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Volumn 47, Issue 3, 2008, Pages 992-1004

Phylogeography of the Pygmy Rain Frog (Pristimantis ridens) across the lowland wet forests of isthmian Central America

Author keywords

Central America; Cruentus group; Dispersal; Eleutherodactyline; Golfo Dulce; Mitochondrial DNA; Phylogeography; Range expansion; SOWH test

Indexed keywords

ANIMAL; ARTICLE; BIOLOGICAL MODEL; CENTRAL AMERICA; DNA SEQUENCE; FROGS AND TOADS; GENETIC VARIABILITY; GENETICS; GEOGRAPHY; HAPLOTYPE; PHYLOGENY; STATISTICAL MODEL; TIME; TREE; WETLAND;

EID: 44149128163     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2008.02.021     Document Type: Article
Times cited : (62)

References (108)
  • 1
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike H. A new look at the statistical model identification. Automatic Control, IEEE Trans. 19 (1974) 716-723
    • (1974) Automatic Control, IEEE Trans. , vol.19 , pp. 716-723
    • Akaike, H.1
  • 2
    • 0036909632 scopus 로고    scopus 로고
    • Estimating divergence times from molecular data on phylogenetic and population genetic timescales
    • Arbogast B.S., Edwards S.V., Wakeley J., Beerli P., and Slowinski J.B. Estimating divergence times from molecular data on phylogenetic and population genetic timescales. Annu. Rev. Ecol. Syst. 33 (2002) 707-740
    • (2002) Annu. Rev. Ecol. Syst. , vol.33 , pp. 707-740
    • Arbogast, B.S.1    Edwards, S.V.2    Wakeley, J.3    Beerli, P.4    Slowinski, J.B.5
  • 5
    • 28344439412 scopus 로고    scopus 로고
    • Conservation genetics of amphibians
    • Beebee T.J.C. Conservation genetics of amphibians. Heredity 95 (2005) 423-427
    • (2005) Heredity , vol.95 , pp. 423-427
    • Beebee, T.J.C.1
  • 6
    • 0001378105 scopus 로고
    • Molecular zoogeography of freshwater fishes in the southeastern United States
    • Bermingham E., and Avise J. Molecular zoogeography of freshwater fishes in the southeastern United States. Genetics 113 (1986) 939-965
    • (1986) Genetics , vol.113 , pp. 939-965
    • Bermingham, E.1    Avise, J.2
  • 7
    • 0027533515 scopus 로고
    • Rate variation of protein and mitochondrial DNA evolution as revealed by sea urchins separated by the Isthmus of Panama
    • Bermingham E., and Lessios H.A. Rate variation of protein and mitochondrial DNA evolution as revealed by sea urchins separated by the Isthmus of Panama. Proc. Natl. Acad. Sci. USA 90 (1993) 2734-2738
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 2734-2738
    • Bermingham, E.1    Lessios, H.A.2
  • 8
    • 13144276361 scopus 로고    scopus 로고
    • Comparative mtDNA phylogeography of Neotropical freshwater fishes: testing shared history to infer the evolutionary landscape of lower Central America
    • Bermingham E., and Martin A.P. Comparative mtDNA phylogeography of Neotropical freshwater fishes: testing shared history to infer the evolutionary landscape of lower Central America. Mol. Ecol. 7 (1998) 499-517
    • (1998) Mol. Ecol. , vol.7 , pp. 499-517
    • Bermingham, E.1    Martin, A.P.2
  • 9
    • 0036623259 scopus 로고    scopus 로고
    • Model misspecification and probabilistic tests of topology: evidence from empirical data sets
    • Buckley T.R. Model misspecification and probabilistic tests of topology: evidence from empirical data sets. Syst. Biol. 51 (2002) 509-523
    • (2002) Syst. Biol. , vol.51 , pp. 509-523
    • Buckley, T.R.1
  • 10
    • 36549076445 scopus 로고    scopus 로고
    • Amphibian DNA shows marked genetic structure and tracks Pleistocene climate change in northeastern Brazil
    • Carnaval A.C., and Bates J.M. Amphibian DNA shows marked genetic structure and tracks Pleistocene climate change in northeastern Brazil. Evolution 61 (2007) 2942-2957
    • (2007) Evolution , vol.61 , pp. 2942-2957
    • Carnaval, A.C.1    Bates, J.M.2
  • 11
    • 18744367198 scopus 로고    scopus 로고
    • Complex evolutionary history of a Neotropical lowland forest bird (Lepidothrix coronata) and its implications for historical hypotheses of the origin of Neotropical avian diversity
    • Cheviron Z.A., Hackett S.J., and Capparella A.P. Complex evolutionary history of a Neotropical lowland forest bird (Lepidothrix coronata) and its implications for historical hypotheses of the origin of Neotropical avian diversity. Mol. Phylogenet. Evol. 36 (2005) 338-357
    • (2005) Mol. Phylogenet. Evol. , vol.36 , pp. 338-357
    • Cheviron, Z.A.1    Hackett, S.J.2    Capparella, A.P.3
  • 12
    • 0033771358 scopus 로고    scopus 로고
    • TCS: a computer program to estimate gene genealogies
    • Clement M., Posada D., and Crandall K.A. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9 (2000) 1657-1659
    • (2000) Mol. Ecol. , vol.9 , pp. 1657-1659
    • Clement, M.1    Posada, D.2    Crandall, K.A.3
  • 13
    • 0001978128 scopus 로고    scopus 로고
    • The geologic evolution of the Central American Isthmus
    • Jackson J.B.C., Budd A.F., and Coates A.G. (Eds), University of Chicago Press, Chicago, IL
    • Coates A.G., and Obando J.A. The geologic evolution of the Central American Isthmus. In: Jackson J.B.C., Budd A.F., and Coates A.G. (Eds). Evolution and Environment in Tropical America (1996), University of Chicago Press, Chicago, IL 21-56
    • (1996) Evolution and Environment in Tropical America , pp. 21-56
    • Coates, A.G.1    Obando, J.A.2
  • 14
    • 9244244694 scopus 로고    scopus 로고
    • The geology of the Darien, Panama, and the late Miocene-Pliocene collision of the Panama arc with northwestern South America
    • Coates A.G., Collins L.S., Aubry M.P., and Berggren W.A. The geology of the Darien, Panama, and the late Miocene-Pliocene collision of the Panama arc with northwestern South America. Geol. Soc. Am. Bull. 116 (2004) 1327-1344
    • (2004) Geol. Soc. Am. Bull. , vol.116 , pp. 1327-1344
    • Coates, A.G.1    Collins, L.S.2    Aubry, M.P.3    Berggren, W.A.4
  • 15
    • 0003171395 scopus 로고
    • Fourth contribution to the herpetology of tropical America
    • Cope E.D. Fourth contribution to the herpetology of tropical America. Proc. Acad. Natl. Sci. Phila. 18 (1866) 123-132
    • (1866) Proc. Acad. Natl. Sci. Phila. , vol.18 , pp. 123-132
    • Cope, E.D.1
  • 16
    • 0141724871 scopus 로고    scopus 로고
    • Huge populations and old species of Costa Rican and Panamanian dirt frogs inferred from mitochondrial and nuclear gene sequences
    • Crawford A.J. Huge populations and old species of Costa Rican and Panamanian dirt frogs inferred from mitochondrial and nuclear gene sequences. Mol. Ecol. 12 (2003) 2525-2540
    • (2003) Mol. Ecol. , vol.12 , pp. 2525-2540
    • Crawford, A.J.1
  • 17
    • 0141695079 scopus 로고    scopus 로고
    • Relative rates of nucleotide substitution in frogs
    • Crawford A.J. Relative rates of nucleotide substitution in frogs. J. Mol. Evol. 57 (2003) 636-641
    • (2003) J. Mol. Evol. , vol.57 , pp. 636-641
    • Crawford, A.J.1
  • 18
    • 18144383554 scopus 로고    scopus 로고
    • Cenozoic biogeography and evolution in direct-developing frogs of Central America (Leptodactylidae: Eleutherodactylus) as inferred from a phylogenetic analysis of nuclear and mitochondrial genes
    • Crawford A.J., and Smith E.N. Cenozoic biogeography and evolution in direct-developing frogs of Central America (Leptodactylidae: Eleutherodactylus) as inferred from a phylogenetic analysis of nuclear and mitochondrial genes. Mol. Phylogenet. Evol. 35 (2005) 536-555
    • (2005) Mol. Phylogenet. Evol. , vol.35 , pp. 536-555
    • Crawford, A.J.1    Smith, E.N.2
  • 19
    • 36348957296 scopus 로고    scopus 로고
    • The role of tropical dry forest as a long-term barrier to dispersal: a comparative phylogeographic analysis of dry forest tolerant and intolerant frogs
    • Crawford A.J., Bermingham E., and Polanía C. The role of tropical dry forest as a long-term barrier to dispersal: a comparative phylogeographic analysis of dry forest tolerant and intolerant frogs. Mol. Ecol. 16 (2007) 4789-4807
    • (2007) Mol. Ecol. , vol.16 , pp. 4789-4807
    • Crawford, A.J.1    Bermingham, E.2    Polanía, C.3
  • 20
    • 0141471816 scopus 로고    scopus 로고
    • Historia geológica
    • Denyer P., and Kussmaul S. (Eds), Editorial Tecnológica de Costa Rica, Cartago, Costa Rica
    • Denyer P., Alvarado G.E., and Aguilar T. Historia geológica. In: Denyer P., and Kussmaul S. (Eds). Geología de Costa Rica (2000), Editorial Tecnológica de Costa Rica, Cartago, Costa Rica 155-167
    • (2000) Geología de Costa Rica , pp. 155-167
    • Denyer, P.1    Alvarado, G.E.2    Aguilar, T.3
  • 21
    • 0742270764 scopus 로고    scopus 로고
    • Molecular systematic analysis reveals cryptic tertiary diversification of a widespread tropical rain forest tree
    • Dick C.W., Abdul-Salim K., and Bermingham E. Molecular systematic analysis reveals cryptic tertiary diversification of a widespread tropical rain forest tree. Am. Nat. 162 (2003) 691-703
    • (2003) Am. Nat. , vol.162 , pp. 691-703
    • Dick, C.W.1    Abdul-Salim, K.2    Bermingham, E.3
  • 22
    • 44149091733 scopus 로고    scopus 로고
    • Duellman, W.E., 2001. The hylid frogs of Middle America, vol. 2. Contrib. Herpetol. 18, 695-1158.
    • Duellman, W.E., 2001. The hylid frogs of Middle America, vol. 2. Contrib. Herpetol. 18, 695-1158.
  • 23
    • 39749179077 scopus 로고    scopus 로고
    • Cryptic diversity and deep divergence in an upper Amazonian frog, Eleutherodactylus ockendeni
    • 10.1186/1471-2148-7-24
    • Elmer K.R., Dávila J.A., and Lougheed S.C. Cryptic diversity and deep divergence in an upper Amazonian frog, Eleutherodactylus ockendeni. BMC Evol. Biol. 7 (2007) 247 10.1186/1471-2148-7-24
    • (2007) BMC Evol. Biol. , vol.7 , pp. 247
    • Elmer, K.R.1    Dávila, J.A.2    Lougheed, S.C.3
  • 24
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: a maximum likelihood approach
    • Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17 (1981) 368-376
    • (1981) J. Mol. Evol. , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 25
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 27
    • 38549083165 scopus 로고    scopus 로고
    • Underestimation of species richness in Neotropical frogs revealed by mtDNA analyses
    • Fouquet F., Gilles A., Vences M., Marty C., Blanc M., and Gemmell N.J. Underestimation of species richness in Neotropical frogs revealed by mtDNA analyses. PLoS One 10 (2007) e1109
    • (2007) PLoS One , vol.10
    • Fouquet, F.1    Gilles, A.2    Vences, M.3    Marty, C.4    Blanc, M.5    Gemmell, N.J.6
  • 29
    • 0034351387 scopus 로고    scopus 로고
    • Likelihood-based tests of topologies in phylogenetics
    • Goldman N., Anderson J.P., and Rodrigo A.G. Likelihood-based tests of topologies in phylogenetics. Syst. Biol. 49 (2000) 652-670
    • (2000) Syst. Biol. , vol.49 , pp. 652-670
    • Goldman, N.1    Anderson, J.P.2    Rodrigo, A.G.3
  • 30
    • 0007205492 scopus 로고
    • The Cenozoic record of tropical dry forest in northern Latin America and the southern United States
    • Bullock S.H., Mooney H.A., and Medina E. (Eds), Cambridge University Press, Cambridge, England, UK
    • Graham A., and Dilcher D. The Cenozoic record of tropical dry forest in northern Latin America and the southern United States. In: Bullock S.H., Mooney H.A., and Medina E. (Eds). Seasonally Dry Tropical Forests (1995), Cambridge University Press, Cambridge, England, UK 124-145
    • (1995) Seasonally Dry Tropical Forests , pp. 124-145
    • Graham, A.1    Dilcher, D.2
  • 31
    • 0023618297 scopus 로고
    • Man's place in Hominoidea as inferred from molecular clocks of DNA
    • Hasegawa M., Kishino H., and Yano T. Man's place in Hominoidea as inferred from molecular clocks of DNA. J. Mol. Evol. 26 (1987) 132-147
    • (1987) J. Mol. Evol. , vol.26 , pp. 132-147
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 32
    • 34547214512 scopus 로고    scopus 로고
    • Major Caribbean and Central American frog faunas originated by ancient oceanic dispersal
    • Heinicke M.P., Duellman W.E., and Hedges S.B. Major Caribbean and Central American frog faunas originated by ancient oceanic dispersal. Proc. Natl. Acad. Sci. USA 104 (2007) 10092-10097
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 10092-10097
    • Heinicke, M.P.1    Duellman, W.E.2    Hedges, S.B.3
  • 33
    • 0003730427 scopus 로고
    • Tropical Science Center, San José, Costa Rica
    • Holdridge L.R. Life Zone Ecology (1967), Tropical Science Center, San José, Costa Rica
    • (1967) Life Zone Ecology
    • Holdridge, L.R.1
  • 34
    • 0024711523 scopus 로고
    • How often are polymorphic restriction sites due to a single mutation?
    • Hudson R.R. How often are polymorphic restriction sites due to a single mutation?. Theor. Popul. Biol. 36 (1989) 23-33
    • (1989) Theor. Popul. Biol. , vol.36 , pp. 23-33
    • Hudson, R.R.1
  • 35
    • 0002410257 scopus 로고    scopus 로고
    • Parametric bootstrapping in molecular phylogenetics: applications and performance
    • Ferraris J.D., and Palumbi S.R. (Eds), John Wiley and Sons, Inc., New York
    • Huelsenbeck J.P., Hillis D.M., and Jones R. Parametric bootstrapping in molecular phylogenetics: applications and performance. In: Ferraris J.D., and Palumbi S.R. (Eds). Molecular Zoology: Advances, Strategies, and Protocols (1996), John Wiley and Sons, Inc., New York 19-45
    • (1996) Molecular Zoology: Advances, Strategies, and Protocols , pp. 19-45
    • Huelsenbeck, J.P.1    Hillis, D.M.2    Jones, R.3
  • 36
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P., and Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 (2001) 754-755
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 37
    • 3142774290 scopus 로고    scopus 로고
    • A new species of Eleutherodactylus (Anura: Leptodactylidae) from the Darién Province, Panama
    • Ibáñez R., and Crawford A.J. A new species of Eleutherodactylus (Anura: Leptodactylidae) from the Darién Province, Panama. J. Herpetol. 38 (2004) 240-244
    • (2004) J. Herpetol. , vol.38 , pp. 240-244
    • Ibáñez, R.1    Crawford, A.J.2
  • 38
    • 0000593010 scopus 로고    scopus 로고
    • An overview of the herpetology of Panama
    • Mesoamerican Herpetology: Systematics, Zoography, and Conservation. Centennial Museum. Johnson J.D., Webb R.G., and Flores-Villela O. (Eds), University of Texas at El Paso, El Paso, TX
    • Ibáñez R., Solís F.A., Jaramillo C.A., and Rand A.S. An overview of the herpetology of Panama. In: Johnson J.D., Webb R.G., and Flores-Villela O. (Eds). Mesoamerican Herpetology: Systematics, Zoography, and Conservation. Centennial Museum. Special Publ. No. 1 (2001), University of Texas at El Paso, El Paso, TX 159-170
    • (2001) Special Publ. No. 1 , pp. 159-170
    • Ibáñez, R.1    Solís, F.A.2    Jaramillo, C.A.3    Rand, A.S.4
  • 39
    • 44149114065 scopus 로고    scopus 로고
    • IUCN, Conservation International, and NatureServe. 2004. Global Amphibian Assessment. (accessed 26.05.05.).
    • IUCN, Conservation International, and NatureServe. 2004. Global Amphibian Assessment. (accessed 26.05.05.).
  • 40
    • 85012971849 scopus 로고
    • Froschlurche von Fortuna, Panama III. Leptodactylidae
    • Jungfer K.-H. Froschlurche von Fortuna, Panama III. Leptodactylidae. Herpetofauna 10 57 (1988) 15-21
    • (1988) Herpetofauna , vol.10 , Issue.57 , pp. 15-21
    • Jungfer, K.-H.1
  • 41
    • 27744460350 scopus 로고    scopus 로고
    • Was southern Central America an archipelago or a peninsula in the middle Miocene? A test using land-mammal body size
    • Kirby M.X., and MacFadden B. Was southern Central America an archipelago or a peninsula in the middle Miocene? A test using land-mammal body size. Palaeogeogr. Palaeoclimatol. Palaeoecol. 228 (2005) 193-202
    • (2005) Palaeogeogr. Palaeoclimatol. Palaeoecol. , vol.228 , pp. 193-202
    • Kirby, M.X.1    MacFadden, B.2
  • 42
    • 4243714592 scopus 로고    scopus 로고
    • Herpeton Verlag, Offenbach, Federal Republic of Germany
    • Köhler G. Anfibios y Reptiles de Nicaragua (2001), Herpeton Verlag, Offenbach, Federal Republic of Germany
    • (2001) Anfibios y Reptiles de Nicaragua
    • Köhler, G.1
  • 43
    • 18744396738 scopus 로고    scopus 로고
    • Herpeton Verlag, Offenbach, Federal Republic of Germany
    • Köhler G. Reptiles of Central America (2003), Herpeton Verlag, Offenbach, Federal Republic of Germany
    • (2003) Reptiles of Central America
    • Köhler, G.1
  • 44
    • 0032495069 scopus 로고    scopus 로고
    • New dates and new rates for divergence across the Isthmus of Panama
    • Knowlton N., and Weigt L.A. New dates and new rates for divergence across the Isthmus of Panama. Proc. R. Soc. Lond. B 265 (1998) 2257-2263
    • (1998) Proc. R. Soc. Lond. B , vol.265 , pp. 2257-2263
    • Knowlton, N.1    Weigt, L.A.2
  • 45
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S., Tamura K., and Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinformat. 5 (2004) 150-163
    • (2004) Brief. Bioinformat. , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 46
    • 0027482104 scopus 로고
    • Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
    • Kumazawa Y., and Nishida M. Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J. Mol. Evol. 37 (1993) 380-398
    • (1993) J. Mol. Evol. , vol.37 , pp. 380-398
    • Kumazawa, Y.1    Nishida, M.2
  • 47
    • 36849161213 scopus 로고
    • Use of Panamanian sea urchins to test the molecular clock
    • Lessios H.A. Use of Panamanian sea urchins to test the molecular clock. Nature 280 (1979) 599-601
    • (1979) Nature , vol.280 , pp. 599-601
    • Lessios, H.A.1
  • 48
    • 0008143363 scopus 로고
    • Systematic status and distribution of some poorly known frogs of the genus Eleutherodactylus from the Chocoan lowlands of South America
    • Lynch J.D. Systematic status and distribution of some poorly known frogs of the genus Eleutherodactylus from the Chocoan lowlands of South America. Herpetologica 36 (1980) 175-189
    • (1980) Herpetologica , vol.36 , pp. 175-189
    • Lynch, J.D.1
  • 49
    • 0003372097 scopus 로고    scopus 로고
    • Frogs of the genus Eleutherodactylus in western Ecuador: systematics, ecology, and biogeography
    • Lynch J.D., and Duellman W.E. Frogs of the genus Eleutherodactylus in western Ecuador: systematics, ecology, and biogeography. Univ. Kansas Nat. Hist. Mus. Spec. Pub. 23 (1997) 1-236
    • (1997) Univ. Kansas Nat. Hist. Mus. Spec. Pub. , vol.23 , pp. 1-236
    • Lynch, J.D.1    Duellman, W.E.2
  • 51
    • 0031012089 scopus 로고    scopus 로고
    • Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome
    • Macey J.R., Larson A., Ananjeva N.B., Fang Z., and Papenfuss T.J. Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome. Mol. Biol. Evol. 14 (1997) 91-104
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 91-104
    • Macey, J.R.1    Larson, A.2    Ananjeva, N.B.3    Fang, Z.4    Papenfuss, T.J.5
  • 52
    • 0030966808 scopus 로고    scopus 로고
    • Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards
    • Macey J.R., Larson A., Ananjeva N.B., and Papenfuss T.J. Evolutionary shifts in three major structural features of the mitochondrial genome among iguanian lizards. J. Mol. Evol. 44 (1997) 660-674
    • (1997) J. Mol. Evol. , vol.44 , pp. 660-674
    • Macey, J.R.1    Larson, A.2    Ananjeva, N.B.3    Papenfuss, T.J.4
  • 53
    • 0031031728 scopus 로고    scopus 로고
    • Replication slippage may cause parallel evolution in the secondary structure of mitochondrial transfer RNAs
    • Macey J.R., Larson A., Ananjeva N.B., and Papenfuss T.J. Replication slippage may cause parallel evolution in the secondary structure of mitochondrial transfer RNAs. Mol. Biol. Evol. 14 (1997) 30-39
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 30-39
    • Macey, J.R.1    Larson, A.2    Ananjeva, N.B.3    Papenfuss, T.J.4
  • 54
    • 0031992652 scopus 로고    scopus 로고
    • Phylogenetic relationships of toads in the Bufo bufo species group from the eastern escarpment of the Tibetan Plateau: a case of vicariance and dispersal
    • Macey J.R., Schulte II J.A., Larson A., Fang Z., Wang Y., Tuniyev B.S., and Papenfuss T.J. Phylogenetic relationships of toads in the Bufo bufo species group from the eastern escarpment of the Tibetan Plateau: a case of vicariance and dispersal. Mol. Biol. Evol. 9 (1998) 80-87
    • (1998) Mol. Biol. Evol. , vol.9 , pp. 80-87
    • Macey, J.R.1    Schulte II, J.A.2    Larson, A.3    Fang, Z.4    Wang, Y.5    Tuniyev, B.S.6    Papenfuss, T.J.7
  • 56
    • 0024233246 scopus 로고
    • Land mammals and the Great American Interchange
    • Marshall L.G. Land mammals and the Great American Interchange. Am. Sci. 76 (1988) 380-388
    • (1988) Am. Sci. , vol.76 , pp. 380-388
    • Marshall, L.G.1
  • 58
    • 0020454329 scopus 로고
    • Mammalian evolution and the Great American Interchange
    • Marshall L.G., Webb S.D., Sepkoski J.J., and Raup D.M. Mammalian evolution and the Great American Interchange. Science 215 (1982) 1351-1357
    • (1982) Science , vol.215 , pp. 1351-1357
    • Marshall, L.G.1    Webb, S.D.2    Sepkoski, J.J.3    Raup, D.M.4
  • 60
    • 36348966739 scopus 로고    scopus 로고
    • The herpetofauna of the Rincón area, Península de Osa, Costa Rica, a Central American lowland evergreen forest site
    • Donnelly M.A., Crother B.I., Guyer C., Wake M.H., and White M.E. (Eds), University of Chicago Press, Chicago, IL
    • McDiarmid R.W., and Savage J.M. The herpetofauna of the Rincón area, Península de Osa, Costa Rica, a Central American lowland evergreen forest site. In: Donnelly M.A., Crother B.I., Guyer C., Wake M.H., and White M.E. (Eds). Ecology and Evolution in the Tropics: A Herpetological Perspective (2005), University of Chicago Press, Chicago, IL 366-427
    • (2005) Ecology and Evolution in the Tropics: A Herpetological Perspective , pp. 366-427
    • McDiarmid, R.W.1    Savage, J.M.2
  • 61
    • 0008763552 scopus 로고
    • Central American frogs allied to Eleutherodactylus cruentus: allozyme and morphological data
    • Miyamoto M.M. Central American frogs allied to Eleutherodactylus cruentus: allozyme and morphological data. J. Herpetol. 18 (1984) 256-263
    • (1984) J. Herpetol. , vol.18 , pp. 256-263
    • Miyamoto, M.M.1
  • 62
    • 0346125587 scopus 로고    scopus 로고
    • Rare snakes-five new species from eastern Panama: reviews of northern Atractus and southern Geophis (Colubridae: Dipsadinae)
    • Myers C.W. Rare snakes-five new species from eastern Panama: reviews of northern Atractus and southern Geophis (Colubridae: Dipsadinae). Am. Mus. Novitates 3391 (2003) 1-47
    • (2003) Am. Mus. Novitates , vol.3391 , pp. 1-47
    • Myers, C.W.1
  • 63
    • 34948903878 scopus 로고    scopus 로고
    • On the uniquely fragmented distribution of a rare Panamanian snake, Dipsas nicholsi (Colubridae: Dipsadinae)
    • Myers C.W., Ibáñez R., and Cadle J. On the uniquely fragmented distribution of a rare Panamanian snake, Dipsas nicholsi (Colubridae: Dipsadinae). Am. Mus. Novitates 3554 (2007) 1-18
    • (2007) Am. Mus. Novitates , vol.3554 , pp. 1-18
    • Myers, C.W.1    Ibáñez, R.2    Cadle, J.3
  • 64
    • 0005814023 scopus 로고
    • Mathematical model for studying genetic variation in terms of restriction endonucleases
    • Nei M., and Li W.-H. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. USA 76 (1979) 5269-5273
    • (1979) Proc. Natl. Acad. Sci. USA , vol.76 , pp. 5269-5273
    • Nei, M.1    Li, W.-H.2
  • 65
    • 33751021719 scopus 로고    scopus 로고
    • Refugial isolation and secondary contact in the dyeing poison frog Dendrobates tinctorius
    • Noonan B.P., and Gaucher P. Refugial isolation and secondary contact in the dyeing poison frog Dendrobates tinctorius. Mol. Ecol. 15 (2006) 4425-4435
    • (2006) Mol. Ecol. , vol.15 , pp. 4425-4435
    • Noonan, B.P.1    Gaucher, P.2
  • 66
    • 33747627707 scopus 로고    scopus 로고
    • The History of Amazonian mammals: mechanisms and timing of diversification
    • Bermingham E., Dick C.W., and Moritz C. (Eds), The University of Chicago Press, Chicago and London
    • Patton J.L., and Da Silva M.N.F. The History of Amazonian mammals: mechanisms and timing of diversification. In: Bermingham E., Dick C.W., and Moritz C. (Eds). Tropical Rainforest. Past, Present and Future (2005), The University of Chicago Press, Chicago and London
    • (2005) Tropical Rainforest. Past, Present and Future
    • Patton, J.L.1    Da Silva, M.N.F.2
  • 67
    • 0036395769 scopus 로고    scopus 로고
    • Evolutionary history of the genus Rhamdia (Teleostei: Pimelodidae) in Central America
    • Perdices A., Bermingham E., Montill A., and Doadriob I. Evolutionary history of the genus Rhamdia (Teleostei: Pimelodidae) in Central America. Mol. Phylogenet. Evol. 25 (2002) 172-189
    • (2002) Mol. Phylogenet. Evol. , vol.25 , pp. 172-189
    • Perdices, A.1    Bermingham, E.2    Montill, A.3    Doadriob, I.4
  • 70
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D., and Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 14 (1998) 817-818
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 71
    • 9644301241 scopus 로고    scopus 로고
    • Model selection and model averaging in phylogenetics: advantages of the AIC and Bayesian approaches over likelihood ratio tests
    • Posada D., and Buckley T.R. Model selection and model averaging in phylogenetics: advantages of the AIC and Bayesian approaches over likelihood ratio tests. Syst. Biol. 53 (2004) 793-808
    • (2004) Syst. Biol. , vol.53 , pp. 793-808
    • Posada, D.1    Buckley, T.R.2
  • 72
    • 44149115258 scopus 로고    scopus 로고
    • Rambaut, A., Charleston M., 2001. TreeEdit version 1.0 alpha 10. Distributed by the authors.
    • Rambaut, A., Charleston M., 2001. TreeEdit version 1.0 alpha 10. Distributed by the authors.
  • 73
    • 0030928378 scopus 로고    scopus 로고
    • Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
    • Rambaut A., and Grassly N.C. Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. Comput. Appl. Biosci. 13 (1997) 235-238
    • (1997) Comput. Appl. Biosci. , vol.13 , pp. 235-238
    • Rambaut, A.1    Grassly, N.C.2
  • 74
    • 0036897674 scopus 로고    scopus 로고
    • Statistical properties of new neutrality tests against population growth
    • Ramos-Onsins S.E., and Rozas J. Statistical properties of new neutrality tests against population growth. Mol. Biol. Evol. 19 (2002) 2092-2100
    • (2002) Mol. Biol. Evol. , vol.19 , pp. 2092-2100
    • Ramos-Onsins, S.E.1    Rozas, J.2
  • 75
    • 0029818407 scopus 로고    scopus 로고
    • Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference
    • Rannala B., and Yang Z. Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. J. Mol. Evol. 43 (1996) 304-311
    • (1996) J. Mol. Evol. , vol.43 , pp. 304-311
    • Rannala, B.1    Yang, Z.2
  • 76
    • 33744491279 scopus 로고    scopus 로고
    • Colonization, population expansion, and lineage turnover: phylogeography of Mesoamerican characiform fish
    • Reeves R.G., and Bermingham E. Colonization, population expansion, and lineage turnover: phylogeography of Mesoamerican characiform fish. Biol. J. Linn. Soc. 88 (2006) 235-255
    • (2006) Biol. J. Linn. Soc. , vol.88 , pp. 235-255
    • Reeves, R.G.1    Bermingham, E.2
  • 77
    • 44149114806 scopus 로고    scopus 로고
    • Ridgely, R.S., Allnutt, T.F., Brooks, T., McNicol, D.K., Mehlman, D.W., Young, B.E., Zook, J.R. 2003. Digital Distribution Maps of the Birds of the Western Hemisphere, version 1.0. NatureServe, Arlington, VA, USA. Available from: .
    • Ridgely, R.S., Allnutt, T.F., Brooks, T., McNicol, D.K., Mehlman, D.W., Young, B.E., Zook, J.R. 2003. Digital Distribution Maps of the Birds of the Western Hemisphere, version 1.0. NatureServe, Arlington, VA, USA. Available from: .
  • 78
    • 0347513220 scopus 로고    scopus 로고
    • DnaSP, DNA polymorphism analyses by the coalescent and other methods
    • Rozas J., Sánchez-DelBarrio J.C., Messeguer X., and Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19 (2003) 2496-2497
    • (2003) Bioinformatics , vol.19 , pp. 2496-2497
    • Rozas, J.1    Sánchez-DelBarrio, J.C.2    Messeguer, X.3    Rozas, R.4
  • 80
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 81
    • 0030773749 scopus 로고    scopus 로고
    • A nonparametric approach to estimating divergence times in the absence of rate constancy
    • Sanderson M.J. A nonparametric approach to estimating divergence times in the absence of rate constancy. Mol. Biol. Evol. 14 (1997) 1218-1231
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 1218-1231
    • Sanderson, M.J.1
  • 82
    • 0038629689 scopus 로고
    • The systematic status of Central American frogs confused with Eleutherodactylus cruentus
    • Savage J.M. The systematic status of Central American frogs confused with Eleutherodactylus cruentus. Proc. Biol. Soc. Wash. 94 (1981) 413-420
    • (1981) Proc. Biol. Soc. Wash. , vol.94 , pp. 413-420
    • Savage, J.M.1
  • 83
    • 0000027726 scopus 로고
    • The enigma of the Central American herpetofauna: dispersal or vicariance?
    • Savage J.M. The enigma of the Central American herpetofauna: dispersal or vicariance?. Ann. MO Bot. Gard. 69 (1982) 464-547
    • (1982) Ann. MO Bot. Gard. , vol.69 , pp. 464-547
    • Savage, J.M.1
  • 85
    • 0001881618 scopus 로고
    • Preservation of avian blood and tissue samples for DNA analyses
    • Seutin G., White B.N., and Boag P.T. Preservation of avian blood and tissue samples for DNA analyses. Can. J. Zool. 69 (1991) 82-90
    • (1991) Can. J. Zool. , vol.69 , pp. 82-90
    • Seutin, G.1    White, B.N.2    Boag, P.T.3
  • 86
    • 26444466173 scopus 로고    scopus 로고
    • The comparison of the confidence regions in phylogeny
    • Shi X., Gu H., Susko E., and Field C. The comparison of the confidence regions in phylogeny. Mol. Biol. Evol. 22 (2005) 2285-2296
    • (2005) Mol. Biol. Evol. , vol.22 , pp. 2285-2296
    • Shi, X.1    Gu, H.2    Susko, E.3    Field, C.4
  • 87
    • 0001500410 scopus 로고
    • Mammals and land bridges
    • Simpson G. Mammals and land bridges. J. Wash. Acad. Sci. 30 (1940) 137-163
    • (1940) J. Wash. Acad. Sci. , vol.30 , pp. 137-163
    • Simpson, G.1
  • 88
    • 33745348139 scopus 로고    scopus 로고
    • The biogeography of lower Mesoamerican freshwater fishes
    • Smith S.A., and Bermingham E. The biogeography of lower Mesoamerican freshwater fishes. J. Biogeogr. 32 (2005) 1835-1854
    • (2005) J. Biogeogr. , vol.32 , pp. 1835-1854
    • Smith, S.A.1    Bermingham, E.2
  • 89
    • 28644437950 scopus 로고    scopus 로고
    • Replicate patterns of species richness, historical biogeography, and phylogeny in Holarctic treefrogs
    • Smith S.A., Stephens P.R., and Wiens J.J. Replicate patterns of species richness, historical biogeography, and phylogeny in Holarctic treefrogs. Evolution 59 (2005) 2433-2450
    • (2005) Evolution , vol.59 , pp. 2433-2450
    • Smith, S.A.1    Stephens, P.R.2    Wiens, J.J.3
  • 90
    • 0028206114 scopus 로고
    • Mitochondrial DNA sequence variation in the spruce budworm species complex (Choristoneura: Lepidoptera)
    • Sperling F.A., and Hickey D.A. Mitochondrial DNA sequence variation in the spruce budworm species complex (Choristoneura: Lepidoptera). Mol. Biol. Evol. 11 (1994) 656-665
    • (1994) Mol. Biol. Evol. , vol.11 , pp. 656-665
    • Sperling, F.A.1    Hickey, D.A.2
  • 92
    • 33748638817 scopus 로고    scopus 로고
    • High level of cryptic species diversity revealed by sympatric lineages of southeast Asian forest frogs
    • Stuart B.L., Inger R.F., and Voris H.K. High level of cryptic species diversity revealed by sympatric lineages of southeast Asian forest frogs. Biol. Lett. 2 (2006) 470-474
    • (2006) Biol. Lett. , vol.2 , pp. 470-474
    • Stuart, B.L.1    Inger, R.F.2    Voris, H.K.3
  • 93
    • 44149099599 scopus 로고    scopus 로고
    • *and Other Methods), version 4.0. Sinauer Associates, Sunderland, MA.
    • *and Other Methods), version 4.0. Sinauer Associates, Sunderland, MA.
  • 94
    • 44149093634 scopus 로고    scopus 로고
    • Swofford, D.L., Olsen, G.J., Waddell, P.J., Hillis, D.M., 1996. Phylogenetic inference. In: Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Molecular Systematics. Sinauer, Sunderland, MA, pp. 407-514.
    • Swofford, D.L., Olsen, G.J., Waddell, P.J., Hillis, D.M., 1996. Phylogenetic inference. In: Hillis, D.M., Moritz, C., Mable, B.K. (Eds.), Molecular Systematics. Sinauer, Sunderland, MA, pp. 407-514.
  • 95
    • 0027157960 scopus 로고
    • Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
    • Tamura K., and Nei M. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10 (1993) 512-526
    • (1993) Mol. Biol. Evol. , vol.10 , pp. 512-526
    • Tamura, K.1    Nei, M.2
  • 96
    • 0002671410 scopus 로고
    • Some probabilistic and statistical problems on the analysis of DNA sequences
    • Tavaré S. Some probabilistic and statistical problems on the analysis of DNA sequences. Lect. Math. Life Sci. 17 (1986) 57-86
    • (1986) Lect. Math. Life Sci. , vol.17 , pp. 57-86
    • Tavaré, S.1
  • 97
    • 0029058158 scopus 로고
    • A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation
    • Templeton A.R., Crandall A., and Sing C.F. A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 140 (1992) 767-782
    • (1992) Genetics , vol.140 , pp. 767-782
    • Templeton, A.R.1    Crandall, A.2    Sing, C.F.3
  • 98
    • 0004034865 scopus 로고
    • Tropical Science Center, San José, Costa Rica
    • Tosi J.A. Ecological Map of Costa Rica (1969), Tropical Science Center, San José, Costa Rica
    • (1969) Ecological Map of Costa Rica
    • Tosi, J.A.1
  • 99
    • 0002565806 scopus 로고
    • The American herpetofauna and the interchange
    • Stehli F.G., and Webb S.D. (Eds), Plenum Press, New York, NY
    • Vanzolini P.E., and Heyer W.R. The American herpetofauna and the interchange. In: Stehli F.G., and Webb S.D. (Eds). The Great American Biotic Interchange (1985), Plenum Press, New York, NY 475-487
    • (1985) The Great American Biotic Interchange , pp. 475-487
    • Vanzolini, P.E.1    Heyer, W.R.2
  • 100
    • 1842665043 scopus 로고    scopus 로고
    • Phylogeography of Ptychadena mascareniensis suggests transoceanic dispersal in a widespread African-Malagasy frog lineage
    • Vences M., Kosuch J., Rödel M.-O., Lötters S., Channing A., Glaw F., and Böhme W. Phylogeography of Ptychadena mascareniensis suggests transoceanic dispersal in a widespread African-Malagasy frog lineage. J. Biogeogr. 31 (2004) 593-601
    • (2004) J. Biogeogr. , vol.31 , pp. 593-601
    • Vences, M.1    Kosuch, J.2    Rödel, M.-O.3    Lötters, S.4    Channing, A.5    Glaw, F.6    Böhme, W.7
  • 101
    • 0002017706 scopus 로고    scopus 로고
    • Late Cenozoic evolution of the Neotropical mammal fauna
    • Jackson J.B.C., Budd A.F., and Coates A.G. (Eds), University of Chicago Press, Chicago
    • Webb S.D., and Rancy A. Late Cenozoic evolution of the Neotropical mammal fauna. In: Jackson J.B.C., Budd A.F., and Coates A.G. (Eds). Evolution and Environment in Tropical America (1996), University of Chicago Press, Chicago 335-358
    • (1996) Evolution and Environment in Tropical America , pp. 335-358
    • Webb, S.D.1    Rancy, A.2
  • 102
    • 33644674358 scopus 로고    scopus 로고
    • Biogeography of the túngara frog, Physalaemus pustulosus: a molecular perspective
    • Weigt L.A., Crawford A.J., Rand A.S., and Ryan M.J. Biogeography of the túngara frog, Physalaemus pustulosus: a molecular perspective. Mol. Ecol. 14 (2005) 3857-3876
    • (2005) Mol. Ecol. , vol.14 , pp. 3857-3876
    • Weigt, L.A.1    Crawford, A.J.2    Rand, A.S.3    Ryan, M.J.4
  • 103
    • 0001485295 scopus 로고
    • Miocene mammals and Central American seaways
    • Whitmore Jr. F.C., and Stewart R.H. Miocene mammals and Central American seaways. Science 148 (1965) 180-185
    • (1965) Science , vol.148 , pp. 180-185
    • Whitmore Jr., F.C.1    Stewart, R.H.2
  • 104
    • 33750945167 scopus 로고    scopus 로고
    • Evolutionary and ecological causes of the latitudinal diversity gradient in hylid frogs: treefrog trees unearth the roots of high tropical diversity
    • Wiens J.J., Graham C.H., Moen D.S., Smith S.A., and Reeder T.W. Evolutionary and ecological causes of the latitudinal diversity gradient in hylid frogs: treefrog trees unearth the roots of high tropical diversity. Am. Nat. 168 (2006) 579-596
    • (2006) Am. Nat. , vol.168 , pp. 579-596
    • Wiens, J.J.1    Graham, C.H.2    Moen, D.S.3    Smith, S.A.4    Reeder, T.W.5
  • 105
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods
    • Yang Z. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39 (1994) 306-324
    • (1994) J. Mol. Evol. , vol.39 , pp. 306-324
    • Yang, Z.1
  • 106
    • 0030749810 scopus 로고    scopus 로고
    • Bayesian phylogenetic inference using DNA sequences: a Markov chain Monte Carlo method
    • Yang Z., and Rannala B. Bayesian phylogenetic inference using DNA sequences: a Markov chain Monte Carlo method. Mol. Biol. Evol. 14 (1997) 717-724
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 717-724
    • Yang, Z.1    Rannala, B.2
  • 107
    • 0031472784 scopus 로고    scopus 로고
    • Phylogeography of the bushmaster (Lachesis muta: Viperidae): implications for Neotropical biogeography, systematics, and conservation
    • Zamudio K.R., and Greene H.W. Phylogeography of the bushmaster (Lachesis muta: Viperidae): implications for Neotropical biogeography, systematics, and conservation. Biol. J. Linn. Soc. 62 (1997) 421-442
    • (1997) Biol. J. Linn. Soc. , vol.62 , pp. 421-442
    • Zamudio, K.R.1    Greene, H.W.2
  • 108
    • 0141501460 scopus 로고    scopus 로고
    • Phylogeography of the harlequin beetle-riding pseudoscorpion and the rise of the Isthmus of Panama
    • Zeh J.A., Zeh D.W., and Bonilla M.M. Phylogeography of the harlequin beetle-riding pseudoscorpion and the rise of the Isthmus of Panama. Mol. Ecol. 12 (2003) 2759-2769
    • (2003) Mol. Ecol. , vol.12 , pp. 2759-2769
    • Zeh, J.A.1    Zeh, D.W.2    Bonilla, M.M.3


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