메뉴 건너뛰기




Volumn 35, Issue 12, 2007, Pages 4186-4194

In vitro selection of a 5′-purine ribonucleotide transferase ribozyme

Author keywords

[No Author keywords available]

Indexed keywords

PURINE NUCLEOTIDE; RIBONUCLEOTIDE; RIBOZYME; TRANSFERASE; ADENOSINE 5' O (3 THIOTRIPHOSPHATE); ADENOSINE 5'-O-(3-THIOTRIPHOSPHATE); ADENOSINE TRIPHOSPHATE; DRUG DERIVATIVE; GUANOSINE TRIPHOSPHATE; UNCLASSIFIED DRUG;

EID: 34547623718     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkm438     Document Type: Article
Times cited : (5)

References (30)
  • 1
    • 0020417286 scopus 로고
    • Self-splicing RNA - auto-excision and auto-cyclization of the ribosomal-RNA intervening sequence of tetrahymena
    • Kruger,K., Grabowski,P.J., Zaug,A.J., Sands,J., Gottschling,D.E. and Cech,T.R. (1982) Self-splicing RNA - auto-excision and auto-cyclization of the ribosomal-RNA intervening sequence of tetrahymena. Cell, 31, 147-157.
    • (1982) Cell , vol.31 , pp. 147-157
    • Kruger, K.1    Grabowski, P.J.2    Zaug, A.J.3    Sands, J.4    Gottschling, D.E.5    Cech, T.R.6
  • 2
    • 0021013526 scopus 로고
    • The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
    • Guerrier-Takada,C., Gardiner,K., Marsh,T., Pace,N. and Altman,S. (1983) The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme. Cell, 35, 849-857.
    • (1983) Cell , vol.35 , pp. 849-857
    • Guerrier-Takada, C.1    Gardiner, K.2    Marsh, T.3    Pace, N.4    Altman, S.5
  • 3
    • 36849148382 scopus 로고
    • Origin of life - the RNA World
    • Gilbert,W. (1986) Origin of life - the RNA World. Nature, 319 618.
    • (1986) Nature , vol.319 , pp. 618
    • Gilbert, W.1
  • 4
    • 0028124128 scopus 로고
    • In-vitro evolution of new ribozymes with polynucleotide kinase-activity
    • Lorsch,J.R. and Szostak,J.W. (1994) In-vitro evolution of new ribozymes with polynucleotide kinase-activity. Nature, 371, 31-36.
    • (1994) Nature , vol.371 , pp. 31-36
    • Lorsch, J.R.1    Szostak, J.W.2
  • 5
    • 27744513650 scopus 로고    scopus 로고
    • A trans acting ribozyme that phosphorylates exogenous RNA
    • Saran,D., Nickens,D.G. and Burke,D.H. (2005) A trans acting ribozyme that phosphorylates exogenous RNA. Biochemistry, 44, 15007-15016.
    • (2005) Biochemistry , vol.44 , pp. 15007-15016
    • Saran, D.1    Nickens, D.G.2    Burke, D.H.3
  • 6
    • 0034838173 scopus 로고    scopus 로고
    • A ribozyme exclusively aminoacylates the 3′-hydroxyl group of the tRNA terminal adenosine
    • Saito,H. and Suga,H. (2001) A ribozyme exclusively aminoacylates the 3′-hydroxyl group of the tRNA terminal adenosine. J. Am. Chem. Soc. 123, 7178-7179.
    • (2001) J. Am. Chem. Soc , vol.123 , pp. 7178-7179
    • Saito, H.1    Suga, H.2
  • 7
    • 0028911845 scopus 로고
    • In-vitro evolution of a self-alkylating ribozyme
    • Wilson,C. and Szostak,J.W. (1995) In-vitro evolution of a self-alkylating ribozyme. Nature, 374, 777-782.
    • (1995) Nature , vol.374 , pp. 777-782
    • Wilson, C.1    Szostak, J.W.2
  • 8
    • 0029903899 scopus 로고    scopus 로고
    • In vitro selection of a novel catalytic RNA: Characterization of a sulfur alkylation reaction and interaction with a small peptide
    • Wecker,M., Smith,D. and Gold,L. (1996) In vitro selection of a novel catalytic RNA: Characterization of a sulfur alkylation reaction and interaction with a small peptide. RNA, 2, 982-994.
    • (1996) RNA , vol.2 , pp. 982-994
    • Wecker, M.1    Smith, D.2    Gold, L.3
  • 9
    • 0030963855 scopus 로고    scopus 로고
    • RNA-catalysed carbon-carbon bond formation
    • Tarasow,T.M., Tarasow,S.L. and Eaton,B.E. (1997) RNA-catalysed carbon-carbon bond formation. Nature, 389, 54-57.
    • (1997) Nature , vol.389 , pp. 54-57
    • Tarasow, T.M.1    Tarasow, S.L.2    Eaton, B.E.3
  • 12
    • 0028875594 scopus 로고
    • Kinetic and thermodynamic characterization of the reaction catalyzed by a polynucleotide kinase ribozyme
    • Lorsch,J.R. and Szostak,J.W. (1995) Kinetic and thermodynamic characterization of the reaction catalyzed by a polynucleotide kinase ribozyme. Biochemistry, 34, 15315-15327.
    • (1995) Biochemistry , vol.34 , pp. 15315-15327
    • Lorsch, J.R.1    Szostak, J.W.2
  • 13
    • 0031551113 scopus 로고    scopus 로고
    • 5′-RNA self-capping from guanosine diphosphate
    • Huang,F.Q. and Yarus,M. (1997) 5′-RNA self-capping from guanosine diphosphate. Biochemistry, 36, 6557-6563.
    • (1997) Biochemistry , vol.36 , pp. 6557-6563
    • Huang, F.Q.1    Yarus, M.2
  • 14
    • 33750312220 scopus 로고    scopus 로고
    • A general RNA-capping ribozyme retains stereochemistry during cap exchange
    • Zaher,H.S. and Unrau,P.J. (2006) A general RNA-capping ribozyme retains stereochemistry during cap exchange. J. Am. Chem. Soc., 128, 13894-13900.
    • (2006) J. Am. Chem. Soc , vol.128 , pp. 13894-13900
    • Zaher, H.S.1    Unrau, P.J.2
  • 15
    • 33751115760 scopus 로고    scopus 로고
    • Two independently selected capping ribozymes share similar substrate requirements
    • Zaher,H.S., Watkins,R.A. and Unrau,P.J. (2006) Two independently selected capping ribozymes share similar substrate requirements. RNA 12, 1949-1958.
    • (2006) RNA , vol.12 , pp. 1949-1958
    • Zaher, H.S.1    Watkins, R.A.2    Unrau, P.J.3
  • 16
    • 0035906978 scopus 로고    scopus 로고
    • RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension
    • Johnston,W.K., Unrau,P.J., Lawrence,M.S., Glasner,M.E. and Bartel,D.P. (2001) RNA-catalyzed RNA polymerization: Accurate and general RNA-templated primer extension. Science, 292, 1319-1325.
    • (2001) Science , vol.292 , pp. 1319-1325
    • Johnston, W.K.1    Unrau, P.J.2    Lawrence, M.S.3    Glasner, M.E.4    Bartel, D.P.5
  • 17
    • 0036015841 scopus 로고    scopus 로고
    • Continuous in vitro evolution of a ribozyme that catalyzes three successive nucleotidyl addition reactions
    • McGinness,K.E., Wright,M.C. and Joyce,G.F. (2002) Continuous in vitro evolution of a ribozyme that catalyzes three successive nucleotidyl addition reactions. Chem. Biol., 9, 585-596.
    • (2002) Chem. Biol , vol.9 , pp. 585-596
    • McGinness, K.E.1    Wright, M.C.2    Joyce, G.F.3
  • 18
    • 33745316842 scopus 로고    scopus 로고
    • Multiple-turnover thio-ATP hydrolase and phospho-enzyme intermediate formation activities catalyzed by an RNA enzyme
    • Saran,D., Held,D.M. and Burke,D.H. (2006) Multiple-turnover thio-ATP hydrolase and phospho-enzyme intermediate formation activities catalyzed by an RNA enzyme. Nucleic Acids Res., 34, 3201-3208.
    • (2006) Nucleic Acids Res , vol.34 , pp. 3201-3208
    • Saran, D.1    Held, D.M.2    Burke, D.H.3
  • 19
    • 0030898510 scopus 로고    scopus 로고
    • A general purpose RNA-cleaving DNA enzyme
    • Santoro,S.W. and Joyce,G.F. (1997) A general purpose RNA-cleaving DNA enzyme. Proc. Natl Acad. Sci. USA, 94, 4262-4266.
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 4262-4266
    • Santoro, S.W.1    Joyce, G.F.2
  • 20
    • 0024290398 scopus 로고
    • Interaction of transfer-RNAs and of phosphorothioate-substituted nucleic-acids with an organomercurial - probing the chemical environment of thiolated residues by affinity electrophoresis
    • Igloi,G.L. (1988) Interaction of transfer-RNAs and of phosphorothioate-substituted nucleic-acids with an organomercurial - probing the chemical environment of thiolated residues by affinity electrophoresis. Biochemistry, 27, 3842-3849.
    • (1988) Biochemistry , vol.27 , pp. 3842-3849
    • Igloi, G.L.1
  • 21
    • 2442626706 scopus 로고    scopus 로고
    • Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
    • Mathews,D.H., Disney,M.D., Childs,J.L., Schroeder,S.J., Zuker,M. and Turner,D.H. (2004) Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure. Proc. Natl Acad. Sci. USA, 101, 7287-7292.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , pp. 7287-7292
    • Mathews, D.H.1    Disney, M.D.2    Childs, J.L.3    Schroeder, S.J.4    Zuker, M.5    Turner, D.H.6
  • 22
    • 0021114721 scopus 로고
    • Synthesis of compositionally unique DNA by terminal deoxynucleotidyl transferase
    • Basu,M., Hegde,M.V. and Modak,M.J. (1983) Synthesis of compositionally unique DNA by terminal deoxynucleotidyl transferase. Biochem. Biophys. Res. Commun., 111, 1105-1112.
    • (1983) Biochem. Biophys. Res. Commun , vol.111 , pp. 1105-1112
    • Basu, M.1    Hegde, M.V.2    Modak, M.J.3
  • 23
    • 0029655319 scopus 로고    scopus 로고
    • Mechanistic constraints on diversity in human V(D)J recombination
    • Gauss,G.H. and Lieber,M.R. (1996) Mechanistic constraints on diversity in human V(D)J recombination. Mol. Cell. Biol., 16, 258-269.
    • (1996) Mol. Cell. Biol , vol.16 , pp. 258-269
    • Gauss, G.H.1    Lieber, M.R.2
  • 24
    • 0348136386 scopus 로고    scopus 로고
    • Generalized RNA-directed recombination of RNA
    • Riley,C.A. and Lehman,N. (2003) Generalized RNA-directed recombination of RNA. Chem. Biol., 10, 1233-1243.
    • (2003) Chem. Biol , vol.10 , pp. 1233-1243
    • Riley, C.A.1    Lehman, N.2
  • 25
    • 0029147392 scopus 로고
    • Structurally complex and highly-active RNA ligases derived from random RNA sequences
    • Ekland,E.H., Szostak,J.W. and Bartel,D.P. (1995) Structurally complex and highly-active RNA ligases derived from random RNA sequences. Science, 269, 364-370.
    • (1995) Science , vol.269 , pp. 364-370
    • Ekland, E.H.1    Szostak, J.W.2    Bartel, D.P.3
  • 26
    • 0035000517 scopus 로고    scopus 로고
    • Optimization and optimality of a short ribozyme ligase that joins non-Watson-Crick base pairings
    • Robertson,M.P., Hesselberth,J.R. and Ellington,A.D. (2001) Optimization and optimality of a short ribozyme ligase that joins non-Watson-Crick base pairings. RNA, 7, 513-523.
    • (2001) RNA , vol.7 , pp. 513-523
    • Robertson, M.P.1    Hesselberth, J.R.2    Ellington, A.D.3
  • 27
    • 0035032445 scopus 로고    scopus 로고
    • The effect of cytidine on the structure and function of an RNA ligase ribozyme
    • Rogers,J. and Joyce,G.F. (2001) The effect of cytidine on the structure and function of an RNA ligase ribozyme. RNA, 7, 395-404.
    • (2001) RNA , vol.7 , pp. 395-404
    • Rogers, J.1    Joyce, G.F.2
  • 28
    • 0033581938 scopus 로고    scopus 로고
    • A ribozyme that lacks cytidine
    • Rogers,J. and Joyce,G.F. (1999) A ribozyme that lacks cytidine. Nature, 402, 323-325.
    • (1999) Nature , vol.402 , pp. 323-325
    • Rogers, J.1    Joyce, G.F.2
  • 29
    • 0038210243 scopus 로고    scopus 로고
    • Deoxyribozymes that synthesize branched and lariat RNA
    • Wang,Y.M. and Silverman,S.K. (2003) Deoxyribozymes that synthesize branched and lariat RNA. J. Am. Chem. Soc., 125, 6880-6881.
    • (2003) J. Am. Chem. Soc , vol.125 , pp. 6880-6881
    • Wang, Y.M.1    Silverman, S.K.2
  • 30
    • 1442286924 scopus 로고    scopus 로고
    • A DNA enzyme that mimics the first step of RNA splicing
    • Coppins,R.L. and Silverman,S.K. (2004) A DNA enzyme that mimics the first step of RNA splicing. Nat. Struct. Mol. Biol., 11, 270-274.
    • (2004) Nat. Struct. Mol. Biol , vol.11 , pp. 270-274
    • Coppins, R.L.1    Silverman, S.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.