A Hidden Markov Model method, capable of predicting and discriminating β-barrel outer membrane proteins

BMC Bioinformatics

Volumn 5, Issue , 2004, Pages

  Bagos, Pantelis G ^a   Liakopoulos, Theodore D ^a   Spyropoulos, Ioannis C ^a   Hamodrakas, Stavros J ^a  

^a UNIVERSITY OF ATHENS   (Greece)

Author keywords

[No Author keywords available]

Indexed keywords

CORRELATION COEFFICIENT; GRAM-NEGATIVE BACTERIA; INTEGRAL MEMBRANE PROTEINS; LARGE-SCALE APPLICATIONS; OUTER MEMBRANE PROTEIN; PHYSICOCHEMICAL CHARACTERISTICS; TRANSMEMBRANE SEGMENTS; WATER SOLUBLE PROTEIN;

BIOINFORMATICS; BIOLOGICAL MEMBRANES; ESCHERICHIA COLI; FORECASTING; HIDDEN MARKOV MODELS; TOPOLOGY;

PROTEINS;

FECA PROTEIN; FEPA PROTEIN; FERRIC HYDROXAMATE UPTAKE PROTEIN COMPONENT A; MALTOPORIN; MEMBRANE PROTEIN; OPCA PROTEIN; OUTER MEMBRANE PROTEIN; OUTER MEMBRANE PROTEIN F; PORIN; SUCROSE PORIN; UNCLASSIFIED DRUG; WATER; ESCHERICHIA COLI PROTEIN; PEPTIDE;

ACCURACY; ALPHA HELIX; ARTICLE; CALCULATION; CLASSIFICATION; CONTROLLED STUDY; CORRELATION COEFFICIENT; DISCRIMINANT ANALYSIS; ESCHERICHIA COLI; GENE SEQUENCE; GRAM NEGATIVE BACTERIUM; INTERNET; NONHUMAN; PHYSICAL CHEMISTRY; PREDICTION; PROBABILITY; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEIN LOCALIZATION; PROTEIN STRUCTURE; PROTEOMICS; SCREENING TEST; SOLUBILITY; STATISTICAL MODEL; CHEMISTRY; COMPARATIVE STUDY; PREDICTIVE VALUE; PROTEIN TERTIARY STRUCTURE;

NEGIBACTERIA;

DATABASES, PROTEIN; ESCHERICHIA COLI PROTEINS; MARKOV CHAINS; MEMBRANE PROTEINS; MODELS, STATISTICAL; PEPTIDES; PREDICTIVE VALUE OF TESTS; PROTEIN STRUCTURE, TERTIARY;

EID: 2942522711     PISSN: 14712105     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2105-5-29     Document Type: Article

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