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Volumn 5, Issue 1, 2009, Pages

Yeast genetic analysis reveals the involvement of chromatin reassembly factors in repressing HIV-1 basal transcription

Author keywords

[No Author keywords available]

Indexed keywords

CHROMATIN ASSEMBLY FACTOR 1; FUNGAL PROTEIN; MESSENGER RNA; PROTEIN CHD1; PROTEIN FACT; PROTEIN SPT6; SHORT HAIRPIN RNA; UNCLASSIFIED DRUG; CHD1 PROTEIN, HUMAN; DNA BINDING PROTEIN; HELICASE; RNA POLYMERASE II; SUPT6H PROTEIN, HUMAN; TRANSCRIPTION FACTOR;

EID: 59249106655     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1000339     Document Type: Article
Times cited : (25)

References (69)
  • 1
    • 0032087891 scopus 로고    scopus 로고
    • Transcriptional pausing at +62 of the HIV-1 nascent RNA modulates formation of the TAR RNA structure
    • Palangat M, Meier TI, Keene RG, Landick R (1998) Transcriptional pausing at +62 of the HIV-1 nascent RNA modulates formation of the TAR RNA structure. Mol Cell 1: 1033-1042.
    • (1998) Mol Cell , vol.1 , pp. 1033-1042
    • Palangat, M.1    Meier, T.I.2    Keene, R.G.3    Landick, R.4
  • 2
    • 0023513563 scopus 로고
    • Anti-termination of transcription within the long terminal repeat of HIV-1 by tat gene product
    • Kao SY, Calman AF, Luciw PA, Peterlin BM (1987) Anti-termination of transcription within the long terminal repeat of HIV-1 by tat gene product. Nature 330: 489-493.
    • (1987) Nature , vol.330 , pp. 489-493
    • Kao, S.Y.1    Calman, A.F.2    Luciw, P.A.3    Peterlin, B.M.4
  • 3
    • 38149020517 scopus 로고    scopus 로고
    • Transcription-dependent gene looping of the HIV-1 provirus is dictated by recognition of premRNA processing signals
    • Perkins KJ, Lusic M, Mitar I, Giacca M, Proudfoot NJ (2008) Transcription-dependent gene looping of the HIV-1 provirus is dictated by recognition of premRNA processing signals. Mol Cell 29: 56-68.
    • (2008) Mol Cell , vol.29 , pp. 56-68
    • Perkins, K.J.1    Lusic, M.2    Mitar, I.3    Giacca, M.4    Proudfoot, N.J.5
  • 4
    • 0032548918 scopus 로고    scopus 로고
    • A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA
    • Wei P, Garber ME, Fang SM, Fischer WH, Jones KA (1998) A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA. Cell 92: 451-462.
    • (1998) Cell , vol.92 , pp. 451-462
    • Wei, P.1    Garber, M.E.2    Fang, S.M.3    Fischer, W.H.4    Jones, K.A.5
  • 5
    • 0032544559 scopus 로고    scopus 로고
    • Activation of integrated provirus requires histone acetyltransferase. p300 and P/CAF are coactivators for HIV-1 Tat
    • Benkirane M, Chun RF, Xiao H, Ogryzko VV, Howard BH, et al. (1998) Activation of integrated provirus requires histone acetyltransferase. p300 and P/CAF are coactivators for HIV-1 Tat. J Biol Chem 273: 24898-24905.
    • (1998) J Biol Chem , vol.273 , pp. 24898-24905
    • Benkirane, M.1    Chun, R.F.2    Xiao, H.3    Ogryzko, V.V.4    Howard, B.H.5
  • 6
    • 27944487541 scopus 로고    scopus 로고
    • Tat gets the "green" light on transcription initiation
    • Brady J, Kashanchi F (2005) Tat gets the "green" light on transcription initiation. Retrovirology 2: 69.
    • (2005) Retrovirology , vol.2 , pp. 69
    • Brady, J.1    Kashanchi, F.2
  • 7
    • 34249810678 scopus 로고    scopus 로고
    • Sustained induction of NF-kappa B is required for efficient expression of latent human immunodeficiency virus type 1
    • Williams SA, Kwon H, Chen LF, Greene WC (2007) Sustained induction of NF-kappa B is required for efficient expression of latent human immunodeficiency virus type 1. J Virol 81: 6043-6056.
    • (2007) J Virol , vol.81 , pp. 6043-6056
    • Williams, S.A.1    Kwon, H.2    Chen, L.F.3    Greene, W.C.4
  • 8
    • 34249802347 scopus 로고    scopus 로고
    • Chromatin-associated regulation of HIV-1 transcription: Implications for the development of therapeutic strategies
    • Quivy V, De Walque S, Van Lint C (2007) Chromatin-associated regulation of HIV-1 transcription: implications for the development of therapeutic strategies. Subcell Biochem 41: 371-396.
    • (2007) Subcell Biochem , vol.41 , pp. 371-396
    • Quivy, V.1    De Walque, S.2    Van Lint, C.3
  • 9
    • 52449107549 scopus 로고    scopus 로고
    • Factors controlling chromatin organization and nucleosome positioning for establishment and maintenance of HIV latency
    • Sadowski I, Lourenco P, Malcolm T (2008) Factors controlling chromatin organization and nucleosome positioning for establishment and maintenance of HIV latency. Curr HIV Res 6: 286-295.
    • (2008) Curr HIV Res , vol.6 , pp. 286-295
    • Sadowski, I.1    Lourenco, P.2    Malcolm, T.3
  • 10
    • 0347624643 scopus 로고    scopus 로고
    • Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter
    • Lusic M, Marcello A, Cereseto A, Giacca M (2003) Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter. EMBO J 22: 6550-6561.
    • (2003) EMBO J , vol.22 , pp. 6550-6561
    • Lusic, M.1    Marcello, A.2    Cereseto, A.3    Giacca, M.4
  • 11
    • 0027258123 scopus 로고
    • Chromatin disruption in the promoter of human immunodeficiency virus type 1 during transcriptional activation
    • Verdin E, Paras P Jr, Van Lint C (1993) Chromatin disruption in the promoter of human immunodeficiency virus type 1 during transcriptional activation. EMBO J 12: 3249-3259.
    • (1993) EMBO J , vol.12 , pp. 3249-3259
    • Verdin, E.1    Paras Jr, P.2    Van Lint, C.3
  • 12
    • 33748159867 scopus 로고    scopus 로고
    • Effect of SWI/SNF chromatin remodeling complex on HIV-1 Tat activated transcription
    • Agbottah E, Deng L, Dannenberg LO, Pumfery A, Kashanchi F (2006) Effect of SWI/SNF chromatin remodeling complex on HIV-1 Tat activated transcription. Retrovirology 3: 48.
    • (2006) Retrovirology , vol.3 , pp. 48
    • Agbottah, E.1    Deng, L.2    Dannenberg, L.O.3    Pumfery, A.4    Kashanchi, F.5
  • 13
    • 33746021681 scopus 로고    scopus 로고
    • The SWI/SNF chromatin-remodeling complex is a cofactor for Tat transactivation of the HIV promoter
    • Mahmoudi T, Parra M, Vries RG, Kauder SE, Verrijzer CP, et al. (2006) The SWI/SNF chromatin-remodeling complex is a cofactor for Tat transactivation of the HIV promoter. J Biol Chem 281: 19960-19968.
    • (2006) J Biol Chem , vol.281 , pp. 19960-19968
    • Mahmoudi, T.1    Parra, M.2    Vries, R.G.3    Kauder, S.E.4    Verrijzer, C.P.5
  • 14
    • 33646130853 scopus 로고    scopus 로고
    • Requirement for SWI/SNF chromatin-remodeling complex in Tat-mediated activation of the HIV-1 promoter
    • Treand C, du Chene I, Bres V, Kiernan R, Benarous R, et al. (2006) Requirement for SWI/SNF chromatin-remodeling complex in Tat-mediated activation of the HIV-1 promoter. EMBO J 25: 1690-1699.
    • (2006) EMBO J , vol.25 , pp. 1690-1699
    • Treand, C.1    du Chene, I.2    Bres, V.3    Kiernan, R.4    Benarous, R.5
  • 15
    • 40749121256 scopus 로고    scopus 로고
    • The histone chaperone protein Nucleosome Assembly Protein-1 (hNAP-1) binds HIV-1 Tat and promotes viral transcription
    • Vardabasso C, Manganaro L, Lusic M, Marcello A, Giacca M (2008) The histone chaperone protein Nucleosome Assembly Protein-1 (hNAP-1) binds HIV-1 Tat and promotes viral transcription. Retrovirology 5: 8.
    • (2008) Retrovirology , vol.5 , pp. 8
    • Vardabasso, C.1    Manganaro, L.2    Lusic, M.3    Marcello, A.4    Giacca, M.5
  • 16
    • 40749092840 scopus 로고    scopus 로고
    • The receptor tyrosine kinase RON represses HIV-1 transcription by targeting RNA polymerase II processivity
    • Klatt A, Zhang Z, Kalantari P, Hankey PA, Gilmour DS, et al. (2008) The receptor tyrosine kinase RON represses HIV-1 transcription by targeting RNA polymerase II processivity. J Immunol 180: 1670-1677.
    • (2008) J Immunol , vol.180 , pp. 1670-1677
    • Klatt, A.1    Zhang, Z.2    Kalantari, P.3    Hankey, P.A.4    Gilmour, D.S.5
  • 17
    • 34547938116 scopus 로고    scopus 로고
    • The 73 kDa subunit of the CPSF complex binds to the HIV-1 LTR promoter and functions as a negative regulatory factor that is inhibited by the HIV-1 Tat protein
    • de la Vega L, Sanchez-Duffhues G, Fresno M, Schmitz ML, Munoz E, et al. (2007) The 73 kDa subunit of the CPSF complex binds to the HIV-1 LTR promoter and functions as a negative regulatory factor that is inhibited by the HIV-1 Tat protein. J Mol Biol 372: 317-330.
    • (2007) J Mol Biol , vol.372 , pp. 317-330
    • de la Vega, L.1    Sanchez-Duffhues, G.2    Fresno, M.3    Schmitz, M.L.4    Munoz, E.5
  • 18
    • 0029919356 scopus 로고    scopus 로고
    • Transcriptional activation and chromatin remodeling of the HIV-1 promoter in response to histone acetylation
    • Van Lint C, Emiliani S, Ott M, Verdin E (1996) Transcriptional activation and chromatin remodeling of the HIV-1 promoter in response to histone acetylation. EMBO J 15: 1112-1120.
    • (1996) EMBO J , vol.15 , pp. 1112-1120
    • Van Lint, C.1    Emiliani, S.2    Ott, M.3    Verdin, E.4
  • 19
    • 37149031062 scopus 로고    scopus 로고
    • CBF-1 promotes transcriptional silencing during the establishment of HIV-1 latency
    • Tyagi M, Karn J (2007) CBF-1 promotes transcriptional silencing during the establishment of HIV-1 latency. EMBO J 26: 4985-4995.
    • (2007) EMBO J , vol.26 , pp. 4985-4995
    • Tyagi, M.1    Karn, J.2
  • 20
    • 33846506800 scopus 로고    scopus 로고
    • Suv39H1 and HP1gamma are responsible for chromatin-mediated HIV-1 transcriptional silencing and post-integration latency
    • du Chene I, Basyuk E, Lin YL, Triboulet R, Knezevich A, et al. (2007) Suv39H1 and HP1gamma are responsible for chromatin-mediated HIV-1 transcriptional silencing and post-integration latency. EMBO J 26: 424-435.
    • (2007) EMBO J , vol.26 , pp. 424-435
    • du Chene, I.1    Basyuk, E.2    Lin, Y.L.3    Triboulet, R.4    Knezevich, A.5
  • 21
    • 0035794637 scopus 로고    scopus 로고
    • The site of HIV-1 integration in the human genome determines basal transcriptional activity and response to Tat transactivation
    • Jordan A, Defechereux P, Verdin E (2001) The site of HIV-1 integration in the human genome determines basal transcriptional activity and response to Tat transactivation. EMBO J 20: 1726-1738.
    • (2001) EMBO J , vol.20 , pp. 1726-1738
    • Jordan, A.1    Defechereux, P.2    Verdin, E.3
  • 22
    • 23844480660 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 Vpr-dependent cell cycle arrest through a mitogen-activated protein kinase signal transduction pathway
    • Yoshizuka N, Yoshizuka-Chadani Y, Krishnan V, Zeichner SL (2005) Human immunodeficiency virus type 1 Vpr-dependent cell cycle arrest through a mitogen-activated protein kinase signal transduction pathway. J Virol 79: 11366-11381.
    • (2005) J Virol , vol.79 , pp. 11366-11381
    • Yoshizuka, N.1    Yoshizuka-Chadani, Y.2    Krishnan, V.3    Zeichner, S.L.4
  • 23
    • 0034682076 scopus 로고    scopus 로고
    • Inactivation of the SNF5 transcription factor gene abolishes the lethal phenotype induced by the expression of HIV-1 integrase in yeast
    • Parissi V, Caumont A, Richard de Soultrait V, Dupont CH, Pichuantes S, et al. (2000) Inactivation of the SNF5 transcription factor gene abolishes the lethal phenotype induced by the expression of HIV-1 integrase in yeast. Gene 247: 129-136.
    • (2000) Gene , vol.247 , pp. 129-136
    • Parissi, V.1    Caumont, A.2    Richard de Soultrait, V.3    Dupont, C.H.4    Pichuantes, S.5
  • 25
    • 0032561356 scopus 로고    scopus 로고
    • Identification of limiting steps for efficient trans-activation of HIV-1 promoter by Tat in Saccharomyces cerevisiae
    • Daviet L, Bois F, Battisti PL, Gatignol A (1998) Identification of limiting steps for efficient trans-activation of HIV-1 promoter by Tat in Saccharomyces cerevisiae. J Biol Chem 273: 28219-28228.
    • (1998) J Biol Chem , vol.273 , pp. 28219-28228
    • Daviet, L.1    Bois, F.2    Battisti, P.L.3    Gatignol, A.4
  • 26
    • 0036122489 scopus 로고    scopus 로고
    • Differential effects of chromatin and Gcn4 on the 50-fold range of expression among individual yeast Ty1 retrotransposons
    • Morillon A, Benard L, Springer M, Lesage P (2002) Differential effects of chromatin and Gcn4 on the 50-fold range of expression among individual yeast Ty1 retrotransposons. Mol Cell Biol 22: 2078-2088.
    • (2002) Mol Cell Biol , vol.22 , pp. 2078-2088
    • Morillon, A.1    Benard, L.2    Springer, M.3    Lesage, P.4
  • 27
    • 14444275279 scopus 로고    scopus 로고
    • DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs
    • Wada T, Takagi T, Yamaguchi Y, Ferdous A, Imai T, et al. (1998) DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs. Genes Dev 12: 343-356.
    • (1998) Genes Dev , vol.12 , pp. 343-356
    • Wada, T.1    Takagi, T.2    Yamaguchi, Y.3    Ferdous, A.4    Imai, T.5
  • 28
    • 23844536533 scopus 로고    scopus 로고
    • Severe adenine starvation activates Ty1 transcription and retrotransposition in Saccharomyces cerevisiae
    • Todeschini AL, Morillon A, Springer M, Lesage P (2005) Severe adenine starvation activates Ty1 transcription and retrotransposition in Saccharomyces cerevisiae. Mol Cell Biol 25: 7459-7472.
    • (2005) Mol Cell Biol , vol.25 , pp. 7459-7472
    • Todeschini, A.L.1    Morillon, A.2    Springer, M.3    Lesage, P.4
  • 29
    • 0031439267 scopus 로고    scopus 로고
    • The yeast HPR1 gene has a functional role in transcriptional elongation that uncovers a novel source of genome instability
    • Chavez S, Aguilera A (1997) The yeast HPR1 gene has a functional role in transcriptional elongation that uncovers a novel source of genome instability. Genes Dev 11: 3459-3470.
    • (1997) Genes Dev , vol.11 , pp. 3459-3470
    • Chavez, S.1    Aguilera, A.2
  • 30
    • 0035281586 scopus 로고    scopus 로고
    • In vivo chromatin remodeling by yeast ISWI homologs Isw1p and Isw2p
    • Kent NA, Karabetsou N, Politis PK, Mellor J (2001) In vivo chromatin remodeling by yeast ISWI homologs Isw1p and Isw2p. Genes Dev 15: 619-626.
    • (2001) Genes Dev , vol.15 , pp. 619-626
    • Kent, N.A.1    Karabetsou, N.2    Politis, P.K.3    Mellor, J.4
  • 31
    • 0345016384 scopus 로고    scopus 로고
    • Isw1 chromatin remodeling ATPase coordinates transcription elongation and termination by RNA polymerase II
    • Morillon A, Karabetsou N, O'Sullivan J, Kent N, Proudfoot N, et al. (2003) Isw1 chromatin remodeling ATPase coordinates transcription elongation and termination by RNA polymerase II. Cell 115: 425-435.
    • (2003) Cell , vol.115 , pp. 425-435
    • Morillon, A.1    Karabetsou, N.2    O'Sullivan, J.3    Kent, N.4    Proudfoot, N.5
  • 32
    • 31544446038 scopus 로고    scopus 로고
    • Transcriptional activators are dispensable for transcription in the absence of Spt6-mediated chromatin reassembly of promoter regions
    • Adkins MW, Tyler JK (2006) Transcriptional activators are dispensable for transcription in the absence of Spt6-mediated chromatin reassembly of promoter regions. Mol Cell 21: 405-416.
    • (2006) Mol Cell , vol.21 , pp. 405-416
    • Adkins, M.W.1    Tyler, J.K.2
  • 33
    • 33846525436 scopus 로고    scopus 로고
    • The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export
    • Yoh SM, Cho H, Pickle L, Evans RM, Jones KA (2007) The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export. Genes Dev 21: 160-174.
    • (2007) Genes Dev , vol.21 , pp. 160-174
    • Yoh, S.M.1    Cho, H.2    Pickle, L.3    Evans, R.M.4    Jones, K.A.5
  • 34
    • 33644942386 scopus 로고    scopus 로고
    • A simple in vivo assay for measuring the efficiency of gene length-dependent processes in yeast mRNA biogenesis
    • Morillo-Huesca M, Vanti M, Chavez S (2006) A simple in vivo assay for measuring the efficiency of gene length-dependent processes in yeast mRNA biogenesis. FEBS J 273: 756-769.
    • (2006) FEBS J , vol.273 , pp. 756-769
    • Morillo-Huesca, M.1    Vanti, M.2    Chavez, S.3
  • 35
    • 34047262671 scopus 로고    scopus 로고
    • Transcriptional regulation by chromatin disassembly and reassembly
    • Williams SK, Tyler JK (2007) Transcriptional regulation by chromatin disassembly and reassembly. Curr Opin Genet Dev 17: 88-93.
    • (2007) Curr Opin Genet Dev , vol.17 , pp. 88-93
    • Williams, S.K.1    Tyler, J.K.2
  • 36
    • 34548737128 scopus 로고    scopus 로고
    • Chd1 and yFACT act in opposition in regulating transcription
    • Biswas D, Dutta-Biswas R, Stillman DJ (2007) Chd1 and yFACT act in opposition in regulating transcription. Mol Cell Biol 27: 6279-6287.
    • (2007) Mol Cell Biol , vol.27 , pp. 6279-6287
    • Biswas, D.1    Dutta-Biswas, R.2    Stillman, D.J.3
  • 37
    • 0037313160 scopus 로고    scopus 로고
    • Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins
    • Lindstrom DL, Squazzo SL, Muster N, Burckin TA, Wachter KC, et al. (2003) Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins. Mol Cell Biol 23: 1368-1378.
    • (2003) Mol Cell Biol , vol.23 , pp. 1368-1378
    • Lindstrom, D.L.1    Squazzo, S.L.2    Muster, N.3    Burckin, T.A.4    Wachter, K.C.5
  • 38
    • 0036787862 scopus 로고    scopus 로고
    • RNA polymerase II elongation factors of Saccharomyces cerevisiae: A targeted proteomics approach
    • Krogan NJ, Kim M, Ahn SH, Zhong G, Kobor MS, et al. (2002) RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach. Mol Cell Biol 22: 6979-6992.
    • (2002) Mol Cell Biol , vol.22 , pp. 6979-6992
    • Krogan, N.J.1    Kim, M.2    Ahn, S.H.3    Zhong, G.4    Kobor, M.S.5
  • 39
    • 0034667805 scopus 로고    scopus 로고
    • Spt5 and spt6 are associated with active transcription and have characteristics of general elongation factors in D. melanogaster
    • Kaplan CD, Morris JR, Wu C, Winston F (2000) Spt5 and spt6 are associated with active transcription and have characteristics of general elongation factors in D. melanogaster. Genes Dev 14: 2623-2634.
    • (2000) Genes Dev , vol.14 , pp. 2623-2634
    • Kaplan, C.D.1    Morris, J.R.2    Wu, C.3    Winston, F.4
  • 40
    • 0042830962 scopus 로고    scopus 로고
    • Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo
    • Saunders A, Werner J, Andrulis ED, Nakayama T, Hirose S, et al. (2003) Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo. Science 301: 1094-1096.
    • (2003) Science , vol.301 , pp. 1094-1096
    • Saunders, A.1    Werner, J.2    Andrulis, E.D.3    Nakayama, T.4    Hirose, S.5
  • 41
    • 0345698603 scopus 로고    scopus 로고
    • Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes
    • Simic R, Lindstrom DL, Tran HG, Roinick KL, Costa PJ, et al. (2003) Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes. EMBO J 22: 1846-1856.
    • (2003) EMBO J , vol.22 , pp. 1846-1856
    • Simic, R.1    Lindstrom, D.L.2    Tran, H.G.3    Roinick, K.L.4    Costa, P.J.5
  • 42
    • 0037446948 scopus 로고    scopus 로고
    • HIV reproducibly establishes a latent infection after acute infection of T cells in vitro
    • Jordan A, Bisgrove D, Verdin E (2003) HIV reproducibly establishes a latent infection after acute infection of T cells in vitro. EMBO J 22: 1868-1877.
    • (2003) EMBO J , vol.22 , pp. 1868-1877
    • Jordan, A.1    Bisgrove, D.2    Verdin, E.3
  • 43
    • 0033929108 scopus 로고    scopus 로고
    • The human factors YY1 and LSF repress the human immunodeficiency virus type 1 long terminal repeat via recruitment of histone deacetylase 1
    • Coull JJ, Romerio F, Sun JM, Volker JL, Galvin KM, et al. (2000) The human factors YY1 and LSF repress the human immunodeficiency virus type 1 long terminal repeat via recruitment of histone deacetylase 1. J Virol 74: 6790-6799.
    • (2000) J Virol , vol.74 , pp. 6790-6799
    • Coull, J.J.1    Romerio, F.2    Sun, J.M.3    Volker, J.L.4    Galvin, K.M.5
  • 44
    • 0036232430 scopus 로고    scopus 로고
    • Counterregulation of chromatin deacetylation and histone deacetylase occupancy at the integrated promoter of human immunodeficiency virus type 1 (HIV-1) by the HIV-1 repressor YY1 and HIV-1 activator Tat
    • He G, Margolis DM (2002) Counterregulation of chromatin deacetylation and histone deacetylase occupancy at the integrated promoter of human immunodeficiency virus type 1 (HIV-1) by the HIV-1 repressor YY1 and HIV-1 activator Tat. Mol Cell Biol 22: 2965-2973.
    • (2002) Mol Cell Biol , vol.22 , pp. 2965-2973
    • He, G.1    Margolis, D.M.2
  • 45
    • 0028949263 scopus 로고
    • Delineating minimal protein domains and promoter elements for transcriptional activation by lentivirus Tat proteins
    • Southgate CD, Green MR (1995) Delineating minimal protein domains and promoter elements for transcriptional activation by lentivirus Tat proteins. J Virol 69: 2605-2610.
    • (1995) J Virol , vol.69 , pp. 2605-2610
    • Southgate, C.D.1    Green, M.R.2
  • 46
    • 44349116852 scopus 로고    scopus 로고
    • The transition from transcriptional initiation to elongation
    • Wade JT, Struhl K (2008) The transition from transcriptional initiation to elongation. Curr Opin Genet Dev 18: 130-136.
    • (2008) Curr Opin Genet Dev , vol.18 , pp. 130-136
    • Wade, J.T.1    Struhl, K.2
  • 48
    • 0023874231 scopus 로고
    • Mutational analysis of the trans-activation-responsive region of the human immunodeficiency virus type I long terminal repeat
    • Hauber J, Cullen BR (1988) Mutational analysis of the trans-activation-responsive region of the human immunodeficiency virus type I long terminal repeat. J Virol 62: 673-679.
    • (1988) J Virol , vol.62 , pp. 673-679
    • Hauber, J.1    Cullen, B.R.2
  • 49
    • 0024651195 scopus 로고
    • Structure, sequence, and position of the stem-loop in tar determine transcriptional elongation by tat through the HIV-1 long terminal repeat
    • Selby MJ, Bain ES, Luciw PA, Peterlin BM (1989) Structure, sequence, and position of the stem-loop in tar determine transcriptional elongation by tat through the HIV-1 long terminal repeat. Genes Dev 3: 547-558.
    • (1989) Genes Dev , vol.3 , pp. 547-558
    • Selby, M.J.1    Bain, E.S.2    Luciw, P.A.3    Peterlin, B.M.4
  • 50
    • 0343867155 scopus 로고    scopus 로고
    • The hormone responsive region of mouse mammary tumor virus positions a nucleosome and precludes access of nuclear factor I to the promoter
    • Candau R, Chavez S, Beato M (1996) The hormone responsive region of mouse mammary tumor virus positions a nucleosome and precludes access of nuclear factor I to the promoter. J Steroid Biochem Mol Biol 57: 19-31.
    • (1996) J Steroid Biochem Mol Biol , vol.57 , pp. 19-31
    • Candau, R.1    Chavez, S.2    Beato, M.3
  • 51
    • 0026093989 scopus 로고
    • Detailed mutational analysis of TAR RNA: Critical spacing between the bulge and loop recognition domains
    • Berkhout B, Jeang KT (1991) Detailed mutational analysis of TAR RNA: critical spacing between the bulge and loop recognition domains. Nucleic Acids Res 19: 6169-6176.
    • (1991) Nucleic Acids Res , vol.19 , pp. 6169-6176
    • Berkhout, B.1    Jeang, K.T.2
  • 52
    • 0028338847 scopus 로고
    • Comparison of 5′ and 3′ long terminal repeat promoter function in human immunodeficiency virus
    • Klaver B, Berkhout B (1994) Comparison of 5′ and 3′ long terminal repeat promoter function in human immunodeficiency virus. J Virol 68: 3830-3840.
    • (1994) J Virol , vol.68 , pp. 3830-3840
    • Klaver, B.1    Berkhout, B.2
  • 53
    • 0034667949 scopus 로고    scopus 로고
    • High-resolution localization of Drosophila Spt5 and Spt6 at heat shock genes in vivo: Roles in promoter proximal pausing and transcription elongation
    • Andrulis ED, Guzman E, Doring P, Werner J, Lis JT (2000) High-resolution localization of Drosophila Spt5 and Spt6 at heat shock genes in vivo: roles in promoter proximal pausing and transcription elongation. Genes Dev 14: 2635-2649.
    • (2000) Genes Dev , vol.14 , pp. 2635-2649
    • Andrulis, E.D.1    Guzman, E.2    Doring, P.3    Werner, J.4    Lis, J.T.5
  • 54
    • 0242579933 scopus 로고    scopus 로고
    • The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo
    • Mason PB, Struhl K (2003) The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo. Mol Cell Biol 23: 8323-8333.
    • (2003) Mol Cell Biol , vol.23 , pp. 8323-8333
    • Mason, P.B.1    Struhl, K.2
  • 55
    • 33845216389 scopus 로고    scopus 로고
    • Gene-specific requirement for FACT during transcription is related to the chromatin organization of the transcribed region
    • Jimeno-Gonzalez S, Gomez-Herreros F, Alepuz PM, Chavez S (2006) Gene-specific requirement for FACT during transcription is related to the chromatin organization of the transcribed region. Mol Cell Biol 26: 8710-8721.
    • (2006) Mol Cell Biol , vol.26 , pp. 8710-8721
    • Jimeno-Gonzalez, S.1    Gomez-Herreros, F.2    Alepuz, P.M.3    Chavez, S.4
  • 56
    • 46449112319 scopus 로고    scopus 로고
    • A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome
    • Mavrich TN, Ioshikhes IP, Venters BJ, Jiang C, Tomsho LP, et al. (2008) A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome. Genome Res 18: 1073-1083.
    • (2008) Genome Res , vol.18 , pp. 1073-1083
    • Mavrich, T.N.1    Ioshikhes, I.P.2    Venters, B.J.3    Jiang, C.4    Tomsho, L.P.5
  • 57
    • 0029953664 scopus 로고    scopus 로고
    • cis-acting sequences located downstream of the human immunodeficiency virus type 1 promoter affect its chromatin structure and transcriptional activity
    • el Kharroubi A, Martin MA (1996) cis-acting sequences located downstream of the human immunodeficiency virus type 1 promoter affect its chromatin structure and transcriptional activity. Mol Cell Biol 16: 2958-2966.
    • (1996) Mol Cell Biol , vol.16 , pp. 2958-2966
    • el Kharroubi, A.1    Martin, M.A.2
  • 58
    • 0029759928 scopus 로고    scopus 로고
    • Activator-dependent regulation of transcriptional pausing on nucleosomal templates
    • Brown SA, Imbalzano AN, Kingston RE (1996) Activator-dependent regulation of transcriptional pausing on nucleosomal templates. Genes Dev 10: 1479-1490.
    • (1996) Genes Dev , vol.10 , pp. 1479-1490
    • Brown, S.A.1    Imbalzano, A.N.2    Kingston, R.E.3
  • 59
    • 46149108345 scopus 로고    scopus 로고
    • Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci
    • Petesch SJ, Lis JT (2008) Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci. Cell 134: 74-84.
    • (2008) Cell , vol.134 , pp. 74-84
    • Petesch, S.J.1    Lis, J.T.2
  • 60
    • 0041828953 scopus 로고    scopus 로고
    • Transcription elongation factors repress transcription initiation from cryptic sites
    • Kaplan CD, Laprade L, Winston F (2003) Transcription elongation factors repress transcription initiation from cryptic sites. Science 301: 1096-1099.
    • (2003) Science , vol.301 , pp. 1096-1099
    • Kaplan, C.D.1    Laprade, L.2    Winston, F.3
  • 61
    • 21044451712 scopus 로고    scopus 로고
    • Genome-wide analysis of chromosomal features repressing human immunodeficiency virus transcription
    • Lewinski MK, Bisgrove D, Shinn P, Chen H, Hoffmann C, et al. (2005) Genome-wide analysis of chromosomal features repressing human immunodeficiency virus transcription. J Virol 79: 6610-6619.
    • (2005) J Virol , vol.79 , pp. 6610-6619
    • Lewinski, M.K.1    Bisgrove, D.2    Shinn, P.3    Chen, H.4    Hoffmann, C.5
  • 63
    • 0032029996 scopus 로고    scopus 로고
    • Transcriptional interference perturbs the binding of Sp1 to the HIV-1 promoter
    • Greger IH, Demarchi F, Giacca M, Proudfoot NJ (1998) Transcriptional interference perturbs the binding of Sp1 to the HIV-1 promoter. Nucleic Acids Res 26: 1294-1301.
    • (1998) Nucleic Acids Res , vol.26 , pp. 1294-1301
    • Greger, I.H.1    Demarchi, F.2    Giacca, M.3    Proudfoot, N.J.4
  • 64
    • 48649085472 scopus 로고    scopus 로고
    • Orientation-dependent regulation of integrated HIV-1 expression by host gene transcriptional readthrough
    • Han Y, Lin YB, An W, Xu J, Yang HC, et al. (2008) Orientation-dependent regulation of integrated HIV-1 expression by host gene transcriptional readthrough. Cell Host Microbe 4: 134-146.
    • (2008) Cell Host Microbe , vol.4 , pp. 134-146
    • Han, Y.1    Lin, Y.B.2    An, W.3    Xu, J.4    Yang, H.C.5
  • 65
    • 48649089113 scopus 로고    scopus 로고
    • Transcriptional interference antagonizes proviral gene expression to promote HIV latency
    • Lenasi T, Contreras X, Peterlin BM (2008) Transcriptional interference antagonizes proviral gene expression to promote HIV latency. Cell Host Microbe 4: 123-133.
    • (2008) Cell Host Microbe , vol.4 , pp. 123-133
    • Lenasi, T.1    Contreras, X.2    Peterlin, B.M.3
  • 66
    • 0032579440 scopus 로고    scopus 로고
    • Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR-mediated gene disruption and other applications
    • Brachmann CB, Davies A, Cost GJ, Caputo E, Li J, et al. (1998) Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14: 115-132.
    • (1998) Yeast , vol.14 , pp. 115-132
    • Brachmann, C.B.1    Davies, A.2    Cost, G.J.3    Caputo, E.4    Li, J.5
  • 68
    • 0024500464 scopus 로고
    • Upstream activation sequence-dependent alteration of chromatin structure and transcription activation of the yeast GAL1-GAL10 genes
    • Fedor MJ, Kornberg RD (1989) Upstream activation sequence-dependent alteration of chromatin structure and transcription activation of the yeast GAL1-GAL10 genes. Mol Cell Biol 9: 1721-1732.
    • (1989) Mol Cell Biol , vol.9 , pp. 1721-1732
    • Fedor, M.J.1    Kornberg, R.D.2
  • 69
    • 0028793532 scopus 로고
    • Constitutive repression and nuclear factor I-dependent hormone activation of the mouse mammary tumor virus promoter in Saccharomyces cerevisiae
    • Chavez S, Candau R, Truss M, Beato M (1995) Constitutive repression and nuclear factor I-dependent hormone activation of the mouse mammary tumor virus promoter in Saccharomyces cerevisiae. Mol Cell Biol 15: 6987-6998.
    • (1995) Mol Cell Biol , vol.15 , pp. 6987-6998
    • Chavez, S.1    Candau, R.2    Truss, M.3    Beato, M.4


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