High degree of correlation between molecular polymorphism and geographic origin of wine yeast strains

Journal of Applied Microbiology

Volumn 103, Issue 6, 2007, Pages 2185-2195

  Martinez C ^a   Cosgaya, P ^a   Vasquez C ^a   Gac, S ^a   Ganga, A ^a  

^a UNIVERSIDAD DE SANTIAGO DE CHILE   (Chile)

Author keywords

DNA fingerprinting; Geographic origin; Molecular polymorphism; Wine; Yeast

Indexed keywords

DNA; POLYMORPHISM; WINE;

DEGREE OF CORRELATIONS; DNA FINGERPRINTING; GENETIC BACKGROUNDS; GEOGRAPHIC ORIGINS; MITOCHONDRIAL DNA; MOLECULAR POLYMORPHISM; POLYMORPHIC DNA; RANDOM AMPLIFICATION OF POLYMORPHIC; WINE YEAST; YEAST STRAIN;

YEAST;

MITOCHONDRIAL DNA;

GENETIC ANALYSIS; KARYOTYPE; MITOCHONDRIAL DNA; MOLECULAR ANALYSIS; POLYMORPHISM; YEAST;

ARTICLE; CORRELATION ANALYSIS; ELECTROPHORESIS; FUNGAL STRAIN; FUNGUS ISOLATION; GENETIC POLYMORPHISM; GENETICS; GEOGRAPHY; NONHUMAN; RANDOM AMPLIFIED POLYMORPHIC DNA; RESTRICTION MAPPING; WINE; YEAST;

CHILE; SOUTH AMERICA;

EID: 36549088175     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2007.03493.x     Document Type: Article

References (47)

1. Aa, E., Townsend, J.P., Adams, R.I., Nielsen, K.M. Taylor, J.W. (2006) Population structure and gene evolution in Saccharomyces cerevisiae. FEMS Yeast Res 6, 702 715.
2. Aguilera, A., Chávez, S. Malagón, F. (2000) Mitotic recombination in yeast: elements controlling its incidence. Yeast 16, 731 754.
3. Amerine, M. Kunkee, R. (1968) Microbiology of winemaking. Ann Rev Microbiol 22, 323 358.
4. Azumi, M. Goto-Yamamoto, N. (2001) AFLP analysis of type strains and laboratory and industrial strains of Saccharomyces sensu stricto and its application to phenetic clustering. Yeast 18, 1145 1154.
5. Bakalinsky, A.T. Snow, R. (1990) The chromosomal constitution of wine strains of Saccharomyces cerevisiae. Yeast 6, 367 382.
6. Beltran, G., Torija, M.J., Novo, M., Ferrer, N., Poblet, M., Guillamón, J.M., Rozes, N. Mas, A. (2002) Analysis of yeast populations during alcoholic fermentation: a six-year follow-up study. Syst Appl Microbiol 25, 287 293.
7. Bidenne, C., Blondin, B., Dequin, S. Vezinhet, F. (1992) Analysis of the chromosomal DNA polymorphism of the wine strains of Saccharomyces cerevisiae. Curr Genet 22, 1 7.
8. Bradbury, J.E., Richards, K.D., Niederer, H.A., Lee, S.A., Dunbar, P.R. Gardner, R.C. (2006) A homozygous diploid subset of commercial wine yeast strains. Antonie Van Leeuwenhoek 89, 27 37.
9. Capece, A., Salzano, G. Romano, P. (2003) Molecular typing techniques as a tool to differentiate non-Saccharomyces wine species. Int J Food Microbiol 84, 33 39.
10. Cappello, M., Bleve, G., Grieco, F., Dellaglio, F. Zacheo, G. (2004) Characterization of Saccharomyces cerevisiae strains isolated from must of grape grown in experimental vineyard. J Appl Microbiol 97, 1274 1280.
11. Cocolin, L., Pepe, V., Comitini, F., Comi, G. Ciani, M. (2004) Enological and genetic traits of Saccharomyces cerevisiae isolated from former and modern wineries. FEMS Yeast Res 5, 237 245.
12. Codón, A., Benítez, T. Korhola, M. (1998) Chromosomal polymorphism and adaptation to specific industrial environments of Saccharomyces cerevisiae strains. Appl Microbiol Biotechnol 49, 154 163.
13. Dobzhansky, T. (1951) Genetics and the Origin of Species. New York : Columbia University Press.
14. Esteve-Zarzoso, B., Belloch, C., Uruburu, F. Querol, A. (1999) Identification of yeasts by RFLP analysis of the 5.8S rRNA gene and the two ribosomal internal transcribed spacers. Int J Syst Bacteriol 49, 329 337.
15. Esteve-Zarzoso, B., Gostincar, A., Bobet, R., Uruburu, F. Querol, A. (2000) Selection and molecular characterization of wine yeasts isolated from the 'El Penedès' area (Spain). Food Microbiol 17, 553 562.
16. Fernández-Espinar, M.T., Lopez, V., Ramon, D., Bartra, E. Querol, A. (2001) Study of the authenticity of commercial wine yeast strains by molecular techniques. Int J Food Microbiol 70, 1 10.
17. Fernández-Espinar, T.M., Barrio, E. Querol, A. (2003) Analysis of the genetic variability in the species of the Saccharomyces sensu stricto complex. Yeast 20, 1213 1226.
18. Ganga, M.A. Martínez, C. (2004) Effect of wine yeast monoculture practice on the biodiversity of non-Saccharomyces yeasts. J Appl Microbiol 96, 76 83.
19. Guillamón, J., Barrio, E., Huerta, T. Querol, A. (1994) Rapid characterization of four species of the Saccharomyces sensu stricto complex according to mitochondrial DNA patterns. Int J Syst Bacteriol 44, 708 714.
20. Guillamón, J., Barrio, E. Querol, A. (1996) Characterization of wine yeast strains of the Saccharomyces genus on the basis of molecular markers: relationships between genetic distance and geographic or ecological origin. Syst Appl Microbiol 19, 122 132.
21. Legras, J.L., Ruh, O., Merdinoglu, D. Karst, F. (2005) Selection of hypervariable microsatellite loci for the characterization of Saccharomyces cerevisiae strains. Int J Food Microbiol 102, 73 83.
22. Longo, E. Vezinhet, F. (1993) Chromosomal rearrangements during vegetative growth of a wild strain of Saccharomyces cerevisiae. Appl Environ Microbiol 59, 322 326.
23. Lopes, C., Rodríguez, M., Sangorrín, M., Querol, A. Caballero, A. (2007) Patagonian wines: implantation of an indigenous strain of Saccharomyces cerevisiae in fermentations conducted in traditional and modern cellars. J Ind Microbiol Biotechnol 34, 139 149.
24. Martínez, C., Gac, S., Lavin, A. Ganga, A. (2004) Genetic characterization of Saccharomyces cerevisiae strains isolated from wine-making producing areas in south-America. J Appl Microbiol 96, 1161 1168.
25. Nadal, D., Colomer, B. Piña, B. (1996) Molecular polymorphism distribution in phenotypically distinct populations of wine yeast strains. Appl Environ Microbiol 62, 1944 1950.
26. Nikolaou, E., Soufleros, E., Bouloumpasi, E. Tzanetakis, N. (2006) Selection of indigenous Saccharomyces cerevisiae strains according to their oenological characteristics and vinification results. Food Microbiol 23, 205 211.
27. Page, R. (1996) TREEVIEW: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12, 357 358.
28. Pavlicek, A., Hrda, S. Flegr, J. (1999) Free-Tree-freeware program for construction of phylogenetic trees on the basis of distance data and bootstrap/jackknife analysis of the tree robustness: application in the RAPD analysis of genus Frenkelia. Folia Biologica (Praha) 45, 97 99.
29. Perez-Ortin, J.E., Querol, A., Puig, S. Barrio, E. (2002) Molecular characterization of a chromosomal rearrangement involved in the adaptive evolution of yeast strains. Genome Res 12, 1533 1539.
30. Piskur, J. (1994) Inheritance of the yeast mitochondrial genome. Plasmid 31, 229 241.
31. Pretorius, I.S. (2000) Tailoring wine yeast for the new millennium: novel approaches to the ancient art of winemaking. Yeast 16, 675 729.
32. Puig, S., Querol, A., Barrio, E. Pérez-Ortin, J. (2000) Mitotic recombination and genetic change in Saccharomyces cereviseae during wine fermentation. Appl Environ Microbiol 66, 2057 2061.
33. Querol, A., Barrio, E. Ramón, D. (1992a) A comparative study of different methods of yeast strain characterization. Syst Appl Microbiol 15, 439 446.
34. Querol, A., Huerta, T., Barrio, E. Ramón, D. (1992b) Dry yeast strain for use in fermentation of Alicante wines: selection and DNA patterns. J Food Sci 57, 183 186.
35. Querol, A., Barrio, E., Huerta, T. Ramón, D. (1992c) Molecular monitoring of wine fermentations conducted by active dry yeast strains. Appl Environ Microbiol 58, 2948 2953.
36. Rachidi, N., Barre, P. Blondin, B. (1999) Multiple Ty-mediated chromosomal translocations lead to karyotype changes in a wine strain of Saccharomyces cerevisiae. Mol Gen Genet 261, 841 850.
37. Regodon, J., Perez, F., Valdes, M., de Miguel, C. Ramirez, M. (1997) A simple and effective procedure for selection of wine yeast strains. Food Microbiol 14, 247 254.
38. Sabate, J., Cano, J., Querol, A. Guillamón, J. (1998) Diversity of Saccharomyces strains in wine fermentations: analysis for two consecutive years. Lett Appl Microbiol 26, 452 455.
39. Salmon, J.-M. (1997) Enological fermentation kinetics of an isogenic ploidy series derived from an industrial Saccharomyces cerevisiae strain. J Ferment Bioeng 83, 253 260.
40. Schuller, D. Casal, M. (2007) The genetic structure of fermentative vineyard-associated Saccharomyces cerevisiae populations revealed by microsatellite analysis. Antonie van Leeuwenhoek 91, 137 150.
41. Schuller, D., Valero, E., Dequin, S. Casal, M. (2004) Survey of molecular methods for the typing of wine yeast strains. FEMS Microbiol Lett 231, 19 26.
42. Schuller, D., Alves, H., Dequin, S. Casal, M. (2005) Ecological survey of Saccharomyces cerevisiae strains from vineyards in the Vinho Verde Region of Portugal. FEMS Microbiol Ecol 51, 167 177.
43. Torriani, S., Zapparoli, G. Suzzi, G. (1999) Genetic and phenotypic diversity of Saccharomyces sensu stricto strains isolated from Amarone wine. Antonie van Leeuwenhoek 75, 207 215.
44. Valero, E., Schuller, D., Cambon, B., Casal, M. Dequin, S. (2005) Dissemination and survival of commercial wine yeast in the vineyard: a large-scale, three-year study. FEMS Yeast Res 5, 959 969.
45. Valero, E., Cambon, B., Schuller, D., Casal, M. Dequin, S. (2007) Biodiversity of Saccharomyces yeast strains from grape berries of wine-producing areas using strater commercial yeasts. FEMS Yeast Res 7, 317 329.
46. Versavaud, A., Courcoux, P., Rouland, L. Hallet, J. (1995) Genetic diversity and geographical distribution of wild Saccharomyces cerevisiae strains from the wine-producing area of Charentes, France. Appl Environ Microbiol 61, 3521 3529.
47. Vezinhet, F., Hallet, J., Valade, M. Poulard, A. (1992) Ecological survey of wine yeast strains by molecular methods of identification. Am J Enol Vitic 43, 83 86.