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Volumn 3, Issue 4, 2005, Pages 201-205

Classifying genomic sequences by sequence feature analysis

Author keywords

BBC; Discriminant analysis; Genome; PCA; Sequence feature analysis

Indexed keywords

DINUCLEOTIDE; SPACER DNA;

EID: 33745002952     PISSN: 16720229     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1672-0229(05)03027-5     Document Type: Article
Times cited : (18)

References (10)
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    • Words in DNA sequences: Some case studies based on their frequency statistics
    • Basu, S., et al. 2003. Words in DNA sequences: some case studies based on their frequency statistics. J. Math. Biol. 46: 479-503.
    • (2003) J. Math. Biol. , vol.46 , pp. 479-503
    • Basu, S.1
  • 2
    • 0038648028 scopus 로고    scopus 로고
    • Quantifying the species-specificity in genomic signatures, synonymous codon choice, amino acid usage and G+C content
    • Sandberg, R., et al. 2003. Quantifying the species-specificity in genomic signatures, synonymous codon choice, amino acid usage and G+C content. Gene 311: 35-42.
    • (2003) Gene , vol.311 , pp. 35-42
    • Sandberg, R.1
  • 3
    • 2342636373 scopus 로고    scopus 로고
    • A nucleotide composition constraint of genome sequences
    • Zhang, C.T. and Zhang, R. 2004. A nucleotide composition constraint of genome sequences. Comput. Biol. Chem. 28: 149-153.
    • (2004) Comput. Biol. Chem. , vol.28 , pp. 149-153
    • Zhang, C.T.1    Zhang, R.2
  • 4
    • 0034125366 scopus 로고    scopus 로고
    • Probabilistic and statistical properties of words: An overview
    • Reinert, G., et al. 2000. Probabilistic and statistical properties of words: an overview. J. Comput. Biol. 7: 1-46.
    • (2000) J. Comput. Biol. , vol.7 , pp. 1-46
    • Reinert, G.1
  • 5
    • 0029060923 scopus 로고
    • Dinucleotide relative abundance extremes: A genomic signature
    • Karlin, S. and Burge, C. 1995. Dinucleotide relative abundance extremes: a genomic signature. Trends Genet. 11: 283-290.
    • (1995) Trends Genet. , vol.11 , pp. 283-290
    • Karlin, S.1    Burge, C.2
  • 7
    • 0034887748 scopus 로고    scopus 로고
    • Capturing whole-genome characteristics in short sequences using a naïve Bayesian classifier
    • Sandberg, R., et al. 2001. Capturing whole-genome characteristics in short sequences using a naïve Bayesian classifier. Genome Res. 11: 1404-1409.
    • (2001) Genome Res. , vol.11 , pp. 1404-1409
    • Sandberg, R.1
  • 9
    • 0034094820 scopus 로고    scopus 로고
    • SINE retroposons can be used in vivo as nucleation centers for de novo methylation
    • Arnaud, P., et al. 2000. SINE retroposons can be used in vivo as nucleation centers for de novo methylation. Mol. Cell. Biol. 20: 3434-3441.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 3434-3441
    • Arnaud, P.1
  • 10
    • 0034612242 scopus 로고    scopus 로고
    • LINE-1 elements and X chromosome inactivation: A function for "junk" DNA?
    • Lyon, M.F. 2000. LINE-1 elements and X chromosome inactivation: a function for "junk" DNA? Proc. Natl. Acad. Sci. USA 97: 6248-6249.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 6248-6249
    • Lyon, M.F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.