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Volumn 23, Issue 2, 2006, Pages 183-193

How Initiation Factors Maximize the Accuracy of tRNA Selection in Initiation of Bacterial Protein Synthesis

Author keywords

RNA

Indexed keywords

BACTERIAL PROTEIN; BACTERIAL RNA; DOCKING PROTEIN; INITIATION FACTOR 1; INITIATION FACTOR 2; INITIATION FACTOR 3; TRANSFER RNA;

EID: 33745943856     PISSN: 10972765     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.molcel.2006.05.030     Document Type: Article
Times cited : (90)

References (29)
  • 1
    • 20444365142 scopus 로고    scopus 로고
    • The cryo-EM structure of a translation initiation complex from Escherichia coli
    • Allen G.S., Zavialov A., Gursky R., Ehrenberg M., and Frank J. The cryo-EM structure of a translation initiation complex from Escherichia coli. Cell 121 (2005) 703-712
    • (2005) Cell , vol.121 , pp. 703-712
    • Allen, G.S.1    Zavialov, A.2    Gursky, R.3    Ehrenberg, M.4    Frank, J.5
  • 2
    • 0142041880 scopus 로고    scopus 로고
    • The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis
    • Antoun A., Pavlov M.Y., Andersson K., Tenson T., and Ehrenberg M. The roles of initiation factor 2 and guanosine triphosphate in initiation of protein synthesis. EMBO J. 22 (2003) 5593-5601
    • (2003) EMBO J. , vol.22 , pp. 5593-5601
    • Antoun, A.1    Pavlov, M.Y.2    Andersson, K.3    Tenson, T.4    Ehrenberg, M.5
  • 3
    • 2342547059 scopus 로고    scopus 로고
    • Ribosome formation from subunits studied by stopped-flow and Rayleigh light scattering
    • Antoun A., Pavlov M.Y., Tenson T., and Ehrenberg M.M. Ribosome formation from subunits studied by stopped-flow and Rayleigh light scattering. Biol. Proced. Online 6 (2004) 35-54
    • (2004) Biol. Proced. Online , vol.6 , pp. 35-54
    • Antoun, A.1    Pavlov, M.Y.2    Tenson, T.3    Ehrenberg, M.M.4
  • 4
    • 33745763700 scopus 로고    scopus 로고
    • How initiation factors tune the rate of initiation of protein synthesis in bacteria
    • Antoun A., Pavlov M.Y., Lovmar M., and Ehrenberg M. How initiation factors tune the rate of initiation of protein synthesis in bacteria. EMBO J. 25 (2006) 2539-2550
    • (2006) EMBO J. , vol.25 , pp. 2539-2550
    • Antoun, A.1    Pavlov, M.Y.2    Lovmar, M.3    Ehrenberg, M.4
  • 5
    • 0022887593 scopus 로고
    • Escherichia coli protein synthesis initiation factor IF3 controls its own gene expression at the translational level in vivo
    • Butler J.S., Springer M., Dondon J., Graffe M., and Grunberg-Manago M. Escherichia coli protein synthesis initiation factor IF3 controls its own gene expression at the translational level in vivo. J. Mol. Biol. 192 (1986) 767-780
    • (1986) J. Mol. Biol. , vol.192 , pp. 767-780
    • Butler, J.S.1    Springer, M.2    Dondon, J.3    Graffe, M.4    Grunberg-Manago, M.5
  • 6
    • 0023038109 scopus 로고
    • Mechanism of translational initiation in prokaryotes. Evidence for a direct effect of IF2 on the activity of the 30 S ribosomal subunit
    • Canonaco M.A., Calogero R.A., and Gualerzi C.O. Mechanism of translational initiation in prokaryotes. Evidence for a direct effect of IF2 on the activity of the 30 S ribosomal subunit. FEBS Lett. 207 (1986) 198-204
    • (1986) FEBS Lett. , vol.207 , pp. 198-204
    • Canonaco, M.A.1    Calogero, R.A.2    Gualerzi, C.O.3
  • 7
    • 0028121106 scopus 로고
    • Translation initiation factor IF1 is essential for cell viability in Escherichia coli
    • Cummings H.S., and Hershey J.W. Translation initiation factor IF1 is essential for cell viability in Escherichia coli. J. Bacteriol. 176 (1994) 198-205
    • (1994) J. Bacteriol. , vol.176 , pp. 198-205
    • Cummings, H.S.1    Hershey, J.W.2
  • 8
    • 0034759978 scopus 로고    scopus 로고
    • Interaction of translation initiation factor 3 with the 30S ribosomal subunit
    • Dallas A., and Noller H.F. Interaction of translation initiation factor 3 with the 30S ribosomal subunit. Mol. Cell 8 (2001) 855-864
    • (2001) Mol. Cell , vol.8 , pp. 855-864
    • Dallas, A.1    Noller, H.F.2
  • 9
    • 0025291366 scopus 로고
    • High-level translation initiation
    • Gold L., and Stormo G.D. High-level translation initiation. Methods Enzymol. 185 (1990) 89-93
    • (1990) Methods Enzymol. , vol.185 , pp. 89-93
    • Gold, L.1    Stormo, G.D.2
  • 10
    • 0025365804 scopus 로고
    • Initiation of mRNA translation in prokaryotes
    • Gualerzi C.O., and Pon C.L. Initiation of mRNA translation in prokaryotes. Biochemistry 29 (1990) 5881-5889
    • (1990) Biochemistry , vol.29 , pp. 5881-5889
    • Gualerzi, C.O.1    Pon, C.L.2
  • 11
    • 0024835265 scopus 로고
    • Selection of the initiator tRNA by Escherichia coli initiation factors
    • Hartz D., McPheeters D.S., and Gold L. Selection of the initiator tRNA by Escherichia coli initiation factors. Genes Dev. 3 (1989) 1899-1912
    • (1989) Genes Dev. , vol.3 , pp. 1899-1912
    • Hartz, D.1    McPheeters, D.S.2    Gold, L.3
  • 12
    • 0025018043 scopus 로고
    • Domains of initiator tRNA and initiation codon crucial for initiator tRNA selection by Escherichia coli IF3
    • Hartz D., Binkley J., Hollingsworth T., and Gold L. Domains of initiator tRNA and initiation codon crucial for initiator tRNA selection by Escherichia coli IF3. Genes Dev. 4 (1990) 1790-1800
    • (1990) Genes Dev. , vol.4 , pp. 1790-1800
    • Hartz, D.1    Binkley, J.2    Hollingsworth, T.3    Gold, L.4
  • 13
    • 4344693455 scopus 로고    scopus 로고
    • Creating ribosomes with an all-RNA 30S subunit P site
    • Hoang L., Fredrick K., and Noller H.F. Creating ribosomes with an all-RNA 30S subunit P site. Proc. Natl. Acad. Sci. USA 101 (2004) 12439-12443
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 12439-12443
    • Hoang, L.1    Fredrick, K.2    Noller, H.F.3
  • 14
    • 0018498843 scopus 로고
    • Nucleoside triphosphate regeneration decreases the frequency of translation errors
    • Jelenc P.C., and Kurland C.G. Nucleoside triphosphate regeneration decreases the frequency of translation errors. Proc. Natl. Acad. Sci. USA 76 (1979) 3174-3178
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 3174-3178
    • Jelenc, P.C.1    Kurland, C.G.2
  • 15
    • 27944442879 scopus 로고    scopus 로고
    • Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA
    • Lancaster L., and Noller H.F. Involvement of 16S rRNA nucleotides G1338 and A1339 in discrimination of initiator tRNA. Mol. Cell 20 (2005) 623-632
    • (2005) Mol. Cell , vol.20 , pp. 623-632
    • Lancaster, L.1    Noller, H.F.2
  • 16
    • 0029904026 scopus 로고    scopus 로고
    • Role of the three consecutive G:C base pairs conserved in the anticodon stem of initiator tRNAs in initiation of protein synthesis in Escherichia coli
    • Mandal N., Mangroo D., Dalluge J.J., McCloskey J.A., and Rajbhandary U.L. Role of the three consecutive G:C base pairs conserved in the anticodon stem of initiator tRNAs in initiation of protein synthesis in Escherichia coli. RNA 2 (1996) 473-482
    • (1996) RNA , vol.2 , pp. 473-482
    • Mandal, N.1    Mangroo, D.2    Dalluge, J.J.3    McCloskey, J.A.4    Rajbhandary, U.L.5
  • 17
    • 0032795785 scopus 로고    scopus 로고
    • Discrimination by Escherichia coli initiation factor IF3 against initiation on non-canonical codons relies on complementarity rules
    • Meinnel T., Sacerdot C., Graffe M., Blanquet S., and Springer M. Discrimination by Escherichia coli initiation factor IF3 against initiation on non-canonical codons relies on complementarity rules. J. Mol. Biol. 290 (1999) 825-837
    • (1999) J. Mol. Biol. , vol.290 , pp. 825-837
    • Meinnel, T.1    Sacerdot, C.2    Graffe, M.3    Blanquet, S.4    Springer, M.5
  • 19
    • 14544293652 scopus 로고    scopus 로고
    • The 30S ribosomal P site: a function of 16S rRNA
    • Noller H.F., Hoang L., and Fredrick K. The 30S ribosomal P site: a function of 16S rRNA. FEBS Lett. 579 (2005) 855-858
    • (2005) FEBS Lett. , vol.579 , pp. 855-858
    • Noller, H.F.1    Hoang, L.2    Fredrick, K.3
  • 20
    • 0037184536 scopus 로고    scopus 로고
    • Selection of tRNA by the ribosome requires a transition from an open to a closed form
    • Ogle J.M., Murphy F.V., Tarry M.J., and Ramakrishnan V. Selection of tRNA by the ribosome requires a transition from an open to a closed form. Cell 111 (2002) 721-732
    • (2002) Cell , vol.111 , pp. 721-732
    • Ogle, J.M.1    Murphy, F.V.2    Tarry, M.J.3    Ramakrishnan, V.4
  • 21
    • 0030928327 scopus 로고    scopus 로고
    • Fast recycling of Escherichia coli ribosomes requires both ribosome recycling factor (RRF) and release factor RF3
    • Pavlov M.Y., Freistroffer D.V., MacDougall J., Buckingham R.H., and Ehrenberg M. Fast recycling of Escherichia coli ribosomes requires both ribosome recycling factor (RRF) and release factor RF3. EMBO J. 16 (1997) 4134-4141
    • (1997) EMBO J. , vol.16 , pp. 4134-4141
    • Pavlov, M.Y.1    Freistroffer, D.V.2    MacDougall, J.3    Buckingham, R.H.4    Ehrenberg, M.5
  • 22
    • 0028125575 scopus 로고
    • Initiator transfer RNAs
    • RajBhandary U.L. Initiator transfer RNAs. J. Bacteriol. 176 (1994) 547-552
    • (1994) J. Bacteriol. , vol.176 , pp. 547-552
    • RajBhandary, U.L.1
  • 24
    • 0027383837 scopus 로고
    • Nature of the ribosomal mRNA track: analysis of ribosome-binding sites containing different sequences and secondary structures
    • Ringquist S., MacDonald M., Gibson T., and Gold L. Nature of the ribosomal mRNA track: analysis of ribosome-binding sites containing different sequences and secondary structures. Biochemistry 32 (1993) 10254-10262
    • (1993) Biochemistry , vol.32 , pp. 10254-10262
    • Ringquist, S.1    MacDonald, M.2    Gibson, T.3    Gold, L.4
  • 25
    • 0017077686 scopus 로고
    • Specificity and properties of the destabilization, induced by initiation factor IF-3, of ternary complexes of the 30-S ribosomal subunit, aminoacyl-tRNA and polynucleotides
    • Risuleo G., Gualerzi C., and Pon C. Specificity and properties of the destabilization, induced by initiation factor IF-3, of ternary complexes of the 30-S ribosomal subunit, aminoacyl-tRNA and polynucleotides. Eur. J. Biochem. 67 (1976) 603-613
    • (1976) Eur. J. Biochem. , vol.67 , pp. 603-613
    • Risuleo, G.1    Gualerzi, C.2    Pon, C.3
  • 26
    • 0029742167 scopus 로고    scopus 로고
    • The role of the AUU initiation codon in the negative feedback regulation of the gene for translation initiation factor IF3 in Escherichia coli
    • Sacerdot C., Chiaruttini C., Engst K., Graffe M., Milet M., Mathy N., Dondon J., and Springer M. The role of the AUU initiation codon in the negative feedback regulation of the gene for translation initiation factor IF3 in Escherichia coli. Mol. Microbiol. 21 (1996) 331-346
    • (1996) Mol. Microbiol. , vol.21 , pp. 331-346
    • Sacerdot, C.1    Chiaruttini, C.2    Engst, K.3    Graffe, M.4    Milet, M.5    Mathy, N.6    Dondon, J.7    Springer, M.8
  • 27
    • 0016154301 scopus 로고
    • The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites
    • Shine J., and Dalgarno L. The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc. Natl. Acad. Sci. USA 71 (1974) 1342-1346
    • (1974) Proc. Natl. Acad. Sci. USA , vol.71 , pp. 1342-1346
    • Shine, J.1    Dalgarno, L.2
  • 28
    • 0011343769 scopus 로고
    • How ribosomes select initiator regions in mRNA: base pair formation between the 3′ terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli
    • Steitz J.A., and Jakes K. How ribosomes select initiator regions in mRNA: base pair formation between the 3′ terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli. Proc. Natl. Acad. Sci. USA 72 (1975) 4734-4738
    • (1975) Proc. Natl. Acad. Sci. USA , vol.72 , pp. 4734-4738
    • Steitz, J.A.1    Jakes, K.2
  • 29
    • 0020709956 scopus 로고
    • Effect of Escherichia coli initiation factors on the kinetics of N-Acphe-tRNAPhe binding to 30S ribosomal subunits. A fluorescence stopped-flow study
    • Wintermeyer W., and Gualerzi C. Effect of Escherichia coli initiation factors on the kinetics of N-Acphe-tRNAPhe binding to 30S ribosomal subunits. A fluorescence stopped-flow study. Biochemistry 22 (1983) 690-694
    • (1983) Biochemistry , vol.22 , pp. 690-694
    • Wintermeyer, W.1    Gualerzi, C.2


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