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Volumn 62, Issue 7, 2008, Pages 1547-1554

Defined order of evolutionary adaptations: Experimental evidence

Author keywords

Evolutionary adaptation; Evolutionary path; Experimental evolution; Population dynamics

Indexed keywords

LACTOSE;

EID: 47349124794     PISSN: 00143820     EISSN: 15585646     Source Type: Journal    
DOI: 10.1111/j.1558-5646.2008.00397.x     Document Type: Article
Times cited : (30)

References (40)
  • 2
    • 21644441288 scopus 로고    scopus 로고
    • Long-term monitoring of bacteria undergoing programmed population control in a microchemostat
    • and
    • Balagadde, F. K., L. You, C. L. Hansen, F. H. Arnold, and S. R. Quake. 2005. Long-term monitoring of bacteria undergoing programmed population control in a microchemostat. Science 309 : 137 140.
    • (2005) Science , vol.309 , pp. 137-140
    • Balagadde, F.K.1    You, L.2    Hansen, C.L.3    Arnold, F.H.4    Quake, S.R.5
  • 3
    • 84987341300 scopus 로고
    • Interaction of sodium nitrite, oxygen and pH on growth of Staphylococcus aurenus
    • and
    • Buchanan, R. L., and M. Solberg. 1972. Interaction of sodium nitrite, oxygen and pH on growth of Staphylococcus aurenus. J. Food Sci. 37 : 81 85.
    • (1972) J. Food Sci. , vol.37 , pp. 81-85
    • Buchanan, R.L.1    Solberg, M.2
  • 4
    • 0037743679 scopus 로고    scopus 로고
    • Convergent evolution of gene circuits
    • and
    • Conant, G. C., and A. Wagner. 2003. Convergent evolution of gene circuits. Nat Genet 34 : 264 266.
    • (2003) Nat Genet , vol.34 , pp. 264-266
    • Conant, G.C.1    Wagner, A.2
  • 6
    • 0037417962 scopus 로고    scopus 로고
    • Parallel changes in gene expression after 20,000 generations of evolution in Escherichia coli
    • and
    • Cooper, T. F., D. E. Rozen, and R. E. Lenski. 2003. Parallel changes in gene expression after 20,000 generations of evolution in Escherichia coli. Proc. Natl. Acad. Sci. USA 100 : 1072 1077.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 1072-1077
    • Cooper, T.F.1    Rozen, D.E.2    Lenski, R.E.3
  • 7
    • 0030951186 scopus 로고    scopus 로고
    • Molecular evolution of an arsenate detoxification pathway by DNA shuffling
    • and
    • Crameri, A., G. Dawes, E. Rodriguez, Jr., S. Silver, and W. P. Stemmer. 1997. Molecular evolution of an arsenate detoxification pathway by DNA shuffling. Nat. Biotechnol. 15 : 436 438.
    • (1997) Nat. Biotechnol. , vol.15 , pp. 436-438
    • Crameri, A.1    Dawes, G.2    Rodriguez Jr., E.3    Silver, S.4    Stemmer, W.P.5
  • 8
    • 15544376421 scopus 로고    scopus 로고
    • Long-term experimental evolution in Escherichia coli. XII. DNA topology as a key target of selection
    • and
    • Crozat, E., N. Philippe, R. E. Lenski, J. Geiselmann, and D. Schneider. 2005. Long-term experimental evolution in Escherichia coli. XII. DNA topology as a key target of selection. Genetics 169 : 523 532.
    • (2005) Genetics , vol.169 , pp. 523-532
    • Crozat, E.1    Philippe, N.2    Lenski, R.E.3    Geiselmann, J.4    Schneider, D.5
  • 9
    • 23144432213 scopus 로고    scopus 로고
    • Optimality and evolutionary tuning of the expression level of a protein
    • and
    • Dekel, E., and U. Alon. 2005. Optimality and evolutionary tuning of the expression level of a protein. Nature 436 : 588 592.
    • (2005) Nature , vol.436 , pp. 588-592
    • Dekel, E.1    Alon, U.2
  • 10
    • 33847256353 scopus 로고    scopus 로고
    • The speed of evolution and maintenance of variation in asexual populations
    • and
    • Desai, M. M., D. S. Fisher, and A. W. Murray. 2007. The speed of evolution and maintenance of variation in asexual populations. Curr. Biol. 17 : 385 394.
    • (2007) Curr. Biol. , vol.17 , pp. 385-394
    • Desai, M.M.1    Fisher, D.S.2    Murray, A.W.3
  • 11
    • 0030017289 scopus 로고    scopus 로고
    • Punctuated evolution caused by selection of rare beneficial mutations
    • and
    • Elena, S. F., V. S. Cooper, and R. E. Lenski. 1996. Punctuated evolution caused by selection of rare beneficial mutations. Science 272 : 1802 1804.
    • (1996) Science , vol.272 , pp. 1802-1804
    • Elena, S.F.1    Cooper, V.S.2    Lenski, R.E.3
  • 13
    • 2542583245 scopus 로고    scopus 로고
    • The fate of competing beneficial mutations in an asexual population
    • and
    • Gerrish, P. J., and R. E. Lenski. 1998. The fate of competing beneficial mutations in an asexual population. Genetica 102-103 : 127 144.
    • (1998) Genetica , vol.102-103 , pp. 127-144
    • Gerrish, P.J.1    Lenski, R.E.2
  • 15
    • 0021697065 scopus 로고
    • The population genetics of Escherichia coli
    • and
    • Hartl, D. L., and D. E. Dykhuizen. 1984. The population genetics of Escherichia coli. Annu. Rev. Genet. 18 : 31 68.
    • (1984) Annu. Rev. Genet. , vol.18 , pp. 31-68
    • Hartl, D.L.1    Dykhuizen, D.E.2
  • 16
    • 0022410121 scopus 로고
    • Limits of adaptation: The evolution of selective neutrality
    • and
    • Hartl, D. L., D. E. Dykhuizen, and A. M. Dean. 1985. Limits of adaptation: the evolution of selective neutrality. Genetics 111 : 655 674.
    • (1985) Genetics , vol.111 , pp. 655-674
    • Hartl, D.L.1    Dykhuizen, D.E.2    Dean, A.M.3
  • 17
    • 34147180389 scopus 로고    scopus 로고
    • Analysis of genetic systems using experimental evolution and whole-genome sequencing
    • and
    • Hegreness, M., and R. Kishony. 2007. Analysis of genetic systems using experimental evolution and whole-genome sequencing. Genome. Biol. 8 : 201.
    • (2007) Genome. Biol. , vol.8 , pp. 201
    • Hegreness, M.1    Kishony, R.2
  • 18
    • 33645076253 scopus 로고    scopus 로고
    • An equivalence principle for the incorporation of favorable mutations in asexual populations
    • and
    • Hegreness, M., N. Shoresh, D. Hartl, and R. Kishony. 2006. An equivalence principle for the incorporation of favorable mutations in asexual populations. Science 311 : 1615 1617.
    • (2006) Science , vol.311 , pp. 1615-1617
    • Hegreness, M.1    Shoresh, N.2    Hartl, D.3    Kishony, R.4
  • 20
    • 0035695235 scopus 로고    scopus 로고
    • Profiles of adaptation in two similar viruses
    • and
    • Holder, K. K., and J. J. Bull. 2001. Profiles of adaptation in two similar viruses. Genetics 159 : 1393 1404.
    • (2001) Genetics , vol.159 , pp. 1393-1404
    • Holder, K.K.1    Bull, J.J.2
  • 21
    • 0037079023 scopus 로고    scopus 로고
    • Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth
    • and
    • Ibarra, R. U., J. S. Edwards, and B. O. Palsson. 2002. Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth. Nature 420 : 186 189.
    • (2002) Nature , vol.420 , pp. 186-189
    • Ibarra, R.U.1    Edwards, J.S.2    Palsson, B.O.3
  • 23
    • 0041853578 scopus 로고    scopus 로고
    • Environmental stresses can alleviate the average deleterious effect of mutations
    • and
    • Kishony, R., and S. Leibler. 2003. Environmental stresses can alleviate the average deleterious effect of mutations. J. Biol. 2 : 14.
    • (2003) J. Biol. , vol.2 , pp. 14
    • Kishony, R.1    Leibler, S.2
  • 24
    • 0028365256 scopus 로고
    • Dynamics of adaptation and diversification: A 10,000-generation experiment with bacterial populations
    • and
    • Lenski, R. E., and M. Travisano. 1994. Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations. Proc. Natl. Acad. Sci. USA 91 : 6808 6814.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 6808-6814
    • Lenski, R.E.1    Travisano, M.2
  • 25
    • 33845487715 scopus 로고    scopus 로고
    • Balancing robustness and evolvability
    • and
    • Lenski, R. E., J. E. Barrick, and C. Ofria. 2006. Balancing robustness and evolvability. PLoS Biol. 4 : e428.
    • (2006) PLoS Biol. , vol.4
    • Lenski, R.E.1    Barrick, J.E.2    Ofria, C.3
  • 27
    • 0001639179 scopus 로고
    • The growth of bacterial cultures
    • Monod, J. 1949. The growth of bacterial cultures. Annu. Rev. Microbiol. 3 : 371 394.
    • (1949) Annu. Rev. Microbiol. , vol.3 , pp. 371-394
    • Monod, J.1
  • 28
    • 0000714523 scopus 로고
    • Damage and depression in Escherichia coli resulting from growth at low temperatures
    • and
    • Ng, H., J. L. Ingraham, and A. G. Marr. 1962. Damage and depression in Escherichia coli resulting from growth at low temperatures. J. Bacteriol. 84 : 331 339.
    • (1962) J. Bacteriol. , vol.84 , pp. 331-339
    • Ng, H.1    Ingraham, J.L.2    Marr, A.G.3
  • 29
    • 0031714655 scopus 로고    scopus 로고
    • Evolution: The population genetics of adaptation: The distribution of factors fixed during adaptive evolution
    • Orr, H. A. 1998. Evolution: The population genetics of adaptation: the distribution of factors fixed during adaptive evolution. Society for the Study of Evolution 52 : 935.
    • (1998) Society for the Study of Evolution , vol.52 , pp. 935
    • Orr, H.A.1
  • 31
    • 13144257707 scopus 로고    scopus 로고
    • The genetic theory of adaptation: A brief history
    • Orr, H. A. 2005. The genetic theory of adaptation: a brief history. Nat. Rev. Genet. 6 : 119 127.
    • (2005) Nat. Rev. Genet. , vol.6 , pp. 119-127
    • Orr, H.A.1
  • 33
    • 33744942360 scopus 로고    scopus 로고
    • Evolutionary potential of a duplicated repressor-operator pair: Simulating pathways using mutation data
    • and
    • Poelwijk, F. J., D. J. Kiviet, and S. J. Tans. 2006. Evolutionary potential of a duplicated repressor-operator pair: simulating pathways using mutation data. PLoS Comput. Biol. 2 : e58.
    • (2006) PLoS Comput. Biol. , vol.2
    • Poelwijk, F.J.1    Kiviet, D.J.2    Tans, S.J.3
  • 34
    • 33846551980 scopus 로고    scopus 로고
    • Empirical fitness landscapes reveal accessible evolutionary paths
    • and
    • Poelwijk, F. J., D. J. Kiviet, D. M. Weinreich, and S. J. Tans. 2007. Empirical fitness landscapes reveal accessible evolutionary paths. Nature 445 : 383 386.
    • (2007) Nature , vol.445 , pp. 383-386
    • Poelwijk, F.J.1    Kiviet, D.J.2    Weinreich, D.M.3    Tans, S.J.4
  • 35
    • 0031767147 scopus 로고    scopus 로고
    • The effect of the growth environment on the lag phase of Listeria monocytogenes
    • and
    • Robinson, T. P., M. J. Ocio, A. Kaloti, and B. M. Mackey. 1998. The effect of the growth environment on the lag phase of Listeria monocytogenes. Int. J. Food Microbiol. 44 : 83 92.
    • (1998) Int. J. Food Microbiol. , vol.44 , pp. 83-92
    • Robinson, T.P.1    Ocio, M.J.2    Kaloti, A.3    MacKey, B.M.4
  • 37
    • 33747370046 scopus 로고    scopus 로고
    • High-resolution mutation mapping reveals parallel experimental evolution in yeast
    • and
    • Segre, A. V., A. W. Murray, and J. Y. Leu. 2006. High-resolution mutation mapping reveals parallel experimental evolution in yeast. PLoS Biol. 4 : e256.
    • (2006) PLoS Biol. , vol.4
    • Segre, A.V.1    Murray, A.W.2    Leu, J.Y.3
  • 39
    • 33645666942 scopus 로고    scopus 로고
    • Darwinian evolution can follow only very few mutational paths to fitter proteins
    • and
    • Weinreich, D. M., N. F. Delaney, M. A. Depristo, and D. L. Hartl. 2006. Darwinian evolution can follow only very few mutational paths to fitter proteins. Science 312 : 111 114.
    • (2006) Science , vol.312 , pp. 111-114
    • Weinreich, D.M.1    Delaney, N.F.2    Depristo, M.A.3    Hartl, D.L.4
  • 40
    • 0026615484 scopus 로고
    • Comparison of definitions of the lag phase and the exponential phase in bacterial growth
    • and
    • Zwietering, M. H., F. M. Rombouts, and K. van't Riet. 1992. Comparison of definitions of the lag phase and the exponential phase in bacterial growth. J. Appl. Bacteriol. 72 : 139 145.
    • (1992) J. Appl. Bacteriol. , vol.72 , pp. 139-145
    • Zwietering, M.H.1    Rombouts, F.M.2    Van'T Riet, K.3


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