The cyclophilin-like domain of Ran-binding protein-2 modulates selectively the activity of the ubiquitin-proteasome system and protein biogenesis

Journal of Biological Chemistry

Volumn 282, Issue 48, 2007, Pages 34770-34778

  Yi, Haiqing ^a   Friedman, Julie L ^a   Ferreira, Paulo A ^a,b  

^a DUKE UNIVERSITY   (United States)

^b DUKE UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYCLOPHILIN LIKE DOMAINS; DEUBIQUITYLATION; ENDOPLASMIC RETICULUM; PROTEASOMES; PROTEIN DEGRADATION; RETINITIS PIGMENTOSA; UBIQUITIN; YELLOW FLUORESCENT PROTEINS;

CELLS; DEGRADATION; DISEASES; GROWTH KINETICS; PROTEOLYSIS;

PROTEINS;

BENZYLOXYCARBONYLLEUCYLLEUCYLLEUCINAL; CARRIER PROTEINS AND BINDING PROTEINS; CYCLOPHILIN; LACTACYSTIN; PROTEASOME; PROTEASOME INHIBITOR; PROTEIN SUBUNIT; RAN BINDING PROTEIN 2; RAN PROTEIN; SUMO PROTEIN; SYNAPSIN I; UBIQUITIN; UNCLASSIFIED DRUG; YELLOW FLUORESCENT PROTEIN;

ANIMAL CELL; ARTICLE; BIOGENESIS; CELL STRAIN COS7; CONTROLLED STUDY; ENDOPLASMIC RETICULUM; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN DEGRADATION; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; PROTEIN STRUCTURE; PROTEIN SYNTHESIS;

AMINO ACID MOTIFS; ANIMALS; BACTERIAL PROTEINS; CATTLE; CELL LINE; CERCOPITHECUS AETHIOPS; COS CELLS; CYCLOPHILINS; ENZYME INHIBITORS; LUMINESCENT PROTEINS; MODELS, GENETIC; MOLECULAR CHAPERONES; NUCLEAR PORE COMPLEX PROTEINS; PROTEASOME ENDOPEPTIDASE COMPLEX; PROTEIN STRUCTURE, TERTIARY; PROTEINS; RECOMBINANT FUSION PROTEINS; UBIQUITIN;

EID: 36849028012     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M706903200     Document Type: Article

References (79)

1. Ciechanover, A. (2005) Cell Death Differ. 12, 1178-1190
2. Ferrell, K., Wilkinson, C. R., Dubiel, W., and Gordon, C. (2000) Trends Biochem. Sci. 25, 83-88
3. Hirsch, C., and Ploegh, H. L. (2000) Trends Cell Biol. 10, 268-272
4. Schwartz, A. L., and Ciechanover, A. (1999) Annu. Rev. Med. 50, 57-74
5. Ciechanover, A. (2005) Nat. Rev. Mol. Cell. Biol. 6, 79-87
6. Pickart, C. M., and Cohen, R. E. (2004) Nat. Rev. Mol. Cell. Biol. 5, 177-187
7. Fu, H., Sadis, S., Rubin, D. M., Glickman, M., van Nocker, S., Finley, D., and Vierstra, R. D. (1998) J. Biol. Chem. 273, 1970-1981
8. van Nocker, S., Sadis, S., Rubin, D. M., Glickman, M., Fu, H., Coux, O., Wefes, I., Finley, D., and Vierstra, R. D. (1996) Mol. Cell. Biol. 16, 6020-6028
9. Young, P., Deveraux, Q., Beal, R. E., Pickart, C. M., and Rechsteiner, M. (1998) J. Biol. Chem. 273, 5461-5467
10. Deveraux, Q., Ustrell, V., Pickart, C., and Rechsteiner, M. (1994) J. Biol. Chem. 269, 7059-7061
11. Elsasser, S., Chandler-Militello, D., Muller, B., Hanna, J., and Finley, D. (2004) J. Biol. Chem. 279, 26817-26822
12. Elsasser, S., and Finley, D. (2005) Nat. Cell Biol. 7, 742-749
13. DeMarini, D. J., Papa, F. R., Swaminathan, S., Ursic, D., Rasmussen, T. P., Culbertson, M. R., and Hochstrasser, M. (1995) Mol. Cell. Biol. 15, 6311-6321
14. Tsurumi, C., Shimizu, Y., Saeki, M., Kato, S., Demartino, G. N., Slaughter, C. A., Fujimuro, M., Yokosawa, H., Yamasaki, M., Hendil, K. B., Toh-e, A., Tanahashi, N., and Tanaka, K. (1996) Eur. J. Biochem. 239, 912-921
15. Yokota, K., Kagawa, S., Shimizu, Y., Akioka, H., Tsurumi, C., Noda, C., Fujimuro, M., Yokosawa, H., Fujiwara, T., Takahashi, E., Ohba, M., Yamasaki, M., DeMartino, G. N., Slaughter, C. A., Toh-e, A., and Tanaka, K. (1996) Mol. Biol. Cell 7, 853-870
16. Glickman, M. H., Rubin, D. M., Fried, V. A., and Finley, D. (1998) Mol. Cell. Biol. 18, 3149-3162
17. Schmidt, M., Hanna, J., Elsasser, S., and Finley, D. (2005) Biol. Chem. 386, 725-737
18. Kleijnen, M. F., Shih, A. H., Zhou, P., Kumar, S., Soccio, R. E., Kedersha, N. L., Gill, G., and Howley, P. M. (2000) Mol. Cell 6, 409-419
19. Ortolan, T. G., Tongaonkar, P., Lambertson, D., Chen, L., Schauber, C., and Madura, K. (2000) Nat. Cell Biol. 2, 601-608
20. Matilla, A., Gorbea, C., Einum, D. D., Townsend, J., Michalik, A., van Broeckhoven, C., Jensen, C. C., Murphy, K. J., Ptacek, L. J., and Fu, Y. H. (2001) Hum. Mol. Genet. 10, 2821-2831
21. Sakata, E., Yamaguchi, Y., Kurimoto, E., Kikuchi, J., Yokoyama, S., Yamada, S., Kawahara, H., Yokosawa, H., Hattori, N., Mizuno, Y., Tanaka, K., and Kato, K. (2003) EMBO Rep. 4, 301-306
22. Kitada, T., Asakawa, S., Hattori, N., Matsumine, H., Yamamura, Y., Minoshima, S., Yokochi, M., Mizuno, Y., and Shimizu, N. (1998) Nature 392, 605-608
23. Cummings, C. J., Mancini, M. A., Antalffy, B., DeFranco, D. B., Orr, H. T., and Zoghbi, H. Y. (1998) Nat. Genet. 19, 148-154
24. Gouw, L. G., Digre, K. B., Harris, C. P., Haines, J. H., and Ptacek, L. J. (1994) Neurology 44, 1441-1447
25. Martin, J. J., Van Regemorter, N., Krols, L., Brucher, J. M., de Barsy, T., Szliwowski, H., Evrard, P., Ceuterick, C., Tassignon, M. J., Smet-Dieleman, H., Hayez-Delatte, F., Willems, P. J., and Van Broeckhoven, C. (1994) Acta Neuropathol. (Berl.) 88, 277-286
26. Witkovsky, P. (2004) Doc. Ophthalmol. 108, 17-40
27. Kristiansen, M., Deriziotis, P., Dimcheff, D. E., Jackson, G. S., Ovaa, H., Naumann, H., Clarke, A. R., van Leeuwen, F. W., Menendez-Benito, V., Dantuma, N. P., Portis, J. L., Collinge, J., and Tabrizi, S. J. (2007) Mol. Cell 26, 175-188
28. Bennett, E. J., Shaler, T. A., Woodman, B., Ryu, K. Y., Zaitseva, T. S., Becker, C. H., Bates, G. P., Schulman, H., and Kopito, R. R. (2007) Nature 448, 704-708
29. McNaught, K. S., Belizaire, R., Isacson, O., Jenner, P., and Olanow, C. W. (2003) Exp. Neurol. 179, 38-46
30. Jiang, Y. H., and Beaudet, A. L. (2004) Curr. Opin. Pediatr. 16, 419-426
31. Tarpey, P. S., Raymond, F. L., O'Meara, S., Edkins, S., Teague, J., Butler, A., Dicks, E., Stevens, C., Tofts, C., Avis, T., Barthorpe, S., Buck, G., Cole, J., Gray, K., Halliday, K., Harrison, R., Hills, K., Jenkinson, A., Jones, D., Menzies, A., Mironenko, T., Perry, J., Raine, K., Richardson, D., Shepherd, R., Small, A., Varian, J., West, S., Widaa, S., Mallya, U., Moon, J., Luo, Y., Holder, S., Smithson, S. F., Hurst, J. A., Clayton-Smith, J., Kerr, B., Boyle, J., Shaw, M., Vandeleur, L., Rodriguez, J., Slaugh, R., Easton, D. F., Wooster, R., Bobrow, M., Srivastava, A. K., Stevenson, R. E., Schwartz, C. E., Turner, G., Gecz, J., Futreal, P. A., Stratton, M. R., and Partington, M. (2007) Am. J. Hum. Genet. 80, 345-352
32. Zou, Y., Liu, Q., Chen, B., Zhang, X., Guo, C., Zhou, H., Li, J., Gao, G., Guo, Y., Yan, C., Wei, J., Shao, C., and Gong, Y. (2007) Am. J. Hum. Genet. 80, 561-566
33. Ethen, C. M., Hussong, S. A., Reilly, C., Feng, X., Olsen, T. W., and Ferrington, D. A. (2007) FEBS Lett. 581, 885-890
34. Kapphahn, R. J., Bigelow, E. J., and Ferrington, D. A. (2007) Exp. Eye Res. 84, 646-654
35. Ferreira, P. A., Hom, J. T., and Pak, W. L. (1995) J. Biol. Chem. 270, 23179-23188
36. Yokoyama, N., Hayashi, N., Seki, T., Pante, N., Ohba, T., Nishii, K., Kuma, K., Hayashida, T., Miyata, T., Aebi, U., Fukui, M., and Nishimoto, T. (1995) Nature 376, 184-188
37. Wilken, N., Senecal, J. L., Scheer, U., and Dabauvalle, M. C. (1995) Eur. J. Cell Biol. 68, 211-219
38. Wu, J., Matunis, M. J., Kraemer, D., Blobel, G., and Coutavas, E. (1995) J. Biol. Chem. 270, 14209-14213
39. Fauser, S., Aslanukov, A., Roepman, R., and Ferreira, P. A. (2001) Mamm. Genome 12, 406-415
40. Aslanukov, A., Bhowmick, R., Guruju, M., Oswald, J., Raz, D., Bush, R. A., Sieving, P. A., Lu, X., Bock, C. B., and Ferreira, P. A. (2006) PLoS Genet. 2, e177
41. Cai, Y., Singh, B. B., Aslanukov, A., Zhao, H., and Ferreira, P. A. (2001) J. Biol. Chem. 276, 41594-41602
42. Delphin, C., Guan, T., Melchior, F., and Gerace, L. (1997) Mol. Biol. Cell 8, 2379-2390
43. Ferreira, P. A., Nakayama, T. A., Pak, W. L., and Travis, G. H. (1996) Nature 383, 637-640
44. Ferreira, P. A., Nakayama, T. A., and Travis, G. H. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 1556-1561
45. Ferreira, P. A., Yunfei, C., Schick, D., and Roepman, R. (1998) J. Biol. Chem. 273, 24676-24682
46. Pichler, A., Gast, A., Seeler, J. S., Dejean, A., and Melchior, F. (2002) Cell 108, 109-120
47. Saitoh, H., Pizzi, M. D., and Wang, J. (2002) J. Biol. Chem. 277, 4755-4763
48. Singh, B. B., Patel, H. H., Roepman, R., Schick, D., and Ferreira, P. A. (1999) J. Biol. Chem. 274, 37370-37378
49. Villa Braslavsky, C. I., Nowak, C., Gorlich, D., Wittinghofer, A., and Kuhlmann, J. (2000) Biochemistry 39, 11629-11639
50. Cho, K., Cai, Y., Yi, H., Yeh, A., Aslanukov, A., and Ferreira, P. A. (2007) Traffic 8, 1722-1735
51. Lee, G. W., Melchior, F., Matunis, M. J., Mahajan, R., Tian, Q., and Anderson, P. (1998) J. Biol. Chem. 273, 6503-6507
52. Mahajan, R., Delphin, C., Guan, T., Gerace, L., and Melchior, F. (1997) Cell 88, 97-107
53. Mahajan, R., Gerace, L., and Melchior, F. (1998) J. Cell Biol. 140, 259-270
54. Matunis, M. J., Coutavas, E., and Blobel, G. (1996) J. Cell Biol. 135, 1457-1470
55. Ferreira, P. A. (2005) Hum. Mol. Genet. 14, R259-R267
56. Kisselev, A. F., and Goldberg, A. L. (2005) Methods Enzymol. 398, 364-378
57. Ferreira, P. A. (2000) Methods Enzymol. 315, 455-468
58. Roepman, R., Bernoud-Hubac, N., Schick, D. E., Maugeri, A., Berger, W., Ropers, H. H., Cremers, F. P., and Ferreira, P. A. (2000) Hum. Mol. Genet. 9, 2095-2105
59. Lindsten, K., Menendez-Benito, V., Masucci, M. G., and Dantuma, N. P. (2003) Nat. Biotechnol. 21, 897-902
60. Menendez-Benito, V., Verhoef, L. G., Masucci, M. G., and Dantuma, N. P. (2005) Hum. Mol. Genet. 14, 2787-2799
61. Bence, N. F., Sampat, R. M., and Kopito, R. R. (2001) Science 292, 1552-1555
62. Li, X., Zhao, X., Fang, Y., Jiang, X., Duong, T., Fan, C., Huang, C. C., and Kain, S. R. (1998) J. Biol. Chem. 273, 34970-34975
63. Song, J., Durrin, L. K., Wilkinson, T. A., Krontiris, T. G., and Chen, Y. (2004) Proc. Natl. Acad. Sci. U. S. A. 101, 14373-14378
64. Saeki, Y., Saitoh, A., Toh-e, A., and Yokosawa, H. (2002) Biochem. Biophys. Res. Commun. 293, 986-992
65. Hofmann, K., and Falquet, L. (2001) Trends Biochem. Sci. 26, 347-350
66. Castagnet, P., Mavlyutov, T., Cai, Y., Zhong, F., and Ferreira, P. (2003) Hum. Mol. Genet. 12, 1847-1863
67. Buschmann, T., Fuchs, S. Y., Lee, C. G., Pan, Z. Q., and Ronai, Z. (2000) Cell 101, 753-762
68. Desterro, J. M., Rodriguez, M. S., and Hay, R. T. (1998) Mol. Cell 2, 233-239
69. Bernier-Villamor, V., Sampson, D. A., Matunis, M. J., and Lima, C. D. (2002) Cell 108, 345-356
70. Kurtzman, A. L., and Schechter, N. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 5602-5607
71. Yeh, E. T., Gong, L., and Kamitani, T. (2000) Gene (Amst.) 248, 1-14
72. Lin, L., DeMartino, G. N., and Greene, W. C. (1998) Cell 92, 819-828
73. Schubert, U., Anton, L. C., Gibbs, J., Norbury, C. C., Yewdell, J. W., and Bennink, J. R. (2000) Nature 404, 770-774
74. Sheaff, R. J., Singer, J. D., Swanger, J., Smitherman, M., Roberts, J. M., and Clurman, B. E. (2000) Mol. Cell 5, 403-410
75. Larrivee, D. C., Conrad, S. K., Stephenson, R. S., and Pak, W. L. (1981) J. Gen. Physiol. 78, 521-545
76. Schneuwly, S., Shortridge, R. D., Larrivee, D. C., Ono, T., Ozaki, M., and Pak, W. L. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 5390-5394
77. Shieh, B. H., Stamnes, M. A., Seavello, S., Harris, G. L., and Zuker, C. S. (1989) Nature 338, 67-70
78. Stamnes, M. A., Shieh, B. H., Chuman, L., Harris, G. L., and Zuker, C. S. (1991) Cell 65, 219-227
79. Baumer, M., Kunzler, M., Steigemann, P., Braus, G. H., and Irniger, S. (2000) J. Biol. Chem. 275, 38929-38937