.6
-
56
-
-
0033485869
-
The E2-E3 interaction in the N-end rule pathway: The RING-H2 finger of E3 is required for the synthesis of multiubiquitin chain
-
Xie Y, Varshavsky A. The E2-E3 interaction in the N-end rule pathway: the RING-H2 finger of E3 is required for the synthesis of multiubiquitin chain. EMBO J 1999;18:6832-6844.
-
(1999)
EMBO J
, vol.18
, pp. 6832-6844
-
-
Xie, Y.1
Varshavsky, A.2
-
57
-
-
0034682718
-
Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases
-
Zheng N, Wang P, Jeffrey PD, Pavletich NP. Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases. Cell 2000;102:533-539.
-
(2000)
Cell
, vol.102
, pp. 533-539
-
-
Zheng, N.1
Wang, P.2
Jeffrey, P.D.3
Pavletich, N.P.4
-
58
-
-
37749032764
-
Requirements for the selective degradation of CD4 receptor molecules by the human immunodeficiency virus type 1 Vpu protein in the endoplasmic reticulum
-
Binette J, Dube M, Mercier J, Halawani D, Latterich M, Cohen EA. Requirements for the selective degradation of CD4 receptor molecules by the human immunodeficiency virus type 1 Vpu protein in the endoplasmic reticulum. Retrovirology 2007;4:75.
-
(2007)
Retrovirology
, vol.4
, pp. 75
-
-
Binette, J.1
Dube, M.2
Mercier, J.3
Halawani, D.4
Latterich, M.5
Cohen, E.A.6
-
59
-
-
38049059937
-
Apoptosis induction by Bid requires unconventional ubiquitination and degradation of its N-terminal fragment
-
Tait SW, de Vries E, Maas C, Keller AM, D'Santos CS, Borst J. Apoptosis induction by Bid requires unconventional ubiquitination and degradation of its N-terminal fragment. J Cell Biol 2007;179:1453-1466.
-
(2007)
J Cell Biol
, vol.179
, pp. 1453-1466
-
-
Tait, S.W.1
de Vries, E.2
Maas, C.3
Keller, A.M.4
D'Santos, C.S.5
Borst, J.6
-
60
-
-
0033601349
-
The role of multiubiquitination in dislocation and degradation of the alpha subunit of the T cell antigen receptor
-
Yu H, Kopito RR. The role of multiubiquitination in dislocation and degradation of the alpha subunit of the T cell antigen receptor. J Biol Chem 1999;274:36852-36858.
-
(1999)
J Biol Chem
, vol.274
, pp. 36852-36858
-
-
Yu, H.1
Kopito, R.R.2
-
61
-
-
35748954927
-
Ubiquitination of mammalian Pex5p, the peroxisomal import receptor
-
Carvalho AF, Pinto MP, Grou CP, Alencastre IS, Fransen M, Sa-Miranda C, Azevedo JE. Ubiquitination of mammalian Pex5p, the peroxisomal import receptor. J Biol Chem 2007;282:31267-31272.
-
(2007)
J Biol Chem
, vol.282
, pp. 31267-31272
-
-
Carvalho, A.F.1
Pinto, M.P.2
Grou, C.P.3
Alencastre, I.S.4
Fransen, M.5
Sa-Miranda, C.6
Azevedo, J.E.7
-
62
-
-
34247487864
-
Ubiquitination of the peroxisomal import receptor Pex5p is required for its recycling
-
Platta HW, El MF, Schlee D, Grunau S, Girzalsky W, Erdmann R. Ubiquitination of the peroxisomal import receptor Pex5p is required for its recycling. J Cell Biol 2007;177:197-204.
-
(2007)
J Cell Biol
, vol.177
, pp. 197-204
-
-
Platta, H.W.1
El, M.F.2
Schlee, D.3
Grunau, S.4
Girzalsky, W.5
Erdmann, R.6
-
63
-
-
49449096720
-
Pex10p functions as an E3 ligase for the Ubc4p-dependent ubiquitination of Pex5p
-
Williams C, van den BM, Geers E, Distel B. Pex10p functions as an E3 ligase for the Ubc4p-dependent ubiquitination of Pex5p. Biochem Biophys Res Commun 2008;374:620-624.
-
(2008)
Biochem Biophys Res Commun
, vol.374
, pp. 620-624
-
-
Williams, C.1
van den, B.M.2
Geers, E.3
Distel, B.4
-
64
-
-
33845628859
-
Ubiquitin transfer from the E2 perspective: Why is UbcH5 so promiscuous?
-
Brzovic PS, Klevit RE. Ubiquitin transfer from the E2 perspective: Why is UbcH5 so promiscuous? Cell Cycle 2006;5:2867-2873.
-
(2006)
Cell Cycle
, vol.5
, pp. 2867-2873
-
-
Brzovic, P.S.1
Klevit, R.E.2
-
65
-
-
47249159844
-
Members of the E2D (UbcH5) family mediate the ubiquitination of the conserved cysteine of Pex5p, the peroxisomal import receptor
-
Grou CP, Carvalho AF, Pinto MP, Wiese S, Piechura H, Meyer HE, Warscheid B, Sa-Miranda C, Azevedo JE. Members of the E2D (UbcH5) family mediate the ubiquitination of the conserved cysteine of Pex5p, the peroxisomal import receptor. J Biol Chem 2008;283:14190-14197.
-
(2008)
J Biol Chem
, vol.283
, pp. 14190-14197
-
-
Grou, C.P.1
Carvalho, A.F.2
Pinto, M.P.3
Wiese, S.4
Piechura, H.5
Meyer, H.E.6
Warscheid, B.7
Sa-Miranda, C.8
Azevedo, J.E.9
-
66
-
-
0023084783
-
Analysis of mutation in human cells by using an Epstein-Barr virus shuttle system
-
DuBridge RB, Tang P, Hsia HC, Leong PM, Miller JH, Calos MP. Analysis of mutation in human cells by using an Epstein-Barr virus shuttle system. Mol Cell Biol 1987;7:379-387.
-
(1987)
Mol Cell Biol
, vol.7
, pp. 379-387
-
-
DuBridge, R.B.1
Tang, P.2
Hsia, H.C.3
Leong, P.M.4
Miller, J.H.5
Calos, M.P.6
-
67
-
-
0030738667
-
Complete sequence and genomic analysis of murine gammaherpesvirus 68
-
Virgin HW, Latreille P, Wamsley P, Hallsworth K, Weck KE, Dal Canto AJ, Speck SH. Complete sequence and genomic analysis of murine gammaherpesvirus 68. J Virol 1997;71:5894-5904.
-
(1997)
J Virol
, vol.71
, pp. 5894-5904
-
-
Virgin, H.W.1
Latreille, P.2
Wamsley, P.3
Hallsworth, K.4
Weck, K.E.5
Dal Canto, A.J.6
Speck, S.H.7
-
68
-
-
0024556150
-
Engineering hybrid genes without the use of restriction enzymes: Gene splicing by overlap extension
-
Horton RM, Hunt HD, Ho SN, Pullen JK, Pease LR. Engineering hybrid genes without the use of restriction enzymes: Gene splicing by overlap extension. Gene 1989;77:61-68.
-
(1989)
Gene
, vol.77
, pp. 61-68
-
-
Horton, R.M.1
Hunt, H.D.2
Ho, S.N.3
Pullen, J.K.4
Pease, L.R.5
-
69
-
-
0036190579
-
Physical association of the K3 protein of gamma-2 herpesvirus 68 with major histocompatibility complex class I molecules with impaired peptide and beta(2)-microglobulin assembly
-
Yu YY, Harris MR, Lybarger L, Kimpler LA, Myers NB, Virgin HW, Hansen TH. Physical association of the K3 protein of gamma-2 herpesvirus 68 with major histocompatibility complex class I molecules with impaired peptide and beta(2)-microglobulin assembly. J Virol 2002;76:2796-2803.
-
(2002)
J Virol
, vol.76
, pp. 2796-2803
-
-
Yu, Y.Y.1
Harris, M.R.2
Lybarger, L.3
Kimpler, L.A.4
Myers, N.B.5
Virgin, H.W.6
Hansen, T.H.7
-
70
-
-
0035167960
-
Polyubiquitination is required for US11-dependent movement of MHC class I heavy chain from endoplasmic reticulum into cytosol
-
Shamu CE, Flierman D, Ploegh HL, Rapoport TA, Chau V. Polyubiquitination is required for US11-dependent movement of MHC class I heavy chain from endoplasmic reticulum into cytosol. Mol Biol Cell 2001;12:2546-2555.
-
(2001)
Mol Biol Cell
, vol.12
, pp. 2546-2555
-
-
Shamu, C.E.1
Flierman, D.2
Ploegh, H.L.3
Rapoport, T.A.4
Chau, V.5
-
71
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M, Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 2007;24:1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
72
-
-
0000507749
-
-
Washington, DC Atlas of Protein Sequences: National Biomedical Research Foundation
-
Schwarz R, Dayhoff M. Matrices for Detecting Distant Relationships Washington, DC Atlas of Protein Sequences: National Biomedical Research Foundation 1979, pp. 353-358.
-
(1979)
Matrices for Detecting Distant Relationships
, pp. 353-358
-
-
Schwarz, R.1
Dayhoff, M.2
|