-
1
-
-
50649116450
-
Eukaryotic DNA ligases: structural and functional insights
-
Ellenberger T., and Tomkinson A.E. Eukaryotic DNA ligases: structural and functional insights. Ann. Rev. Biochem. 77 (2008) 313-338
-
(2008)
Ann. Rev. Biochem.
, vol.77
, pp. 313-338
-
-
Ellenberger, T.1
Tomkinson, A.E.2
-
2
-
-
0032960864
-
The human DNA ligase III gene encodes nuclear and mitochondrial proteins
-
Lakshmipathy U., and Campbell C. The human DNA ligase III gene encodes nuclear and mitochondrial proteins. Mol. Cell. Biol. 19 (1999) 3869-3876
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 3869-3876
-
-
Lakshmipathy, U.1
Campbell, C.2
-
3
-
-
0031045858
-
An alternative splicing event which occurs in mouse pachytene spermatocytes generates a form of DNA ligase III with distinct biochemical properties that may function in meiotic recombination
-
Mackey Z.B., Ramos W., Levin D.S., Walter C.A., McCarrey J.R., and Tomkinson A.E. An alternative splicing event which occurs in mouse pachytene spermatocytes generates a form of DNA ligase III with distinct biochemical properties that may function in meiotic recombination. Mol. Cell. Biol. 17 (1997) 989-998
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 989-998
-
-
Mackey, Z.B.1
Ramos, W.2
Levin, D.S.3
Walter, C.A.4
McCarrey, J.R.5
Tomkinson, A.E.6
-
4
-
-
0026680743
-
Mutations in the DNA ligase I gene of an individual with immunodeficiencies and cellular hypersensitivity to DNA-damaging agents
-
Barnes D.E., Tomkinson A.E., Lehmann A.R., Webster A.D., and Lindahl T. Mutations in the DNA ligase I gene of an individual with immunodeficiencies and cellular hypersensitivity to DNA-damaging agents. Cell 69 (1992) 495-503
-
(1992)
Cell
, vol.69
, pp. 495-503
-
-
Barnes, D.E.1
Tomkinson, A.E.2
Lehmann, A.R.3
Webster, A.D.4
Lindahl, T.5
-
5
-
-
0033166623
-
Identification of a defect in DNA ligase IV in a radiosensitive leukaemia patient
-
Riballo E., Critchlow S.E., Teo S.H., Doherty A.J., Priestley A., Broughton B., Kysela B., Beamish H., Plowman N., and Arlett C.F. Identification of a defect in DNA ligase IV in a radiosensitive leukaemia patient. Curr. Biol. 9 (1999) 699-702
-
(1999)
Curr. Biol.
, vol.9
, pp. 699-702
-
-
Riballo, E.1
Critchlow, S.E.2
Teo, S.H.3
Doherty, A.J.4
Priestley, A.5
Broughton, B.6
Kysela, B.7
Beamish, H.8
Plowman, N.9
Arlett, C.F.10
-
6
-
-
18244362081
-
DNA ligase IV mutations identified in patients exhibiting developmental delay and immunodeficiency
-
O'Driscoll M., Cerosaletti K.M., Girard P.M., Dai Y., Stumm M., Kysela B., Hirsch B., Gennery A., Palmer S.E., and Seidel J. DNA ligase IV mutations identified in patients exhibiting developmental delay and immunodeficiency. Mol. Cell 8 (2001) 1175-1185
-
(2001)
Mol. Cell
, vol.8
, pp. 1175-1185
-
-
O'Driscoll, M.1
Cerosaletti, K.M.2
Girard, P.M.3
Dai, Y.4
Stumm, M.5
Kysela, B.6
Hirsch, B.7
Gennery, A.8
Palmer, S.E.9
Seidel, J.10
-
7
-
-
33749821755
-
The neurodegenerative disease protein aprataxin resolves abortive DNA ligation intermediates
-
Ahel I., Rass U., El-Khamisy S.F., Katyal S., Clements P.M., McKinnon P.J., Caldecott K.W., and West S.C. The neurodegenerative disease protein aprataxin resolves abortive DNA ligation intermediates. Nature 443 (2006) 713-716
-
(2006)
Nature
, vol.443
, pp. 713-716
-
-
Ahel, I.1
Rass, U.2
El-Khamisy, S.F.3
Katyal, S.4
Clements, P.M.5
McKinnon, P.J.6
Caldecott, K.W.7
West, S.C.8
-
8
-
-
14544268980
-
Defective DNA single-strand break repair in spinocerebellar ataxia with axonal neuropathy-1
-
El-Khamisy S.F., Saifi G.M., Weinfeld M., Johansson F., Helleday T., Lupski J.R., and Caldecott K.W. Defective DNA single-strand break repair in spinocerebellar ataxia with axonal neuropathy-1. Nature 434 (2005) 108-113
-
(2005)
Nature
, vol.434
, pp. 108-113
-
-
El-Khamisy, S.F.1
Saifi, G.M.2
Weinfeld, M.3
Johansson, F.4
Helleday, T.5
Lupski, J.R.6
Caldecott, K.W.7
-
9
-
-
0032971199
-
Absence of DNA ligase IV protein in XR-1 cells: evidence for stabilization by XRCC4
-
Bryans M., Valenzano M.C., and Stamato T.D. Absence of DNA ligase IV protein in XR-1 cells: evidence for stabilization by XRCC4. Mutat. Res. 433 (1999) 53-58
-
(1999)
Mutat. Res.
, vol.433
, pp. 53-58
-
-
Bryans, M.1
Valenzano, M.C.2
Stamato, T.D.3
-
10
-
-
0028862933
-
Characterization of the XRCC1-DNA ligase III complex in vitro and its absence from mutant hamster cells
-
Caldecott K.W., Tucker J.D., Stanker L.H., and Thompson L.H. Characterization of the XRCC1-DNA ligase III complex in vitro and its absence from mutant hamster cells. Nucleic Acids Res. 23 (1995) 4836-4843
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 4836-4843
-
-
Caldecott, K.W.1
Tucker, J.D.2
Stanker, L.H.3
Thompson, L.H.4
-
11
-
-
0028157948
-
An interaction between the mammalian DNA repair protein XRCC1 and DNA ligase III
-
Caldecott K.W., McKeown C.K., Tucker J.D., Ljungquist S., and Thompson L.H. An interaction between the mammalian DNA repair protein XRCC1 and DNA ligase III. Mol. Cell. Biol. 14 (1994) 68-76
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 68-76
-
-
Caldecott, K.W.1
McKeown, C.K.2
Tucker, J.D.3
Ljungquist, S.4
Thompson, L.H.5
-
12
-
-
0032185230
-
DNA ligase IV is essential for V(D)J recombination and DNA double-strand break repair in human precursor lymphocytes
-
Grawunder U., Zimmer D., Fugmann S., Schwarz K., and Lieber M.R. DNA ligase IV is essential for V(D)J recombination and DNA double-strand break repair in human precursor lymphocytes. Mol. Cell 2 (1998) 477-484
-
(1998)
Mol. Cell
, vol.2
, pp. 477-484
-
-
Grawunder, U.1
Zimmer, D.2
Fugmann, S.3
Schwarz, K.4
Lieber, M.R.5
-
13
-
-
44849117230
-
Rational design of human DNA ligase inhbitors that target cellular DNA replication and repair
-
Chen X., Zhong S., Zhu X., Dziegielewska B., Ellenberger T., Wilson G.M., MacKerrell Jr. A.D., and Tomkinson A.E. Rational design of human DNA ligase inhbitors that target cellular DNA replication and repair. Cancer Res. 68 (2008) 3169-3177
-
(2008)
Cancer Res.
, vol.68
, pp. 3169-3177
-
-
Chen, X.1
Zhong, S.2
Zhu, X.3
Dziegielewska, B.4
Ellenberger, T.5
Wilson, G.M.6
MacKerrell Jr., A.D.7
Tomkinson, A.E.8
-
14
-
-
49449088906
-
Identification and validation of human DNA ligase inhibitors using computer-aided drug design
-
Zhong S., Chen X., Zhu X., Dziegielewska B., Bachman K.E., Ellenberger T., Ballin J.D., Wilson G.M., Tomkinson A.E., and MacKerell Jr. A.D. Identification and validation of human DNA ligase inhibitors using computer-aided drug design. J. Med. Chem. 51 (2008) 4553-4562
-
(2008)
J. Med. Chem.
, vol.51
, pp. 4553-4562
-
-
Zhong, S.1
Chen, X.2
Zhu, X.3
Dziegielewska, B.4
Bachman, K.E.5
Ellenberger, T.6
Ballin, J.D.7
Wilson, G.M.8
Tomkinson, A.E.9
MacKerell Jr., A.D.10
-
15
-
-
33745216905
-
Human DNA ligases I, III, and IV-purification and new specific assays for these enzymes
-
Chen X., Pascal J., Vijayakumar S., Wilson G.M., Ellenberger T., and Tomkinson A.E. Human DNA ligases I, III, and IV-purification and new specific assays for these enzymes. Methods Enzymol. 409 (2006) 39-52
-
(2006)
Methods Enzymol.
, vol.409
, pp. 39-52
-
-
Chen, X.1
Pascal, J.2
Vijayakumar, S.3
Wilson, G.M.4
Ellenberger, T.5
Tomkinson, A.E.6
-
16
-
-
9644289536
-
Human DNA ligase I completely encircles and partially unwinds nicked DNA
-
Pascal J.M., O'Brien P.J., Tomkinson A.E., and Ellenberger T. Human DNA ligase I completely encircles and partially unwinds nicked DNA. Nature 432 (2004) 473-478
-
(2004)
Nature
, vol.432
, pp. 473-478
-
-
Pascal, J.M.1
O'Brien, P.J.2
Tomkinson, A.E.3
Ellenberger, T.4
-
17
-
-
34247567490
-
Human DNA ligase IV and the ligase IV/XRCC4 complex: analysis of nick ligation fidelity
-
Wang Y., Lamarche B.J., and Tsai M.D. Human DNA ligase IV and the ligase IV/XRCC4 complex: analysis of nick ligation fidelity. Biochemistry 46 (2007) 4962-4976
-
(2007)
Biochemistry
, vol.46
, pp. 4962-4976
-
-
Wang, Y.1
Lamarche, B.J.2
Tsai, M.D.3
-
18
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31 (2003) 3406-3415
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
19
-
-
36848999901
-
Quantitative and comprehensive decomposition of the ion atmosphere around nucleic acids
-
Bai Y., Greenfeld M., Travers K.J., Chu V.B., Lipfert J., Doniach S., and Herschlag D. Quantitative and comprehensive decomposition of the ion atmosphere around nucleic acids. J. Am. Chem. Soc. 129 (2007) 14981-14988
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 14981-14988
-
-
Bai, Y.1
Greenfeld, M.2
Travers, K.J.3
Chu, V.B.4
Lipfert, J.5
Doniach, S.6
Herschlag, D.7
-
20
-
-
0035946973
-
Role of counterion condensation in folding of the Tetrahymena ribozyme. II. Counterion-dependence of folding kinetics
-
Heilman-Miller S.L., Pan J., Thirumalai D., and Woodson S.A. Role of counterion condensation in folding of the Tetrahymena ribozyme. II. Counterion-dependence of folding kinetics. J. Mol. Biol. 309 (2001) 57-68
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 57-68
-
-
Heilman-Miller, S.L.1
Pan, J.2
Thirumalai, D.3
Woodson, S.A.4
-
21
-
-
0028934312
-
Purification and characterization of DNA ligase III from bovine testes. Homology with DNA ligase II and vaccinia DNA ligase
-
Husain I., Tomkinson A.E., Burkhart W.A., Moyer M.B., Ramos W., Mackey Z.B., Besterman J.M., and Chen J. Purification and characterization of DNA ligase III from bovine testes. Homology with DNA ligase II and vaccinia DNA ligase. J. Biol. Chem. 270 (1995) 9683-9690
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 9683-9690
-
-
Husain, I.1
Tomkinson, A.E.2
Burkhart, W.A.3
Moyer, M.B.4
Ramos, W.5
Mackey, Z.B.6
Besterman, J.M.7
Chen, J.8
-
22
-
-
0029817836
-
DNA ligase IV from HeLa cell nuclei
-
Robins P., and Lindahl T. DNA ligase IV from HeLa cell nuclei. J. Biol. Chem. 271 (1996) 24257-24261
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 24257-24261
-
-
Robins, P.1
Lindahl, T.2
-
23
-
-
0025358680
-
Mammalian DNA ligases, catalytic domain and size of DNA ligase I
-
Tomkinson A.E., Lasko D.D., Daly G., and Lindahl T. Mammalian DNA ligases, catalytic domain and size of DNA ligase I. J. Biol. Chem. 265 (1990) 12611-12617
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 12611-12617
-
-
Tomkinson, A.E.1
Lasko, D.D.2
Daly, G.3
Lindahl, T.4
-
24
-
-
0034714199
-
Interactions of the DNA ligase IV-XRCC4 complex with DNA ends and the DNA-dependent protein kinase
-
Chen L., Trujillo K., Sung P., and Tomkinson A.E. Interactions of the DNA ligase IV-XRCC4 complex with DNA ends and the DNA-dependent protein kinase. J. Biol. Chem. 275 (2000) 26196-26205
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 26196-26205
-
-
Chen, L.1
Trujillo, K.2
Sung, P.3
Tomkinson, A.E.4
-
25
-
-
0029842307
-
Reconstitution of DNA base excision-repair with purified human proteins: interaction between DNA polymerase beta and the XRCC1 protein
-
Kubota Y., Nash R.A., Klungland A., Schar P., Barnes D.E., and Lindahl T. Reconstitution of DNA base excision-repair with purified human proteins: interaction between DNA polymerase beta and the XRCC1 protein. EMBO J. 15 (1996) 6662-6670
-
(1996)
EMBO J.
, vol.15
, pp. 6662-6670
-
-
Kubota, Y.1
Nash, R.A.2
Klungland, A.3
Schar, P.4
Barnes, D.E.5
Lindahl, T.6
-
26
-
-
0033618289
-
DNA ligase III is recruited to DNA strand breaks by a zinc finger motif homologous to that of poly(ADP-ribose) polymerase. Identification of two functionally distinct DNA binding regions within DNA ligase III
-
Mackey Z.B., Niedergang C., Murcia J.M., Leppard J., Au K., Chen J., de Murcia G., and Tomkinson A.E. DNA ligase III is recruited to DNA strand breaks by a zinc finger motif homologous to that of poly(ADP-ribose) polymerase. Identification of two functionally distinct DNA binding regions within DNA ligase III. J. Biol. Chem. 274 (1999) 21679-21687
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 21679-21687
-
-
Mackey, Z.B.1
Niedergang, C.2
Murcia, J.M.3
Leppard, J.4
Au, K.5
Chen, J.6
de Murcia, G.7
Tomkinson, A.E.8
-
28
-
-
0025790388
-
Three distinct DNA ligases in mammalian cells
-
Tomkinson A.E., Roberts E., Daly G., Totty N.F., and Lindahl T. Three distinct DNA ligases in mammalian cells. J. Biol. Chem. 266 (1991) 21728-21735
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 21728-21735
-
-
Tomkinson, A.E.1
Roberts, E.2
Daly, G.3
Totty, N.F.4
Lindahl, T.5
-
30
-
-
0342350255
-
Interaction between PCNA and DNA ligase I is critical for joining of Okazaki fragments and long-patch base-excision repair
-
Levin D.S., McKenna A.E., Motycka T.A., Matsumoto Y., and Tomkinson A.E. Interaction between PCNA and DNA ligase I is critical for joining of Okazaki fragments and long-patch base-excision repair. Curr. Biol. 10 (2000) 919-922
-
(2000)
Curr. Biol.
, vol.10
, pp. 919-922
-
-
Levin, D.S.1
McKenna, A.E.2
Motycka, T.A.3
Matsumoto, Y.4
Tomkinson, A.E.5
-
31
-
-
0042632806
-
Physical and functional interaction between DNA ligase IIIalpha and poly(ADP-Ribose) polymerase 1 in DNA single-strand break repair
-
Leppard J.B., Dong Z., Mackey Z.B., and Tomkinson A.E. Physical and functional interaction between DNA ligase IIIalpha and poly(ADP-Ribose) polymerase 1 in DNA single-strand break repair. Mol. Cell. Biol. 23 (2003) 5919-5927
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 5919-5927
-
-
Leppard, J.B.1
Dong, Z.2
Mackey, Z.B.3
Tomkinson, A.E.4
-
32
-
-
0034666329
-
The DNA ligase III zinc finger stimulates binding to DNA secondary structure and promotes end joining
-
Taylor R.M., Whitehouse C.J., and Caldecott K.W. The DNA ligase III zinc finger stimulates binding to DNA secondary structure and promotes end joining. Nucleic Acids Res. 28 (2000) 3558-3563
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3558-3563
-
-
Taylor, R.M.1
Whitehouse, C.J.2
Caldecott, K.W.3
-
33
-
-
51649128895
-
Up-regulation of WRN and DNA ligase IIIa in chronic myeloid leukemia: consequences for the repair of DNA double strand breaks
-
Sallmyr A., Tomkinson A.E., and Rassool F. Up-regulation of WRN and DNA ligase IIIa in chronic myeloid leukemia: consequences for the repair of DNA double strand breaks. Blood 112 (2008) 1413-1423
-
(2008)
Blood
, vol.112
, pp. 1413-1423
-
-
Sallmyr, A.1
Tomkinson, A.E.2
Rassool, F.3
-
34
-
-
20144363082
-
DNA ligase III as a candidate component of backup pathways of nonhomologous end joining
-
Wang H., Rosidi B., Perrault R., Wang M., Zhang L., Windhofer F., and Iliakis G. DNA ligase III as a candidate component of backup pathways of nonhomologous end joining. Cancer Res. 65 (2005) 4020-4030
-
(2005)
Cancer Res.
, vol.65
, pp. 4020-4030
-
-
Wang, H.1
Rosidi, B.2
Perrault, R.3
Wang, M.4
Zhang, L.5
Windhofer, F.6
Iliakis, G.7
-
35
-
-
0034602285
-
DNA ligase IV and XRCC4 form a stable mixed tetramer that functions synergistically with other repair factors in a cell-free end-joining system
-
Lee K.J., Huang J., Takeda Y., and Dynan W.S. DNA ligase IV and XRCC4 form a stable mixed tetramer that functions synergistically with other repair factors in a cell-free end-joining system. J. Biol. Chem. 275 (2000) 34787-34796
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 34787-34796
-
-
Lee, K.J.1
Huang, J.2
Takeda, Y.3
Dynan, W.S.4
-
36
-
-
0035903103
-
Cellular and biochemical impact of a mutation in DNA ligase IV conferring clinical radiosensitivity
-
Riballo E., Doherty A.J., Dai Y., Stiff T., Oettinger M.A., Jeggo P.A., and Kysela B. Cellular and biochemical impact of a mutation in DNA ligase IV conferring clinical radiosensitivity. J. Biol. Chem. 276 (2001) 31124-31132
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 31124-31132
-
-
Riballo, E.1
Doherty, A.J.2
Dai, Y.3
Stiff, T.4
Oettinger, M.A.5
Jeggo, P.A.6
Kysela, B.7
-
37
-
-
59649122967
-
XLF-Cernunnos promotes DNA ligase IV-XRCC4 re-adenylation following ligation
-
Riballo E., Woodbine L., Stiff T., Walker S.A., Goodarzi A.A., and Jeggo P.A. XLF-Cernunnos promotes DNA ligase IV-XRCC4 re-adenylation following ligation. Nucleic Acids Res. 37 (2009) 482-492
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 482-492
-
-
Riballo, E.1
Woodbine, L.2
Stiff, T.3
Walker, S.A.4
Goodarzi, A.A.5
Jeggo, P.A.6
|