-
1
-
-
0025295238
-
Clinical variation of autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED) in a series of 68 patients
-
Ahonen, P., S. Myllarniemi, I. Sipila, and J. Perheentupa. 1990. Clinical variation of autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED) in a series of 68 patients. N. Engl. J. Med. 322: 1829 -1836.
-
(1990)
N. Engl. J. Med
, vol.322
, pp. 1829-1836
-
-
Ahonen, P.1
Myllarniemi, S.2
Sipila, I.3
Perheentupa, J.4
-
2
-
-
16944367194
-
Positional cloning of the APECED gene
-
Nagamine, K., P. Peterson, H. S. Scott, J. Kudoh, S. Minoshima, M. Heino, K. J. Krohn, M. D. Lalioti, P. E. Mullis, S. E. Antonarakis, et al. 1997. Positional cloning of the APECED gene. Nat. Genet. 17: 393-398.
-
(1997)
Nat. Genet
, vol.17
, pp. 393-398
-
-
Nagamine, K.1
Peterson, P.2
Scott, H.S.3
Kudoh, J.4
Minoshima, S.5
Heino, M.6
Krohn, K.J.7
Lalioti, M.D.8
Mullis, P.E.9
Antonarakis, S.E.10
-
3
-
-
0037112047
-
Projection of an immunological self shadow within the thymus by the aire protein
-
Anderson, M. S., E. S. Venanzi, L. Klein, Z. Chen, S. P. Berzins, S. J. Turley, H. von Boehmer, R. Bronson, A. Dierich, C. Benoist, and D. Mathis. 2002. Projection of an immunological self shadow within the thymus by the aire protein. Science 298: 1395-1401.
-
(2002)
Science
, vol.298
, pp. 1395-1401
-
-
Anderson, M.S.1
Venanzi, E.S.2
Klein, L.3
Chen, Z.4
Berzins, S.P.5
Turley, S.J.6
von Boehmer, H.7
Bronson, R.8
Dierich, A.9
Benoist, C.10
Mathis, D.11
-
4
-
-
0037383758
-
Aire regulates negative selection of organ-specific T cells
-
Liston, A., S. Lesage, J. Wilson, L. Peltonen, and C. C. Goodnow. 2003. Aire regulates negative selection of organ-specific T cells. Nat. Immunol. 4: 350-354.
-
(2003)
Nat. Immunol
, vol.4
, pp. 350-354
-
-
Liston, A.1
Lesage, S.2
Wilson, J.3
Peltonen, L.4
Goodnow, C.C.5
-
5
-
-
7244227646
-
Gene dosage-limiting role of Aire in thymic expression, clonal deletion, and organ-specific autoimmunity
-
Liston, A., D. H. Gray, S. Lesage, A. L. Fletcher, J. Wilson, K. E. Webster, H. S. Scott, R. L. Boyd, L. Peltonen, and C. C. Goodnow. 2004. Gene dosage-limiting role of Aire in thymic expression, clonal deletion, and organ-specific autoimmunity. J. Exp. Med. 200: 1015-1026.
-
(2004)
J. Exp. Med
, vol.200
, pp. 1015-1026
-
-
Liston, A.1
Gray, D.H.2
Lesage, S.3
Fletcher, A.L.4
Wilson, J.5
Webster, K.E.6
Scott, H.S.7
Boyd, R.L.8
Peltonen, L.9
Goodnow, C.C.10
-
6
-
-
23844558032
-
The cellular mechanism of Aire control of T cell tolerance
-
Anderson, M. S., E. S. Venanzi, Z. Chen, S. P. Berzins, C. Benoist, and D. Mathis. 2005. The cellular mechanism of Aire control of T cell tolerance. Immunity 23: 227-239.
-
(2005)
Immunity
, vol.23
, pp. 227-239
-
-
Anderson, M.S.1
Venanzi, E.S.2
Chen, Z.3
Berzins, S.P.4
Benoist, C.5
Mathis, D.6
-
7
-
-
34248598295
-
+ medullary thymic epithelial cells
-
+ medullary thymic epithelial cells. Nat. Immunol. 8: 351-358.
-
(2007)
Nat. Immunol
, vol.8
, pp. 351-358
-
-
Aschenbrenner, K.1
D'Cruz, L.M.2
Vollmann, E.H.3
Hinterberger, M.4
Emmerich, J.5
Swee, L.K.6
Rolink, A.7
Klein, L.8
-
8
-
-
0033590981
-
Autoimmune regulator is expressed in the cells regulating immune tolerance in thymus medulla
-
Heino, M., P. Peterson, J. Kudoh, K. Nagamine, A. Lagerstedt, V. Ovod, A. Ranki, I. Rantala, M. Nieminen, J. Tuukkanen, et al. 1999. Autoimmune regulator is expressed in the cells regulating immune tolerance in thymus medulla. Biochem. Biophys. Res. Commun. 257: 821-825.
-
(1999)
Biochem. Biophys. Res. Commun
, vol.257
, pp. 821-825
-
-
Heino, M.1
Peterson, P.2
Kudoh, J.3
Nagamine, K.4
Lagerstedt, A.5
Ovod, V.6
Ranki, A.7
Rantala, I.8
Nieminen, M.9
Tuukkanen, J.10
-
9
-
-
0033012337
-
The mouse Aire gene: Comparative genomic sequencing, gene organization, and expression
-
Blechschmidt, K., M. Schweiger, K. Wertz, R. Poulson, H. M. Christensen, A. Rosenthal, H. Lehrach, and M. L. Yaspo. 1999. The mouse Aire gene: comparative genomic sequencing, gene organization, and expression. Genome Res. 9: 158-166.
-
(1999)
Genome Res
, vol.9
, pp. 158-166
-
-
Blechschmidt, K.1
Schweiger, M.2
Wertz, K.3
Poulson, R.4
Christensen, H.M.5
Rosenthal, A.6
Lehrach, H.7
Yaspo, M.L.8
-
10
-
-
0036498116
-
Expression of AIRE gene in peripheral monocyte/ dendritic cell lineage
-
Kogawa, K., S. Nagafuchi, H. Katsuta, J. Kudoh, S. Tamiya, Y. Sakai, N. Shimizu, and M. Harada. 2002. Expression of AIRE gene in peripheral monocyte/ dendritic cell lineage. Immunol. Lett. 80: 195-198.
-
(2002)
Immunol. Lett
, vol.80
, pp. 195-198
-
-
Kogawa, K.1
Nagafuchi, S.2
Katsuta, H.3
Kudoh, J.4
Tamiya, S.5
Sakai, Y.6
Shimizu, N.7
Harada, M.8
-
11
-
-
0035147378
-
Subcellular location and expression pattern of autoimmune regulator (Aire), the mouse orthologue for human gene defective in autoimmune polyendocrinopathy candidiasis ectodermal dystrophy (APECED)
-
Halonen, M., M. Pelto-Huikko, P. Eskelin, L. Peltonen, I. Ulmanen, and M. Kolmer. 2001. Subcellular location and expression pattern of autoimmune regulator (Aire), the mouse orthologue for human gene defective in autoimmune polyendocrinopathy candidiasis ectodermal dystrophy (APECED). J. Histochem. Cytochem. 49: 197-208.
-
(2001)
J. Histochem. Cytochem
, vol.49
, pp. 197-208
-
-
Halonen, M.1
Pelto-Huikko, M.2
Eskelin, P.3
Peltonen, L.4
Ulmanen, I.5
Kolmer, M.6
-
12
-
-
33846546257
-
Peripheral antigen display by lymph node stroma promotes T cell tolerance to intestinal self
-
Lee, J. W., M. Epardaud, J. Sun, J. E. Becker, A. C. Cheng, A. R. Yonekura, J. K. Heath, and S. J. Turley. 2007. Peripheral antigen display by lymph node stroma promotes T cell tolerance to intestinal self. Nat. Immunol. 8: 181-190.
-
(2007)
Nat. Immunol
, vol.8
, pp. 181-190
-
-
Lee, J.W.1
Epardaud, M.2
Sun, J.3
Becker, J.E.4
Cheng, A.C.5
Yonekura, A.R.6
Heath, J.K.7
Turley, S.J.8
-
13
-
-
49449093723
-
Deletional tolerance mediated by extrathymic Aire-expressing cells
-
Gardner, J. M., J. J. Devoss, R. S. Friedman, D. J. Wong, Y. X. Tan, X. Zhou, K. P. Johannes, M. A. Su, H. Y. Chang, M. F. Krummel, and M. S. Anderson. 2008. Deletional tolerance mediated by extrathymic Aire-expressing cells. Science 321: 843-847.
-
(2008)
Science
, vol.321
, pp. 843-847
-
-
Gardner, J.M.1
Devoss, J.J.2
Friedman, R.S.3
Wong, D.J.4
Tan, Y.X.5
Zhou, X.6
Johannes, K.P.7
Su, M.A.8
Chang, H.Y.9
Krummel, M.F.10
Anderson, M.S.11
-
14
-
-
44849114330
-
A specific anti-Aire antibody reveals Aire expression is restricted to medullary thymic epithelial cells and not expressed in periphery
-
Hubert, F. X., S. A. Kinkel, K. E. Webster, P. Cannon, P. E. Crewther, A. I. Proeitto, L. Wu, W. R. Heath, and H. S. Scott. 2008. A specific anti-Aire antibody reveals Aire expression is restricted to medullary thymic epithelial cells and not expressed in periphery. J. Immunol. 180: 3824-3832.
-
(2008)
J. Immunol
, vol.180
, pp. 3824-3832
-
-
Hubert, F.X.1
Kinkel, S.A.2
Webster, K.E.3
Cannon, P.4
Crewther, P.E.5
Proeitto, A.I.6
Wu, L.7
Heath, W.R.8
Scott, H.S.9
-
15
-
-
0038824426
-
The autoimmune regulator protein has transcriptional transactivating properties and interacts with the common coactivator CREB-binding protein
-
Pitkanen, J., V. Doucas, T. Sternsdorf, T. Nakajima, S. Aratani, K. Jensen, H. Will, P. Vahamurto, J. Ollila, M. Vihinen, et al. 2000. The autoimmune regulator protein has transcriptional transactivating properties and interacts with the common coactivator CREB-binding protein. J. Biol. Chem. 275: 16802-16809.
-
(2000)
J. Biol. Chem
, vol.275
, pp. 16802-16809
-
-
Pitkanen, J.1
Doucas, V.2
Sternsdorf, T.3
Nakajima, T.4
Aratani, S.5
Jensen, K.6
Will, H.7
Vahamurto, P.8
Ollila, J.9
Vihinen, M.10
-
16
-
-
1642500086
-
AIRE functions as an E3 ubiquitin ligase
-
Uchida, D., S. Hatakeyama, A. Matsushima, H. Han, S. Ishido, H. Hotta, J. Kudoh, N. Shimizu, V. Doucas, K. I. Nakayama, et al. 2004. AIRE functions as an E3 ubiquitin ligase. J. Exp. Med. 199: 167-172.
-
(2004)
J. Exp. Med
, vol.199
, pp. 167-172
-
-
Uchida, D.1
Hatakeyama, S.2
Matsushima, A.3
Han, H.4
Ishido, S.5
Hotta, H.6
Kudoh, J.7
Shimizu, N.8
Doucas, V.9
Nakayama, K.I.10
-
17
-
-
45849137524
-
-
Org, T., F. Chignola, C. Hetenyi, M. Gaetani, A. Rebane, I. Liiv, U. Maran, L. Mollica, M. J. Bottomley, G. Musco, and P. Peterson. 2008. The autoimmune regulator PHD finger binds to non-methylated histone H3K4 to activate gene expression. EMBO Rep. 9: 370-376.
-
Org, T., F. Chignola, C. Hetenyi, M. Gaetani, A. Rebane, I. Liiv, U. Maran, L. Mollica, M. J. Bottomley, G. Musco, and P. Peterson. 2008. The autoimmune regulator PHD finger binds to non-methylated histone H3K4 to activate gene expression. EMBO Rep. 9: 370-376.
-
-
-
-
18
-
-
38349110211
-
AIRE's CARD revealed, a new structure for central tolerance provokes transcriptional plasticity
-
Ferguson, B. J., C. Alexander, S. W. Rossi, I. Liiv, A. Rebane, C. L. Worth, J. Wong, M. Laan, P. Peterson, E. J. Jenkinson, et al. 2008. AIRE's CARD revealed, a new structure for central tolerance provokes transcriptional plasticity. J. Biol. Chem. 283: 1723-1731.
-
(2008)
J. Biol. Chem
, vol.283
, pp. 1723-1731
-
-
Ferguson, B.J.1
Alexander, C.2
Rossi, S.W.3
Liiv, I.4
Rebane, A.5
Worth, C.L.6
Wong, J.7
Laan, M.8
Peterson, P.9
Jenkinson, E.J.10
-
19
-
-
13544262691
-
Development of autoimmunity against transcriptionally unrepressed target antigen in the thymus of Aire-deficient mice
-
Kuroda, N., T. Mitani, N. Takeda, N. Ishimaru, R. Arakaki, Y. Hayashi, Y. Bando, K. Izumi, T. Takahashi, T. Nomura, et al. 2005. Development of autoimmunity against transcriptionally unrepressed target antigen in the thymus of Aire-deficient mice. J. Immunol. 174: 1862-1870.
-
(2005)
J. Immunol
, vol.174
, pp. 1862-1870
-
-
Kuroda, N.1
Mitani, T.2
Takeda, N.3
Ishimaru, N.4
Arakaki, R.5
Hayashi, Y.6
Bando, Y.7
Izumi, K.8
Takahashi, T.9
Nomura, T.10
-
20
-
-
25144432460
-
Modifier loci condition autoimmunity provoked by Aire deficiency
-
Jiang, W., M. S. Anderson, R. Bronson, D. Mathis, and C. Benoist. 2005. Modifier loci condition autoimmunity provoked by Aire deficiency. J. Exp. Med. 202: 805-815.
-
(2005)
J. Exp. Med
, vol.202
, pp. 805-815
-
-
Jiang, W.1
Anderson, M.S.2
Bronson, R.3
Mathis, D.4
Benoist, C.5
-
21
-
-
33749524196
-
Aire deficient mice do not develop the same profile of tissue-specific autoantibodies as APECED patients
-
Pontynen, N., A. Miettinen, T. P. Arstila, O. Kampe, M. Alimohammadi, O. Vaarala, L. Peltonen, and I. Ulmanen. 2006. Aire deficient mice do not develop the same profile of tissue-specific autoantibodies as APECED patients. J. Autoimmun. 27: 96-104.
-
(2006)
J. Autoimmun
, vol.27
, pp. 96-104
-
-
Pontynen, N.1
Miettinen, A.2
Arstila, T.P.3
Kampe, O.4
Alimohammadi, M.5
Vaarala, O.6
Peltonen, L.7
Ulmanen, I.8
-
22
-
-
0037084784
-
Aire deficient mice develop multiple features of APECED phenotype and show altered immune response
-
Ramsey, C., O. Winqvist, L. Puhakka, M. Halonen, A. Moro, O. Kampe, P. Eskelin, M. Pelto-Huikko, and L. Peltonen. 2002. Aire deficient mice develop multiple features of APECED phenotype and show altered immune response. Hum. Mol. Genet. 11: 397-409.
-
(2002)
Hum. Mol. Genet
, vol.11
, pp. 397-409
-
-
Ramsey, C.1
Winqvist, O.2
Puhakka, L.3
Halonen, M.4
Moro, A.5
Kampe, O.6
Eskelin, P.7
Pelto-Huikko, M.8
Peltonen, L.9
-
23
-
-
33646413687
-
Alteration of intra-pancreatic target-organ specificity by abrogation of Aire in NOD mice
-
Niki, S., K. Oshikawa, Y. Mouri, F. Hirota, A. Matsushima, M. Yano, H. Han, Y. Bando, K. Izumi, M. Matsumoto, et al. 2006. Alteration of intra-pancreatic target-organ specificity by abrogation of Aire in NOD mice. J. Clin. Invest. 116: 1292-1301.
-
(2006)
J. Clin. Invest
, vol.116
, pp. 1292-1301
-
-
Niki, S.1
Oshikawa, K.2
Mouri, Y.3
Hirota, F.4
Matsushima, A.5
Yano, M.6
Han, H.7
Bando, Y.8
Izumi, K.9
Matsumoto, M.10
-
24
-
-
43049128502
-
Mechanisms of an autoimmunity syndrome in mice caused by a dominant mutation in Aire
-
Su, M. A., K. Giang, K. Zumer, H. Jiang, I. Oven, J. L. Rinn, J. J. Devoss, K. P. Johannes, W. Lu, J. Gardner, et al. 2008. Mechanisms of an autoimmunity syndrome in mice caused by a dominant mutation in Aire. J. Clin. Invest. 118: 1712-1726.
-
(2008)
J. Clin. Invest
, vol.118
, pp. 1712-1726
-
-
Su, M.A.1
Giang, K.2
Zumer, K.3
Jiang, H.4
Oven, I.5
Rinn, J.L.6
Devoss, J.J.7
Johannes, K.P.8
Lu, W.9
Gardner, J.10
-
25
-
-
0034869235
-
APECED mutations in the autoimmune regulator (AIRE) gene
-
Heino, M., P. Peterson, J. Kudoh, N. Shimizu, S. E. Antonarakis, H. S. Scott, and K. Krohn. 2001. APECED mutations in the autoimmune regulator (AIRE) gene. Hum. Mutat. 18: 205-211.
-
(2001)
Hum. Mutat
, vol.18
, pp. 205-211
-
-
Heino, M.1
Peterson, P.2
Kudoh, J.3
Shimizu, N.4
Antonarakis, S.E.5
Scott, H.S.6
Krohn, K.7
-
26
-
-
0032230236
-
Common mutations in autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy patients of different origins
-
Scott, H. S., M. Heino, P. Peterson, L. Mittaz, M. D. Lalioti, C. Betterle, A. Cohen, M. Seri, M. Lerone, G. Romeo, et al. 1998. Common mutations in autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy patients of different origins. Mol. Endocrinol. 12: 1112-1119.
-
(1998)
Mol. Endocrinol
, vol.12
, pp. 1112-1119
-
-
Scott, H.S.1
Heino, M.2
Peterson, P.3
Mittaz, L.4
Lalioti, M.D.5
Betterle, C.6
Cohen, A.7
Seri, M.8
Lerone, M.9
Romeo, G.10
-
27
-
-
0032924111
-
AIRE encodes a nuclear protein co-localizing with cytoskeletal filaments: Altered sub-cellular distribution of mutants lacking the PHD zinc fingers
-
Rinderle, C., H. M. Christensen, S. Schweiger, H. Lehrach, and M. L. Yaspo. 1999. AIRE encodes a nuclear protein co-localizing with cytoskeletal filaments: altered sub-cellular distribution of mutants lacking the PHD zinc fingers. Hum. Mol. Genet. 8: 277-290.
-
(1999)
Hum. Mol. Genet
, vol.8
, pp. 277-290
-
-
Rinderle, C.1
Christensen, H.M.2
Schweiger, S.3
Lehrach, H.4
Yaspo, M.L.5
-
28
-
-
0242536432
-
Mutations in the AIRE gene: Effects on subcellular location and transactivation function of the autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy protein
-
Bjorses, P., M. Halonen, J. J. Palvimo, M. Kolmer, J. Aaltonen, P. Ellonen, J. Perheentupa, I. Ulmanen, and L. Peltonen. 2000. Mutations in the AIRE gene: effects on subcellular location and transactivation function of the autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy protein. Am. J. Hum. Genet. 66: 378-392.
-
(2000)
Am. J. Hum. Genet
, vol.66
, pp. 378-392
-
-
Bjorses, P.1
Halonen, M.2
Palvimo, J.J.3
Kolmer, M.4
Aaltonen, J.5
Ellonen, P.6
Perheentupa, J.7
Ulmanen, I.8
Peltonen, L.9
-
29
-
-
0037115481
-
Systematic mutagenesis of the functional domains of AIRE reveals their role in intracellular targeting
-
Ramsey, C., A. Bukrinsky, and L. Peltonen. 2002. Systematic mutagenesis of the functional domains of AIRE reveals their role in intracellular targeting. Hum. Mol. Genet. 11: 3299-3308.
-
(2002)
Hum. Mol. Genet
, vol.11
, pp. 3299-3308
-
-
Ramsey, C.1
Bukrinsky, A.2
Peltonen, L.3
-
30
-
-
0036470005
-
Analysis of thymic stromal cell populations using flow cytometry
-
Gray, D. H., A. P. Chidgey, and R. L. Boyd. 2002. Analysis of thymic stromal cell populations using flow cytometry. J. Immunol. Methods 260: 15-28.
-
(2002)
J. Immunol. Methods
, vol.260
, pp. 15-28
-
-
Gray, D.H.1
Chidgey, A.P.2
Boyd, R.L.3
-
31
-
-
0027251463
-
The sizes of the CDR3 hypervariable regions of the murine T-cell receptor beta chains vary as a function of the recombined germ-line segments
-
Pannetier, C., M. Cochet, S. Darche, A. Casrouge, M. Zoller, and P. Kourilsky. 1993. The sizes of the CDR3 hypervariable regions of the murine T-cell receptor beta chains vary as a function of the recombined germ-line segments. Proc. Natl. Acad. Sci. USA 90: 4319-4323.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 4319-4323
-
-
Pannetier, C.1
Cochet, M.2
Darche, S.3
Casrouge, A.4
Zoller, M.5
Kourilsky, P.6
-
32
-
-
0034652317
-
Early expression of antiinsulin autoantibodies of humans and the NOD mouse: Evidence for early determination of subsequent diabetes
-
Yu, L., D. T. Robles, N. Abiru, P. Kaur, M. Rewers, K. Kelemen, and G. S. Eisenbarth. 2000. Early expression of antiinsulin autoantibodies of humans and the NOD mouse: evidence for early determination of subsequent diabetes. Proc. Natl. Acad. Sci. USA 97: 1701-1706.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 1701-1706
-
-
Yu, L.1
Robles, D.T.2
Abiru, N.3
Kaur, P.4
Rewers, M.5
Kelemen, K.6
Eisenbarth, G.S.7
-
33
-
-
0036498813
-
Biological assays for interferons
-
Meager, A. 2002. Biological assays for interferons. J. Immunol. Methods 261: 21-36.
-
(2002)
J. Immunol. Methods
, vol.261
, pp. 21-36
-
-
Meager, A.1
-
34
-
-
0019282140
-
An analysis of neutralization reaction of interferon by anti-body: A proposal on the expression of neutralization titer
-
Kawade, Y. 1980. An analysis of neutralization reaction of interferon by anti-body: a proposal on the expression of neutralization titer. J. Interferon Res. 1: 61-70.
-
(1980)
J. Interferon Res
, vol.1
, pp. 61-70
-
-
Kawade, Y.1
-
35
-
-
12344280017
-
Summaries of Affymetrix Gene Chip probe level data
-
Irizarry, R. A., B. M. Bolstad, F. Collin, L. M. Cope, B. Hobbs, and T. P. Speed. 2003. Summaries of Affymetrix Gene Chip probe level data. Nucleic Acids Res. 31: e15.
-
(2003)
Nucleic Acids Res
, vol.31
-
-
Irizarry, R.A.1
Bolstad, B.M.2
Collin, F.3
Cope, L.M.4
Hobbs, B.5
Speed, T.P.6
-
36
-
-
28744458859
-
Bioconductor: Open software development for computational biology and bioinformatics
-
Gentleman, R. C., V. J. Carey, D. M. Bates, B. Bolstad, M. Dettling, S. Dudoit, B. Ellis, L. Gautier, Y. Ge, J. Gentry, et al. 2004. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 5: R80.
-
(2004)
Genome Biol
, vol.5
-
-
Gentleman, R.C.1
Carey, V.J.2
Bates, D.M.3
Bolstad, B.4
Dettling, M.5
Dudoit, S.6
Ellis, B.7
Gautier, L.8
Ge, Y.9
Gentry, J.10
-
37
-
-
4544341015
-
-
Smyth, G. K. 2004. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3: article 3.
-
Smyth, G. K. 2004. Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3: article 3.
-
-
-
-
38
-
-
33751223190
-
Complex expression patterns support potential roles for maternally derived activins in the establishment of pregnancy in mouse
-
Jones, R. L., T. J. Kaitu'u-Lino, G. Nie, L. G. Sanchez-Partida, J. K. Findlay, and L. A. Salamonsen. 2006. Complex expression patterns support potential roles for maternally derived activins in the establishment of pregnancy in mouse. Reproduction 132: 799-810.
-
(2006)
Reproduction
, vol.132
, pp. 799-810
-
-
Jones, R.L.1
Kaitu'u-Lino, T.J.2
Nie, G.3
Sanchez-Partida, L.G.4
Findlay, J.K.5
Salamonsen, L.A.6
-
39
-
-
0036156056
-
+ T lymphocytes in recovery from oropharyngeal candidiasis
-
+ T lymphocytes in recovery from oropharyngeal candidiasis. Infect. Immun. 70: 724-731.
-
(2002)
Infect. Immun
, vol.70
, pp. 724-731
-
-
Farah, C.S.1
Elahi, S.2
Drysdale, K.3
Pang, G.4
Gotjamanos, T.5
Seymour, G.J.6
Clancy, R.L.7
Ashman, R.B.8
-
40
-
-
22344449972
-
Promiscuous gene expression in thymic epithelial cells is regulated at multiple levels
-
Derbinski, J., J. Gabler, B. Brors, S. Tierling, S. Jonnakuty, M. Hergenhahn, L. Peltonen, J. Walter, and B. Kyewski. 2005. Promiscuous gene expression in thymic epithelial cells is regulated at multiple levels. J. Exp. Med. 202: 33-45.
-
(2005)
J. Exp. Med
, vol.202
, pp. 33-45
-
-
Derbinski, J.1
Gabler, J.2
Brors, B.3
Tierling, S.4
Jonnakuty, S.5
Hergenhahn, M.6
Peltonen, L.7
Walter, J.8
Kyewski, B.9
-
41
-
-
33847350111
-
Aire-dependent alterations in medullary thymic epithelium indicate a role for Aire in thymic epithelial differentiation
-
Gillard, G. O., J. Dooley, M. Erickson, L. Peltonen, and A. G. Farr. 2007. Aire-dependent alterations in medullary thymic epithelium indicate a role for Aire in thymic epithelial differentiation. J. Immunol. 178: 3007-3015.
-
(2007)
J. Immunol
, vol.178
, pp. 3007-3015
-
-
Gillard, G.O.1
Dooley, J.2
Erickson, M.3
Peltonen, L.4
Farr, A.G.5
-
42
-
-
28444438159
-
Autoimmune polyendocrinopathy syndrome type 1 (APS1) and AIRE gene: New views on molecular basis of autoimmunity
-
Peterson, P., and L. Peltonen. 2005. Autoimmune polyendocrinopathy syndrome type 1 (APS1) and AIRE gene: new views on molecular basis of autoimmunity. J. Autoimmun. 25(Suppl.): 49-55.
-
(2005)
J. Autoimmun
, vol.25
, Issue.SUPPL.
, pp. 49-55
-
-
Peterson, P.1
Peltonen, L.2
-
43
-
-
33746423947
-
Anti-interferon autoantibodies in autoimmune polyendocrinopathy syndrome type 1
-
Meager, A., K. Visvalingam, P. Peterson, K. Moll, A. Murumagi, K. Krohn, P. Eskelin, J. Perheentupa, E. Husebye, Y. Kadota, and N. Willcox. 2006. Anti-interferon autoantibodies in autoimmune polyendocrinopathy syndrome type 1. PLoS Med. 3: e289.
-
(2006)
PLoS Med
, vol.3
-
-
Meager, A.1
Visvalingam, K.2
Peterson, P.3
Moll, K.4
Murumagi, A.5
Krohn, K.6
Eskelin, P.7
Perheentupa, J.8
Husebye, E.9
Kadota, Y.10
Willcox, N.11
-
44
-
-
33751513054
-
Spontaneous autoimmunity prevented by thymic expression of a single self-antigen
-
DeVoss, J., Y. Hou, K. Johannes, W. Lu, G. I. Liou, J. Rinn, H. Chang, R. R. Caspi, L. Fong, and M. S. Anderson. 2006. Spontaneous autoimmunity prevented by thymic expression of a single self-antigen. J. Exp. Med. 203: 2727-2735.
-
(2006)
J. Exp. Med
, vol.203
, pp. 2727-2735
-
-
DeVoss, J.1
Hou, Y.2
Johannes, K.3
Lu, W.4
Liou, G.I.5
Rinn, J.6
Chang, H.7
Caspi, R.R.8
Fong, L.9
Anderson, M.S.10
-
45
-
-
34248372524
-
Loss of Aire-dependent thymic expression of a peripheral tissue antigen renders it a target of autoimmunity
-
Gavanescu, I., B. Kessler, H. Ploegh, C. Benoist, and D. Mathis. 2007. Loss of Aire-dependent thymic expression of a peripheral tissue antigen renders it a target of autoimmunity. Proc. Natl. Acad. Sci. USA 104: 4583-4587.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 4583-4587
-
-
Gavanescu, I.1
Kessler, B.2
Ploegh, H.3
Benoist, C.4
Mathis, D.5
-
46
-
-
40449109084
-
Autoimmune polyendocrine syndrome type 1 and NALP5, a parathyroid autoantigen
-
Alimohammadi, M., P. Bjorklund, A. Hallgren, N. Pontynen, G. Szinnai, N. Shikama, M. P. Keller, O. Ekwall, S. A. Kinkel, E. S. Husebye, et al. 2008. Autoimmune polyendocrine syndrome type 1 and NALP5, a parathyroid autoantigen. N. Engl. J. Med. 358: 1018-1028.
-
(2008)
N. Engl. J. Med
, vol.358
, pp. 1018-1028
-
-
Alimohammadi, M.1
Bjorklund, P.2
Hallgren, A.3
Pontynen, N.4
Szinnai, G.5
Shikama, N.6
Keller, M.P.7
Ekwall, O.8
Kinkel, S.A.9
Husebye, E.S.10
-
47
-
-
0018369765
-
Salivary secretion of inorganic electrolytes
-
Young, J. A. 1979. Salivary secretion of inorganic electrolytes. Int. Rev. Physiol. 19: 1-58.
-
(1979)
Int. Rev. Physiol
, vol.19
, pp. 1-58
-
-
Young, J.A.1
-
48
-
-
0024215340
-
Sjögren syndrome and pseudolymphoma
-
Talal, N. 1988. Sjögren syndrome and pseudolymphoma. Hosp. Pract. 23: 71-75.
-
(1988)
Hosp. Pract
, vol.23
, pp. 71-75
-
-
Talal, N.1
-
50
-
-
54049121774
-
Alterations of the medullary epithelial compartment in the Aire-deficient thymus: Implications for programs of thymic epithelial differentiation
-
Dooley, J., M. Erickson, and A. G. Farr. 2008. Alterations of the medullary epithelial compartment in the Aire-deficient thymus: implications for programs of thymic epithelial differentiation. J. Immunol. 181: 5225-5232.
-
(2008)
J. Immunol
, vol.181
, pp. 5225-5232
-
-
Dooley, J.1
Erickson, M.2
Farr, A.G.3
-
51
-
-
0029091902
-
Targeted deletion of 5′HS2 of the murine beta-globin LCR reveals that it is not essential for proper regulation of the beta-globin locus
-
Fiering, S., E. Epner, K. Robinson, Y. Zhuang, A. Telling, M. Hu, D. I. Martin, T. Enver, T. J. Ley, and M. Groudine. 1995. Targeted deletion of 5′HS2 of the murine beta-globin LCR reveals that it is not essential for proper regulation of the beta-globin locus. Genes Dev. 9: 2203-2213.
-
(1995)
Genes Dev
, vol.9
, pp. 2203-2213
-
-
Fiering, S.1
Epner, E.2
Robinson, K.3
Zhuang, Y.4
Telling, A.5
Hu, M.6
Martin, D.I.7
Enver, T.8
Ley, T.J.9
Groudine, M.10
-
52
-
-
0029954767
-
Analysis of mice containing a targeted deletion of beta-globin locus control region 5′ hypersensitive site 3
-
Hug, B. A., R. L. Wesselschmidt, S. Fiering, M. A. Bender, E. Epner, M. Groudine, and T. J. Ley. 1996. Analysis of mice containing a targeted deletion of beta-globin locus control region 5′ hypersensitive site 3. Mol. Cell. Biol. 16: 2906-2912.
-
(1996)
Mol. Cell. Biol
, vol.16
, pp. 2906-2912
-
-
Hug, B.A.1
Wesselschmidt, R.L.2
Fiering, S.3
Bender, M.A.4
Epner, E.5
Groudine, M.6
Ley, T.J.7
-
53
-
-
0029847228
-
Long-range disruption of gene expression by a selectable marker cassette
-
Pham, C. T., D. M. MacIvor, B. A. Hug, J. W. Heusel, and T. J. Ley. 1996. Long-range disruption of gene expression by a selectable marker cassette. Proc. Natl. Acad. Sci. USA 93: 13090-13095.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 13090-13095
-
-
Pham, C.T.1
MacIvor, D.M.2
Hug, B.A.3
Heusel, J.W.4
Ley, T.J.5
-
54
-
-
0030786622
-
Mouse ζ- and α-globin genes: Embryonic survival, α-thalassemia, and genetic background effects
-
Leder, A., C. Daugherty, B. Whitney, and P. Leder. 1997. Mouse ζ- and α-globin genes: embryonic survival, α-thalassemia, and genetic background effects. Blood 90: 1275-1282.
-
(1997)
Blood
, vol.90
, pp. 1275-1282
-
-
Leder, A.1
Daugherty, C.2
Whitney, B.3
Leder, P.4
-
55
-
-
0032217082
-
Specific requirement for CD3ε in T cell development
-
DeJarnette, J. B., C. L. Sommers, K. Huang, K. J. Woodside, R. Emmons, K. Katz, E. W. Shores, and P. E. Love. 1998. Specific requirement for CD3ε in T cell development. Proc. Natl. Acad. Sci. USA 95: 14909-14914.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 14909-14914
-
-
DeJarnette, J.B.1
Sommers, C.L.2
Huang, K.3
Woodside, K.J.4
Emmons, R.5
Katz, K.6
Shores, E.W.7
Love, P.E.8
-
56
-
-
0036841877
-
Targeted insertion results in a rhombomere 2-specific Hoxa2 knockdown and ectopic activation of Hoxa1 expression
-
Ren, S. Y., P. O. Angrand, and F. M. Rijli. 2002. Targeted insertion results in a rhombomere 2-specific Hoxa2 knockdown and ectopic activation of Hoxa1 expression. Dev. Dyn. 225: 305-315.
-
(2002)
Dev. Dyn
, vol.225
, pp. 305-315
-
-
Ren, S.Y.1
Angrand, P.O.2
Rijli, F.M.3
-
57
-
-
0041569922
-
A retained selection cassette increases reporter gene expression without affecting tissue distribution in SPI3 knockout/GFP knock-in mice
-
Scarff, K. L., K. S. Ung, J. Sun, and P. I. Bird. 2003. A retained selection cassette increases reporter gene expression without affecting tissue distribution in SPI3 knockout/GFP knock-in mice. Genesis 36: 149-157.
-
(2003)
Genesis
, vol.36
, pp. 149-157
-
-
Scarff, K.L.1
Ung, K.S.2
Sun, J.3
Bird, P.I.4
-
58
-
-
33748748300
-
Immunophysiology of the male reproductive tract
-
3rd Ed. J. Neill and P. Wassarman, eds. Academic, San Diego, pp
-
Hedger M. P., and D. B. Hales. 2005. Immunophysiology of the male reproductive tract. In Knobil and Neill's Physiology of Reproduction, 3rd Ed. J. Neill and P. Wassarman, eds. Academic, San Diego, pp. 1195-1250.
-
(2005)
Knobil and Neill's Physiology of Reproduction
, pp. 1195-1250
-
-
Hedger, M.P.1
Hales, D.B.2
-
59
-
-
0027930787
-
Male pseudohermaphroditism caused by mutations of testicular 17β-hydroxysteroid dehydrogenase 3
-
Geissler, W. M., D. L. Davis, L. Wu, K. D. Bradshaw, S. Patel, B. B. Mendonca, K. O. Elliston, J. D. Wilson, D. W. Russell, and S. Andersson. 1994. Male pseudohermaphroditism caused by mutations of testicular 17β-hydroxysteroid dehydrogenase 3. Nat Genet 7: 34-39.
-
(1994)
Nat Genet
, vol.7
, pp. 34-39
-
-
Geissler, W.M.1
Davis, D.L.2
Wu, L.3
Bradshaw, K.D.4
Patel, S.5
Mendonca, B.B.6
Elliston, K.O.7
Wilson, J.D.8
Russell, D.W.9
Andersson, S.10
-
60
-
-
0026055914
-
Deletion of steroid 5α-reductase 2 gene in male pseudohermaphroditism
-
Andersson, S., D. M. Berman, E. P. Jenkins, and D. W. Russell. 1991. Deletion of steroid 5α-reductase 2 gene in male pseudohermaphroditism. Nature 354: 159-161.
-
(1991)
Nature
, vol.354
, pp. 159-161
-
-
Andersson, S.1
Berman, D.M.2
Jenkins, E.P.3
Russell, D.W.4
-
61
-
-
40749106576
-
Expression of Aire and the early wave of apoptosis in spermatogenesis
-
Schaller, C. E., C. L. Wang, G. Beck-Engeser, L. Goss, H. S. Scott, M. S. Anderson, and M. Wabl. 2008. Expression of Aire and the early wave of apoptosis in spermatogenesis. J. Immunol. 180: 1338-1343.
-
(2008)
J. Immunol
, vol.180
, pp. 1338-1343
-
-
Schaller, C.E.1
Wang, C.L.2
Beck-Engeser, G.3
Goss, L.4
Scott, H.S.5
Anderson, M.S.6
Wabl, M.7
-
62
-
-
34247108100
-
Interpretation of knockout experiments: The congenic footprint
-
Schalkwyk, L. C., C. Fernandes, M. W. Nash, K. Kurrikoff, E. Vasar, and S. Koks. 2007. Interpretation of knockout experiments: the congenic footprint. Genes Brain Behav. 6: 299-303.
-
(2007)
Genes Brain Behav
, vol.6
, pp. 299-303
-
-
Schalkwyk, L.C.1
Fernandes, C.2
Nash, M.W.3
Kurrikoff, K.4
Vasar, E.5
Koks, S.6
-
63
-
-
33846136092
-
Biochemical, molecular and behavioral phenotypes of Rab3A mutations in the mouse
-
Yang, S., M. Farias, D. Kapfhamer, J. Tobias, G. Grant, T. Abel, and M. Bucan. 2007. Biochemical, molecular and behavioral phenotypes of Rab3A mutations in the mouse. Genes Brain Behav. 6: 77-96.
-
(2007)
Genes Brain Behav
, vol.6
, pp. 77-96
-
-
Yang, S.1
Farias, M.2
Kapfhamer, D.3
Tobias, J.4
Grant, G.5
Abel, T.6
Bucan, M.7
-
64
-
-
35748941369
-
Proliferative arrest and rapid turnover of thymic epithelial cells expressing Aire
-
Gray, D., J. Abramson, C. Benoist, and D. Mathis. 2007. Proliferative arrest and rapid turnover of thymic epithelial cells expressing Aire. J. Exp. Med. 204: 2521-2528.
-
(2007)
J. Exp. Med
, vol.204
, pp. 2521-2528
-
-
Gray, D.1
Abramson, J.2
Benoist, C.3
Mathis, D.4
-
65
-
-
34147128054
-
Highly variable expression of tissue-restricted self-antigens in human thymus: Implications for selftolerance and autoimmunity
-
Taubert, R., J. Schwendemann, and B. Kyewski. 2007. Highly variable expression of tissue-restricted self-antigens in human thymus: implications for selftolerance and autoimmunity. Eur. J. Immunol. 37: 838-848.
-
(2007)
Eur. J. Immunol
, vol.37
, pp. 838-848
-
-
Taubert, R.1
Schwendemann, J.2
Kyewski, B.3
-
66
-
-
27844563909
-
Insulin alleles and autoimmune regulator (AIRE) gene expression both influence insulin expression in the thymus
-
Sabater, L., X. Ferrer-Francesch, M. Sospedra, P. Caro, M. Juan, and R. Pujol-Borrell. 2005. Insulin alleles and autoimmune regulator (AIRE) gene expression both influence insulin expression in the thymus. J. Autoimmun. 25: 312-318.
-
(2005)
J. Autoimmun
, vol.25
, pp. 312-318
-
-
Sabater, L.1
Ferrer-Francesch, X.2
Sospedra, M.3
Caro, P.4
Juan, M.5
Pujol-Borrell, R.6
-
67
-
-
34548100837
-
Gene regulation: Stochastic and deterministic effects in gene regulation
-
Edwards, J. R., and T. H. Bestor. 2007. Gene regulation: stochastic and deterministic effects in gene regulation. Heredity 99: 243-244.
-
(2007)
Heredity
, vol.99
, pp. 243-244
-
-
Edwards, J.R.1
Bestor, T.H.2
-
68
-
-
33748714526
-
Aire-deficient mice develop irregularities and marginal zone B-cell lymphoma
-
Hässler, S., C. Ramsey, M. C. Karlsson, D. Larsson, B. Herrmann, B. Rozell, M. Backheden, L. Peltonen, O. Kämpe, and O. Winqvist. 2007. Aire-deficient mice develop irregularities and marginal zone B-cell lymphoma. Blood 108: 1941-1948.
-
(2007)
Blood
, vol.108
, pp. 1941-1948
-
-
Hässler, S.1
Ramsey, C.2
Karlsson, M.C.3
Larsson, D.4
Herrmann, B.5
Rozell, B.6
Backheden, M.7
Peltonen, L.8
Kämpe, O.9
Winqvist, O.10
-
69
-
-
36749066715
-
-/- mice
-
-/- mice. Proc. Natl. Acad. Sci. USA 104: 18175-18180.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 18175-18180
-
-
Li, J.1
Li, Y.2
Yao, J.Y.3
Jin, R.4
Zhu, M.Z.5
Qian, X.P.6
Zhang, J.7
Fu, Y.X.8
Wu, L.9
Zhang, Y.10
Chen, W.F.11
|