Complete sequence analysis of the genome of the bacterium Mycoplasma pneumoniae

Nucleic Acids Research

Volumn 24, Issue 22, 1996, Pages 4420-4449

  Himmelreich, Ralf ^a   Hubert, Helmut ^a,b   Plagens, Helga ^a   Pirkl, Elsbeth ^a   Li, Bi Chen ^a,c   Herrmann, Richard ^a  

^a UNIVERSITY OF HEIDELBERG   (Germany)

^b QIAGEN GMBH   (Germany)

^c GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; BACTERIAL RNA;

AMINO ACID SYNTHESIS; ARTICLE; BACTERIAL METABOLISM; CHEMOTAXIS; DATA BASE; EVOLUTION; GENE SEQUENCE; MYCOPLASMA PNEUMONIAE; NONHUMAN; OPEN READING FRAME; OXIDATIVE STRESS; PARASITE; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

BASE SEQUENCE; DNA REPAIR; DNA REPLICATION; DNA, BACTERIAL; GENE EXPRESSION REGULATION, BACTERIAL; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; MYCOPLASMA PNEUMONIAE; OPEN READING FRAMES; PROTEIN BIOSYNTHESIS; TRANSCRIPTION, GENETIC;

BACTERIA (MICROORGANISMS); MYCOPLASMA PNEUMONIAE;

EID: 10544255079     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/24.22.4420     Document Type: Article

References (67)

1. Chanock, R. M., Dienes, L., Eaton, M. D., Edward, D. G., Freundt, E. A., Hayflick, L., Hers, J. F. P., Jensen, K. E., Liu, C., Marmion, B. P., Morton, H. E., Mufson, M. A., Smith, P. F., Somerson, N. L. and Taylor-Robinson, D. (1963) Science, 140, 662.
2. Krause, D. C. (1996) Mol. Microbiol., 20, 247-253.
3. Jacobs, E. (1991) Rev. Med. Microbiol., 2, 83-90.
4. Dybvig, K. (1990) Annu. Rev. Microbiol., 44, 81-104.
5. Morowitz, H. J. (1984) Isr. J. Med. Sci., 20, 750-753.
6. Razin, S. (1992) FEMS Microbiol Lett, 100, 423-431.
7. Bove, J. M. (1993) Clin. Infect. Dis., 17 Suppl 1, 10-31
8. Peterson, S. N., Hu, P. C., Bott, K. F. and Hutchison, C. A. d. (1993) J. Bacteriol., 175, 7918-7930
9. Fraser, C. M., Gocayne, J. D., White, O., Adams, M. D., Clayton, R. A., Fleischmann, R. D., Bult, C. J., Kerlavage, A. R., Sutton, G., Kelley, J. M. et al. (1995) Science, 270, 397-403.
10. Hilbert, H., Himmelreich, R., Plagens, H. and Hermann, R. (1996) Nucleic Acids Res., 24, 628-639.
11. Bork, P., Ouzounis, C., Casari, G., Schneider, R., Sander, C., Dolan, M., Gilbert, W. and Gillevet, P. M. (1995) Mol. Microbiol., 16, 955-967
12. Sterky, F., Holmberg, A. and Uhlen, M. (1996) HUGO'96, Heidelberg, Germany.
13. Glass, J. L., Glass, J. S., Lefkowitz, E. J., Chen, E. Y. and Cassel, G. H. (1996) IOM Letters, USA, Vol. 4, pp. 12., Proc. Meet. Int. Org. Mycoplasm., Orlando, Florida.
14. Inamine, J. M., Loechel, S. and Hu, P. C. (1988) Gene, 73, 175-183.
15. Wenzel, R. and Herrmann, R. (1989) Nucleic Acids Res., 17, 7029-7043.
16. Su, C. J., Chavoya, A. and Baseman, J. B. (1988) Infect Immunol., 56, 3157-3161.
17. Almagor, M., Yatziv, S. and Kahane, I. (1983) Infect. Immunol., 41, 251-256.
18. Sanger, F., Nicklen, R. and Coulson, A. R. (1977) Proc. Natl Acad. Sci. USA, 79, 5463-5467.
19. Bairoch, A. and Boeckmann, B. (1991) Nucleic Acids Res., 19, 2247-2249.
20. Barker, W. C., George, D. G., Mewes, H.-W., Pfeiffer, F. and Tsugita, A. (1993) Nucleic Acids Res., 21, 3089-3092.
21. Pearson, W. R. and Lipman, D. J. (1988) Proc. Natl Acad. Sci. USA, 85, 2444-2448.
22. Altschul, S., Gish, W., Miller, W., Myers, E. and Lipman, D. (1990) J. Mol. Biol., 215, 403-410.
23. Bairoch, A. (1992) Nucleic Acids Res., 20, 2013-2018.
24. Inamine, J. M., Ho, K. C., Loechel, S. and Hu, P. C. (1990) J. Bacteriol., 172, 504-506.
25. Nakai, K. and Kanehisa, M. (1991) Proteins: Struct., Funct. Genet., 11, 95-110.
26. Proft, T. and Herrmann, R. (1994) Mol. Microbiol., 13, 337-348.
27. Proft, T., Hilbert, H., Layh Schmitt, G. and Herrmann, R. (1995) J. Bacteriol., 177, 3370-3378.
28. Razin, S. and Jacobs, E. (1992b) J. Gen. Microbiol., 138, 407-422.
29. Ruland, K., Wenzel, R. and Hermann, R. (1990) Nucleic Acids Res., 18, 6311-6317.
30. Fleischmann, R. D., Adams, M. D., White, O., Clayton, R. A., Kirkness, E. F., Kerlavage, A. R., Bult, C. J., Tomb, J. F., Dougherty, B. A., Merrick, J. M. et al. (1995) Science, 269, 496-512.
31. Riley, M. (1993) Microbiol Rev., 57, 862-952.
32. Baker, T. A. and Wickner, S. H. (1992) Annu. Rev. Genet., 26, 447-477.
33. Mills, L. B., Stanbridge, E. J., Sedwick, W. D. and Korn, D. (1977) J. Bacteriol., 132, 641-649.
34. Barnes, M. H., Tarantino, P. M., Jr., Spacciapoli, P., Brown, N. C., Yu, H. and Dybvig, K. (1994) Mol. Microbiol., 13, 843-54
35. Koonin, E. V. and Bork, P. (1996) Trends Biochem. Sci., 21, 128-129.
36. Camerini-Otero, R. D. and Hsieh, P. (1995) Annu. Rev. Genet., 29, 509-552.
37. Demple, B. and Harrison, L. (1994) Annu. Rev. Biochem., 63, 915-948.
38. Sancar, A. and Sancar, G. B. (1988) Annu. Rev. Biochem., 57, 29-67.
39. Haldenwang, W. G. (1995) Microbiol. Rev., 59, 1-30
40. Hyman, H. C., Gafny, R., Glaser, G. and Razin, S. (1988) J. Bacteriol., 170, 3262-3268.
41. Moran, C. P. j., Lang, N., LeGrice, S. F. J., Lee, G., Stephens, M., Sonnenshein, A. L., Pero, J. and Losik, R. (1982) Mol. Gen. Genet., 186, 339-346.
42. Das, A. (1993) Annu. Rev. Biochem., 62, 893-930.
43. Hecker, M., Schumann, W. and Voelker, U. (1996) Mol. Microbiol., 19, 417-428.
44. Parkinson, J. S. (1993) Cell, 73, 857-871.
45. Simoneau, P., Li, C. M., Loechel, S., Wenzel, R., Herrmann, R. and Hu, P. C. (1993) Nucleic Acids Res, 21, 4967-4974.
46. Breton, R., Watson, D., Yaguchi, M. and Lapointe, J. (1990) J. Biol. Chem., 265, 18248-18255.
47. Shine, J. and Dalgamo, L. (1974) Proc. Natl. Acad. Sci. USA, 71, 1342-1346.
48. Shapiro, L. (1993) Cell, 73, 841-855.
49. Proft, T., Hubert, H., Plagens, H. and Herrmann, R. (1996) Gene, 171, 79-82.
50. Kahane, I., Tucker, S., Leith, D. K., Morrison, P. J. and Baseman, J. B. (1985) Infect. Immunol., 50, 944-946.
51. Su, C. J., Chavoya, A., Dallo, S. F. and Baseman, J. B. (1990) Infect. Immunol., 58, 2669-2674.
52. Ruland, K., Himmelreich, R. and Herrmann, R. (1994) J. Bacteriol., 176, 5202-5209
53. Vicente, M. and Errington, J. (1996) Mol. Microbiol., 20, 1-7.
54. Sankaran, K., Gupta, S. D. and Wu, H. C. (1995) Methods Enzymol, 250, 683-697
55. Gilson, E., Alloing, G., Schmidt, T., Claverys, J. P., Dudler, R. and Hofnung, M. (1988) EMBO J., 7, 3971-3974.
56. Citti, C. and Wise, K. S. (1995) Mol. Mircobiol., 18, 649-660.
57. Higgins, C. F. (1992) Annu. Rev. Cell Biol., 8, 67-113.
58. Postma, P. W., Lengeler, J. W. and Jacobson, G. R. (1993) Microbiol. Rev., 57, 543-594
59. Path, M. J. and Kolter, R. (1993) Microbiol. Rev., 57, 995-1017.
60. Schatz, G. and Dobberstein, B. (1996) Science, 271, 1519-1526
61. Freundt, E. A. and Razin, S. (1984) In Krieg, N. R. and Holt, J. G. e. (eds), Bergey's Manual of Systematic Bacteriology, Vol. I. Williams and Wilkins, Baltimore, pp. 742-770.
62. Pollack, J. D. (1992) In Maniloff, J., McElhaney, R. N., Finch, L. R. and Baseman, J. B. e. (eds), Mycoplasmas - Molecular Biology and Pathogenesis. American Society for Microbiology, Washington, DC, pp. 181-200.
63. Plackett, P., Marmion, B. P., Shaw, E. J. and Lemke, R. M. (1969) Aust. J. Exp. Biol. Med. Sci., 47, 171-195.
64. Kirchhoff, H. (1992) In Maniloff, J., McElhaney, R. N., Finch, L. R. and Baseman, J. B. e. (eds.), Mycoplasmas - Molecular Biology and Pathogenesis. Americam Society for Microbiology, Washington, DC, pp. 289-308.
65. Matic, I., Rayssiguier, C. and Radman M. (1995) Cell, 80, 507-515.
66. Atkins, J. F. and Gesteland, R. F. (1996) Nature, 379, 769-771
67. Rottem, S., Adar, L., Gross, Z., Ne'Eman, Z. and Davis, P. J. (1986) J. Bacteriol., 167, 299-304.