A consensus algorithm to screen genomes for novel families of transmembrane β barrel proteins

Proteins: Structure, Function and Genetics

Volumn 69, Issue 1, 2007, Pages 8-18

  Garrow, Andrew G ^a   Westhead, David R ^a  

^a UNIVERSITY OF LEEDS   (United Kingdom)

Author keywords

Algorithm; Outer membrane; Porin; Prediction; TMB hunt; Transmembrane barrel

Indexed keywords

CYTOPLASM PROTEIN; MEMBRANE PROTEIN; PERIPLASMIC PROTEIN; PORIN;

AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CELLULAR DISTRIBUTION; CONSENSUS; GENOME; HIDDEN MARKOV MODEL; HYDROPHOBICITY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN STRUCTURE;

ALGORITHMS; ARTIFICIAL INTELLIGENCE; BACTERIAL OUTER MEMBRANE PROTEINS; COMPUTATIONAL BIOLOGY; DATABASES, PROTEIN; GENOME; MARKOV CHAINS; MEMBRANE PROTEINS; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEOME; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN;

EID: 34548299663     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.21439     Document Type: Article

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