The path of messenger RNA through the ribosome

Cell

Volumn 106, Issue 2, 2001, Pages 233-241

  Yusupova, Gulnara Zh ^a   Yusupov, Marat M ^a   Cate, J H D ^b   Noller, Harry F ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b WHITEHEAD INSTITUTE FOR BIOMEDICAL RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; RIBOSOME PROTEIN; RIBOSOME RNA;

ARTICLE; CODON; CRYSTAL STRUCTURE; FOURIER ANALYSIS; NONHUMAN; PRIORITY JOURNAL; RIBOSOME; RNA TRANSLATION; X RAY CRYSTALLOGRAPHY;

EID: 0035958587     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(01)00435-4     Document Type: Article

References (39)

1. EF-G-dependent GTP hydrolysis induces translocation accompanied by large conformational changes in the 70S ribosome
2. Programmed ribosomal frameshifting: Much ado about knotting!
3. Transition of the mRNA sequence downstream from the initiation codon into a single-stranded conformation is strongly promoted by binding of the initiator tRNA
4. Template-free ribosomal synthesis of polylysine from lysyl-tRNA
5. The mRNA binding track in the Escherichia coli ribosome for mRNAs of different sequences
6. Arrangement of messenger RNA on Escherichia coli ribosomes with respect to 10 16S rRNA cross-linking sites
7. Direct translation of a circular messenger DNA
8. Characterization of an efficient coronavirus ribosomal frameshifting signal: Requirement for an RNA pseudoknot
9. The structure of ribosomal RNA: A three-dimensional jigsaw puzzle
10. Ribbons
11. X-ray crystal structures of 70S ribosome functional complexes
12. mRNA-ribosome interactions
13. Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region; a site-directed cross-linking study with mRNA analogues
14. A model of protein synthesis based on cryo-electron microscopy of the E. coli ribosome
15. Factor-free ("non-enzymic") and factor-dependent systems of translation of polyuridylic acid by Escherichia coli ribosomes
16. The cross-link from the upstream region of mRNA to ribosomal protein S7 is located in the C-terminal peptide: Experimental verification of a prediction from modeling studies
17. Initial rate kinetic analysis of the mechanism of initiation complex formation and the role of initiation factor IF-3
18. Footprinting mRNA-ribosome complexes with chemical probes
19. Electron-density map interpretation
20. Distribution of cross-links between mRNA analogues and 16S rRNA in Escherichia coli 70S ribosomes made under equilibrium conditions and their response to tRNA binding
21. Three-dimensional reconstruction of the Escherichia coli 30S ribosomal subunit in ice
22. Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes
23. Interaction of antibiotics with functional sites in 16S ribosomal RNA
24. Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16S rRNA
25. Recognition of cognate transfer RNA by the 30S ribosomal subunit
26. Studies on the formation of transfer ribonucleic acid-ribosome complexes. II. A possible site on the 50 S subunit protecting aminoacyl transfer ribonucleic acid from deacylation
27. Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between '+1' and '+16' on the mRNA, downstream from the decoding site
28. Contacts between 16S ribosomal RNA and mRNA, within the spacer region separating the AUG initiator codon and the Shine-Dalgarno sequence; a site-directed cross-linking study
29. Molecular basis of double-stranded RNA-protein interactions: Structure of dsRNA-binding domain complexed with dsRNA
30. Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution
31. The path of mRNA through the bacterial ribosome: A site-directed crosslinking study using new photoreactive derivatives of guanosine and uridine
32. How does the mRNA pass through the ribosome?
33. The 3′-terminal sequence of E coli 16S ribosomal RNA complementarity to nonsense triplets and ribosome binding sites
34. Polypeptide chain initiation: Nucleotide sequences of the three ribosomal binding sites in bacteriophage R17 RNA
35. Identification of bases in 16S rRNA essential for tRNA binding at the 30S ribosomal P site
36. Structure of the 30S ribosomal subunit
37. Crystal structure of the ribosome at 5.5 Å resolution