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Volumn 271, Issue 19, 2004, Pages 3888-3896

Specific interaction between the classical swine fever virus NS5B protein and the viral genome

Author keywords

3 UTR; CSFV; RdRp; Replication; RNA synthesis

Indexed keywords

NUCLEOTIDE; PROTEIN NS5B; RNA; RNA DIRECTED RNA POLYMERASE; UNCLASSIFIED DRUG; VIRUS PROTEIN;

EID: 4944265553     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1432-1033.2004.04325.x     Document Type: Article
Times cited : (30)

References (42)
  • 1
    • 0032864837 scopus 로고    scopus 로고
    • Cytopathogenic and noncytopathogenic RNA replicons of classical swine fever virus
    • Moser, C., Stettler, P., Trutschin, J.D. & Hofmann, M.A. (1999) Cytopathogenic and noncytopathogenic RNA replicons of classical swine fever virus. J. Virol. 73, 7784-7794.
    • (1999) J. Virol. , vol.73 , pp. 7784-7794
    • Moser, C.1    Stettler, P.2    Trutschin, J.D.3    Hofmann, M.A.4
  • 2
    • 0031888265 scopus 로고    scopus 로고
    • Characterization of an autonomous subgenomic pestivirus RNA replicon
    • Behrens, S.E., Grassmann, C.W., Thiel, H.J., Meyers, G. & Tautz, N. (1998) Characterization of an autonomous subgenomic pestivirus RNA replicon. J. Virol. 72, 2364-2372.
    • (1998) J. Virol. , vol.72 , pp. 2364-2372
    • Behrens, S.E.1    Grassmann, C.W.2    Thiel, H.J.3    Meyers, G.4    Tautz, N.5
  • 3
    • 0032958430 scopus 로고    scopus 로고
    • Sequence and structural elements at the 3′ terminus of bovine viral diarrhea virus genomic RNA: Functional role during RNA replication
    • Yu, H., Grassmann, C.W. & Behrens, S.E. (1999) Sequence and structural elements at the 3′ terminus of bovine viral diarrhea virus genomic RNA: functional role during RNA replication. J. Virol. 73, 3638-3648.
    • (1999) J. Virol. , vol.73 , pp. 3638-3648
    • Yu, H.1    Grassmann, C.W.2    Behrens, S.E.3
  • 4
    • 0029825147 scopus 로고    scopus 로고
    • Characterization of RNA synthesis during a one-step growth curve and of the replication mechanism of bovine viral diarrhea virus
    • Gong, Y., Trowbridge, R., Macnaughton, T.B., Westaway, E.G., Shannon, A.D. & Gowans, E.J. (1996) Characterization of RNA synthesis during a one-step growth curve and of the replication mechanism of bovine viral diarrhea virus. J. Gen. Virol. 77, 2729-2736.
    • (1996) J. Gen. Virol. , vol.77 , pp. 2729-2736
    • Gong, Y.1    Trowbridge, R.2    Macnaughton, T.B.3    Westaway, E.G.4    Shannon, A.D.5    Gowans, E.J.6
  • 5
    • 0036241453 scopus 로고    scopus 로고
    • Pestivirus internal ribosome entry site (IRES) structure and function: Elements in the 5′ untranslated region important for IRES function
    • Fletcher, S.P. & Jackson, R.J. (2002) Pestivirus internal ribosome entry site (IRES) structure and function: Elements in the 5′ untranslated region important for IRES function. J. Virol. 76, 5024-5033.
    • (2002) J. Virol. , vol.76 , pp. 5024-5033
    • Fletcher, S.P.1    Jackson, R.J.2
  • 6
    • 0028236409 scopus 로고
    • Infectious transcripts and cDNA clones of RNA viruses
    • Boyer, J.C. & Haenni, A.L. (1994) Infectious transcripts and cDNA clones of RNA viruses. Virology 198, 415-426.
    • (1994) Virology , vol.198 , pp. 415-426
    • Boyer, J.C.1    Haenni, A.L.2
  • 7
    • 0042831283 scopus 로고    scopus 로고
    • Characterization of RNA-dependent RNA polymerase activity of CSFV NS5B proteins expressed in Escherichia coli
    • Xiao, M., Wang, Y., Chen, J. & Li, B. (2003) Characterization of RNA-dependent RNA polymerase activity of CSFV NS5B proteins expressed in Escherichia coli. Virus Genes 7, 67-74.
    • (2003) Virus Genes , vol.7 , pp. 67-74
    • Xiao, M.1    Wang, Y.2    Chen, J.3    Li, B.4
  • 8
    • 0033574540 scopus 로고    scopus 로고
    • Selective stimulation of hepatitis C virus and pestivirus NS5B RNA polymerase activity by GTP
    • Lohmann, V., Overton, H. & Bartenschlager, R. (1999) Selective stimulation of hepatitis C virus and pestivirus NS5B RNA polymerase activity by GTP. J. Biol. Chem. 274, 10807-10815.
    • (1999) J. Biol. Chem. , vol.274 , pp. 10807-10815
    • Lohmann, V.1    Overton, H.2    Bartenschlager, R.3
  • 9
    • 3543021296 scopus 로고    scopus 로고
    • RNA-dependent RNA polymerase activity of NS5B proteins expressed in pestiviral host cells
    • Xiao, M., Chen, J. & Li, B. (2003) RNA-dependent RNA polymerase activity of NS5B proteins expressed in pestiviral host cells. Acta Virol. 47, 17-26.
    • (2003) Acta Virol. , vol.47 , pp. 17-26
    • Xiao, M.1    Chen, J.2    Li, B.3
  • 10
    • 0032882393 scopus 로고    scopus 로고
    • The RNA-dependent RNA polymerase of different members of the family Flaviviridae exhibits similar properties in vitro
    • Steffen, S., Thiel, H.J. & Behrens, S.E. (1999) The RNA-dependent RNA polymerase of different members of the family Flaviviridae exhibits similar properties in vitro. J. Gen. Virol. 80, 2583-2590.
    • (1999) J. Gen. Virol. , vol.80 , pp. 2583-2590
    • Steffen, S.1    Thiel, H.J.2    Behrens, S.E.3
  • 11
    • 0036375705 scopus 로고    scopus 로고
    • Classical swine fever virus NS5B-GFP fusion possesses an RNA-dependent RNA polymerase activity
    • Xiao, M., Zhang, C.Y., Pan, Z.S., Wu, H.X. & Guo, J.Q. (2002) Classical swine fever virus NS5B-GFP fusion possesses an RNA-dependent RNA polymerase activity. Arch. Virol. 147, 1779-1787.
    • (2002) Arch. Virol. , vol.147 , pp. 1779-1787
    • Xiao, M.1    Zhang, C.Y.2    Pan, Z.S.3    Wu, H.X.4    Guo, J.Q.5
  • 12
    • 0031686765 scopus 로고    scopus 로고
    • Identification and characterization of an RNA-dependent RNA polymerase activity within the nonstructural protein 5B region of bovine viral diarrhea virus
    • Zhong, W., Gutshall, L.L. & Del Vecchio, A.M. (1998) Identification and characterization of an RNA-dependent RNA polymerase activity within the nonstructural protein 5B region of bovine viral diarrhea virus. J. Virol. 72, 9365-9369.
    • (1998) J. Virol. , vol.72 , pp. 9365-9369
    • Zhong, W.1    Gutshall, L.L.2    Del Vecchio, A.M.3
  • 14
    • 0030051777 scopus 로고    scopus 로고
    • Identification and Properties of the RNA-dependent RNA polymerase of hepatitis C virus
    • Behrens, S.E., Tomei, L. & Francesco, R.D. (1996) Identification and Properties of the RNA-dependent RNA polymerase of hepatitis C virus. EMBO J. 15, 12-22.
    • (1996) EMBO J. , vol.15 , pp. 12-22
    • Behrens, S.E.1    Tomei, L.2    Francesco, R.D.3
  • 15
    • 1842289764 scopus 로고    scopus 로고
    • Biochemical Properties of hepatitis C virus NS5B RNA-dependent RNA polymerase and Identification of amino acid sequence motifs essential for enzymatic activity
    • Lohmann, V., Körner, F., Herian, U. & Bartenschlager, R. (1997) Biochemical Properties of hepatitis C virus NS5B RNA-dependent RNA polymerase and Identification of amino acid sequence motifs essential for enzymatic activity. J. Virol. 71, 8416-8428.
    • (1997) J. Virol. , vol.71 , pp. 8416-8428
    • Lohmann, V.1    Körner, F.2    Herian, U.3    Bartenschlager, R.4
  • 16
    • 0032902564 scopus 로고    scopus 로고
    • Characterization of soluble hepatitis C virus RNA-dependent RNA polymerase expressed in Escherichia coli
    • Ferrari, E., Wright-Minogue, J., Fang, J.W.S., Barrudy, B.M., Lau, J.Y.N. & Hong, Z. (1999) Characterization of soluble hepatitis C virus RNA-dependent RNA polymerase expressed in Escherichia coli. J. Virol. 73, 1649-1654.
    • (1999) J. Virol. , vol.73 , pp. 1649-1654
    • Ferrari, E.1    Wright-Minogue, J.2    Fang, J.W.S.3    Barrudy, B.M.4    Lau, J.Y.N.5    Hong, Z.6
  • 17
    • 0032816079 scopus 로고    scopus 로고
    • A recombinant hepatitis C virus RNA-dependent RNA polymerase capable of copying the full-length viral RNA
    • Oh, J.-W., Ito, T. & Lai, M.M. (1999) A recombinant hepatitis C virus RNA-dependent RNA polymerase capable of copying the full-length viral RNA. J. Virol. 73, 7694-7702.
    • (1999) J. Virol. , vol.73 , pp. 7694-7702
    • Oh, J.-W.1    Ito, T.2    Lai, M.M.3
  • 18
    • 0346249755 scopus 로고    scopus 로고
    • De novo RNA synthesis by a recombinant classical swine fever virus RNA-dependent RNA polymerase
    • Yi, G.H., Zhang, C.Y., Cao, S., Wu, H.X. & Wang, Y. (2003) De novo RNA synthesis by a recombinant classical swine fever virus RNA-dependent RNA polymerase. Eur. J. Biochem. 270, 4952-4961.
    • (2003) Eur. J. Biochem. , vol.270 , pp. 4952-4961
    • Yi, G.H.1    Zhang, C.Y.2    Cao, S.3    Wu, H.X.4    Wang, Y.5
  • 19
    • 0033948907 scopus 로고    scopus 로고
    • De novo initiation of RNA synthesis by hepatitis C virus non structural protein 5B polymerase
    • Zhong, W., Uss, A.S., Ferrari, E., Lau, J.Y.N. & Hong, Z. (2000) De novo initiation of RNA synthesis by hepatitis C virus non structural protein 5B polymerase. J. Virol. 74, 2017-2022.
    • (2000) J. Virol. , vol.74 , pp. 2017-2022
    • Zhong, W.1    Uss, A.S.2    Ferrari, E.3    Lau, J.Y.N.4    Hong, Z.5
  • 20
    • 0036893141 scopus 로고    scopus 로고
    • Mechanism of de novo initiation by the hepatitis C virus RNA-Dependent RNA plymerase: Role of divalent metals
    • Ranjith-Kumar, C.T., Kim, Y.C., Gutshall, L., Silverman, C., Khandekar, S., Sarisky, R.T. & Kao, C.C. (2002) Mechanism of de novo initiation by the hepatitis C virus RNA-Dependent RNA plymerase: Role of divalent metals. J. Virol. 76, 12513-12525.
    • (2002) J. Virol. , vol.76 , pp. 12513-12525
    • Ranjith-Kumar, C.T.1    Kim, Y.C.2    Gutshall, L.3    Silverman, C.4    Khandekar, S.5    Sarisky, R.T.6    Kao, C.C.7
  • 21
    • 0033524332 scopus 로고    scopus 로고
    • De novo initiation of RNA synthesis by a recombinant flaviridae RNA-depentent RNA polymerase
    • Kao, C.C., Del Vecchio, A.M. & Zhong, W. (1999) De novo initiation of RNA synthesis by a recombinant flaviridae RNA-depentent RNA polymerase. Virology 253, 1-7.
    • (1999) Virology , vol.253 , pp. 1-7
    • Kao, C.C.1    Del Vecchio, A.M.2    Zhong, W.3
  • 23
    • 0036631865 scopus 로고    scopus 로고
    • Selection of 3′-template bases and initiating nucleotides by hepatitis C virus NS5B RNA-dependent RNA polymerase
    • Shim, J.H., Larson, G., Wu, J.Z. & Hong, Z. (2002) Selection of 3′-template bases and initiating nucleotides by hepatitis C virus NS5B RNA-dependent RNA polymerase. J. Virol. 76, 7030-7039.
    • (2002) J. Virol. , vol.76 , pp. 7030-7039
    • Shim, J.H.1    Larson, G.2    Wu, J.Z.3    Hong, Z.4
  • 24
    • 0036892593 scopus 로고    scopus 로고
    • Requirements for de novo initiation of RNA synthesis by recombinant flaviviral RNA-dependent RNA polymerases
    • Ranjith-Kumar, C.T., Gutshall, L., Kim, M.J., Sarisky, R.T. & Kao, C.C. (2002) Requirements for de novo initiation of RNA synthesis by recombinant flaviviral RNA-dependent RNA polymerases. J. Virol. 76, 12526-12536.
    • (2002) J. Virol. , vol.76 , pp. 12526-12536
    • Ranjith-Kumar, C.T.1    Gutshall, L.2    Kim, M.J.3    Sarisky, R.T.4    Kao, C.C.5
  • 25
    • 0034625351 scopus 로고    scopus 로고
    • Template requirement and initiation site selection by hepatitis C virus polymerase on minimal viral template
    • Oh, J.-W., Sheu, G.-T. & Lai, M.M. (2000) Template requirement and initiation site selection by hepatitis C virus polymerase on minimal viral template. J. Biol. Chem. 275, 17710-17717.
    • (2000) J. Biol. Chem. , vol.275 , pp. 17710-17717
    • Oh, J.-W.1    Sheu, G.-T.2    Lai, M.M.3
  • 26
    • 0035166768 scopus 로고    scopus 로고
    • HCV RNA-dependent RNA polymerases replicates in vitro the 3′ terminal region of the minus-strand viral RNA more efficiently than the 3′ terminal region of the plus-strand RNA
    • Reigadas, S., Ventura, M., Sarih-Cottin, L., Castroviejo, M., Litvak, S. & Astier-Gin, T. (2001) HCV RNA-dependent RNA polymerases replicates in vitro the 3′ terminal region of the minus-strand viral RNA more efficiently than the 3′ terminal region of the plus-strand RNA. Eur. J. Biochem. 268, 5857-5867.
    • (2001) Eur. J. Biochem. , vol.268 , pp. 5857-5867
    • Reigadas, S.1    Ventura, M.2    Sarih-Cottin, L.3    Castroviejo, M.4    Litvak, S.5    Astier-Gin, T.6
  • 27
    • 0036108666 scopus 로고    scopus 로고
    • Prediction of recognition sites of classical swine fever virus genomic replication with information analysis
    • Xiao, M., Zhi, Z.Z., Jueping, L. & Zhang, C.Y. (2002) Prediction of recognition sites of classical swine fever virus genomic replication with information analysis. Mol. Biol. 36, 34-43.
    • (2002) Mol. Biol. , vol.36 , pp. 34-43
    • Xiao, M.1    Zhi, Z.Z.2    Jueping, L.3    Zhang, C.Y.4
  • 28
    • 0034865496 scopus 로고    scopus 로고
    • Attenuated lapinized Chinese strain of classical swine fever virus: Complete nucleotide sequence and character of 3′-noncoding region
    • Wu, H.X., Wang, J.F., Zhang, C.Y., Fu, L.Z., Pan, Z.S., Wang, N., Zhang, P.W. & Zhao, W.G. (2001) Attenuated lapinized Chinese strain of classical swine fever virus: complete nucleotide sequence and character of 3′-noncoding region. Virus Genes 23, 69-76.
    • (2001) Virus Genes , vol.23 , pp. 69-76
    • Wu, H.X.1    Wang, J.F.2    Zhang, C.Y.3    Fu, L.Z.4    Pan, Z.S.5    Wang, N.6    Zhang, P.W.7    Zhao, W.G.8
  • 29
    • 0034835720 scopus 로고    scopus 로고
    • Qualitative, quantitative and structural analysis of non-coding regions of classical swine fever virus genome
    • Xiao, M., Zhi, Z.Z. & Zhang, C.Y. (2001) Qualitative, quantitative and structural analysis of non-coding regions of classical swine fever virus genome. Chinese Sci. Bull. 46, 1251-1257.
    • (2001) Chinese Sci. Bull. , vol.46 , pp. 1251-1257
    • Xiao, M.1    Zhi, Z.Z.2    Zhang, C.Y.3
  • 30
    • 0034468107 scopus 로고    scopus 로고
    • Template requirements for RNA synthesis by a recombinant hepatitis C virus RNA-dependent RNA polymerase
    • Kao, C.C., Yang, X., Kline, A., Wang, Q.M., Barket, D. & Heinz, B.A. (2000) Template requirements for RNA synthesis by a recombinant hepatitis C virus RNA-dependent RNA polymerase. J. Virol. 74, 11121-11128.
    • (2000) J. Virol. , vol.74 , pp. 11121-11128
    • Kao, C.C.1    Yang, X.2    Kline, A.3    Wang, Q.M.4    Barket, D.5    Heinz, B.A.6
  • 31
    • 0034881065 scopus 로고    scopus 로고
    • Terminal nucleotidyl transferase activity of recombinant Flaviviridae RNA-dependent RNA plymerases: Implication for viral RNA synthesis
    • Ranjith-Kumar, C.T., Gajewski, J., Gutshall, L., Maley, D., Sarisky, R.T. & Kao, C.C. (2001) Terminal nucleotidyl transferase activity of recombinant Flaviviridae RNA-dependent RNA plymerases: Implication for viral RNA synthesis. J. Virol. 75, 8615-8623.
    • (2001) J. Virol. , vol.75 , pp. 8615-8623
    • Ranjith-Kumar, C.T.1    Gajewski, J.2    Gutshall, L.3    Maley, D.4    Sarisky, R.T.5    Kao, C.C.6
  • 32
    • 0032798689 scopus 로고    scopus 로고
    • Specific interaction between the hepatitis C virus NS5B RNA polymerase and the 3′ end of the viral RNA
    • Cheng, J.C., Chang, M.F. & Chang, S.C. (1999) Specific interaction between the hepatitis C virus NS5B RNA polymerase and the 3′ end of the viral RNA. J. Virol. 73, 7044-7049.
    • (1999) J. Virol. , vol.73 , pp. 7044-7049
    • Cheng, J.C.1    Chang, M.F.2    Chang, S.C.3
  • 34
    • 0028904286 scopus 로고
    • Localization of binding site for encephalomyocarditis virus RNA polymerase in the 3′-noncoding region of the viral RNA
    • Cui, T. & Porter, A.G. (1995) Localization of binding site for encephalomyocarditis virus RNA polymerase in the 3′-noncoding region of the viral RNA. Nucleic Acids Res. 23, 377-382.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 377-382
    • Cui, T.1    Porter, A.G.2
  • 35
    • 0027501562 scopus 로고
    • Binding of encephalomyocarditis virus RNA polymerase to the 3′-noncoding region of the viral RNA is specific and requires the 3′-poly(A) tail
    • Cui, T., Sankar, S. & Porter, A.G. (1993) Binding of encephalomyocarditis virus RNA polymerase to the 3′-noncoding region of the viral RNA is specific and requires the 3′-poly(A) tail. J. Biol. Chem. 268, 26093-26098.
    • (1993) J. Biol. Chem. , vol.268 , pp. 26093-26098
    • Cui, T.1    Sankar, S.2    Porter, A.G.3
  • 36
    • 0035138086 scopus 로고    scopus 로고
    • Specific interaction of hepatitis C virus protease/helicase NS3 with the 3′-terminal sequences of viral positive- and negative-strand RNA
    • Banerjee, R. & Dasgupta, A. (2001) Specific interaction of hepatitis C virus protease/helicase NS3 with the 3′-terminal sequences of viral positive- and negative-strand RNA. J. Virol. 75, 1708-1721.
    • (2001) J. Virol. , vol.75 , pp. 1708-1721
    • Banerjee, R.1    Dasgupta, A.2
  • 37
    • 0033559870 scopus 로고    scopus 로고
    • hnRNP C and polypyrimidine tract-binding protein specifically interact with the pyimidine-rich region within the 3′ NTR of the HCV genome
    • Gontarek, R.R., Gutshall, L.L., Herold, K.M., Tsai, J., Sathe, G.M., Mao, J., Prescott, C. & Delvcchio, A.M. (1999) hnRNP C and polypyrimidine tract-binding protein specifically interact with the pyimidine-rich region within the 3′ NTR of the HCV genome. Nucleic Acids Res. 27, 1457-1463.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1457-1463
    • Gontarek, R.R.1    Gutshall, L.L.2    Herold, K.M.3    Tsai, J.4    Sathe, G.M.5    Mao, J.6    Prescott, C.7    Delvcchio, A.M.8
  • 38
    • 0035152913 scopus 로고    scopus 로고
    • Hepatitis C virus 3′ X region interacts with human ribosomal protein
    • Wood, J., Frederickson, R.M., Field, S. & Patel, A.H. (2001) Hepatitis C virus 3′ X region interacts with human ribosomal protein. J. Virol. 75, 1348-1358.
    • (2001) J. Virol. , vol.75 , pp. 1348-1358
    • Wood, J.1    Frederickson, R.M.2    Field, S.3    Patel, A.H.4
  • 39
    • 0029859576 scopus 로고    scopus 로고
    • RNA replication by Qβ replicase: A working model
    • Brown, D. & Gold, L. (1996) RNA replication by Qβ replicase: a working model. Proc. Natl Acad. Sci. USA 93, 11558-11562.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 11558-11562
    • Brown, D.1    Gold, L.2
  • 40
    • 0031969648 scopus 로고    scopus 로고
    • Minimal template requirements for initiation of minus-strand synthesis in vitro by the RNA-dependent RNA polymerase of turnip yellow mosaic virus
    • Deiman, B.A.L.M., Koenen, A.K., Verlaan, P.W.G. & Pleiji, C.W.A. (1998) Minimal template requirements for initiation of minus-strand synthesis in vitro by the RNA-dependent RNA polymerase of turnip yellow mosaic virus. J. Virol. 72, 3965-3972.
    • (1998) J. Virol. , vol.72 , pp. 3965-3972
    • Deiman, B.A.L.M.1    Koenen, A.K.2    Verlaan, P.W.G.3    Pleiji, C.W.A.4
  • 41
    • 0027229229 scopus 로고
    • Biochemical and genetic evidence for a pseudoknot structure at the terminus of the poliovirus RNA genome and its role in viral amplification
    • Jacobson, S.J., Konings, D.A.M. & Sarnow, P. (1993) Biochemical and genetic evidence for a pseudoknot structure at the terminus of the poliovirus RNA genome and its role in viral amplification. J. Virol. 67, 2961-2971.
    • (1993) J. Virol. , vol.67 , pp. 2961-2971
    • Jacobson, S.J.1    Konings, D.A.M.2    Sarnow, P.3
  • 42
    • 0028786430 scopus 로고
    • Requirement of a-3′-terminal stem-loop in in vitro transcription by an RNA-dependent RNA polymerase
    • Song, C. & Simon, A.E. (1995) Requirement of a-3′-terminal stem-loop in in vitro transcription by an RNA-dependent RNA polymerase. J. Mol. Biol. 254, 6-14.
    • (1995) J. Mol. Biol. , vol.254 , pp. 6-14
    • Song, C.1    Simon, A.E.2


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