Expression of recombinant proteins in Pichia pastoris

Applied Biochemistry and Biotechnology

Volumn 142, Issue 2, 2007, Pages 105-124

  Li, Pingzuo ^a,b   Anumanthan, Anukanth ^c   Gao, Xiu Gong ^d   Ilangovan, Kuppusamy ^e   Suzara, Vincent V ^f   Düzgüneş, Nejat ^f   Renugopalakrishnan, V ^b,g,h  

^a INSTITUTE OF GEOLOGY AND GEOPHYSICS   (China)

^b BOSTON CHILDREN S HOSPITAL   (United States)

^c HARVARD MEDICAL SCHOOL   (United States)

^d NATIONAL CANCER INSTITUTE   (United States)

^e SCHOOL OF ENGINEERING AND SCIENCES   (Mexico)

^f UNIVERSITY OF THE PACIFIC   (United States)

^g FLORIDA INTERNATIONAL UNIVERSITY   (United States)

^h NATIONAL UNIVERSITY OF SINGAPORE   (Singapore)

Author keywords

Alcohol oxidase promoter; AOX1; Dissolved oxygen; Gene integration; Methanol induction; Pichia pastoris; Protein expression

Indexed keywords

FERMENTATION; GENE ENCODING; GLYCOSYLATION; METHANOL; OPTIMIZATION; PH EFFECTS; PLANTS (BOTANY);

ALCOHOL OXIDASE PROMOTERS; GENE INTEGRATION; METHANOL INDUCTION; PICHIA PASTORIS; PROTEIN EXPRESSION;

PROTEINS;

DISSOLVED OXYGEN; METHANOL; RECOMBINANT PROTEIN;

CONTROLLED STUDY; EXPRESSION VECTOR; FERMENTATION; GENOME; GLYCOSYLATION; HOST; NONHUMAN; PH; PICHIA PASTORIS; PROTEIN ANALYSIS; PROTEIN EXPRESSION; PROTEIN STABILITY; REVIEW; TEMPERATURE;

FERMENTATION; GENETIC VECTORS; GLYCOSYLATION; HYDROGEN-ION CONCENTRATION; METHANOL; MODELS, GENETIC; OXYGEN; PICHIA; RECOMBINANT PROTEINS; TEMPERATURE;

PICHIA PASTORIS;

EID: 35048815442     PISSN: 02732289     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12010-007-0003-x     Document Type: Review

References (104)

1. Romanos, M. A., Scorer, C. A., & Clare, J. J. (1992). Yeast, 8, 423-488.
2. Cregg, J. M., Vedvick, T. S., & Raschke, W. C. (1993). Biotechnology (NY), 11, 905-910.
3. Li, P. Z., Gao, X.-G., Arellano, R. O., & Renugopalakrishnan, V. (2001). Protein Expression and Purification, 22, 369-380.
4. Cereghino, G. P., Cereghino, J. L., Ilgen, C., & Cregg, J. M. (2002). Current Opinion in Biotechnology, 13, 329-332.
5. Higgins, D. R., & Cregg, J. M. (1998). Methods in Molecular Biology, 103, 1-15.
6. Lin-Cereghino, G. P., Sunga, A. J., Lin Cereghino, J., & Cregg, J. M. (2001). Genetic Engineering (NY), 23, 157-169.
7. Koutz, P. J., Davis, G. R., Stillman, C., Barringer, K., Cregg, J., & Thill, G. (1989). Yeast, 5, 167-177.
8. Waterham, H. R., Digan, M. E., Koutz, P. J., Lair, S. V., & Cregg, J. M. (1997). Gene, 186, 37-44.
9. Shen, S., Sulter, G., Jeffries, T. W., & Cregg, J. M. (1998). Gene, 216, 93-102.
10. Brierley, R. A. (1998). Methods in Molecular Biology, 103, 149-177.
11. Liu, H., Tan, X., Russell, T. A., Veenhuis, M., & Cregg, J. M. (1995). Journal of Biological Chemistry, 270, 10940-10951.
12. Sears, I. B., O'Connor, J., Rossanese, O. W., & Glick, B. S. (1998). Yeast, 14, 783-790.
13. Clare, J. J., Romanos, M. A., Rayment, F. B., Rowedder, J. E., Smith, M. A., Payne, M. M., et al. (1991). Gene, 105, 205-212.
14. Cregg, J. M., Barringer, K. J., Hessler, A. Y., & Madden, K. R. (1985). Molecular and Cellular Biology, 5, 3376-3385.
15. Cregg, J. M., & Madden, K. R. (1989). Molecular and General Genetics, 219, 320-323.
16. Higgins, D. R., Busser, K., Comiskey, J., Whittier, P. S., Purcell, T. J., & Hoeffler, J. P. (1998). Methods in Molecular Biology, 103, 41-53.
17. Cereghino, J. L., & Cregg, J. M. (2000). FEMS Microbiology Reviews, 24, 45-66.
18. Veenhuis, M., van Dijken, J. P., & Harder, W. (1983). Advances in Microbial Physiology, 24, 1-82.
19. Tschopp, J. F., Sverlow, G., Kosson, R., Craig, W., & Grinna, L. (1987). Biotechnology (NY), 5, 1305-1308.
20. Cregg, J. M., & Madden, K. R. (1987). In. G. G. Stewart, I. Russell, R. D. Klein, & R. R. Hiebsch (Eds.), Biological Research on Yeasts, Vol. 2. Boca Raton, FL.: CRC Press.
21. Chiruvolu, V., Cregg, J. M., & Meagher, M. M. (1997). Enzyme and Microbial Technology, 21, 277-283.
22. White, C. E., Hunter, M. J., Meininger, D. P., White, L. R., & Komives, E. A. (1995). Protein Engineering, 8, 1177-1187.
23. Scorer, C. A., Clare, J. J., McCombie, W. R., Romanos, M. A., & Sreekrishna, K. (1994). Biotechnology (NY), 12, 181-184.
24. Liu, H., Tan, X., Veenhuis, M., McCollum, D., & Cregg, J. M. (1992). Bacteriology, 174, 4943-4951.
25. Waterham, H. R., de Vries, Y., Russell, K. A., Xie, W., Veenhuis, M., & Cregg, J. M. (1996). Molecular and Cellular Biology, 16, 2527-2536.
26. Cregg, J. M., & Russell, K. A. (1998). Methods in Molecular Biology, 103, 27-39.
27. Sreekrishna, K., Potenz, R. B., Cruze, J. A., McCombie, W. R., Parker, K. A., Nelles, L., et al. (1988). Journal of Basic Microbiology, 28, 265-278.
28. Tuite, M. F., Clare, J. J., & Romanos, M. A. (1999). In S. J. Higgins & B. D. Hames (Eds.), Protein expression, a practical approach. Oxford University Press.
29. Laroche, Y., Storme, V., De Meutter, J., Messens, J., & Lauwereys, M. (1994). Biotechnology (NY), 12, 1119-1124.
30. Wright, A., & Morrison, S. L. (1997). Trends in Biotechnology, 15, 26-32.
31. Jenkins, N., Parekh, R. B., & James, D. C. (1996). Nature Biotechnology, 14, 975-981.
32. Gemmill, T. R., & Trimble, R. B. (1999). Biochimica et Biophysica Acta, 1426, 227-237.
33. Grinna, L., & Tschopp, J. F. (1989). Yeast, 5, 107-115.
34. Trimble, R. B., Atkinson, P. H., Tschopp, J. F., Townsend, R. R., & Maley, F. (1991). Journal of Biological Chemistry, 266, 22807-22817.
35. Tull, D., Gottschalk, T. E., Svendsen, I., Kramhoft, B., Phillipson, B. A., Bisgard-Frantzen, H., et al. (2001). Protein Expression and Purification, 21, 13-23.
36. Sevo, M., Degrassi, G., Skoko, N., Venturi, V., & Ljubijankic, G. (2002). FEM Yeast Research, 4, 271-277.
37. Callewaert, N., Laroy, W., Cadirgi, H., Geysens, S., Saelens, X., MinJou, W., et al. (2001). FEBS Letters, 503, 173-178.
38. Choi, B. K., Bobrowicz, P., Davidson, R. C., Hamilton, S. R., Kung, D. H., Li, H., et al. (2003). Proceedings of the National Academy of Sciences of the United States of America, 100, 5022-5027.
39. Kang, H. A., Choi, E. S., Hong, W. K., Kim, J. Y., Ko, S. M., Sohn, J. H., et al. (2000). Applied Microbiology and Biotechnology, 53, 575-582.
40. Chen, D. C., Wang, B. D., Chou, P. Y., & Kuo, T. T. (2000). Yeast, 16, 207-217.
41. Sreekrishna, K., Brankamp, R. G., Kropp, K. E., Blankenship, D. T., Tsay, J. T., Smith, P. L., et al. (1997). Gene, 190, 55-62.
42. Shi, X., Karkut, T., Chamankhah, M., Alting-Mees, M., Hemmingsen, S. M., & Hegedus, D. (2003). Protein Expression and Purification, 28, 321-330.
43. Murasugi, A., Asami, Y., & Mera-Kikuchi, Y. (2001). Protein Expression and Purification, 23, 282-288.
44. O'Callaghan, J., O'Brien, M. M., McClean, K., & Dobson, A. D. (2002). Journal of Industrial Microbiology and Biotechnology, 29, 55-59.
45. Wang, S. H., Yang, T. S., Lin, S. M., Tsai, M. S., Wu, S. C., & Mao, S. J. (2002). Protein Expression and Purification, 25, 41-49.
46. Issaly, N., Solsona, O., Joudrier, P., Gautier, M. F., Moulin, G., & Boze, H. J. (2001). Applied Microbiology, 90, 397-406.
47. Tsujikawa, M., Okabayashi, K., Morita, M., & Tanabe, T. (1996). Yeast, 12, 541-553.
48. Schein, C. H., & Noteborn, M. N. H. (1988). Biotechnology (NY), 6, 291-294.
49. Lee, S. C., Choi, Y. C., & Yu, M. H. (1990). European Journal of Biochemistry, 187, 417-424.
50. Broeze, R. J., Solomon, C. J., & Pope, D. H. (1978). Journal of Bacteriology, 34, 861-874.
51. Han, K. G., Lee, S. S., & Kang, C. (1999). Protein Expression and Purification, 16, 103-108.
52. Makrides, S. C. (1996). Microbiological Reviews, 60, 512-538.
53. Curvers, S., Brixius, P., Klauser, T., Thommes, J., Weuster-Botz, D., Takors, R., et al. (2001). Biotechnology Progress, 17, 495-502.
54. Soden, D. M., O'Callaghan, J., & Dobson, A. D. (2002). Microbiology, 148, 4003-4014.
55. Jahic, M., Gustavsson, M., Jansen, A. K., Martinelle, M., & Enfors, S. O. (2003). Journal of Biotechnology, 102, 45-53.
56. Murasugi, A., & Tohma-Aiba, Y. (2003). Protein Expression and Purification, 27, 244-252.
57. Koganesawa, N., Aizawa, T., Shimojo, H., Miura, K., Ohnishi, A., Demura, M., et al. (2002). Protein Expression and Purification, 25, 416-425.
58. Sarramegna, V., Demange, P., Milon, A., & Talmont, F. (2002). Protein Expression and Purification, 24, 212-220.
59. Stratton, J., Chiruvolu, V., & Meagher, M. (1998). Methods in Molecular Biology, 103, 107-120.
60. Minning, S., Serrano, A., Ferrer, P., Sola, C., Schmid, R. D., & Valero, F. (2001). Journal of Biotechnology, 86, 59-70.
61. Loewen, M. C., Liu, X., Davies, P. L., & Daugulis, A. J. (1997). Journal of Microbiology and Biotechnology, 48, 480-486.
62. Zhang, W., Hywood Potter, K. J., Plantz, B. A., Schlegel, V. L., Smith, L. A., & Meagher, M. M. (2003). Journal of Industrial Microbiology & Biotechnology, 30, 210-215.
63. Chung, J. D. (2000). Biotechnology & Bioengineering, 68, 298-307.
64. Zhang, W., Smith, L. A., Plantz, B. A., Schlegel, V. L., & Meagher, M. M. (2002). Biotechnology Progress, 18, 1392-1399.
65. d'Anjou, M. C., & Daugulis, A. J. (2001). Biotechnology & Bioengineering, 72, 1-11.
66. Sinha, J., Plantz, B. A., Zhang, W., Gouthro, M., Schlegel, V., Liu, C. P., et al. (2003). Biotechnology Progress, 19, 794-802.
67. Trinh, L. B., Phue, J. N., & Shiloach, J. (2003). Biotechnology & Bioengineering, 82, 438-444.
68. Li, Z., Xiong, F., Lin, Q., d'Anjou, M., Daugulis, A., Yang, D. S. C., et al. (2001). Protein Expression and Purification, 21, 438-445.
69. Oobatake, M., Yamasaki, T., Simmer, J. P., & Renugopalakrishnan, V. (2006). Proteins, 62, 461-469.
70. Renugopalakrishnan, V., Strzelczyk, A., Li, P. Z., Mokhnatyuk, A. A., Gursahani, S. H., Nagaraju, M., et al. (2003). International Journal of Quantum Chemistry, 95, 625-631.
71. Pearson, R., & Kemp, B. (1991). Methods in Enzymology, 200, 62-81.
72. Takagi, T., Suzuki, M., Baba, T., Minegishi, K., & Sasaki, S. (1984). Biochemical and Biophysical Research Communications, 121, 592-597.
73. Waterham, H. R., Titorenko, V. I., Haima, P., Cregg, J. M., Harder, W., & Veenhuis, M. (1994). Journal of Cell Biology, 127, 737-749.
74. Faber, K. N., Haima, P., Gietl, C., Harder, W., Ab, G., & Veenhuis, M. (1994). Proceedings of the National Academy of Sciences of the United States of America, 91, 12985-12989.
75. De Hoop, M. J., & Geert, A. B. (1992). Biochemical Journal, 286, 657-669.
76. Weiss, H. M., Haase, W., Michel, H., & Reilander, H. (1995). FEBS Letters, 377, 451-456.
77. Talmont, F., Sidobre, S., Demange, P., Milon, A., & Emorine, L. J. (1996). FEBS Letters, 394, 268-272.
78. McGrew, J. T., Leiske, D., Dell, B., Klinke, R., Krasts, D., Wee, S. F., et al. (1997). Gene, 187, 193-200.
79. Wu, S.-H., & Lagarias, J. C. (1996). Proceedings of the National Academy of Sciences of the United States of America, 93, 8989-8994.
80. Betancourt, L. H., Garcia, R., Gonzales, J., Montesino, R., Quintero, O., Takao, T., et al. (2001). FEMS Yeast Research, 1, 151-160.
81. Boraston, A. B., Sandercock, L. E., Warren, R. A., Kilburn, D. G. (2003). Journal of Molecular Microbiology and Biotechnology, 5, 29-36.
82. Reddy, S. T., Dahms, N. M. (2002). Protein Expression and Purification, 26, 290-300.
83. Hirose, M., Kameyama, S., Ohi, H. (2002). Yeast, 19, 1191-1202.
84. Jiang, S. T., Chen, G. H., Tang, S. J., Chen, C. S. (2002). Journal of Agricultural and Food Chemistry, 50, 5313-5317.
85. Watmann, T., Stephan, U. W., Bube, I., Boer, E., Melzer, M., Manteuffel, R., et al. (2002). Yeast, 19, 849-862.
86. Saito, A., Usui, M., Song, Y., Azakami, H., Kato, A. (2002). Journal of Biochemistry (Tokyo), 132, 77-82.
87. Rotticci-Mulder, J. C., Gustavsson, M., Holmquist, M., Hult, K., Martinelle, M. (2001). Protein Expression and Purification, 21, 386-392.
88. Letourneur, O., Gervasi, G., Gaia, S., Pages, J., Watelet, B., Jolivet, M. (2001). Biotechnology and Applied Biochemistry, 33, 35-45.
89. Best, E. A., Stedman, K. E., Bozic, C. M., Hunter, S. W., Vailes, L., Chapman, M. D. (2000). Protein Expression and Purification, 20, 462-471.
90. Sagt, C. M., Kleizen, B., Verwaal, R., de Jong, M. D., Muller, W. H., Smits, A. (2000). Applied and Environmental Microbiology, 66, 4940-4944.
91. Rodriguez, E., Wood, Z. A., Karplus, P. A., Lei, X. G. (2000). Archives of Biochemistry and Biophysics, 382, 105-112.
92. Boer, H., Teeri, T. T., Koivula, A. (2000). Biotechnology and Bioengineering, 69, 486-494.
93. Montesino, R., Nimtz, M., Quintero, O., Garcia, R., Falcon, V., Cremata, J. A. (1999). Glycobiology, 9, 1037-1043.
94. Wang, M., Lee, L. S., Nepomich, A., Yang, J. D., Conover, C., Whitlow, M. et al. (1998). Protein Engineering, 11, 1277-1283.
95. You, Y. H., Hefta, L. J., Yazaki, P. J., Wu, A. M., Shively, J. E. (1998). Anticancer Research, 18, 3193-3201.
96. Van den Steen, P., Rudd, P. M., Proost, P., Martens, E., Paemen, L., Kuster, B. et al. (1998). Biochimica et Biophysica Acta, 1425, 587-598.
97. Richard, F, Robert, P, Remy, JJ, Martinat, N, Bidart, JM, Salesse, R., et al. (1998). Biochemical and Biophysical Research Communications, 245, 847-852.
98. Zhu, A., Wang, Z. K., Beavis, R. (1998). Archives of Biochemistry and Biophysics, 352, 1-8.
99. Heimo, H., Palmu, K., Suominen, I. (1998). Protein Expression and Purification, 12, 85-92.
100. Martinet, W., Saelens, X., Deroo, T., Neirynck, S., Contreras, R., Min Jou, W., et al. (1997). European Journal of Biochemistry, 247, 332-338.
101. Abdulaev, N. G., Popp, M. P., Smith, W. C., Ridge, K. D. (1997). Protein Expression and Purification, 10, 61-69.
102. Williams, T. A., Michaud, A., Houard, X., Chauvet, M. T., Soubrier, F., Corvol, P. (1996). Biochemical Journal, 318, 125-131.
103. Hong, F., Meinander, N. Q., Jonsson, L. J. (2002). Biotechnology Bioengineering, 79, 438-449.
104. Whittaker, M. M., Whittaker, J. W. (2000). Protein Expression and Purification, 20, 105-111.