-
1
-
-
0742305866
-
Network biology: Understanding the cell's functional organization
-
Barabasi AL, Oltvai ZN (2004) Network biology: understanding the cell's functional organization. Nat Rev Genet 5(2): 101-113.
-
(2004)
Nat Rev Genet
, vol.5
, Issue.2
, pp. 101-113
-
-
Barabasi, A.L.1
Oltvai, Z.N.2
-
2
-
-
18844372332
-
Understanding the generation and function of memory T cell subsets
-
Lanzavecchia A, Sallusto F (2005) Understanding the generation and function of memory T cell subsets. Curr Opin Immunol 17(3): 326-332.
-
(2005)
Curr Opin Immunol
, vol.17
, Issue.3
, pp. 326-332
-
-
Lanzavecchia, A.1
Sallusto, F.2
-
3
-
-
0024548313
-
Contingent genetic regulatory events in T lymphocyte activation
-
Crabtree GR (1989) Contingent genetic regulatory events in T lymphocyte activation. Science 243(4889): 355-361.
-
(1989)
Science
, vol.243
, Issue.4889
, pp. 355-361
-
-
Crabtree, G.R.1
-
4
-
-
0036888372
-
Cytokines: Promoters and dampeners of autoimmunity
-
Hill N, Sarvetnick N (2002) Cytokines: promoters and dampeners of autoimmunity. Curr Opin Immunol 14(6): 791-797.
-
(2002)
Curr Opin Immunol
, vol.14
, Issue.6
, pp. 791-797
-
-
Hill, N.1
Sarvetnick, N.2
-
5
-
-
0038482134
-
Transcriptional analysis of targets in multiple sclerosis
-
Steinman L, Zamvil S (2003) Transcriptional analysis of targets in multiple sclerosis. Nat Rev Immunol 3(6): 483-492.
-
(2003)
Nat Rev Immunol
, vol.3
, Issue.6
, pp. 483-492
-
-
Steinman, L.1
Zamvil, S.2
-
6
-
-
17644396349
-
Immunology of multiple sclerosis
-
Sospedra M, Martin R (2005) Immunology of multiple sclerosis. Annu Rev Immunol 23: 683-747.
-
(2005)
Annu Rev Immunol
, vol.23
, pp. 683-747
-
-
Sospedra, M.1
Martin, R.2
-
7
-
-
0035854450
-
The art of the probable: System control in the adaptive immune system
-
Germain RN (2001) The art of the probable: system control in the adaptive immune system. Science 293(5528): 240-245.
-
(2001)
Science
, vol.293
, Issue.5528
, pp. 240-245
-
-
Germain, R.N.1
-
8
-
-
17044454394
-
Inverse correlation between the incidences of autoimmune disease and infection predicted by a model of T cell mediated tolerance
-
Leon K, Faro J, Lage A, Carneiro J (2004) Inverse correlation between the incidences of autoimmune disease and infection predicted by a model of T cell mediated tolerance. J Autoimmun 22(1): 31-42.
-
(2004)
J Autoimmun
, vol.22
, Issue.1
, pp. 31-42
-
-
Leon, K.1
Faro, J.2
Lage, A.3
Carneiro, J.4
-
9
-
-
20444485767
-
Cellular and genetic mechanisms of self tolerance and autoimmunity
-
Goodnow CC, Sprent J, Fazekas de St Groth B, Vinuesa GG (2005) Cellular and genetic mechanisms of self tolerance and autoimmunity. Nature 435(7042): 590-597.
-
(2005)
Nature
, vol.435
, Issue.7042
, pp. 590-597
-
-
Goodnow, C.C.1
Sprent, J.2
Fazekas de St Groth, B.3
Vinuesa, G.G.4
-
10
-
-
0033179679
-
On the role of feedback in promoting conflicting goals of the adaptive immune system
-
Segel LA, Bar-Or RL (1999) On the role of feedback in promoting conflicting goals of the adaptive immune system. J Immunol 163(3): 1342-1349.
-
(1999)
J Immunol
, vol.163
, Issue.3
, pp. 1342-1349
-
-
Segel, L.A.1
Bar-Or, R.L.2
-
11
-
-
26844577358
-
The many sounds of T lymphocyte silence
-
Melero I, Arina A, Chen L (2005) The many sounds of T lymphocyte silence. Immunol Res 33(2): 135-147.
-
(2005)
Immunol Res
, vol.33
, Issue.2
, pp. 135-147
-
-
Melero, I.1
Arina, A.2
Chen, L.3
-
12
-
-
7644241654
-
Metabolic Syndrome and Robustness Tradeoffs
-
Kitano H, Kanae O, T K, Y M, Csete M, et al. (2004) Metabolic Syndrome and Robustness Tradeoffs. Diabetes 53(S3): S6-S15.
-
(2004)
Diabetes
, vol.53
, Issue.S3
-
-
Kitano, H.1
Oda, K.2
Kimura, T.3
Matsuoka, Y.4
Csete, M.5
-
13
-
-
33847377573
-
A robustness-based approach to systems-oriented drug design
-
Kitano H (2007) A robustness-based approach to systems-oriented drug design. Nat Rev Drug Discov 6(3): 202-210.
-
(2007)
Nat Rev Drug Discov
, vol.6
, Issue.3
, pp. 202-210
-
-
Kitano, H.1
-
14
-
-
33749059726
-
The neurobiology of multiple sclerosis: Genes, inflammation, and neurodegeneration
-
Hauser SL, Oksenberg JR (2006) The neurobiology of multiple sclerosis: genes, inflammation, and neurodegeneration. Neuron 52(1): 61-76.
-
(2006)
Neuron
, vol.52
, Issue.1
, pp. 61-76
-
-
Hauser, S.L.1
Oksenberg, J.R.2
-
15
-
-
0035799707
-
Lethality and centrality in protein networks
-
Jeong H, Mason SP, Barabasi AL, Oltvai ZN (2001) Lethality and centrality in protein networks. Nature 411(6833): 41-42.
-
(2001)
Nature
, vol.411
, Issue.6833
, pp. 41-42
-
-
Jeong, H.1
Mason, S.P.2
Barabasi, A.L.3
Oltvai, Z.N.4
-
16
-
-
15744367955
-
-
Styczynski MP SG (2005) Overview of computational methods for the inference of gene regulatory networks. Computers & Chemical Engineering 29: 519-534.
-
Styczynski MP SG (2005) Overview of computational methods for the inference of gene regulatory networks. Computers & Chemical Engineering 29: 519-534.
-
-
-
-
17
-
-
17644427718
-
Causal protein-signaling networks derived from multiparameter single-cell data
-
Sachs K, Perez O, Pe'er D, Lauffenburger DA, Nolan GP (2005) Causal protein-signaling networks derived from multiparameter single-cell data. Science 308(5721): 523-529.
-
(2005)
Science
, vol.308
, Issue.5721
, pp. 523-529
-
-
Sachs, K.1
Perez, O.2
Pe'er, D.3
Lauffenburger, D.A.4
Nolan, G.P.5
-
18
-
-
33847055114
-
How to infer gene networks from expression profiles
-
Epub 2007 Feb 2013
-
Bansal M, Belcastro V, Ambesi-Impiombato A, di Bernardo D (2007) How to infer gene networks from expression profiles. Mol Syst Biol 3: 78, Epub 2007 Feb 2013.
-
(2007)
Mol Syst Biol
, vol.3
, pp. 78
-
-
Bansal, M.1
Belcastro, V.2
Ambesi-Impiombato, A.3
di Bernardo, D.4
-
19
-
-
33749335282
-
The Connectivity Map: Using gene-expression signatures to connect small molecules, genes, and disease
-
Lamb J, Crawford ED, Peck D, Modell JW, Blat IC, et al. (2006) The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease. Science 313(5795): 1929-1935.
-
(2006)
Science
, vol.313
, Issue.5795
, pp. 1929-1935
-
-
Lamb, J.1
Crawford, E.D.2
Peck, D.3
Modell, J.W.4
Blat, I.C.5
-
20
-
-
0036683181
-
Linking the genes: Inferring quantitative gene networks from microarray data
-
de la Fuente A, Brazhnik P, Mendes P (2002) Linking the genes: inferring quantitative gene networks from microarray data. Trends Genet 18(8): 395-398.
-
(2002)
Trends Genet
, vol.18
, Issue.8
, pp. 395-398
-
-
de la Fuente, A.1
Brazhnik, P.2
Mendes, P.3
-
21
-
-
4444226267
-
Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data
-
Sontag E, Kiyatkin A, Kholodenko BN (2004) Inferring dynamic architecture of cellular networks using time series of gene expression, protein and metabolite data. Bioinformatics 20(12): 1877-1886.
-
(2004)
Bioinformatics
, vol.20
, Issue.12
, pp. 1877-1886
-
-
Sontag, E.1
Kiyatkin, A.2
Kholodenko, B.N.3
-
22
-
-
32144453095
-
Generalized concept of minimal cut sets in biochemical networks
-
Klamt S (2006) Generalized concept of minimal cut sets in biochemical networks. Biosystems 83(2-3): 233-247.
-
(2006)
Biosystems
, vol.83
, Issue.2-3
, pp. 233-247
-
-
Klamt, S.1
-
25
-
-
33646001437
-
Targeting cytokines of the interleukin-12 family in autoimmunity
-
Kang BY, Kim TS (2006) Targeting cytokines of the interleukin-12 family in autoimmunity. Curr Med Chem 13(10): 1149-1156.
-
(2006)
Curr Med Chem
, vol.13
, Issue.10
, pp. 1149-1156
-
-
Kang, B.Y.1
Kim, T.S.2
-
26
-
-
24144487695
-
Molecules involved in T-B co-stimulation and B cell homeostasis: Possible targets for an immunological intervention in autoimmunity
-
Peter HH, Warnatz K (2005) Molecules involved in T-B co-stimulation and B cell homeostasis: possible targets for an immunological intervention in autoimmunity. Expert Opin Biol Ther 5(Suppl 1): S61-71.
-
(2005)
Expert Opin Biol Ther
, vol.5
, Issue.SUPPL. 1
-
-
Peter, H.H.1
Warnatz, K.2
-
27
-
-
0038617550
-
The role of interleukin 10 in the control of autoimmunity
-
Roncarolo MG, Battaglia M, Gregori S (2003) The role of interleukin 10 in the control of autoimmunity. J Autoimmun 20(4): 269-272.
-
(2003)
J Autoimmun
, vol.20
, Issue.4
, pp. 269-272
-
-
Roncarolo, M.G.1
Battaglia, M.2
Gregori, S.3
-
28
-
-
27744432242
-
The immunopharmacological properties of transforming growth factor beta
-
Epub 2005 Aug 1772, 2005
-
Le Y, Yu X, Ruan L, Wang O, Qi D, et al. (2005) The immunopharmacological properties of transforming growth factor beta. Int Immunopharmacol 5(13-14): 1771-1782, Epub 2005 Aug 1772..
-
(1771)
Int Immunopharmacol
, vol.5
, Issue.13-14
-
-
Le, Y.1
Yu, X.2
Ruan, L.3
Wang, O.4
Qi, D.5
-
29
-
-
17644398787
-
Anti-alpha4 integrin therapy for multiple sclerosis: Mechanisms and rationale
-
Rice GP, Hartung HP, Calabresi PA (2005) Anti-alpha4 integrin therapy for multiple sclerosis: mechanisms and rationale. Neurology 64(8): 1336-1342.
-
(2005)
Neurology
, vol.64
, Issue.8
, pp. 1336-1342
-
-
Rice, G.P.1
Hartung, H.P.2
Calabresi, P.A.3
-
30
-
-
43549108167
-
-
The Games Collaborative G (2006) Linkage disequilibrium screening for multiple sclerosis implicates JAG1 and POU2AF1 as susceptibility genes in Europeans. J Neuroimmunol 23: 23.
-
The Games Collaborative G (2006) Linkage disequilibrium screening for multiple sclerosis implicates JAG1 and POU2AF1 as susceptibility genes in Europeans. J Neuroimmunol 23: 23.
-
-
-
-
31
-
-
33845894709
-
Notch signalling during peripheral T-cell activation and differentiation
-
Epub 2006 Dec 2015
-
Osborne BA, Minter LM (2007) Notch signalling during peripheral T-cell activation and differentiation. Nat Rev Immunol 7(1): 64-75, Epub 2006 Dec 2015..
-
(2007)
Nat Rev Immunol
, vol.7
, Issue.1
, pp. 64-75
-
-
Osborne, B.A.1
Minter, L.M.2
-
32
-
-
23844549973
-
Notch ligands Delta-like1, Delta-like4 and Jagged1 differentially regulate activation of peripheral T helper cells
-
Rutz S, Mordmuller B, Sakano S, Scheffold A (2005) Notch ligands Delta-like1, Delta-like4 and Jagged1 differentially regulate activation of peripheral T helper cells. Eur J Immunol 35(8): 2443-2451.
-
(2005)
Eur J Immunol
, vol.35
, Issue.8
, pp. 2443-2451
-
-
Rutz, S.1
Mordmuller, B.2
Sakano, S.3
Scheffold, A.4
-
33
-
-
0031930238
-
The human homolog of rat Jagged1 expressed by marrow stroma inhibits differentiation of 32D cells through interaction with Notch1
-
Li L, Milner LA, Deng Y, Iwata M, Banta A, et al. (1998) The human homolog of rat Jagged1 expressed by marrow stroma inhibits differentiation of 32D cells through interaction with Notch1. Immunity 8(1): 43-55.
-
(1998)
Immunity
, vol.8
, Issue.1
, pp. 43-55
-
-
Li, L.1
Milner, L.A.2
Deng, Y.3
Iwata, M.4
Banta, A.5
-
35
-
-
34547140875
-
-
Goh KI, Cusick ME, Valle D, Childs B, Vidal M, et al. (2007) The human disease network. Proc Natl Acad Sci U S A.
-
Goh KI, Cusick ME, Valle D, Childs B, Vidal M, et al. (2007) The human disease network. Proc Natl Acad Sci U S A.
-
-
-
-
36
-
-
0037079054
-
Computational systems biology
-
Kitano H (2002) Computational systems biology. Nature 420(6912): 206-210.
-
(2002)
Nature
, vol.420
, Issue.6912
, pp. 206-210
-
-
Kitano, H.1
-
37
-
-
0842288337
-
Inferring cellular networks using probabilistic graphical models
-
Friedman N (2004) Inferring cellular networks using probabilistic graphical models. Science 303(5659): 799-805.
-
(2004)
Science
, vol.303
, Issue.5659
, pp. 799-805
-
-
Friedman, N.1
-
38
-
-
33746356813
-
Human regulatory T cells and their role in autoimmune disease
-
Baecher-Allan C, Haller DA (2006) Human regulatory T cells and their role in autoimmune disease. Immunol Rev 212: 203-216.
-
(2006)
Immunol Rev
, vol.212
, pp. 203-216
-
-
Baecher-Allan, C.1
Haller, D.A.2
-
39
-
-
2342496710
-
Instruction of distinct CD4 T helper cell fates by different notch ligands on antigen-presenting cells
-
Amsen D, Blander JM, Lee GR, Tanigaki K, Honjo T, et al. (2004) Instruction of distinct CD4 T helper cell fates by different notch ligands on antigen-presenting cells. Cell 117(4): 515-526.
-
(2004)
Cell
, vol.117
, Issue.4
, pp. 515-526
-
-
Amsen, D.1
Blander, J.M.2
Lee, G.R.3
Tanigaki, K.4
Honjo, T.5
-
40
-
-
0029057858
-
Cloning of murine Stat6 and human Stat6, Stat proteins that are tyrosine phosphorylated in responses to IL-4 and IL-3 but are not required for mitogenesis
-
Quelle FW, Shimoda K, Thierfelder W, Fischer C, Kim A, et al. (1995) Cloning of murine Stat6 and human Stat6, Stat proteins that are tyrosine phosphorylated in responses to IL-4 and IL-3 but are not required for mitogenesis. Mol Cell Biol 15(6): 3336-3343.
-
(1995)
Mol Cell Biol
, vol.15
, Issue.6
, pp. 3336-3343
-
-
Quelle, F.W.1
Shimoda, K.2
Thierfelder, W.3
Fischer, C.4
Kim, A.5
-
41
-
-
17644372733
-
IPC: Professional type 1 interferon-producing cells and plasmacytoid dendritic cell precursors
-
Liu YJ (2005) IPC: professional type 1 interferon-producing cells and plasmacytoid dendritic cell precursors. Annu Rev Immunol 23: 275-306.
-
(2005)
Annu Rev Immunol
, vol.23
, pp. 275-306
-
-
Liu, Y.J.1
-
42
-
-
0347895101
-
Activation of human CD4+ cells with CD3 and CD46 induces a T-regulatory cell 1 phenotype
-
Kemper C, Chan AC, Green JM, Brett KA, Murphy KM, et al. (2003) Activation of human CD4+ cells with CD3 and CD46 induces a T-regulatory cell 1 phenotype. Nature 421(6921): 388-392.
-
(2003)
Nature
, vol.421
, Issue.6921
, pp. 388-392
-
-
Kemper, C.1
Chan, A.C.2
Green, J.M.3
Brett, K.A.4
Murphy, K.M.5
-
43
-
-
0033584863
-
CD45-induced tumor necrosis factor alpha production in monocytes is phosphatidylinositol 3-kinase-dependent and nuclear factor-kappaB-independent
-
Hayes AL, Smith C, Foxwell BM, Brennan FM (1999) CD45-induced tumor necrosis factor alpha production in monocytes is phosphatidylinositol 3-kinase-dependent and nuclear factor-kappaB-independent. J Biol Chem 274(47): 33455-33461.
-
(1999)
J Biol Chem
, vol.274
, Issue.47
, pp. 33455-33461
-
-
Hayes, A.L.1
Smith, C.2
Foxwell, B.M.3
Brennan, F.M.4
-
44
-
-
19644375686
-
Molecular mechanism of TNF signaling and beyond
-
Liu ZG (2005) Molecular mechanism of TNF signaling and beyond. Cell Res 15(1): 24-27.
-
(2005)
Cell Res
, vol.15
, Issue.1
, pp. 24-27
-
-
Liu, Z.G.1
-
45
-
-
13844322149
-
Regulatory mechanisms and their therapeutic implications of interleukin-12 production in immune cells
-
Epub 2005 Jan 2015
-
Kang BY, Kim E, Kim TS (2005) Regulatory mechanisms and their therapeutic implications of interleukin-12 production in immune cells. Cell Signal 17(6): 665-673, Epub 2005 Jan 2015..
-
(2005)
Cell Signal
, vol.17
, Issue.6
, pp. 665-673
-
-
Kang, B.Y.1
Kim, E.2
Kim, T.S.3
-
46
-
-
5144235394
-
Autoimmune concepts of multiple sclerosis as a basis for selective immunotherapy: From pipe dreams to (therapeutic) pipelines
-
Hohlfeld R, Wekerle H (2004) Autoimmune concepts of multiple sclerosis as a basis for selective immunotherapy: from pipe dreams to (therapeutic) pipelines. Proc Natl Acad Sci U S A 101 Suppl 2: 14599-14606.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, Issue.SUPPL. 2
, pp. 14599-14606
-
-
Hohlfeld, R.1
Wekerle, H.2
-
47
-
-
2342549670
-
Chemokine network in multiple sclerosis: Role in pathogenesis and targeting for future treatments
-
Galimberti D, Bresolin N, Scarpini E (2004) Chemokine network in multiple sclerosis: role in pathogenesis and targeting for future treatments. Expert Rev Neurother 4(3): 439-453.
-
(2004)
Expert Rev Neurother
, vol.4
, Issue.3
, pp. 439-453
-
-
Galimberti, D.1
Bresolin, N.2
Scarpini, E.3
-
48
-
-
0344987883
-
Immunomodulation in multiple sclerosis: From immunosuppression to neuroprotection
-
Neuhaus O, Archelos JJ, Hartung HP (2003) Immunomodulation in multiple sclerosis: from immunosuppression to neuroprotection. Trends Pharmacol Sci 24(3): 131-1384
-
(2003)
Trends Pharmacol Sci
, vol.24
, Issue.3
, pp. 131-1384
-
-
Neuhaus, O.1
Archelos, J.J.2
Hartung, H.P.3
-
49
-
-
33745826659
-
Small interfering RNA-mediated knockdown of notch ligands in primary CD4+ T cells and dendritic cells enhances cytokine production
-
Stallwood Y, Briend E, Ray KM, Ward GA, Smith BJ, et al. (2006) Small interfering RNA-mediated knockdown of notch ligands in primary CD4+ T cells and dendritic cells enhances cytokine production. J Immunol 177(2): 885-895.
-
(2006)
J Immunol
, vol.177
, Issue.2
, pp. 885-895
-
-
Stallwood, Y.1
Briend, E.2
Ray, K.M.3
Ward, G.A.4
Smith, B.J.5
-
50
-
-
0036799650
-
Multiple sclerosis: Re-expression of a developmental pathway that restricts oligodendrocyte maturation
-
John GR, Shankar SL, Shafit-Zagardo B, Massimi A, Lee SC, et al. (2002) Multiple sclerosis: re-expression of a developmental pathway that restricts oligodendrocyte maturation. Nat Med 8(10): 1115-1121.
-
(2002)
Nat Med
, vol.8
, Issue.10
, pp. 1115-1121
-
-
John, G.R.1
Shankar, S.L.2
Shafit-Zagardo, B.3
Massimi, A.4
Lee, S.C.5
-
51
-
-
28544436950
-
Diagnostic criteria for multiple sclerosis: 2005 revisions to the "McDonald Criteria
-
Polman CH, Reingold SC, Edan G, Filippi M, Hartung HP, et al. (2005) Diagnostic criteria for multiple sclerosis: 2005 revisions to the "McDonald Criteria". Ann Neurol 58(6): 840-846.
-
(2005)
Ann Neurol
, vol.58
, Issue.6
, pp. 840-846
-
-
Polman, C.H.1
Reingold, S.C.2
Edan, G.3
Filippi, M.4
Hartung, H.P.5
-
52
-
-
0037129827
-
Accurate normalization of real time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
RESEARCH0034, Epub 2002 Jun 0018
-
Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, et al. (2002) Accurate normalization of real time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3(7): RESEARCH0034, Epub 2002 Jun 0018.
-
(2002)
Genome Biol
, vol.3
, Issue.7
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
-
53
-
-
0036281211
-
Biotechniques
-
Processing of gene expression data generated by quantitative real-time RT-PCR, 1376
-
Muller PY, Janovjak H, Miserez AR, Dobbie Z (2002) Processing of gene expression data generated by quantitative real-time RT-PCR. Biotechniques 32(6): 1372-1374, 1376, 1378-1379.
-
(2002)
, vol.32
, Issue.6
-
-
Muller, P.Y.1
Janovjak, H.2
Miserez, A.R.3
Dobbie, Z.4
-
54
-
-
33749488893
-
Methylthioadenosine reverses brain autoimmune disease
-
Moreno B, Hevia H, Santamaria M, Sepulcre J, Munoz J, et al. (2006) Methylthioadenosine reverses brain autoimmune disease. AnnNeurol 60: 323-334.
-
(2006)
AnnNeurol
, vol.60
, pp. 323-334
-
-
Moreno, B.1
Hevia, H.2
Santamaria, M.3
Sepulcre, J.4
Munoz, J.5
|