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Volumn 3, Issue 2, 2008, Pages

A combination of genomic approaches reveals the role of FOXO1a in regulating an oxidative stress response pathway

Author keywords

[No Author keywords available]

Indexed keywords

REGULATOR PROTEIN; SMALL INTERFERING RNA; THIOREDOXIN; THIOREDOXIN INTERACTING PROTEIN; TRANSCRIPTION FACTOR FKHR; CARRIER PROTEIN; FORKHEAD TRANSCRIPTION FACTOR; FOXO1 PROTEIN, HUMAN; TXNIP PROTEIN, HUMAN;

EID: 45749107163     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0001670     Document Type: Article
Times cited : (43)

References (48)
  • 1
    • 0015070886 scopus 로고
    • Repetitive and non-repetitive DNA sequences and a speculation on the origins of evolutionary novelty
    • Britten RJ, Davidson EH (1971) Repetitive and non-repetitive DNA sequences and a speculation on the origins of evolutionary novelty. Q Rev Biol 46: 111-138.
    • (1971) Q Rev Biol , vol.46 , pp. 111-138
    • Britten, R.J.1    Davidson, E.H.2
  • 2
    • 0016669094 scopus 로고
    • Evolution at two levels in humans and chimpanzees
    • King MC, Wilson AC (1975) Evolution at two levels in humans and chimpanzees. Science 188: 107-116.
    • (1975) Science , vol.188 , pp. 107-116
    • King, M.C.1    Wilson, A.C.2
  • 3
    • 0037464547 scopus 로고    scopus 로고
    • Genetics and the making of Homo sapiens
    • Carroll SB (2003) Genetics and the making of Homo sapiens. Nature 422: 849-857.
    • (2003) Nature , vol.422 , pp. 849-857
    • Carroll, S.B.1
  • 4
    • 0035733752 scopus 로고    scopus 로고
    • The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster
    • Jin W, Riley RM, Wolfinger RD, White KP, Passador-Gurgel G, et al. (2001) The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster. Nat Genet 29: 389-393.
    • (2001) Nat Genet , vol.29 , pp. 389-393
    • Jin, W.1    Riley, R.M.2    Wolfinger, R.D.3    White, K.P.4    Passador-Gurgel, G.5
  • 5
    • 4444358439 scopus 로고    scopus 로고
    • Bmp4 and morphological variation of beaks in Darwin's finches
    • Abzbanov A, Protas M, Grant BR, Grant PR, Tabin CJ (2004) Bmp4 and morphological variation of beaks in Darwin's finches. Science 305: 1462-1465.
    • (2004) Science , vol.305 , pp. 1462-1465
    • Abzbanov, A.1    Protas, M.2    Grant, B.R.3    Grant, P.R.4    Tabin, C.J.5
  • 6
    • 1942455815 scopus 로고    scopus 로고
    • Genetic and developmental basis or evolutionary pelvic reduction in threespine sticklebacks
    • Shapiro MD, Marks ME, Peichel CL, Blackman BK, Nereng KS, et al. (2004) Genetic and developmental basis or evolutionary pelvic reduction in threespine sticklebacks. Nature 428: 717-723.
    • (2004) Nature , vol.428 , pp. 717-723
    • Shapiro, M.D.1    Marks, M.E.2    Peichel, C.L.3    Blackman, B.K.4    Nereng, K.S.5
  • 8
    • 19544379515 scopus 로고    scopus 로고
    • BRCAl mRNA expression levels as an indicator of chemoresistance in lung cancer
    • Taron M, Resell R, Felip E, Mendez P, Souglakos J, et al. (2004) BRCAl mRNA expression levels as an indicator of chemoresistance in lung cancer. Hum Mol Genet 13: 2443-2449.
    • (2004) Hum Mol Genet , vol.13 , pp. 2443-2449
    • Taron, M.1    Resell, R.2    Felip, E.3    Mendez, P.4    Souglakos, J.5
  • 9
    • 29144492108 scopus 로고    scopus 로고
    • Ancient and recent positive selection transformed opioid cis-regulation in humans
    • Rockman MV, Hahn MW, Soranzo N, Zimprich F, Goldstein DB, et al. (2005) Ancient and recent positive selection transformed opioid cis-regulation in humans. PLoS Biol 3: e387.
    • (2005) PLoS Biol , vol.3
    • Rockman, M.V.1    Hahn, M.W.2    Soranzo, N.3    Zimprich, F.4    Goldstein, D.B.5
  • 10
    • 0035933848 scopus 로고    scopus 로고
    • Functional analysis of the chimpanzee and human apo(a) promoter sequences: Identification of sequence variations responsible for elevated transcriptional activity in chimpanzee
    • Huby T, Dachet C, Lawn RM, Wickings J, Chapman MJ, et al. (2001) Functional analysis of the chimpanzee and human apo(a) promoter sequences: identification of sequence variations responsible for elevated transcriptional activity in chimpanzee. J Biol Chem 276: 22209-22214.
    • (2001) J Biol Chem , vol.276 , pp. 22209-22214
    • Huby, T.1    Dachet, C.2    Lawn, R.M.3    Wickings, J.4    Chapman, M.J.5
  • 11
    • 0345526412 scopus 로고    scopus 로고
    • Positive selection on a human-specific transcription factor binding site regulating IL4 expression
    • Rockman MV, Hahn MW, Soranzo N, Goldstein DB, Wray CA (2003) Positive selection on a human-specific transcription factor binding site regulating IL4 expression. Curr Biol 13: 2118-2123.
    • (2003) Curr Biol , vol.13 , pp. 2118-2123
    • Rockman, M.V.1    Hahn, M.W.2    Soranzo, N.3    Goldstein, D.B.4    Wray, C.A.5
  • 12
    • 33644855479 scopus 로고    scopus 로고
    • Expression profiling in primates reveals a rapid evolution of human transcription factors
    • Gilad Y, Oshlack A, Smyth GK, Speed TP, White KP (2006) Expression profiling in primates reveals a rapid evolution of human transcription factors. Nature 440: 242-245.
    • (2006) Nature , vol.440 , pp. 242-245
    • Gilad, Y.1    Oshlack, A.2    Smyth, G.K.3    Speed, T.P.4    White, K.P.5
  • 14
    • 0000862882 scopus 로고
    • life history variation in primates
    • Harvey PH, Clutton-Brack TH (1985) life history variation in primates. Evolution 39: 559-581.
    • (1985) Evolution , vol.39 , pp. 559-581
    • Harvey, P.H.1    Clutton-Brack, T.H.2
  • 16
    • 0030657540 scopus 로고    scopus 로고
    • daf-16: An HNF-3/forkhead family member that can function to double the life-span of Cacnorhabditis Elegans
    • Lin K, Dorman JB, Rodan A, Kenyon C (1997) daf-16: An HNF-3/forkhead family member that can function to double the life-span of Cacnorhabditis Elegans. Science 278: 1319-1322.
    • (1997) Science , vol.278 , pp. 1319-1322
    • Lin, K.1    Dorman, J.B.2    Rodan, A.3    Kenyon, C.4
  • 17
    • 0030659557 scopus 로고    scopus 로고
    • The Fork head transcription factor DAF-16 transduces insulin-like metabolic and longevity signals in C. elegans
    • Ogg S, Paradis S, Gottlieb S, Patterson GI, Lee L, et al. (1997) The Fork head transcription factor DAF-16 transduces insulin-like metabolic and longevity signals in C. elegans. Nature 389: 994-999.
    • (1997) Nature , vol.389 , pp. 994-999
    • Ogg, S.1    Paradis, S.2    Gottlieb, S.3    Patterson, G.I.4    Lee, L.5
  • 18
    • 3142749712 scopus 로고    scopus 로고
    • Long-lived Drosophila with overexpressed dFOXO in adult fat body
    • Giannakou ME, Goss M, Junger MA, Hafen E, Leevers SJ, et al. (2004) Long-lived Drosophila with overexpressed dFOXO in adult fat body. Science 305: 361.
    • (2004) Science , vol.305 , pp. 361
    • Giannakou, M.E.1    Goss, M.2    Junger, M.A.3    Hafen, E.4    Leevers, S.J.5
  • 19
    • 0037942739 scopus 로고    scopus 로고
    • Extended longevity in mice lacking the insulin receptor in adipose tissue
    • Bluher M, Kahn BB, Kahn CR (2003) Extended longevity in mice lacking the insulin receptor in adipose tissue. Science 299: 572-574.
    • (2003) Science , vol.299 , pp. 572-574
    • Bluher, M.1    Kahn, B.B.2    Kahn, C.R.3
  • 20
    • 0347664057 scopus 로고    scopus 로고
    • IGF-1 receptor regulates lifespan and resistance to oxidative stress in mice
    • Holzenberger M, Dupont J, Ducos B, Leneuve P, Geloen A, et al. (2003) IGF-1 receptor regulates lifespan and resistance to oxidative stress in mice. Nature 421: 182-187.
    • (2003) Nature , vol.421 , pp. 182-187
    • Holzenberger, M.1    Dupont, J.2    Ducos, B.3    Leneuve, P.4    Geloen, A.5
  • 21
    • 0036086818 scopus 로고    scopus 로고
    • Life span extension by reduction in growth hormone-insulin-like growth factor-1 axis in a transgenic rat model
    • Shimokawa I, Higami Y, Utsuyama M, Tuchiya T, Komatsu T, et al. (2002) Life span extension by reduction in growth hormone-insulin-like growth factor-1 axis in a transgenic rat model. Am J Pathol 160: 2259-2265.
    • (2002) Am J Pathol , vol.160 , pp. 2259-2265
    • Shimokawa, I.1    Higami, Y.2    Utsuyama, M.3    Tuchiya, T.4    Komatsu, T.5
  • 22
    • 0032782364 scopus 로고    scopus 로고
    • The daf-2 gene network for longevity regulates oxidative stress resistance and Mn-superoxide dismutase gene expression in Caenorhabditis clegans
    • Honda Y, Honda S (1999) The daf-2 gene network for longevity regulates oxidative stress resistance and Mn-superoxide dismutase gene expression in Caenorhabditis clegans. Faseb J 13: 1385-1393.
    • (1999) Faseb J , vol.13 , pp. 1385-1393
    • Honda, Y.1    Honda, S.2
  • 23
    • 0242539698 scopus 로고    scopus 로고
    • The Drosophila forkread transcription factor FCXO mediates the reduction in cell number associated with reduced insulin signaling
    • Junger MA, Rintelen F, Stocker H, Wasserman JD, Vegh M, et al. (2003) The Drosophila forkread transcription factor FCXO mediates the reduction in cell number associated with reduced insulin signaling. J Biol 2: 20.
    • (2003) J Biol , vol.2 , pp. 20
    • Junger, M.A.1    Rintelen, F.2    Stocker, H.3    Wasserman, J.D.4    Vegh, M.5
  • 24
    • 0037136563 scopus 로고    scopus 로고
    • Forkhead transcription factor FOXO3a protects quiescent cells from oxidative stress
    • Kops GJ, Dansen TB, Polderman PE, Saarloos I, Wirtz KW, et al. (2002) Forkhead transcription factor FOXO3a protects quiescent cells from oxidative stress. Nature 419: 316-321.
    • (2002) Nature , vol.419 , pp. 316-321
    • Kops, G.J.1    Dansen, T.B.2    Polderman, P.E.3    Saarloos, I.4    Wirtz, K.W.5
  • 25
    • 33846243745 scopus 로고    scopus 로고
    • An integrated view of oxidative stress in aging: Basic mechanisms, functional effects, and pathological considerations
    • Kregel KC, Zhang HJ (2007) An integrated view of oxidative stress in aging: basic mechanisms, functional effects, and pathological considerations. Am J Physiol Regul Integr Comp Physiol 292: R18-36.
    • (2007) Am J Physiol Regul Integr Comp Physiol , vol.292
    • Kregel, K.C.1    Zhang, H.J.2
  • 26
    • 21644470770 scopus 로고    scopus 로고
    • A forkhead in the road to longevity: The molecular basis of lifespan becomes clearer
    • Morris BJ (2005) A forkhead in the road to longevity: the molecular basis of lifespan becomes clearer. J Hypertens 23: 1285-1309.
    • (2005) J Hypertens , vol.23 , pp. 1285-1309
    • Morris, B.J.1
  • 27
    • 33751430460 scopus 로고    scopus 로고
    • The search for DAF-16/FOXO transcriptional targets: Approaches and discoveries
    • doi:10.1016/ j.exger.2006.06.040
    • Murphy CT (2006) The search for DAF-16/FOXO transcriptional targets: Approaches and discoveries. Experimental Gerontology doi:10.1016/ j.exger.2006.06.040.
    • (2006) Experimental Gerontology
    • Murphy, C.T.1
  • 28
    • 31744438846 scopus 로고    scopus 로고
    • Identification of direct DAF-16 targets controlling longevity, metabolism and diapause bv chromatin immunoprecipitation
    • Oh SW, Mukhopadhyay A, Dixit BL, Raha T, Green MR, et al. (2006) Identification of direct DAF-16 targets controlling longevity, metabolism and diapause bv chromatin immunoprecipitation. Nat Genet 38: 251-257.
    • (2006) Nat Genet , vol.38 , pp. 251-257
    • Oh, S.W.1    Mukhopadhyay, A.2    Dixit, B.L.3    Raha, T.4    Green, M.R.5
  • 29
    • 0036177862 scopus 로고    scopus 로고
    • Transcription factor haploinsufficiency: When half a loaf is not enough
    • Seidman JG, Seidman C (2002) Transcription factor haploinsufficiency: when half a loaf is not enough. J Clin Invest 109: 451-454.
    • (2002) J Clin Invest , vol.109 , pp. 451-454
    • Seidman, J.G.1    Seidman, C.2
  • 30
    • 22144459722 scopus 로고    scopus 로고
    • Prediction of cis-regulatory elements using binding site matrices-the successes, the failures and the reasons for both
    • Vavouri T, Elgar G (2005) Prediction of cis-regulatory elements using binding site matrices-the successes, the failures and the reasons for both. Curr Opin Genet Dev 15: 395-402.
    • (2005) Curr Opin Genet Dev , vol.15 , pp. 395-402
    • Vavouri, T.1    Elgar, G.2
  • 31
    • 0034598832 scopus 로고    scopus 로고
    • Evidence for stabilizing selection in a eukaryotic enhancer element
    • Ludwig MZ, Bergman C, Patel NH, Kreitman M (2000) Evidence for stabilizing selection in a eukaryotic enhancer element. Nature 403: 564-567.
    • (2000) Nature , vol.403 , pp. 564-567
    • Ludwig, M.Z.1    Bergman, C.2    Patel, N.H.3    Kreitman, M.4
  • 33
    • 0035986888 scopus 로고    scopus 로고
    • Evolution of transcription factor binding sites in Mammalian gene regulatory regions: Conservation and turnover
    • Dermitzakis ET, Clark AG (2002) Evolution of transcription factor binding sites in Mammalian gene regulatory regions: conservation and turnover. Mol Biol Evol 19: 1114-1121.
    • (2002) Mol Biol Evol , vol.19 , pp. 1114-1121
    • Dermitzakis, E.T.1    Clark, A.G.2
  • 34
    • 33746787216 scopus 로고    scopus 로고
    • The interaction of thioredoxin with Txnip. Evidence for formation of a mixed disulfiDe by disulfide exchange
    • Patwari P, Higgins LJ, Chutkow WA, Yoshioka J, Lee RT (2006) The interaction of thioredoxin with Txnip. Evidence for formation of a mixed disulfiDe by disulfide exchange. J Biol Chem 281: 21884-21891.
    • (2006) J Biol Chem , vol.281 , pp. 21884-21891
    • Patwari, P.1    Higgins, L.J.2    Chutkow, W.A.3    Yoshioka, J.4    Lee, R.T.5
  • 35
    • 0034658976 scopus 로고    scopus 로고
    • Vitamin D3 upregulated protein 1 mediates oxidative stress via suppressing the thioredoxin function
    • Junn E, Han SH, Im JY, Yang Y, Cho EW, et al. (2000) Vitamin D3 upregulated protein 1 mediates oxidative stress via suppressing the thioredoxin function. J Immunol 164: 6287-6295.
    • (2000) J Immunol , vol.164 , pp. 6287-6295
    • Junn, E.1    Han, S.H.2    Im, J.Y.3    Yang, Y.4    Cho, E.W.5
  • 36
    • 33748931319 scopus 로고    scopus 로고
    • Thioredoxin-binding protein-2 (TBP-2): Its potential roles in the aging process
    • Yoshida T. Kondo N, Oka S, Ahsan MK, Hara T, et al. (2006) Thioredoxin-binding protein-2 (TBP-2): its potential roles in the aging process. Biofactors 27: 77-51.
    • (2006) Biofactors , vol.27 , pp. 77-51
    • Yoshida, T.1    Kondo, N.2    Oka, S.3    Ahsan, M.K.4    Hara, T.5
  • 37
    • 29244455315 scopus 로고    scopus 로고
    • Thioredoxin is related to life span regulation and oxidative stress response in Caenorhabditis elegans
    • Jee C, Vanoaica L, Lee J, Park BJ, Ahnn J (2005) Thioredoxin is related to life span regulation and oxidative stress response in Caenorhabditis elegans. Genes Cells 10: 1203-1210.
    • (2005) Genes Cells , vol.10 , pp. 1203-1210
    • Jee, C.1    Vanoaica, L.2    Lee, J.3    Park, B.J.4    Ahnn, J.5
  • 38
    • 0036671827 scopus 로고    scopus 로고
    • Overexpression of human thioredoxin in transgenic mice controls oxidative stress and life span
    • Mitsui A, Hamuro J, Nakamura H, Kondo N, Hirabayashi Y, et al. (2002) Overexpression of human thioredoxin in transgenic mice controls oxidative stress and life span. Antioxid Redox Signal 4: 693-696.
    • (2002) Antioxid Redox Signal , vol.4 , pp. 693-696
    • Mitsui, A.1    Hamuro, J.2    Nakamura, H.3    Kondo, N.4    Hirabayashi, Y.5
  • 39
    • 0142182386 scopus 로고    scopus 로고
    • The role of thioredoxin in the aging process: Involvement of oxidative stress
    • Yoshida T, Oka S, Masutani H, Nakamura H, Yodoi J (2003) The role of thioredoxin in the aging process: involvement of oxidative stress. Antioxid Redox Signal 5: 563-570.
    • (2003) Antioxid Redox Signal , vol.5 , pp. 563-570
    • Yoshida, T.1    Oka, S.2    Masutani, H.3    Nakamura, H.4    Yodoi, J.5
  • 41
    • 32244449415 scopus 로고    scopus 로고
    • Oxidative stress profiling: Part I. Its potential importance in the optimization of human health
    • Cutler RG (2005) Oxidative stress profiling: part I. Its potential importance in the optimization of human health. Ann N Y Acad Sci 1055: 93-135.
    • (2005) Ann N Y Acad Sci , vol.1055 , pp. 93-135
    • Cutler, R.G.1
  • 43
    • 19844365733 scopus 로고    scopus 로고
    • Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles
    • Gilad Y, Rifkin SA, Bertone P, Gerstein M, White KP (2005) Multi-species microarrays reveal the effect of sequence divergence on gene expression profiles. Genome Res 15: 674-680.
    • (2005) Genome Res , vol.15 , pp. 674-680
    • Gilad, Y.1    Rifkin, S.A.2    Bertone, P.3    Gerstein, M.4    White, K.P.5
  • 44
    • 33644872577 scopus 로고    scopus 로고
    • Limma: Linear models for microarray data
    • Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W, eds, New York: Springer. pp
    • Smyth GK (2005) Limma: linear models for microarray data. In: Gentleman R, Carey V, Dudoit S, Irizarry R, Huber W, eds. Bioinformatics and Computational Biology Solutions using R and Bioconductor. New York: Springer. pp 397-420.
    • (2005) Bioinformatics and Computational Biology Solutions using R and Bioconductor , pp. 397-420
    • Smyth, G.K.1
  • 47
    • 0001677717 scopus 로고
    • Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing. Journad of the Royal Statistical
    • Benjamini Y, Hochberg Y (1995) Controlling the False Discovery Rate: a Practical and Powerful Approach to Multiple Testing. Journad of the Royal Statistical Society B 57: 289-300.
    • (1995) Society B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


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