Probabilistic phylogenetic inference with insertions and deletions

PLoS Computational Biology

Volumn 4, Issue 9, 2008, Pages

  Rivas, Elena ^a   Eddy, Sean R ^a  

^a HOWARD HUGHES MEDICAL INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALIGNMENT; MARKOV PROCESSES; NUCLEIC ACIDS; PHYLOGENETIC; SOFTWARE TESTING; TREES (MATHEMATICS);

CHANGE-OVER TIME; EVOLUTIONARY MODELS; INSERTIONS AND DELETIONS; MULTIPLE ALIGNMENT; PHYLOGENETIC INFERENCE; PHYLOGENETIC TREES; PHYLOGENETICS; PROBABILISTIC MODELS; PROBABILISTICS; SEQUENCE ANALYSIS;

COMPUTATIONAL EFFICIENCY;

RIBOSOME RNA; DNA;

ALGORITHM; AMINO ACID SUBSTITUTION; ARTICLE; EVOLUTION; GENE DELETION; GENE INSERTION; MAXIMUM LIKELIHOOD METHOD; MODEL; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PROBABILITY; SEQUENCE ANALYSIS; STATISTICAL MODEL; BIOLOGICAL MODEL; BIOLOGY; COMPARATIVE STUDY; COMPUTER PROGRAM; COMPUTER SIMULATION; GENE EXPRESSION REGULATION; GENETICS; MOLECULAR EVOLUTION; PHYLOGENY; POISSON DISTRIBUTION; SEQUENCE ALIGNMENT; STATISTICS;

ALGORITHMS; COMPUTATIONAL BIOLOGY; COMPUTER SIMULATION; DNA; EVOLUTION, MOLECULAR; MARKOV CHAINS; MODELS, GENETIC; MODELS, STATISTICAL; MUTAGENESIS, INSERTIONAL; PHYLOGENY; POISSON DISTRIBUTION; RNA, RIBOSOMAL; SEQUENCE ALIGNMENT; SEQUENCE DELETION; SOFTWARE;

EID: 52949150097     PISSN: 1553734X     EISSN: 15537358     Source Type: Journal    
DOI: 10.1371/journal.pcbi.1000172     Document Type: Article

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