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Volumn 38, Issue 1, 2000, Pages 246-251

Sequence-based identification of Mycobacterium species using the MicroSeq 500 16S rDNA bacterial identification system

Author keywords

[No Author keywords available]

Indexed keywords

HEAT SHOCK PROTEIN 65; MYCOLIC ACID; RIBOSOME DNA; RIBOSOME RNA;

EID: 0033989458     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (163)

References (40)
  • 1
    • 0022631997 scopus 로고
    • High-performance liquid chromatography of mycolic acids as a tool in the identification of Corynebacterium, Nocardia, Rhodococcus, and Mycobacterium species
    • Butler, W. R., D. G. Ahearn, and J. O. Kilburn. 1986. High-performance liquid chromatography of mycolic acids as a tool in the identification of Corynebacterium, Nocardia, Rhodococcus, and Mycobacterium species. J. Clin. Microbiol. 23:182-185.
    • (1986) J. Clin. Microbiol. , vol.23 , pp. 182-185
    • Butler, W.R.1    Ahearn, D.G.2    Kilburn, J.O.3
  • 2
    • 0030783078 scopus 로고    scopus 로고
    • Rapid identification of mycobacteria to species level by PCR-restriction fragment length polymorphism analysis of the hsp65 gene and proposition of an algorithm to differentiate 34 mycobacterial species
    • Devallois, A., K. S. Goh, and N. Rastogi. 1997. Rapid identification of mycobacteria to species level by PCR-restriction fragment length polymorphism analysis of the hsp65 gene and proposition of an algorithm to differentiate 34 mycobacterial species. J. Clin. Microbiol. 35:2969-2973.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 2969-2973
    • Devallois, A.1    Goh, K.S.2    Rastogi, N.3
  • 3
    • 0026601639 scopus 로고
    • DNA amplification and reverse dot blot hybridization for detection and identification of mycobacteria to the species level in the clinical laboratory
    • Fiss, E. H., F. F. Chehab, and G. F. Brooks. 1992. DNA amplification and reverse dot blot hybridization for detection and identification of mycobacteria to the species level in the clinical laboratory. J. Clin. Microbiol. 30: 1220-1224.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 1220-1224
    • Fiss, E.H.1    Chehab, F.F.2    Brooks, G.F.3
  • 6
    • 0027420847 scopus 로고
    • Identification of mycobacteria from animals by restriction enzyme analysis and direct DNA cycle sequencing of polymerase chain reaction-amplified 16S rRNA gene sequences
    • Hughes, M. S., R. A. Skuce, L. A. Beck, and S. D. Neill. 1993. Identification of mycobacteria from animals by restriction enzyme analysis and direct DNA cycle sequencing of polymerase chain reaction-amplified 16S rRNA gene sequences. J. Clin. Microbiol. 31:3216-3222.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 3216-3222
    • Hughes, M.S.1    Skuce, R.A.2    Beck, L.A.3    Neill, S.D.4
  • 8
    • 0026524473 scopus 로고
    • Microheterogeneity within rRNA of Mycobacterium gordonae
    • Kirschner, P., and E. C. Bottger. 1992. Microheterogeneity within rRNA of Mycobacterium gordonae. J. Clin. Microbiol. 30:1049-1050.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 1049-1050
    • Kirschner, P.1    Bottger, E.C.2
  • 9
    • 0027451410 scopus 로고
    • Genotypic identification of mycobacteria by nucleic acid sequence determination: Report of a 2-year experience in a clinical laboratory
    • Kirschner, P., B. Springer, U. Vogel, A. Meier, A. Wrede, M. Kiekenbeck, F. C. Bange, and E. C. Bottger. 1993. Genotypic identification of mycobacteria by nucleic acid sequence determination: report of a 2-year experience in a clinical laboratory. J. Clin. Microbiol. 31:2882-2889.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 2882-2889
    • Kirschner, P.1    Springer, B.2    Vogel, U.3    Meier, A.4    Wrede, A.5    Kiekenbeck, M.6    Bange, F.C.7    Bottger, E.C.8
  • 10
    • 0002692105 scopus 로고    scopus 로고
    • Mycobacteria
    • E. W. Koneman, S. D. Allen, W. M. Janda, P. C. Schreckenberger, Jr., and W. C. Winn (ed.). Lippincott-Raven Publishers, Philadelphia, Pa.
    • Koneman, E. W., S. D. Allen, W. M. Janda, P. C. Schreckenberger, Jr., and W. C. Winn (ed.). 1997. Mycobacteria, p. 893-952. In E. W. Koneman, S. D. Allen, W. M. Janda, P. C. Schreckenberger, Jr., and W. C. Winn (ed.), Color atlas and textbook of diagnostic microbiology. Lippincott-Raven Publishers, Philadelphia, Pa.
    • (1997) Color Atlas and Textbook of Diagnostic Microbiology , pp. 893-952
    • Koneman, E.W.1    Allen, S.D.2    Janda, W.M.3    Schreckenberger P.C., Jr.4    Winn, W.C.5
  • 11
    • 0028840458 scopus 로고
    • PCR assay based on DNA coding for 16S rRNA for detection and identification of mycobacteria in clinical samples
    • Kox, L. F., J. van Leeuwen, S. Knijper, H. M. Jansen, and A. H. Kolk. 1995. PCR assay based on DNA coding for 16S rRNA for detection and identification of mycobacteria in clinical samples. J. Clin. Microbiol. 33:3225-3233.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 3225-3233
    • Kox, L.F.1    Van Leeuwen, J.2    Knijper, S.3    Jansen, H.M.4    Kolk, A.H.5
  • 12
    • 0026533758 scopus 로고
    • Proposal of Mycobacterium peregrinum sp. nov., nom. rev., and elevation of Mycobacterium chelonae subsp. abscessus (Kubica et al.) to species status: Mycobacterium abscessus comb. nov.
    • Kusunoki, S., and T. Ezaki. 1992. Proposal of Mycobacterium peregrinum sp. nov., nom. rev., and elevation of Mycobacterium chelonae subsp. abscessus (Kubica et al.) to species status: Mycobacterium abscessus comb. nov. Int. J. Syst. Bacteriol. 42:240-245.
    • (1992) Int. J. Syst. Bacteriol. , vol.42 , pp. 240-245
    • Kusunoki, S.1    Ezaki, T.2
  • 14
    • 0002920088 scopus 로고
    • Mycobacterium
    • P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken (ed.). ASM Press, Washington, D.C.
    • Metchock, B. G., F. S. Nolte, and R. J. Wallace. 1995. Mycobacterium, p. 399-437. In P. R. Murray, E. J. Baron, M. A. Pfaller, F. C. Tenover, and R. H. Yolken (ed.), Manual of clinical microbiology. ASM Press, Washington, D.C.
    • (1995) Manual of Clinical Microbiology , pp. 399-437
    • Metchock, B.G.1    Nolte, F.S.2    Wallace, R.J.3
  • 15
    • 0030893650 scopus 로고    scopus 로고
    • Detection of resistance to isoniazid, rifampin, and streptomycin in clinical isolates of Mycobacterium tuberculosis by molecular methods
    • Nachamkin, I., C. Kang, and M. P. Weinstein. 1997. Detection of resistance to isoniazid, rifampin, and streptomycin in clinical isolates of Mycobacterium tuberculosis by molecular methods. Clin. Infect. Dis. 24:894-900.
    • (1997) Clin. Infect. Dis. , vol.24 , pp. 894-900
    • Nachamkin, I.1    Kang, C.2    Weinstein, M.P.3
  • 16
    • 0030741352 scopus 로고    scopus 로고
    • Routine rapid Mycobacterium species assignment based on species-specific allelic variation in the 65-kilodalton heat shock protein gene (hsp65)
    • Pai, S., N. Esen, X. Pan, and J. M. Musser. 1997. Routine rapid Mycobacterium species assignment based on species-specific allelic variation in the 65-kilodalton heat shock protein gene (hsp65). Arch. Pathol. Lab. Med. 121:859-864.
    • (1997) Arch. Pathol. Lab. Med. , vol.121 , pp. 859-864
    • Pai, S.1    Esen, N.2    Pan, X.3    Musser, J.M.4
  • 17
    • 0030793677 scopus 로고    scopus 로고
    • PCR-enzyme-linked immunosorbent assay and partial rRNA gene sequencing: A rational approach to identifying mycobacteria
    • Patel, S., M. Yates, and N. A. Saunders. 1997. PCR-enzyme-linked immunosorbent assay and partial rRNA gene sequencing: a rational approach to identifying mycobacteria. J. Clin. Microbiol. 35:2375-2380.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 2375-2380
    • Patel, S.1    Yates, M.2    Saunders, N.A.3
  • 18
    • 0026639504 scopus 로고
    • Differentiation of slowly growing Mycobacterium species, including Mycobacterium tuberculosis, by gene amplification and restriction fragment length polymorphism analysis
    • Plikaytis, B. B., B. D. Plikaytis, M. A. Yakrus, W. R. Butler, C. L. Woodley, V. A. Silcox, and T. M. Shinnick. 1992. Differentiation of slowly growing Mycobacterium species, including Mycobacterium tuberculosis, by gene amplification and restriction fragment length polymorphism analysis. J. Clin. Microbiol. 30:1815-1822.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 1815-1822
    • Plikaytis, B.B.1    Plikaytis, B.D.2    Yakrus, M.A.3    Butler, W.R.4    Woodley, C.L.5    Silcox, V.A.6    Shinnick, T.M.7
  • 20
    • 0025005094 scopus 로고
    • Differentiation of Mycobacterium species by direct sequencing of amplified DNA
    • Rogall, T., T. Flohr, and E. C. Bottger. 1990. Differentiation of Mycobacterium species by direct sequencing of amplified DNA. J. Gen. Microbiol. 136:1915-1920.
    • (1990) J. Gen. Microbiol. , vol.136 , pp. 1915-1920
    • Rogall, T.1    Flohr, T.2    Bottger, E.C.3
  • 21
    • 0025013355 scopus 로고
    • Towards a phylogeny and definition of species at the molecular level within the genus Mycobacterium
    • Rogall, T., J. Wolters, T. Flohr, and E. C. Bottger. 1990. Towards a phylogeny and definition of species at the molecular level within the genus Mycobacterium. Int. J. Syst. Bacteriol. 40:323-330.
    • (1990) Int. J. Syst. Bacteriol. , vol.40 , pp. 323-330
    • Rogall, T.1    Wolters, J.2    Flohr, T.3    Bottger, E.C.4
  • 22
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic Trees. Mol. Biol. Evol. 4:406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 0030758758 scopus 로고    scopus 로고
    • Diagnosis and treatment of disease caused by nontuberculous mycobacteria
    • Scientific Assembly on Microbiology, Tuberculosis, and Pulmonary Infections, American Thoracic Society. 1997. Diagnosis and treatment of disease caused by nontuberculous mycobacteria. Am. J. Respir. Crit. Care Med. 156:S1-S25.
    • (1997) Am. J. Respir. Crit. Care Med. , vol.156
  • 27
    • 0028916737 scopus 로고
    • Phylogeny of the Mycobacterium chelonae-like organism based on partial sequencing of the 16S rRNA gene and proposal of Mycobacterium mucogenicum sp. nov.
    • Springer, B., E. C. Bottger, P. Kirschner, and R. J. Wallace, Jr. 1995. Phylogeny of the Mycobacterium chelonae-like organism based on partial sequencing of the 16S rRNA gene and proposal of Mycobacterium mucogenicum sp. nov. Int. J. Syst. Bacteriol. 45:262-267.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 262-267
    • Springer, B.1    Bottger, E.C.2    Kirschner, P.3    Wallace R.J., Jr.4
  • 28
    • 0030046515 scopus 로고    scopus 로고
    • Two-laboratory collaborative study on identification of mycobacteria: Molecular versus phenotypic methods
    • Springer, B., L. Stockman, K. Teschner, G. D. Roberts, and E. C. Bottger. 1996. Two-laboratory collaborative study on identification of mycobacteria: molecular versus phenotypic methods. J. Clin. Microbiol. 34:296-303.
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 296-303
    • Springer, B.1    Stockman, L.2    Teschner, K.3    Roberts, G.D.4    Bottger, E.C.5
  • 29
    • 0020318936 scopus 로고
    • Rapidly growing mycobacteria: Testing of susceptibility to 34 antimicrobial agents by broth microdilution
    • Swenson, J. M., C. Thornsberry, and V. A. Silcox. 1982. Rapidly growing mycobacteria: testing of susceptibility to 34 antimicrobial agents by broth microdilution. Antimicrob. Agents Chemother. 22:186-192.
    • (1982) Antimicrob. Agents Chemother. , vol.22 , pp. 186-192
    • Swenson, J.M.1    Thornsberry, C.2    Silcox, V.A.3
  • 30
    • 0022355533 scopus 로고
    • Antimicrobial susceptibility of five subgroups of Mycobacterium fortuitum and Mycobacterium chelonae
    • Swenson, J. M., R. J. Wallace, Jr., V. A. Silcox, and C. Thornsberry. 1985. Antimicrobial susceptibility of five subgroups of Mycobacterium fortuitum and Mycobacterium chelonae. Antimicrob. Agents Chemother. 28:807-811.
    • (1985) Antimicrob. Agents Chemother. , vol.28 , pp. 807-811
    • Swenson, J.M.1    Wallace R.J., Jr.2    Silcox, V.A.3    Thornsberry, C.4
  • 31
    • 0031784307 scopus 로고    scopus 로고
    • Comparison of phenotypic and genotypic techniques for identification of unusual aerobic pathogenic gram-negative bacilli
    • Tang, Y. W., N. M. Ellis, M. K. Hopkins, D. H. Smith, D. E. Dodge, and D. H. Persing. 1998. Comparison of phenotypic and genotypic techniques for identification of unusual aerobic pathogenic gram-negative bacilli. J. Clin. Microbiol. 36:3674-3679.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 3674-3679
    • Tang, Y.W.1    Ellis, N.M.2    Hopkins, M.K.3    Smith, D.H.4    Dodge, D.E.5    Persing, D.H.6
  • 32
    • 0027514742 scopus 로고
    • Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis
    • Telenti, A., F. Marchesi, M. Balz, F. Bally, E. C. Bottger, and T. Bodmer. 1993. Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis. J. Clin. Microbiol. 31:175-178.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 175-178
    • Telenti, A.1    Marchesi, F.2    Balz, M.3    Bally, F.4    Bottger, E.C.5    Bodmer, T.6
  • 36
    • 0025101257 scopus 로고
    • Activities of ciprofloxacin and ofloxacin against rapidly growing mycobacteria with demonstration of acquired resistance following single-drug therapy
    • Wallace, R. J., Jr., G. Bedsole, G. Sumter, C. V. Sanders, L. C. Steele, B. A. Brown, J. Smith, and D. R. Graham. 1990. Activities of ciprofloxacin and ofloxacin against rapidly growing mycobacteria with demonstration of acquired resistance following single-drug therapy. Antimicrob. Agents Chemother. 34:65-70.
    • (1990) Antimicrob. Agents Chemother. , vol.34 , pp. 65-70
    • Wallace R.J., Jr.1    Bedsole, G.2    Sumter, G.3    Sanders, C.V.4    Steele, L.C.5    Brown, B.A.6    Smith, J.7    Graham, D.R.8
  • 37
    • 0025753436 scopus 로고
    • Susceptibilities of Mycobacterium fortuitum biovar. fortuitum and the two subgroups of Mycobacterium chelonae to imipenem, cefmetazole, cefaxitin, and amoxicillin-clavulanic acid
    • Wallace, R. J., Jr., B. A. Brown, and G. O. Onyi. 1991. Susceptibilities of Mycobacterium fortuitum biovar. fortuitum and the two subgroups of Mycobacterium chelonae to imipenem, cefmetazole, cefaxitin, and amoxicillin-clavulanic acid. Antimicrob. Agents Chemother. 35:773-775.
    • (1991) Antimicrob. Agents Chemother. , vol.35 , pp. 773-775
    • Wallace R.J., Jr.1    Brown, B.A.2    Onyi, G.O.3
  • 38
    • 0026770337 scopus 로고
    • Skin, soft tissue, and bone infections due to Mycobacterium chelonae chelonae: Importance of prior coricosteroid therapy, frequency of disseminated infections, and resistance to oral antimicrobials other than clarithromycin
    • Wallace, R. J., Jr., B. A. Brown, and G. O. Onyi. 1992. Skin, soft tissue, and bone infections due to Mycobacterium chelonae chelonae: importance of prior coricosteroid therapy, frequency of disseminated infections, and resistance to oral antimicrobials other than clarithromycin. J. Infect. Dis. 166: 405-412.
    • (1992) J. Infect. Dis. , vol.166 , pp. 405-412
    • Wallace R.J., Jr.1    Brown, B.A.2    Onyi, G.O.3
  • 39
    • 0027362899 scopus 로고
    • Clinical significance, biochemical features, and susceptibility patterns of sporadic isolates of the Mycobacterium chelonae-like organism
    • Wallace, R. J., Jr., V. A. Silcox, M. Tsukamura, B. A. Brown, J. O. Kilburn, W. R. Butler, and G. Onyi. 1993. Clinical significance, biochemical features, and susceptibility patterns of sporadic isolates of the Mycobacterium chelonae-like organism. J. Clin. Microbiol. 31:3231-3239.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 3231-3239
    • Wallace R.J., Jr.1    Silcox, V.A.2    Tsukamura, M.3    Brown, B.A.4    Kilburn, J.O.5    Butler, W.R.6    Onyi, G.7


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