SHOT: A web server for the construction of genome phylogenies

Trends in Genetics

Volumn 18, Issue 3, 2002, Pages 158-162

  Korbel, Jan O ^a   Snel, Berend ^a   Huynen, Martijn A ^b   Bork, Peer ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

^b RADBOUD UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA;

DATA BASE; GENE TRANSFER; GENOME; GENOME SIZE; PHYLOGENY; PRIORITY JOURNAL; REVIEW;

EID: 0036499057     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-9525(01)02597-5     Document Type: Note

References (20)

1. Genome phylogeny based on gene content
2. Whole genome-based phylogenetic analysis of free-living microorganisms
3. The genomic tree as revealed from whole proteome comparisons
4. The winds of (evolutionary) change: Breathing new life into microbiology
5. The RDP (Ribosomal Database Project)
6. Big trees from little genomes: Mitochondrial gene order as a phylogenetic tool
7. Inversions and the dynamics of eukaryotic gene order
8. Identification of common molecular subsequences
9. PHYLIP-phylogeny inference package (Version 3.2)
10. Universal trees based on large combined protein sequence data sets
11. A kingdom-level phylogeny of eukaryotes based on combined protein data
12. Animal phylogeny: Root and branch surgery
13. The genome sequence of the thermoacidophilic scavenger Thermoplasma acidophilum
14. Genome sequence of Halobacterium species NRC-1
15. Gene and context: Integrative approaches to genome analysis
16. Structural and genomic correlates of hyperthermostability
17. Were our ancestors actually hyperthermophiles? Viewpoint of a devil's advocate
18. Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
19. Bringing gene order into bacterial shape
20. Evolution of gene order conservation in prokaryotes