-
1
-
-
36249017836
-
On macromolecular refinement at subatomic resolution with interatomic scatterers
-
Afonine P.V., Grosse-Kunstleve R.W., Adams P.D., Lunin V.Y., and Urzhumtsev A. On macromolecular refinement at subatomic resolution with interatomic scatterers. Acta Crystallogr. D Biol. Crystallogr. 63 (2007) 1194-1197
-
(2007)
Acta Crystallogr. D Biol. Crystallogr.
, vol.63
, pp. 1194-1197
-
-
Afonine, P.V.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Lunin, V.Y.4
Urzhumtsev, A.5
-
3
-
-
0029827130
-
Identification of LIM3 as the principal determinant of paxillin focal adhesion localization and characterization of a novel motif on paxillin directing vinculin and focal adhesion kinase binding
-
Brown M.C., Perrotta J.A., and Turner C.E. Identification of LIM3 as the principal determinant of paxillin focal adhesion localization and characterization of a novel motif on paxillin directing vinculin and focal adhesion kinase binding. J. Cell Biol. 135 (1996) 1109-1123
-
(1996)
J. Cell Biol.
, vol.135
, pp. 1109-1123
-
-
Brown, M.C.1
Perrotta, J.A.2
Turner, C.E.3
-
4
-
-
4644328892
-
Paxillin: adapting to change
-
Brown M.C., and Turner C.E. Paxillin: adapting to change. Physiol. Rev. 84 (2004) 1315-1339
-
(2004)
Physiol. Rev.
, vol.84
, pp. 1315-1339
-
-
Brown, M.C.1
Turner, C.E.2
-
5
-
-
0033696968
-
Solution structure of the interacting domains of the Mad-Sin3 complex: implications for recruitment of a chromatin-modifying complex
-
Brubaker K., Cowley S.M., Huang K., Loo L., Yochum G.S., Ayer D.E., Eisenman R.N., and Radhakrishnan I. Solution structure of the interacting domains of the Mad-Sin3 complex: implications for recruitment of a chromatin-modifying complex. Cell 103 (2000) 655-665
-
(2000)
Cell
, vol.103
, pp. 655-665
-
-
Brubaker, K.1
Cowley, S.M.2
Huang, K.3
Loo, L.4
Yochum, G.S.5
Ayer, D.E.6
Eisenman, R.N.7
Radhakrishnan, I.8
-
6
-
-
0029400480
-
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
-
Delaglio F., Grzesiek S., Vuister G.W., Zhu G., Pfeifer J., and Bax A. NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6 (1995) 277-293
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
8
-
-
3242886771
-
PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations
-
Dolinsky T.J., Nielsen J.E., McCammon J.A., and Baker N.A. PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations. Nucleic Acids Res. 32 (2004) W665-W667
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Dolinsky, T.J.1
Nielsen, J.E.2
McCammon, J.A.3
Baker, N.A.4
-
10
-
-
0037417416
-
CH-ILKBP regulates cell survival by facilitating the membrane translocation of protein kinase B/Akt
-
Fukuda T., Guo L., Shi X., and Wu C. CH-ILKBP regulates cell survival by facilitating the membrane translocation of protein kinase B/Akt. J. Cell Biol. 160 (2003) 1001-1008
-
(2003)
J. Cell Biol.
, vol.160
, pp. 1001-1008
-
-
Fukuda, T.1
Guo, L.2
Shi, X.3
Wu, C.4
-
11
-
-
1542289014
-
NMR solution structure of the focal adhesion targeting domain of focal adhesion kinase in complex with a paxillin LD peptide: evidence for a two-site binding model
-
Gao G., Prutzman K.C., King M.L., Scheswohl D.M., DeRose E.F., London R.E., Schaller M.D., and Campbell S.L. NMR solution structure of the focal adhesion targeting domain of focal adhesion kinase in complex with a paxillin LD peptide: evidence for a two-site binding model. J. Biol. Chem. 279 (2004) 8441-8451
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 8441-8451
-
-
Gao, G.1
Prutzman, K.C.2
King, M.L.3
Scheswohl, D.M.4
DeRose, E.F.5
London, R.E.6
Schaller, M.D.7
Campbell, S.L.8
-
12
-
-
37549055113
-
Structural basis for the interaction between focal adhesion kinase and CD4
-
Garron M.L., Arthos J., Guichou J.F., McNally J., Cicala C., and Arold S.T. Structural basis for the interaction between focal adhesion kinase and CD4. J. Mol. Biol. 375 (2008) 1320-1328
-
(2008)
J. Mol. Biol.
, vol.375
, pp. 1320-1328
-
-
Garron, M.L.1
Arthos, J.2
Guichou, J.F.3
McNally, J.4
Cicala, C.5
Arold, S.T.6
-
14
-
-
33750480828
-
Molecular basis of AKAP specificity for PKA regulatory subunits
-
Gold M.G., Lygren B., Dokurno P., Hoshi N., McConnachie G., Tasken K., Carlson C.R., Scott J.D., and Barford D. Molecular basis of AKAP specificity for PKA regulatory subunits. Mol. Cell 24 (2006) 383-395
-
(2006)
Mol. Cell
, vol.24
, pp. 383-395
-
-
Gold, M.G.1
Lygren, B.2
Dokurno, P.3
Hoshi, N.4
McConnachie, G.5
Tasken, K.6
Carlson, C.R.7
Scott, J.D.8
Barford, D.9
-
15
-
-
0035937140
-
Interaction of paxillin with p21-activated Kinase (PAK). Association of paxillin alpha with the kinase-inactive and the Cdc42-activated forms of PAK3
-
Hashimoto S., Tsubouchi A., Mazaki Y., and Sabe H. Interaction of paxillin with p21-activated Kinase (PAK). Association of paxillin alpha with the kinase-inactive and the Cdc42-activated forms of PAK3. J. Biol. Chem. 276 (2001) 6037-6045
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 6037-6045
-
-
Hashimoto, S.1
Tsubouchi, A.2
Mazaki, Y.3
Sabe, H.4
-
16
-
-
0141483200
-
Molecular recognition of paxillin LD motifs by the focal adhesion targeting domain
-
Hoellerer M.K., Noble M.E., Labesse G., Campbell I.D., Werner J.M., and Arold S.T. Molecular recognition of paxillin LD motifs by the focal adhesion targeting domain. Structure 11 (2003) 1207-1217
-
(2003)
Structure
, vol.11
, pp. 1207-1217
-
-
Hoellerer, M.K.1
Noble, M.E.2
Labesse, G.3
Campbell, I.D.4
Werner, J.M.5
Arold, S.T.6
-
17
-
-
0034775555
-
Distance mapping of protein-binding sites using spin-labeled oligosaccharide ligands
-
Jain N.U., Venot A., Umemoto K., Leffler H., and Prestegard J.H. Distance mapping of protein-binding sites using spin-labeled oligosaccharide ligands. Protein Sci. 10 (2001) 2393-2400
-
(2001)
Protein Sci.
, vol.10
, pp. 2393-2400
-
-
Jain, N.U.1
Venot, A.2
Umemoto, K.3
Leffler, H.4
Prestegard, J.H.5
-
18
-
-
0033515440
-
The cellulose-binding domains from Cellulomonas fimi beta-1, 4-glucanase CenC bind nitroxide spin-labeled cellooligosaccharides in multiple orientations
-
Johnson P.E., Brun E., MacKenzie L.F., Withers S.G., and McIntosh L.P. The cellulose-binding domains from Cellulomonas fimi beta-1, 4-glucanase CenC bind nitroxide spin-labeled cellooligosaccharides in multiple orientations. J. Mol. Biol. 287 (1999) 609-625
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 609-625
-
-
Johnson, P.E.1
Brun, E.2
MacKenzie, L.F.3
Withers, S.G.4
McIntosh, L.P.5
-
19
-
-
0006925492
-
Pure absorption gradient enhanced heteronuclear single quantum correlation spectroscopy with improved sensitivity
-
Kay L., Keifer P., and Saarinen T. Pure absorption gradient enhanced heteronuclear single quantum correlation spectroscopy with improved sensitivity. J. Am. Chem. Soc. 114 (1992) 10663-10665
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 10663-10665
-
-
Kay, L.1
Keifer, P.2
Saarinen, T.3
-
20
-
-
13444307044
-
Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
-
Krissinel E., and Henrick K. Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr. D Biol. Crystallogr. 60 (2004) 2256-2268
-
(2004)
Acta Crystallogr. D Biol. Crystallogr.
, vol.60
, pp. 2256-2268
-
-
Krissinel, E.1
Henrick, K.2
-
21
-
-
20444400572
-
Actopaxin interacts with TESK1 to regulate cell spreading on fibronectin
-
LaLonde D.P., Brown M.C., Bouverat B.P., and Turner C.E. Actopaxin interacts with TESK1 to regulate cell spreading on fibronectin. J. Biol. Chem. 280 (2005) 21680-21688
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 21680-21688
-
-
LaLonde, D.P.1
Brown, M.C.2
Bouverat, B.P.3
Turner, C.E.4
-
22
-
-
0036197382
-
Structural insight into the mechanisms of targeting and signaling of focal adhesion kinase
-
Liu G., Guibao C.D., and Zheng J. Structural insight into the mechanisms of targeting and signaling of focal adhesion kinase. Mol. Cell. Biol. 22 (2002) 2751-2760
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 2751-2760
-
-
Liu, G.1
Guibao, C.D.2
Zheng, J.3
-
23
-
-
33846426122
-
Solving structures of protein complexes by molecular replacement with Phaser
-
McCoy A.J. Solving structures of protein complexes by molecular replacement with Phaser. Acta Crystallogr. D Biol. Crystallogr. 63 (2007) 32-41
-
(2007)
Acta Crystallogr. D Biol. Crystallogr.
, vol.63
, pp. 32-41
-
-
McCoy, A.J.1
-
25
-
-
0034739856
-
Actopaxin, a new focal adhesion protein that binds paxillin LD motifs and actin and regulates cell adhesion
-
Nikolopoulos S.N., and Turner C.E. Actopaxin, a new focal adhesion protein that binds paxillin LD motifs and actin and regulates cell adhesion. J. Cell Biol. 151 (2000) 1435-1448
-
(2000)
J. Cell Biol.
, vol.151
, pp. 1435-1448
-
-
Nikolopoulos, S.N.1
Turner, C.E.2
-
26
-
-
0035968234
-
Integrin-linked kinase (ILK) binding to paxillin LD1 motif regulates ILK localization to focal adhesions
-
Nikolopoulos S.N., and Turner C.E. Integrin-linked kinase (ILK) binding to paxillin LD1 motif regulates ILK localization to focal adhesions. J. Biol. Chem. 276 (2001) 23499-23505
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 23499-23505
-
-
Nikolopoulos, S.N.1
Turner, C.E.2
-
27
-
-
0035126590
-
Parvin, a 42 kDa focal adhesion protein, related to the alpha-actinin superfamily
-
Olski T.M., Noegel A.A., and Korenbaum E. Parvin, a 42 kDa focal adhesion protein, related to the alpha-actinin superfamily. J. Cell Sci. 114 (2001) 525-538
-
(2001)
J. Cell Sci.
, vol.114
, pp. 525-538
-
-
Olski, T.M.1
Noegel, A.A.2
Korenbaum, E.3
-
28
-
-
39649086685
-
Multiple paxillin binding sites regulate FAK function
-
Scheswohl D.M., Harrell J.R., Rajfur Z., Gao G., Campbell S.L., and Schaller M.D. Multiple paxillin binding sites regulate FAK function. J Mol. Signal. 3 (2008) 1
-
(2008)
J Mol. Signal.
, vol.3
, pp. 1
-
-
Scheswohl, D.M.1
Harrell, J.R.2
Rajfur, Z.3
Gao, G.4
Campbell, S.L.5
Schaller, M.D.6
-
29
-
-
34250656135
-
GIT1 utilizes a focal adhesion targeting-homology domain to bind paxillin
-
Schmalzigaug R., Garron M.L., Roseman J.T., Xing Y., Davidson C.E., Arold S.T., and Premont R.T. GIT1 utilizes a focal adhesion targeting-homology domain to bind paxillin. Cell. Signal. 19 (2007) 1733-1744
-
(2007)
Cell. Signal.
, vol.19
, pp. 1733-1744
-
-
Schmalzigaug, R.1
Garron, M.L.2
Roseman, J.T.3
Xing, Y.4
Davidson, C.E.5
Arold, S.T.6
Premont, R.T.7
-
30
-
-
0032568655
-
SMART, a simple modular architecture research tool: identification of signaling domains
-
Schultz J., Milpetz F., Bork P., and Ponting C.P. SMART, a simple modular architecture research tool: identification of signaling domains. Proc. Natl. Acad. Sci. USA 95 (1998) 5857-5864
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 5857-5864
-
-
Schultz, J.1
Milpetz, F.2
Bork, P.3
Ponting, C.P.4
-
32
-
-
1642483463
-
Interaction of bcl-2 with Paxillin through its BH4 domain is important during ureteric bud branching
-
Sorenson C.M. Interaction of bcl-2 with Paxillin through its BH4 domain is important during ureteric bud branching. J. Biol. Chem. 279 (2004) 11368-11374
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 11368-11374
-
-
Sorenson, C.M.1
-
33
-
-
0033664303
-
The Mad1-Sin3B interaction involves a novel helical fold
-
Spronk C.A., Tessari M., Kaan A.M., Jansen J.F., Vermeulen M., Stunnenberg H.G., and Vuister G.W. The Mad1-Sin3B interaction involves a novel helical fold. Nat. Struct. Biol. 7 (2000) 1100-1104
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 1100-1104
-
-
Spronk, C.A.1
Tessari, M.2
Kaan, A.M.3
Jansen, J.F.4
Vermeulen, M.5
Stunnenberg, H.G.6
Vuister, G.W.7
-
34
-
-
3542998064
-
HBP1 and Mad1 repressors bind the Sin3 corepressor PAH2 domain with opposite helical orientations
-
Swanson K.A., Knoepfler P.S., Huang K., Kang R.S., Cowley S.M., Laherty C.D., Eisenman R.N., and Radhakrishnan I. HBP1 and Mad1 repressors bind the Sin3 corepressor PAH2 domain with opposite helical orientations. Nat. Struct. Mol. Biol. 11 (2004) 738-746
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 738-746
-
-
Swanson, K.A.1
Knoepfler, P.S.2
Huang, K.3
Kang, R.S.4
Cowley, S.M.5
Laherty, C.D.6
Eisenman, R.N.7
Radhakrishnan, I.8
-
35
-
-
0033579448
-
The role of focal adhesion kinase binding in the regulation of tyrosine phosphorylation of paxillin
-
Thomas J.W., Cooley M.A., Broome J.M., Salgia R., Griffin J.D., Lombardo C.R., and Schaller M.D. The role of focal adhesion kinase binding in the regulation of tyrosine phosphorylation of paxillin. J. Biol. Chem. 274 (1999) 36684-36692
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 36684-36692
-
-
Thomas, J.W.1
Cooley, M.A.2
Broome, J.M.3
Salgia, R.4
Griffin, J.D.5
Lombardo, C.R.6
Schaller, M.D.7
-
36
-
-
0031439110
-
The bovine papillomavirus E6 protein binds to the LD motif repeats of paxillin and blocks its interaction with vinculin and the focal adhesion kinase
-
Tong X., Salgia R., Li J.L., Griffin J.D., and Howley P.M. The bovine papillomavirus E6 protein binds to the LD motif repeats of paxillin and blocks its interaction with vinculin and the focal adhesion kinase. J. Biol. Chem. 272 (1997) 33373-33376
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 33373-33376
-
-
Tong, X.1
Salgia, R.2
Li, J.L.3
Griffin, J.D.4
Howley, P.M.5
-
37
-
-
0035972170
-
A new focal adhesion protein that interacts with integrin-linked kinase and regulates cell adhesion and spreading
-
Tu Y., Huang Y., Zhang Y., Hua Y., and Wu C. A new focal adhesion protein that interacts with integrin-linked kinase and regulates cell adhesion and spreading. J. Cell Biol. 153 (2001) 585-598
-
(2001)
J. Cell Biol.
, vol.153
, pp. 585-598
-
-
Tu, Y.1
Huang, Y.2
Zhang, Y.3
Hua, Y.4
Wu, C.5
-
38
-
-
0033577810
-
Paxillin LD4 motif binds PAK and PIX through a novel 95-kD ankyrin repeat, ARF-GAP protein: A role in cytoskeletal remodeling
-
Turner C.E., Brown M.C., Perrotta J.A., Riedy M.C., Nikolopoulos S.N., McDonald A.R., Bagrodia S., Thomas S., and Leventhal P.S. Paxillin LD4 motif binds PAK and PIX through a novel 95-kD ankyrin repeat, ARF-GAP protein: A role in cytoskeletal remodeling. J. Cell Biol. 145 (1999) 851-863
-
(1999)
J. Cell Biol.
, vol.145
, pp. 851-863
-
-
Turner, C.E.1
Brown, M.C.2
Perrotta, J.A.3
Riedy, M.C.4
Nikolopoulos, S.N.5
McDonald, A.R.6
Bagrodia, S.7
Thomas, S.8
Leventhal, P.S.9
-
39
-
-
51049098984
-
The structure of α-parvin CH2/paxillin LD1 complex reveals a novel modular recognition for focal adhesion assembly
-
Wang X., Fukuda K., Byeon I.-J., Velyvis A., Wu C., Gronenborn A., and Qin J. The structure of α-parvin CH2/paxillin LD1 complex reveals a novel modular recognition for focal adhesion assembly. J. Biol. Chem. 283 (2008) 21113-21119
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 21113-21119
-
-
Wang, X.1
Fukuda, K.2
Byeon, I.-J.3
Velyvis, A.4
Wu, C.5
Gronenborn, A.6
Qin, J.7
-
40
-
-
2542468783
-
Affixin interacts with alpha-actinin and mediates integrin signaling for reorganization of F-actin induced by initial cell-substrate interaction
-
Yamaji S., Suzuki A., Kanamori H., Mishima W., Yoshimi R., Takasaki H., Takabayashi M., Fujimaki K., Fujisawa S., Ohno S., and Ishigatsubo Y. Affixin interacts with alpha-actinin and mediates integrin signaling for reorganization of F-actin induced by initial cell-substrate interaction. J. Cell Biol. 165 (2004) 539-551
-
(2004)
J. Cell Biol.
, vol.165
, pp. 539-551
-
-
Yamaji, S.1
Suzuki, A.2
Kanamori, H.3
Mishima, W.4
Yoshimi, R.5
Takasaki, H.6
Takabayashi, M.7
Fujimaki, K.8
Fujisawa, S.9
Ohno, S.10
Ishigatsubo, Y.11
-
41
-
-
33644836716
-
The gamma-parvin-integrin-linked kinase complex is critically involved in leukocyte-substrate interaction
-
Yoshimi R., Yamaji S., Suzuki A., Mishima W., Okamura M., Obana T., Matsuda C., Miwa Y., Ohno S., and Ishigatsubo Y. The gamma-parvin-integrin-linked kinase complex is critically involved in leukocyte-substrate interaction. J. Immunol. 176 (2006) 3611-3624
-
(2006)
J. Immunol.
, vol.176
, pp. 3611-3624
-
-
Yoshimi, R.1
Yamaji, S.2
Suzuki, A.3
Mishima, W.4
Okamura, M.5
Obana, T.6
Matsuda, C.7
Miwa, Y.8
Ohno, S.9
Ishigatsubo, Y.10
-
42
-
-
34547606042
-
Functional atlas of the integrin adhesome
-
Zaidel-Bar R., Itzkovitz S., Ma'ayan A., Iyengar R., and Geiger B. Functional atlas of the integrin adhesome. Nat. Cell Biol. 9 (2007) 858-867
-
(2007)
Nat. Cell Biol.
, vol.9
, pp. 858-867
-
-
Zaidel-Bar, R.1
Itzkovitz, S.2
Ma'ayan, A.3
Iyengar, R.4
Geiger, B.5
-
43
-
-
4744340477
-
Distinct roles of two structurally closely related focal adhesion proteins, alpha-parvins and beta-parvins, in regulation of cell morphology and survival
-
Zhang Y., Chen K., Tu Y., and Wu C. Distinct roles of two structurally closely related focal adhesion proteins, alpha-parvins and beta-parvins, in regulation of cell morphology and survival. J. Biol. Chem. 279 (2004) 41695-41705
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 41695-41705
-
-
Zhang, Y.1
Chen, K.2
Tu, Y.3
Wu, C.4
-
44
-
-
49649120467
-
GIT1 paxillin-binding domain is a four-helix bundle and it binds to both paxillin LD2 and LD4 motifs
-
Zhang Z.M., Simmermann J.A., Guibao C.D., and Zheng J.J. GIT1 paxillin-binding domain is a four-helix bundle and it binds to both paxillin LD2 and LD4 motifs. J. Biol. Chem. 283 (2008) 18685-18693
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 18685-18693
-
-
Zhang, Z.M.1
Simmermann, J.A.2
Guibao, C.D.3
Zheng, J.J.4
|