-
1
-
-
0026085424
-
Suppression of ribosomal reinitiation at upstream open reading frames in amino acid-starved cells forms the basis for GCN4 translational control
-
Abastado, J.P., Miller, P.F., Jackson, B.M., and Hinnebusch, A.G. 1991. Suppression of ribosomal reinitiation at upstream open reading frames in amino acid-starved cells forms the basis for GCN4 translational control. Mol. Cell. Biol. 11: 486-496.
-
(1991)
Mol. Cell. Biol
, vol.11
, pp. 486-496
-
-
Abastado, J.P.1
Miller, P.F.2
Jackson, B.M.3
Hinnebusch, A.G.4
-
2
-
-
27144439460
-
Contribution of 16S rRNA nucleotides forming the 30S subunit A and P sites to translation in Escherichia coli
-
Abdi, N.M. and Fredrick, K. 2005. Contribution of 16S rRNA nucleotides forming the 30S subunit A and P sites to translation in Escherichia coli. RNA 11: 1624-1632.
-
(2005)
RNA
, vol.11
, pp. 1624-1632
-
-
Abdi, N.M.1
Fredrick, K.2
-
3
-
-
33748531313
-
Where to begin? The mechanism of translation initiation codon selection in eukaryotes
-
Algire, M.A. and Lorsch, J.R. 2006. Where to begin? The mechanism of translation initiation codon selection in eukaryotes. Curr. Opin. Chem. Biol. 10: 480-486.
-
(2006)
Curr. Opin. Chem. Biol
, vol.10
, pp. 480-486
-
-
Algire, M.A.1
Lorsch, J.R.2
-
4
-
-
0036224032
-
Development and characterization of a reconstituted yeast translation initiation system
-
Algire, M.A., Maag, D., Savio, P., Acker, M.G., Tarun Jr., S.Z., Sachs, A.B., Asano, K., Nielsen, K.H., Olsen, D.S., Phan, L., et al. 2002. Development and characterization of a reconstituted yeast translation initiation system. RNA 8: 382-397.
-
(2002)
RNA
, vol.8
, pp. 382-397
-
-
Algire, M.A.1
Maag, D.2
Savio, P.3
Acker, M.G.4
Tarun Jr., S.Z.5
Sachs, A.B.6
Asano, K.7
Nielsen, K.H.8
Olsen, D.S.9
Phan, L.10
-
5
-
-
20444365142
-
The cryo-EM structure of a translation initiation complex from Escherichia coli
-
Allen, G.S., Zavialov, A., Gursky, R., Ehrenberg, M., and Frank, J. 2005. The cryo-EM structure of a translation initiation complex from Escherichia coli. Cell 121: 703-712.
-
(2005)
Cell
, vol.121
, pp. 703-712
-
-
Allen, G.S.1
Zavialov, A.2
Gursky, R.3
Ehrenberg, M.4
Frank, J.5
-
6
-
-
33745943856
-
How initiation factors maximize the accuracy of tRNA selection in initiation of bacterial protein synthesis
-
Antoun, A., Pavlov, M.Y., Lovmar, M., and Ehrenberg, M. 2006. How initiation factors maximize the accuracy of tRNA selection in initiation of bacterial protein synthesis. Mol. Cell 23: 183-193.
-
(2006)
Mol. Cell
, vol.23
, pp. 183-193
-
-
Antoun, A.1
Pavlov, M.Y.2
Lovmar, M.3
Ehrenberg, M.4
-
7
-
-
33750488430
-
Structural basis for mRNA and tRNA positioning on the ribosome
-
Berk, V., Zhang, W., Pai, R.D., and Cate, J.H. 2006. Structural basis for mRNA and tRNA positioning on the ribosome. Proc. Natl. Acad. Sci. 103: 15830-15834.
-
(2006)
Proc. Natl. Acad. Sci
, vol.103
, pp. 15830-15834
-
-
Berk, V.1
Zhang, W.2
Pai, R.D.3
Cate, J.H.4
-
8
-
-
34249069609
-
Dissociation of eIF1 from the 40S ribosomal subunit is a key step in start codon selection in vivo
-
Cheung, Y.N., Maag, D., Mitchell, S.F., Fekete, C.A., Algire, M.A., Takacs, J.E., Shirokikh, N., Pestova, T., Lorsch, J.R., and Hinnebusch, A.G. 2007. Dissociation of eIF1 from the 40S ribosomal subunit is a key step in start codon selection in vivo. Genes & Dev. 21: 1217-1230.
-
(2007)
Genes & Dev
, vol.21
, pp. 1217-1230
-
-
Cheung, Y.N.1
Maag, D.2
Mitchell, S.F.3
Fekete, C.A.4
Algire, M.A.5
Takacs, J.E.6
Shirokikh, N.7
Pestova, T.8
Lorsch, J.R.9
Hinnebusch, A.G.10
-
10
-
-
27144517608
-
The eIF1A C-terminal domain promotes initiation complex assembly, scanning and AUG selection in vivo
-
Fekete, C.A., Applefield, D.J., Blakely, S.A., Shirokikh, N., Pestova, T., Lorsch, J.R., and Hinnebusch, A.G. 2005. The eIF1A C-terminal domain promotes initiation complex assembly, scanning and AUG selection in vivo. EMBO J. 24: 3588-3601.
-
(2005)
EMBO J
, vol.24
, pp. 3588-3601
-
-
Fekete, C.A.1
Applefield, D.J.2
Blakely, S.A.3
Shirokikh, N.4
Pestova, T.5
Lorsch, J.R.6
Hinnebusch, A.G.7
-
11
-
-
33947595152
-
N- and C-terminal residues of eIF1A have opposing effects on the fidelity of start codon selection
-
Fekete, C.A., Mitchell, S.F., Cherkasova, V.A., Applefield, D., Algire, M.A., Maag, D., Saini, A., Lorsch, J.R., and Hinnebusch, A.G. 2007. N- and C-terminal residues of eIF1A have opposing effects on the fidelity of start codon selection. EMBO J. 26: 1602-1614.
-
(2007)
EMBO J
, vol.26
, pp. 1602-1614
-
-
Fekete, C.A.1
Mitchell, S.F.2
Cherkasova, V.A.3
Applefield, D.4
Algire, M.A.5
Maag, D.6
Saini, A.7
Lorsch, J.R.8
Hinnebusch, A.G.9
-
12
-
-
34347263795
-
Reconfiguration of yeast 40S ribosomal subunit domains by the translation initiation multifactor complex
-
Gilbert, R.J., Gordiyenko, Y., von der Haar, T., Sonnen, A.F., Hofmann, G., Nardelli, M., Stuart, D.I., and McCarthy, J.E. 2007. Reconfiguration of yeast 40S ribosomal subunit domains by the translation initiation multifactor complex. Proc. Natl. Acad. Sci. 104: 5788-5793.
-
(2007)
Proc. Natl. Acad. Sci
, vol.104
, pp. 5788-5793
-
-
Gilbert, R.J.1
Gordiyenko, Y.2
von der Haar, T.3
Sonnen, A.F.4
Hofmann, G.5
Nardelli, M.6
Stuart, D.I.7
McCarthy, J.E.8
-
13
-
-
27144510561
-
Translational regulation of GCN4 and the general amino acid control of yeast
-
Hinnebusch, A.G. 2005a. Translational regulation of GCN4 and the general amino acid control of yeast. Annu. Rev. Microbiol. 59: 407-450.
-
(2005)
Annu. Rev. Microbiol
, vol.59
, pp. 407-450
-
-
Hinnebusch, A.G.1
-
14
-
-
27144510561
-
Translational regulation of gcn4 and the general amino acid control of yeast
-
Hinnebusch, A.G. 2005b. Translational regulation of gcn4 and the general amino acid control of yeast. Annu. Rev. Microbiol. 59: 407-450.
-
(2005)
Annu. Rev. Microbiol
, vol.59
, pp. 407-450
-
-
Hinnebusch, A.G.1
-
15
-
-
50049130501
-
-
Hinnebusch, A.G., Dever, T.E., and Asano, K. 2007. Mechanism of translation initiation in the yeast Saccharomyces cerevisiae. In Translational control in biology and medicine (eds. N.S. Michael Mathews and John W.B. Hershey), pp. 225-268. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
Hinnebusch, A.G., Dever, T.E., and Asano, K. 2007. Mechanism of translation initiation in the yeast Saccharomyces cerevisiae. In Translational control in biology and medicine (eds. N.S. Michael Mathews and John W.B. Hershey), pp. 225-268. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
-
-
-
16
-
-
33646168052
-
Yeast initiator tRNA identity elements cooperate to influence multiple steps of translation initiation
-
Kapp, L.D., Kolitz, S.E., and Lorsch, J.R. 2006. Yeast initiator tRNA identity elements cooperate to influence multiple steps of translation initiation. RNA 12: 751-764.
-
(2006)
RNA
, vol.12
, pp. 751-764
-
-
Kapp, L.D.1
Kolitz, S.E.2
Lorsch, J.R.3
-
17
-
-
33748582906
-
Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements
-
Korostelev, A., Trakhanov, S., Laurberg, M., and Noller, H.F. 2006. Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements. Cell 126: 1065-1077.
-
(2006)
Cell
, vol.126
, pp. 1065-1077
-
-
Korostelev, A.1
Trakhanov, S.2
Laurberg, M.3
Noller, H.F.4
-
18
-
-
27944442879
-
Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA
-
Lancaster, L. and Noller, H.F. 2005. Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA. Mol. Cell 20: 623-632.
-
(2005)
Mol. Cell
, vol.20
, pp. 623-632
-
-
Lancaster, L.1
Noller, H.F.2
-
19
-
-
0345305759
-
Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing
-
Lomakin, I.B., Kolupaeva, V.G., Marintchev, A., Wagner, G., and Pestova, T.V. 2003. Position of eukaryotic initiation factor eIF1 on the 40S ribosomal subunit determined by directed hydroxyl radical probing. Genes & Dev. 17: 2786-2797.
-
(2003)
Genes & Dev
, vol.17
, pp. 2786-2797
-
-
Lomakin, I.B.1
Kolupaeva, V.G.2
Marintchev, A.3
Wagner, G.4
Pestova, T.V.5
-
20
-
-
0037675905
-
Communication between eukaryotic translation initiation factors 1 and 1A on the yeast small ribosomal subunit
-
Maag, D. and Lorsch, J.R. 2003. Communication between eukaryotic translation initiation factors 1 and 1A on the yeast small ribosomal subunit. J. Mol. Biol. 330: 917-924.
-
(2003)
J. Mol. Biol
, vol.330
, pp. 917-924
-
-
Maag, D.1
Lorsch, J.R.2
-
21
-
-
25644436944
-
Translation initiation: Structures, mechanisms and evolution
-
Marintchev, A. and Wagner, G. 2004. Translation initiation: Structures, mechanisms and evolution. Q. Rev. Biophys. 37: 197-284.
-
(2004)
Q. Rev. Biophys
, vol.37
, pp. 197-284
-
-
Marintchev, A.1
Wagner, G.2
-
22
-
-
0023341242
-
A segment of GCN4 mRNA containing the upstream AUG codons confers translational control upon a heterologous yeast transcript
-
Mueller, P.P., Harashima, S., and Hinnebusch, A.G. 1987. A segment of GCN4 mRNA containing the upstream AUG codons confers translational control upon a heterologous yeast transcript. Proc. Natl. Acad. Sci. 84: 2863-2867.
-
(1987)
Proc. Natl. Acad. Sci
, vol.84
, pp. 2863-2867
-
-
Mueller, P.P.1
Harashima, S.2
Hinnebusch, A.G.3
-
23
-
-
34047263278
-
The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome
-
Passmore, L.A., Schmeing, T.M., Maag, D., Applefield, D.J., Acker, M.G., Algire, M.A., Lorsch, J.R., and Ramakrishnan, V. 2007. The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome. Mol. Cell 26: 41-50.
-
(2007)
Mol. Cell
, vol.26
, pp. 41-50
-
-
Passmore, L.A.1
Schmeing, T.M.2
Maag, D.3
Applefield, D.J.4
Acker, M.G.5
Algire, M.A.6
Lorsch, J.R.7
Ramakrishnan, V.8
-
24
-
-
50049088848
-
-
Pestova, T.V., Lorsch, J.R., and Hellen, C.U.T. 2007. The mechanism of translation initiation in eukaryotes. In Translational control in biology and medicine (eds. N.S. Michael Mathews and John W.B. Hershey), pp. 87-128. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
Pestova, T.V., Lorsch, J.R., and Hellen, C.U.T. 2007. The mechanism of translation initiation in eukaryotes. In Translational control in biology and medicine (eds. N.S. Michael Mathews and John W.B. Hershey), pp. 87-128. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
-
-
-
25
-
-
44649095899
-
Ribosomal position and contacts of mRNA in eukaryotic translation initiation complexes
-
Pisarev, A.V., Kolupaeva, V.G., Yusupov, M.M., Hellen, C.U., and Pestova, T.V. 2008. Ribosomal position and contacts of mRNA in eukaryotic translation initiation complexes. EMBO J. 27: 1609-1621.
-
(2008)
EMBO J
, vol.27
, pp. 1609-1621
-
-
Pisarev, A.V.1
Kolupaeva, V.G.2
Yusupov, M.M.3
Hellen, C.U.4
Pestova, T.V.5
-
26
-
-
36249023651
-
Characterization of 16S rRNA mutations that decrease the fidelity of translation initiation
-
Qin, D., Abdi, N.M., and Fredrick, K. 2007. Characterization of 16S rRNA mutations that decrease the fidelity of translation initiation. RNA 13: 2348-2355.
-
(2007)
RNA
, vol.13
, pp. 2348-2355
-
-
Qin, D.1
Abdi, N.M.2
Fredrick, K.3
-
27
-
-
33845228894
-
An arc of unpaired "hinge bases" facilitates information exchange among functional centers of the ribosome
-
Rakauskaite, R. and Dinman, J.D. 2006. An arc of unpaired "hinge bases" facilitates information exchange among functional centers of the ribosome. Mol. Cell. Biol. 26: 8992-9002.
-
(2006)
Mol. Cell. Biol
, vol.26
, pp. 8992-9002
-
-
Rakauskaite, R.1
Dinman, J.D.2
-
28
-
-
27644491082
-
Structures of the bacterial ribosome at 3.5 Å resolution
-
Schuwirth, B.S., Borovinskaya, M.A., Hau, C.W., Zhang, W., Vila-Sanjurjo, A., Holton, J.M., and Cate, J.H. 2005. Structures of the bacterial ribosome at 3.5 Å resolution. Science 310: 827-834.
-
(2005)
Science
, vol.310
, pp. 827-834
-
-
Schuwirth, B.S.1
Borovinskaya, M.A.2
Hau, C.W.3
Zhang, W.4
Vila-Sanjurjo, A.5
Holton, J.M.6
Cate, J.H.7
-
29
-
-
33749354360
-
Structure of the 70S ribosome complexed with mRNA and tRNA
-
Selmer, M., Dunham, C.M., Murphy, F.V.T., Weixlbaumer, A., Petry, S., Kelley, A.C., Weir, J.R., and Ramakrishnan, V. 2006. Structure of the 70S ribosome complexed with mRNA and tRNA. Science 313: 1935-1942.
-
(2006)
Science
, vol.313
, pp. 1935-1942
-
-
Selmer, M.1
Dunham, C.M.2
Murphy, F.V.T.3
Weixlbaumer, A.4
Petry, S.5
Kelley, A.C.6
Weir, J.R.7
Ramakrishnan, V.8
-
30
-
-
0024271795
-
Antibiotic resistance mutations in ribosomal RNA genes of Escherichia coli
-
Sigmund, C.D., Ettayebi, M., Borden, A., and Morgan, E.A. 1988. Antibiotic resistance mutations in ribosomal RNA genes of Escherichia coli. Methods Enzymol. 164: 673-690.
-
(1988)
Methods Enzymol
, vol.164
, pp. 673-690
-
-
Sigmund, C.D.1
Ettayebi, M.2
Borden, A.3
Morgan, E.A.4
-
31
-
-
0035798380
-
Structure of the 80S ribosome from Saccharomyces cerevisiae - tRNA-ribosome and subunit-subunit interactions
-
Spahn, C.M., Beckmann, R., Eswar, N., Penczek, P.A., Sali, A., Blobel, G., and Frank, J. 2001a. Structure of the 80S ribosome from Saccharomyces cerevisiae - tRNA-ribosome and subunit-subunit interactions. Cell 107: 373-386.
-
(2001)
Cell
, vol.107
, pp. 373-386
-
-
Spahn, C.M.1
Beckmann, R.2
Eswar, N.3
Penczek, P.A.4
Sali, A.5
Blobel, G.6
Frank, J.7
-
32
-
-
0035831269
-
Hepatitis C virus IRES RNA-induced changes in the conformation of the 40S ribosomal subunit
-
Spahn, C.M., Kieft, J.S., Grassucci, R.A., Penczek, P.A., Zhou, K., Doudna, J.A., and Frank, J. 2001b. Hepatitis C virus IRES RNA-induced changes in the conformation of the 40S ribosomal subunit. Science 291: 1959-1962.
-
(2001)
Science
, vol.291
, pp. 1959-1962
-
-
Spahn, C.M.1
Kieft, J.S.2
Grassucci, R.A.3
Penczek, P.A.4
Zhou, K.5
Doudna, J.A.6
Frank, J.7
-
33
-
-
1842576803
-
Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation
-
Spahn, C.M., Gomez-Lorenzo, M.G., Grassucci, R.A., Jorgensen, R., Andersen, G.R., Beckmann, R., Penczek, P.A., Ballesta, J.P., and Frank, J. 2004a. Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation. EMBO J. 23: 1008-1019.
-
(2004)
EMBO J
, vol.23
, pp. 1008-1019
-
-
Spahn, C.M.1
Gomez-Lorenzo, M.G.2
Grassucci, R.A.3
Jorgensen, R.4
Andersen, G.R.5
Beckmann, R.6
Penczek, P.A.7
Ballesta, J.P.8
Frank, J.9
-
34
-
-
4644247805
-
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: The IRES functions as an RNA-based translation factor
-
Spahn, C.M., Jan, E., Mulder, A., Grassucci, R.A., Sarnow, P., and Frank, J. 2004b. Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: The IRES functions as an RNA-based translation factor. Cell 118: 465-475.
-
(2004)
Cell
, vol.118
, pp. 465-475
-
-
Spahn, C.M.1
Jan, E.2
Mulder, A.3
Grassucci, R.A.4
Sarnow, P.5
Frank, J.6
-
35
-
-
50049122195
-
-
Taylor, D.J., Frank, J., and Kinzy, T.G. 2007. Structure and function of the eukaryotic ribosome and elongation factors. In Translational control in biology and medicine (eds. N.S. Michael Mathews and John W.B. Hershey), pp. 59-85. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
Taylor, D.J., Frank, J., and Kinzy, T.G. 2007. Structure and function of the eukaryotic ribosome and elongation factors. In Translational control in biology and medicine (eds. N.S. Michael Mathews and John W.B. Hershey), pp. 59-85. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
-
-
-
36
-
-
0024343499
-
Mutations in the structural genes for eukaryotic initiation factors 2α and 2β of Saccharomyces cerevisiae disrupt translational control of GCN4 mRNA
-
Williams, N.P., Hinnebusch, A.G., and Donahue, T.F. 1989. Mutations in the structural genes for eukaryotic initiation factors 2α and 2β of Saccharomyces cerevisiae disrupt translational control of GCN4 mRNA. Proc. Natl. Acad. Sci. 86: 7515-7519.
-
(1989)
Proc. Natl. Acad. Sci
, vol.86
, pp. 7515-7519
-
-
Williams, N.P.1
Hinnebusch, A.G.2
Donahue, T.F.3
-
37
-
-
0035958587
-
The path of messenger RNA through the ribosome
-
Yusupova, G.Z., Yusupov, M.M., Cate, J.H., and Noller, H.F. 2001. The path of messenger RNA through the ribosome. Cell 106: 233-241.
-
(2001)
Cell
, vol.106
, pp. 233-241
-
-
Yusupova, G.Z.1
Yusupov, M.M.2
Cate, J.H.3
Noller, H.F.4
|