Electron attachment to oligonucleotide dimers in water: Microsolvation-assisted base-stacking forms

Chemical Physics Letters

Volumn 473, Issue 4-6, 2009, Pages 213-219

  Gu, Jiande ^a   Xie, Yaoming ^b   Schaefer III, Henry F ^b  

^a SHANGHAI INSTITUTE OF MATERIA MEDICA   (China)

^b UNIVERSITY OF GEORGIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AQUEOUS SOLUTIONS; BASE-STACKING; ELECTRON ATTACHMENTS; H-BONDING NETWORKS; LOW ENERGY ELEC-TRONS; MICROSOLVATION; RADICAL ANIONS; STABLE RADICALS; STABLE STRUCTURES; WATER MOLECULES;

ELECTRONS; GENES; NEGATIVE IONS; NUCLEIC ACIDS; OLIGOMERS; OLIGONUCLEOTIDES;

DNA;

EID: 65149096055     PISSN: 00092614     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cplett.2009.03.032     Document Type: Article

References (77)

1. Boudaiffa B., Cloutier P., Hunting D., Huels M A., and Sanche L. Science 287 (2000) 1658
2. Sanche L. Eur. Phys. J. D 35 (2005) 367 and references therein
3. Simons J. Acc. Chem. Res. 39 (2006) 772 and references therein
4. Ray S.G., Daube S.S., and Naaman R.J. Proc. Natl. Acad. Sci. USA 102 (2005) 15
5. Becker D., and Sevilla M.D. In: Lett J. (Ed). Advances in Radiation Biology vol. 17 (1993), Academic Press, New York 121
6. Kelley S.O., and Barton J.K. Science 283 (1999) 375
7. Ratner M. Nature 397 (1999) 480
8. Pan X., Cloutier P., Hunting D., and Sanche L. Phys. Rev. Lett. 90 (2003) 208102
9. Caron L.G., and Sanche L. Phys. Rev. Lett. 91 (2003) 113201
10. Zheng Y., Cloutier P., Hunting D., Wagner J.R., and Sanche L. J. Am. Chem. Soc. 126 (2004) 1002
11. Zheng Y., Cloutier P., Hunting D., Wagner J.R., and Sanche L. J. Chem. Phys. 124 (2006) 064710
12. Zheng Y., Wagner J.R., and Sanche L. Phys. Rev. Lett. 96 (2006) 208101
13. Pan X., and Sanche L. Phys. Rev. Lett. 94 (2005) 198104
14. Hall D.B., Holmlin R.E., and Barton J.K. Nature 382 (1996) 731
15. Steenken S. Biol. Chem. 378 (1997) 1293
16. Taubes G. Science 275 (1997) 1420
17. Berlin Y.A., Burin A.L., and Ratner M.A. J. Am. Chem. Soc. 123 (2001) 260
18. Beljonne D., Pourtois G., Ratner M.A., and Bredas J.L. J. Am. Chem. Soc. 125 (2003) 14510
19. Ratner M. Nature 404 (2000) 137
20. Huels M.A., Hahndorf I., Illenberger E., and Sanche L. J. Chem. Phys. 108 (1998) 1309
21. Schiedt J., Weinkauf R., Neumark D.M., and Schlag E.W. Chem. Phys. 239 (1998) 511
22. Parsons B.F., Sheehan S., Yen T.A., Neumark N., Wehres D.M., and Weinkauf R. Phys. Chem. Chem. Phys. 9 (2007) 3291
23. Desfrancois D., Abdoul-Carime H., and Schermann J.P. J. Chem. Phys. 104 (1996) 7792
24. Periquet V., Moreau A., Carles S., Schermann J.P., and Desfrancois C. J. Electron. Spectrosc. Relat. Phenom. 106 (2000) 141
25. Gutowski M., Dabkowska I., Rak J., Xu S., Nilles J.M., Radisic D., and Bowen K.H. Eur. Phys. J. D 20 (2002) 431
26. Haranczyk M., Gutowski M., Li X., and Bowen K.H. Proc. Natl. Acad. Sci. USA 104 (2007) 4804
27. Haranczyk M., Gutowski M., Li X., and Bowen K.H. J. Phys. Chem. B 111 (2007) 14073
28. Radisic D., Bowen K.H., Dabkowska I., Storoniak P., Rak J., and Gutowski M. J. Am. Chem. Soc. 127 (2005) 6443
29. Richardson N.A., Wesolowski S.S., and Schaefer H.F. J. Phys. Chem. B 107 (2003) 848
30. Stokes S.T., Li X., Grubisic A., Ko Y.J., and Bowen K.H. J. Chem. Phys. 127 (2007) 084321
31. Richardson N.A., Gu J., Wang S., Xie Y., and Schaefer H.F. J. Am. Chem. Soc. 126 (2004) 4404
32. Wetmore S.D., Boyd R.J., and Eriksson L.A. Chem. Phys. Lett. 322 (2000) 129
33. Russo N., Roscano M., and Grand A. J. Comput. Chem. 21 (2000) 1243
34. Haranczyk M., and Gutowski M. Angew. Chem. Int. Ed. 44 (2005) 6585
35. Wesolowski S.S., Leininger M.L., Pentchev P.N., and Schaefer H.F. J. Am. Chem. Soc. 123 (2001) 4023-4028
36. Li X., Sevilla M.D., and Sanche L. J. Am. Chem. Soc. 125 (2003) 8916
37. Ban F., Lundqvist M.J., Boyd R.J., and Eriksson L.A. J. Am. Chem. Soc. 124 (2002) 2753
38. Rienstra-Kiracofe J.C., Tschumper G.S., Schaefer H.F., Nandi S., and Ellison G.B. Chem. Rev. 102 (2002) 231
39. Bao X., Wang J., Gu J., and Leszczynski J. Proc. Natl. Acad. Sci. USA 103 (2006) 5658
40. Gu J., Xie Y., and Schaefer H.F. J. Am. Chem. Soc. 128 (2006) 1250
41. Gu J., Wang J., and Leszczynski J. J. Am. Chem. Soc. 128 (2006) 9322
42. Gu J., Xie Y., and Schaefer H.F. Chem. Phys. Chem. 7 (2006) 1885
43. Gu J., Xie Y., and Schaefer H.F. J. Am. Chem. Soc. 127 (2005) 1053
44. Gu J., Xie Y., and Schaefer H.F. Nucl. Acid Res. 35 (2007) 5165
45. Li X., Cai Z., and Sevilla M.D. J. Phys. Chem. B 105 (2001) 10115
46. Li X., Cai Z., and Sevilla M.D. J. Phys. Chem. A 106 (2002) 9345
47. Reynisson J., and Steenken S. Phys. Chem. Chem. Phys. 4 (2002) 5353
48. Richardson N.A., Wesolowski S.S., and Schaefer H.F. J. Am. Chem. Soc. 124 (2002) 10163
49. Radisic D., Bowen K.H., Dabkowska I., Storoniak P., Rak J., and Gutowski M. J. Am. Chem. Soc. 127 (2005) 6443
50. Gu J., Xie Y., and Schaefer H.F. J. Phys. Chem. B 109 (2005) 13067
51. Gu J., Xie Y., and Schaefer H.F. J. Chem. Phys. 127 (2007) 155107
52. Gu J., Xie Y., and Schaefer H.F. J. Phys. Chem. B 110 (2006) 19696
53. Smets J., McCarthy W., and Adamowicz L. J. Phys. Chem. 100 (1996) 14655
54. Smets J., Smith D.M.A., Elkadi Y., and Adamowicz L. J. Phys. Chem. A 101 (1997) 9152
55. Dologounitcheva O., Zakrzewski V.G., and Ortiz J.V. J. Phys. Chem. A 103 (1999) 7912
56. Morgado A., Pichugin K., and Adamowicz L. Phys. Chem. Chem. Phys. 6 (2004) 2758
57. Kumar A., Mishra P.C., and Suhai S. J. Phys. Chem. A 109 (2005) 3971
58. Bao X., Sun H., Wong N., and Gu J. J. Phys. Chem. B 110 (2006) 5868
59. Bao X., Liang G., Wong N., and Gu J. J. Phys. Chem. A 111 (2007) 666
60. Colson A.O., Besler B., and Sevilla M.D. J. Phys. Chem. 97 (1993) 13852
61. Sevilla M.D., Besler B.B., and Colson A.O. J. Phys. Chem. 98 (1994) 2215
62. Hendricks J.H., Lyapustina S.A., de Clercq H.L., and Bowen K.H. J. Chem. Phys. 108 (1998) 8
63. Nugent M.L., and Adamowicz L. Mol. Phys. 103 (2005) 1467
64. Kim S., and Schaefer H.F. J. Chem. Phys. 125 (2006) 144305
65. Kim S., Wheeler S.E., and Schaefer H.F. J. Chem. Phys. 124 (2006) 204310
66. Kim S., and Schaefer H.F. J. Chem. Phys. 125 (2007) 064301
67. Kobylecka M., Jeszczynski J., and Rak J. J. Am. Chem. Soc. 130 (2008) 15683
68. Saenger W. Principles of Nucleic Acid Structure (1983), Springer-Verlag, New York
69. Becke A.D. J. Chem. Phys. 98 (1993) 5648
70. Lee C., Yang W., and Parr R.G. Phys. Rev. B 37 (1988) 785
71. Huzinaga S. J. Chem. Phys. 42 (1965) 1293
72. Dunning T.H. J. Chem. Phys. 53 (1970) 2823
73. Lee T.J., and Schaefer H.F. J. Chem. Phys. 83 (1985) 1784
74. Cossi M., Barone V., Cammi R., and Tomasi J. Chem. Phys. Lett. 255 (1996) 327
75. Reed A.E., and Schleyer P.R. J. Am. Chem. Soc. 112 (1990) 1434
76. Reed A.E., Curtiss L.A., and Weinhold F. Chem. Rev. 88 (1988) 899
77. Bachorz R.A., Klopper W., and Gutowski M. J. Chem. Phys. 126 (2007) 085101