A sequence-profile-based HMM for predicting and discriminating β barrel membrane proteins

Bioinformatics

Volumn 18, Issue SUPPL. 1, 2002, Pages

  Martelli, Pier Luigi ^a   Fariselli, Piero ^a   Krogh, Anders ^b,c   Casadio, Rita ^a  

^a UNIVERSITY OF BOLOGNA   (Italy)

^b TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^c UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

Genome analysis; HMM; Outer membrane protein topology; Protein structure prediction; barrel membrane proteins

Indexed keywords

GLOBULAR PROTEIN; OUTER MEMBRANE PROTEIN; PROTEOME; MEMBRANE PROTEIN;

ALPHA HELIX; AMINO ACID SEQUENCE; CELL MEMBRANE; CONFERENCE PAPER; MATHEMATICAL ANALYSIS; PREDICTION; PRIORITY JOURNAL; PROTEIN ANALYSIS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; ALGORITHM; ARTICLE; CHEMICAL MODEL; CHEMICAL STRUCTURE; CHEMISTRY; CLASSIFICATION; COMPARATIVE STUDY; EVALUATION; METHODOLOGY; PROBABILITY; SEQUENCE HOMOLOGY; STATISTICAL MODEL; VALIDATION STUDY;

ALGORITHMS; MARKOV CHAINS; MEMBRANE PROTEINS; MODELS, CHEMICAL; MODELS, MOLECULAR; MODELS, STATISTICAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 4243671284     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/18.suppl_1.s46     Document Type: Conference Paper

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