A robust linear regression based algorithm for automated evaluation of peptide identifications from shotgun proteomics by use of reversed-phase liquid chromatography retention time

BMC Bioinformatics

Volumn 9, Issue , 2008, Pages

  Xu, Hua ^a   Yang, Lanhao ^b   Freitas, Michael A ^a  

^a OHIO STATE UNIVERSITY   (United States)

^b OHIO STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AUTOMATED APPROACH; AUTOMATED EVALUATION; DATABASE SEARCH ALGORITHMS; LINEAR REGRESSION MODELS; PEPTIDE IDENTIFICATION; RETENTION TIME PREDICTION; REVERSED-PHASE LIQUID CHROMATOGRAPHY; ROBUST LINEAR REGRESSION;

ALGORITHMS; AUTOMATION; DATABASE SYSTEMS; INFORMATION RETRIEVAL; LINEAR REGRESSION; LIQUID CHROMATOGRAPHY; MOLECULAR BIOLOGY; SEARCH ENGINES;

PEPTIDES;

ALGORITHM; ARTICLE; AUTOMATION; CALIBRATION; DATA BASE; HUMAN; LINEAR REGRESSION ANALYSIS; LIQUID CHROMATOGRAPHY; NONHUMAN; PREDICTION; PROTEIN ANALYSIS; PROTEOMICS; REVERSED PHASE LIQUID CHROMATOGRAPHY; SENSITIVITY AND SPECIFICITY; SHOTGUN PROTEOMICS; TANDEM MASS SPECTROMETRY; AMINO ACID SEQUENCE; ARTIFICIAL INTELLIGENCE; AUTOMATED PATTERN RECOGNITION; CHEMICAL MODEL; CHEMISTRY; COMPUTER SIMULATION; METHODOLOGY; MOLECULAR GENETICS; REGRESSION ANALYSIS; SEQUENCE ANALYSIS; STATISTICAL MODEL; TIME;

PEPTIDE; PROTEOME;

ALGORITHMS; AMINO ACID SEQUENCE; ARTIFICIAL INTELLIGENCE; CHROMATOGRAPHY, LIQUID; COMPUTER SIMULATION; LINEAR MODELS; MODELS, CHEMICAL; MOLECULAR SEQUENCE DATA; PATTERN RECOGNITION, AUTOMATED; PEPTIDES; PROTEOME; REGRESSION ANALYSIS; SEQUENCE ANALYSIS, PROTEIN; TIME FACTORS;

EID: 52749096518     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-347     Document Type: Article

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