Distribution of indel lengths

Proteins: Structure, Function and Genetics

Volumn 45, Issue 1, 2001, Pages 102-104

  Lassalle, Michael W ^a   Yamada, Hiroaki ^a   Morii, Hisayuki ^b   Ogata, Kazuhiro ^c   Sarai, Akinori ^d   Akasaka, Kazuyuki ^a,e  

^a KOBE UNIVERSITY   (Japan)

^b NATL INST BIOSCI HUM TECHNOL   (Japan)

^c YOKOHAMA CITY UNIVERSITY   (Japan)

^d INST OF PHYS AND CHEMICAL RESEARCH   (Japan)

^e RIKEN HARIMA INSTITUTE   (Japan)

Author keywords

Dynamic programming; Gaps; Insertion and deletion; Protein evolution; Sequence alignment

Indexed keywords

AMINO ACID SEQUENCE; ANALYTIC METHOD; ARTICLE; GENE DELETION; GENE INSERTION; GENETIC PROCEDURES; MODEL; MOLECULAR EVOLUTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; COMPUTATIONAL BIOLOGY; DATABASES, FACTUAL; ENTROPY; EVOLUTION, MOLECULAR; PROBABILITY; PROTEINS; REPRODUCIBILITY OF RESULTS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; SOFTWARE;

EID: 0035479653     PISSN: 08873585     EISSN: None     Source Type: Journal    
DOI: 10.1002/prot.1129     Document Type: Article

References (11)

1. Improved tools for biological sequence analysis
2. Basic local alignment tool
3. Local alignment statistics
4. Rapid and sensitive protein similarity searches
5. Gapped Blast and PSI-Blast: A new generation of protein database search programs
6. Mapping the protein universe
7. A systematic comparison of protein structure classifications: SCOP, CATH and FSSP
8. Optimization of a new score function for the detection of remote homologs
9. Exhaustive matching of the entire protein database