A novel feature-based method for whole genome phylogenetic analysis without alignment: Application to HEV genotyping and subtyping

Biochemical and Biophysical Research Communications

Volumn 368, Issue 2, 2008, Pages 223-230

  Liu, Zhihua ^a,b,c   Meng, Jihong ^d   Sun, Xiao ^a  

^a SOUTHEAST UNIVERSITY   (China)

^b HARVARD MEDICAL SCHOOL   (United States)

^c HARVARD SCHOOL OF PUBLIC HEALTH   (United States)

^d MEDICAL SCHOOL OF SOUTHEAST UNIVERSITY   (China)

Author keywords

Alignment free; Base base correlation; Hepatitis E virus; Whole genome phylogeny

Indexed keywords

ALGORITHM; ANALYTIC METHOD; ARTICLE; GENE CONSTRUCT; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC DISTANCE; HEPATITIS E VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; VIRAL GENETICS; VIRUS GENOME; VIRUS TYPING;

ALGORITHMS; BASE SEQUENCE; CHROMOSOME MAPPING; DNA MUTATIONAL ANALYSIS; EVOLUTION, MOLECULAR; GENOME, VIRAL; HEPATITIS E VIRUS; MOLECULAR SEQUENCE DATA; PATTERN RECOGNITION, AUTOMATED; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

HEPATITIS E VIRUS;

EID: 39549123618     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2008.01.070     Document Type: Article

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