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Volumn , Issue , 2006, Pages 323-332

Bacterial identification based on 16S ribosomal RNA gene sequence analysis

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EID: 43049106917     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/0-387-32892-0_20     Document Type: Chapter
Times cited : (18)

References (38)
  • 1
    • 10744229660 scopus 로고    scopus 로고
    • The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129
    • Cerdeno-Tarraga, A. M., Efstratiou, A., Dover, L. G., et al. (2003). The complete genome sequence and analysis of Corynebacterium diphtheriae NCTC13129. Nucleic Acids Res, 31, 6516-23.
    • (2003) Nucleic Acids Res , vol.31 , pp. 6516-6523
    • Cerdeno-Tarraga, A.M.1    Efstratiou, A.2    Dover, L.G.3
  • 2
    • 5644227319 scopus 로고    scopus 로고
    • Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
    • Clarridge, J. E. III. (2004). Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin Microbiol Rev. 17, 840-62.
    • (2004) Clin Microbiol Rev. , vol.17 , pp. 840-862
    • Clarridge III, J.E.1
  • 3
    • 0036708343 scopus 로고    scopus 로고
    • Genotypic diversity of clinical Actinomyces species: Phenotype, source, and disease correlation among genospecies
    • Clarridge, J. E. III, & Zhang, Q. (2002). Genotypic diversity of clinical Actinomyces species: phenotype, source, and disease correlation among genospecies. J Clin Microbiol, 40, 3442-8.
    • (2002) J Clin Microbiol , vol.40 , pp. 3442-3448
    • Clarridge III, J.E.1    Zhang, Q.2
  • 4
    • 0032508046 scopus 로고    scopus 로고
    • Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    • Cole, S. T., Brosch, R., Parkhill, J., et al. (1998). Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature, 393, 537-44
    • (1998) Nature , vol.393 , pp. 537-544
    • Cole, S.T.1    Brosch, R.2    Parkhill, J.3
  • 5
    • 84900758635 scopus 로고    scopus 로고
    • Erratum
    • Erratum: Nature, 396, 190.
    • Nature , vol.396 , pp. 190
  • 6
    • 0033775331 scopus 로고    scopus 로고
    • 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates
    • Drancourt, M., Bollet, C., Carlioz, A., Martelin, R., Gayral, J. P., & Raoult, D. (2000). 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates. J Clin Microbiol, 38, 3623-30.
    • (2000) J Clin Microbiol , vol.38 , pp. 3623-3630
    • Drancourt, M.1    Bollet, C.2    Carlioz, A.3    Martelin, R.4    Gayral, J.P.5    Raoult, D.6
  • 7
    • 0015446461 scopus 로고
    • The determination of the primary structure of the 16S ribosomal RNA of Escherichia coli. 2. Nucleotide sequences of products from partial enzymatic hydrolysis
    • Ehresmann, C., Stiegler, P., Fellner, P. & Ebel, J. P. (1972). The determination of the primary structure of the 16S ribosomal RNA of Escherichia coli. 2. Nucleotide sequences of products from partial enzymatic hydrolysis. Biochimie, 54, 901-67.
    • (1972) Biochimie , vol.54 , pp. 901-967
    • Ehresmann, C.1    Stiegler, P.2    Fellner, P.3    Ebel, J.P.4
  • 8
    • 0029653518 scopus 로고
    • Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
    • Fleischmann, R. D., Adams, M. D., White, O., et al. (1995). Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science, 269, 496-512.
    • (1995) Science , vol.269 , pp. 496-512
    • Fleischmann, R.D.1    Adams, M.D.2    White, O.3
  • 10
    • 15444350252 scopus 로고    scopus 로고
    • The complete genome sequence of Escherichia coli K-12
    • Frederick, R. B., Plunkett, G.III., Bloch, C.A., etal. (1997). The complete genome sequence of Escherichia coli K-12. Science, 277, 1453-74.
    • (1997) Science , vol.277 , pp. 1453-1474
    • Frederick, R.B.1    Plunkett III, G.2
  • 11
    • 0030060689 scopus 로고    scopus 로고
    • Sequence-based identification of microbial pathogens: A reconsideration of Koch's postulates
    • Fredericks, D. N., & Relman, D. A. (1996). Sequence-based identification of microbial pathogens: a reconsideration of Koch's postulates. Clin Microbiol Rev, 9, 18-33.
    • (1996) Clin Microbiol Rev , vol.9 , pp. 18-33
    • Fredericks, D.N.1    Relman, D.A.2
  • 12
    • 0028044921 scopus 로고
    • PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid
    • Greisen, K., Loeffelholz, M., Purohit, A., & Leong, D. (1994). PCR primers and probes for the 16S rRNA gene of most species of pathogenic bacteria, including bacteria found in cerebrospinal fluid. J Clin Microbiol, 32, 335-51.
    • (1994) J Clin Microbiol , vol.32 , pp. 335-351
    • Greisen, K.1    Loeffelholz, M.2    Purohit, A.3    Leong, D.4
  • 13
    • 0036834706 scopus 로고    scopus 로고
    • Rapid and accurate identification of mycobacteria by sequencing hypervariable regions of the 16S ribosomal RNA gene
    • Han, X. Y., Pham, A. S., Tarrand, J. J., Sood, P. K., & Luthra, R. (2002). Rapid and accurate identification of mycobacteria by sequencing hypervariable regions of the 16S ribosomal RNA gene. Am J Clin Pathol, 118, 796-801.
    • (2002) Am J Clin Pathol , vol.118 , pp. 796-801
    • Han, X.Y.1    Pham, A.S.2    Tarrand, J.J.3    Sood, P.K.4    Luthra, R.5
  • 14
    • 85047688484 scopus 로고    scopus 로고
    • Bacteriologic characterization of 36 strains of Roseomonas species and proposal of Roseomonas mucosa sp. nov. and Roseomonas gilardii subsp. rosea subsp. nov
    • Han, X.Y., Pham, A. S., Tarrand, J. J., Rolston, K. V., Helsel, L. O., & Levett, P. N. (2003). Bacteriologic characterization of 36 strains of Roseomonas species and proposal of Roseomonas mucosa sp. nov. and Roseomonas gilardii subsp. rosea subsp. nov. Am J Clin Pathol, 120, 256-64.
    • (2003) Am J Clin Pathol , vol.120 , pp. 256-264
    • Han, X.Y.1    Pham, A.S.2    Tarrand, J.J.3    Rolston, K.V.4    Helsel, L.O.5    Levett, P.N.6
  • 15
    • 1642338578 scopus 로고    scopus 로고
    • Moraxella osloensis blood and catheter infections during anticancer chemotherapy: Clinical and microbiological studies of 10 cases
    • Han, X. Y., & Tarrand, J. J. (2004). Moraxella osloensis blood and catheter infections during anticancer chemotherapy: clinical and microbiological studies of 10 cases. Am J Clin Pathol, 121, 581-8.
    • (2004) Am J Clin Pathol , vol.121 , pp. 581-588
    • Han, X.Y.1    Tarrand, J.J.2
  • 16
    • 9744281834 scopus 로고    scopus 로고
    • Francisella tularensis subsp. holarctica peritonitis in a patient with stomach cancer
    • Han, X. Y., Ho, L. X., & Safdar, A. (2004a). Francisella tularensis subsp. holarctica peritonitis in a patient with stomach cancer. Emerg Infect Dis, 10, 2238-40.
    • (2004) Emerg Infect Dis , vol.10 , pp. 2238-2240
    • Han, X.Y.1    Ho, L.X.2    Safdar, A.3
  • 17
    • 1942532135 scopus 로고    scopus 로고
    • Endocarditis with ruptured cerebral aneurysm caused by Cardiobacterium valvarum sp. nov
    • Han, X. Y., Meltzer, M. C., Woods, J. T., & Fainstein, V. (2004b). Endocarditis with ruptured cerebral aneurysm caused by Cardiobacterium valvarum sp. nov. J Clin Microbiol, 42, 1590-5.
    • (2004) J Clin Microbiol , vol.42 , pp. 1590-1595
    • Han, X.Y.1    Meltzer, M.C.2    Woods, J.T.3    Fainstein, V.4
  • 18
    • 17144462135 scopus 로고    scopus 로고
    • DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
    • Heidelberg, J. F., Eisen, J. A., Nelson, W. C., et al. (2000). DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature, 406, 477-83.
    • (2000) Nature , vol.406 , pp. 477-483
    • Heidelberg, J.F.1    Eisen, J.A.2    Nelson, W.C.3
  • 19
  • 20
    • 0032930929 scopus 로고    scopus 로고
    • Identification of clinical isolates of Mycobacterium spp. by sequence analysis of the 16S ribosomal RNA gene. Experience from a clinical laboratory
    • Holberg-Petersen, M., Steinbakk, M., Figenschau, K. J., Jantzen, E., Eng, J., & Melby, K. K. (1999). Identification of clinical isolates of Mycobacterium spp. by sequence analysis of the 16S ribosomal RNA gene. Experience from a clinical laboratory. APMIS, 107, 231-9.
    • (1999) APMIS , vol.107 , pp. 231-239
    • Holberg-Petersen, M.1    Steinbakk, M.2    Figenschau, K.J.3    Jantzen, E.4    Eng, J.5    Melby, K.K.6
  • 21
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz, P., Goebel, B. M., & Pace, N. R. (1998). Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J Bacteriol, 180, 4765-74.
    • (1998) J Bacteriol , vol.180 , pp. 4765-4774
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 22
    • 0038752612 scopus 로고    scopus 로고
    • Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis
    • Ivanova, N., Sorokin, A., Anderson, I., et al. (2003). Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis. Nature, 423, 87-91.
    • (2003) Nature , vol.423 , pp. 87-91
    • Ivanova, N.1    Sorokin, A.2    Anderson, I.3
  • 23
    • 0033151643 scopus 로고    scopus 로고
    • Ribosomal DNA sequencing as a tool for identification of bacterial pathogens
    • Kolbert, C. P., & Persing, D. H. (1999). Ribosomal DNA sequencing as a tool for identification of bacterial pathogens. Curr Opin Microbiol, 2, 299-305.
    • (1999) Curr Opin Microbiol , vol.2 , pp. 299-305
    • Kolbert, C.P.1    Persing, D.H.2
  • 25
    • 0033989458 scopus 로고    scopus 로고
    • Sequence-based identification of Mycobacterium species using the Microseq 500 16S rDNA bacterial identification system
    • Patel, J. B., Leonard, D. G., Pan, X., Musser, J. M., Berman, R. E., & Nachamkin, I. (2000). Sequence-based identification of Mycobacterium species using the Microseq 500 16S rDNA bacterial identification system. J Clin Microbiol, 38, 246-51.
    • (2000) J Clin Microbiol , vol.38 , pp. 246-251
    • Patel, J.B.1    Leonard, D.G.2    Pan, X.3    Musser, J.M.4    Berman, R.E.5    Nachamkin, I.6
  • 27
    • 0026500582 scopus 로고
    • Characterization of a novel Rochalimaea species, R. henselae sp. nov., isolated from blood of a febrile, human immunodeficiency virus-positive patient
    • Regnery, R. L., Anderson, B. E., Clarridge, J. E. 3rd, Rodriguez-Barradas, M. C., Jones, D. C., & Carr, J. H. (1992). Characterization of a novel Rochalimaea species, R. henselae sp. nov., isolated from blood of a febrile, human immunodeficiency virus-positive patient. J Clin Microbiol, 30, 265-74.
    • (1992) J Clin Microbiol , vol.30 , pp. 265-274
    • Regnery, R.L.1    Anderson, B.E.2    Rodriguez-Barradas, M.C.3    Jones, D.C.4    Carr, J.H.5
  • 28
    • 0025258967 scopus 로고
    • The agent of bacillary angiomatosis. An approach to the identification of uncultured pathogens
    • Relman, D.A., Loutit, J.S., Schmidt, T.M., Falkow, S., & Tompkins, L.S.(1990). The agent of bacillary angiomatosis. An approach to the identification of uncultured pathogens. N Engl J Med, 323, 1573-80.
    • (1990) N Engl J Med , vol.323 , pp. 1573-1580
    • Relman, D.A.1    Loutit, J.S.2    Schmidt, T.M.3    Falkow, S.4    Tompkins, L.S.5
  • 29
    • 0026632826 scopus 로고
    • Identification of the uncultured bacillus of Whipple's disease
    • Relman, D. A., Schmidt, T. M., Macdermott, R. P., & Falkow, S. (1992). Identification of the uncultured bacillus of Whipple's disease. N Engl J Med, 327, 293-301.
    • (1992) N Engl J Med , vol.327 , pp. 293-301
    • Relman, D.A.1    Schmidt, T.M.2    Macdermott, R.P.3    Falkow, S.4
  • 30
    • 0033591293 scopus 로고    scopus 로고
    • The search for unrecognized pathogens
    • Relman, D. A. (1999). The search for unrecognized pathogens. Science, 284, 1308-10.
    • (1999) Science , vol.284 , pp. 1308-1310
    • Relman, D.A.1
  • 32
    • 0025005094 scopus 로고
    • Differentiation of Mycobacterium species by direct sequencing of amplified DNA
    • Rogall, T., Flohr, T., & Bottger, E. C. (1990). Differentiation of Mycobacterium species by direct sequencing of amplified DNA. J Gen Microbiol, 136, 1915-20.
    • (1990) J Gen Microbiol , vol.136 , pp. 1915-1920
    • Rogall, T.1    Flohr, T.2    Bottger, E.C.3
  • 35
    • 0035919670 scopus 로고    scopus 로고
    • Complete genome sequence of a virulent isolate of Streptococcus pneumoniae
    • Tettelin, H., Nelson, K. E., Paulsen, I. T., et al. (2001). Complete genome sequence of a virulent isolate of Streptococcus pneumoniae. Science, 293, 498-506.
    • (2001) Science , vol.293 , pp. 498-506
    • Tettelin, H.1    Nelson, K.E.2    Paulsen, I.T.3
  • 36
    • 0030835739 scopus 로고    scopus 로고
    • The complete genome sequence of the gastric pathogen Helicobacter pylori
    • Tomb, J. F., White, O., Kerlavage, A. R., et al. (1997). The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature, 388, 539-47.
    • (1997) Nature , vol.388 , pp. 539-547
    • Tomb, J.F.1    White, O.2    Kerlavage, A.R.3
  • 38
    • 0034798093 scopus 로고    scopus 로고
    • Necessity of quality-controlled 16S rRNA gene sequence databases: Identifying nontuberculousMycobacteriumspecies
    • Turenne, C. Y., Tschetter, L., Wolfe, J., & Kabani, A. (2001). Necessity of quality-controlled 16S rRNA gene sequence databases: identifying nontuberculousMycobacteriumspecies. J Clin Microbiol, 39, 3637-48.
    • (2001) J Clin Microbiol , vol.39 , pp. 3637-3648
    • Turenne, C.Y.1    Tschetter, L.2    Wolfe, J.3    Kabani, A.4


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