Fish species identification in surimi-based products

Journal of Agricultural and Food Chemistry

Volumn 55, Issue 9, 2007, Pages 3681-3685

  Pepe, Tiziana ^a   Trotta, Michele ^a   Di Marco, Isolina ^a   Anastasio, Aniello ^a   Bautista, José Manuel ^b   Cortesi, Maria Luisa ^a  

^a UNIVERSITY OF NAPLES FEDERICO II   (Italy)

^b UNIVERSIDAD COMPLUTENSE DE MADRID   (Spain)

Author keywords

Cytochrome b gene; Direct sequencing; Gadiformes; PCR; Surimi; Theragra chalcogramma

Indexed keywords

CYTOCHROME B; DNA;

ANIMAL; ARTICLE; CLASSIFICATION; DNA SEQUENCE; FISH; GADIFORMES; GENETICS; PHYLOGENY; POLYMERASE CHAIN REACTION; SEA FOOD;

ANIMALS; CYTOCHROMES B; DNA; FISH PRODUCTS; FISHES; GADIFORMES; PHYLOGENY; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA;

GADIDAE; GADIFORMES; MERLUCCIUS; MERLUCCIUS CAPENSIS; MERLUCCIUS HUBBSI; MERLUCCIUS MERLUCCIUS; POMACENTRIDAE; SPARIDAE; THERAGRA CHALCOGRAMMA;

EID: 34249328877     PISSN: 00218561     EISSN: None     Source Type: Journal    
DOI: 10.1021/jf063321o     Document Type: Article

References (43)

1. Lee, C. M. Surimi process technology. Food Technol. 1984, 69, 38-11.
2. Civera, T.; Parisi, E.; Bisio, C.; Giaccone, V.; Sibour, M. Un alimento per il future: Il surimi. Ind. Aliment. 1990, XXIX, 119-131.
3. Marko, P. B.; Lee, S. C.; Rice, A. M.; Gramling, J. M.; Fitzhenry, T. M.; McAalister, J. S.; Harper, G. R.; Moran, A. L. Mislabelling of a depleted reef fish. Nature 2004, 430, 309-310.
4. Lundstrom, R. Fish species identification by thin-layer polyacrylamide gel isoelectric focusing: Collaborative study. J. Assoc. Off. Anal. Chem. 1980, 63, 69-73.
5. Osman, M. A.; Ashoor, S. H.; Marsh, P. C. Liquid chromatographic identification of common fish species. J. Assoc. Off. Anal. Chem. 1987, 70, 618-625.
6. Piñeiro, C.; Barros-Velazquez, J.; Pérez-Martin, R. I.; Martinez, I.; Jacobsen, T.; Rehbein, H.; Kundiger, R.; Mendes, R.; Etienne, M.; Jérome, M.; Craig, A.; Mackie, I. M.; Jessen, F. Development of a sodium dodecyl sulfate-polyacrylamide gel electrophoresis reference method for the analysis and identification of fish species in raw and heat-processed samples: A collaborative study. Electrophoresis 1999, 20, 1425-1432.
7. Mackie, I.; Craig, A.; Etienne, M.; Jérome, M.; Fleurence, J.; Jessen, F.; Smelt, A.; Kruijt, A.; Yman, I. M.; Ferm, M.; Martinez, I.; Perez-Martin, R.; Piñeiro, C.; Rehbein, H.; Kundige, R. Species identification of smoked and graved fish products by sodium dodecylsulphate polyacrylamide gel electrophoresis, urea isoelectric focusing and native isoelectric focusing: A collaborative study. Food Chem. 2000, 71, 1-7.
8. Piñeiro, C.; Sotelo, C. G.; Medina, I.; Gallardo, J. M.; Pérez-Martìn, R. Reverse-phase HPLC as a method for the identification of gadoid fish species. Z. Lebensm. Unters. Forsch. A 1997, 204, 411-416.
9. Rehbein, H.; Kundiger, R.; Yman, I. M.; Ferm, M.; Etienne, M.; Jérome, M.; Craig, A.; Mackie, I.; Jessen, F.; Martinez, I.; Mendes, R.; Smelt, A.; Luten, J.; Pineiro, C.; Pérez-Martin, R. Species identification of cooked fish by urea isoelectric focusing and sodium dodecylsulfate polyacrylamide gel electrophoresis: a collaborative study. Food Chem. 1999, 67, 333-339.
10. Meyer, R.; Candrian, U. PCR-based DNA analysis for the identification and characterization of food components. Lebensm.-Wiss. Technol. 1996, 29, 1-9.
11. Mackie, I. M.; Pryde, S. E.; Gonzales-Sotelo, C.; Medina, I.; Peréz-Martín, R.; Quinteiro, J.; Rey-Mendez, M.; Rehbein, H. Challenges in the identification of species of canned fish. Trends Food Sci. Technol. 1999, 10, 9-14.
12. Bossier, P. Authentication of seafood products by DNA patterns. J. Food Sci. 1999, 64, 189-193.
13. Lockley, A. K.; Bardsley, R. G. DNA based-methods for food authentication. Trends Food Sci. Technol. 2000, 11, 67-77.
14. Pepe, T.; Trotta, M.; di Marco, I.; Cennamo, P.; Anastasio, A.; Cortesi, M. L. Mitochondrial cytochrome b DNA sequence variations: An approach to fish species identification in processed fish products. J. Food Prot. 2005, 68, 421-425.
15. Sotelo, C.; Gallardo, J. M.; Perez-Martin, R. I. Fish species identification in seafood products. Trends Food Sci. Technol. 1993, 4, 395-401.
16. Trotta, M.; Schonhuth, S.; Pepe, T.; Cortesi, M. L.; Puyet, A.; Bautista, J. M. Multiplex PCR method for use in real-time PCR for identification of fish fillets from grouper (Epinephelus and Mycteroperca species) and common substitute species. J. Agric. Food Chem. 2005, 53, 2039-2045.
17. Girish, P. S. Sequence analysis of mitochondrial 12S rRNA gene can identify meat species. Meat Sci. 2004, 551-556.
18. Hasegawa, M.; Kishino, H.; Yano, T. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 1985, 22, 160-174.
19. Jerome, M.; Lemaire, C.; Bautista, J. M.; Fleurence, J.; Etienne, M. Molecular phylogeny and species identification of sardines. J. Agric. Food Chem. 2003, 51, 43-50.
20. Karaiskou, N.; Triantafyllidis, A.; Triantafyllidis, C. Discrimination of three Trachurus species using both mitochondrial- and nuclear DNA approaches. J. Agric. Food Chem. 2003, 51, 4935-4940.
21. Sebastio, P.; Zanelli, P.; Neri, T. M. Identification of anchovy (Engraulis encrasicholus L.) and gilt sardine (Sardinella aurita) by polymerase chain reaction, sequence of their mitochondrial cytochrome b gene, and restriction analysis of polymerase chain reaction products in semipreserves. J. Agric. Food Chem. 2001, 49, 1194-1199.
22. Sotelo, C. G.; Calo-Mata, P.; Chapela, M. J.; Pérez-Martin, R. I.; Rehbein, H.; Hold, G. L.; Russell, V. J.; Pryde, S. E.; Quinteiro, J.; Izquierdo, M.; Rey-Méndez, M.; Rosa, C.; Santos, A. T. Identification of flatfish (Pleuronectiforme) species using DNA-based techniques. J. Agric. Food Chem. 2001, 49, 4562-4569.
23. Ebbehøj, F. K.; Thomsen, D. P. Species differentiation of heated meat products by DNA hybridization. Meat Sci. 1991, 30, 221-234.
24. Barlett, S. E.; Davidson, W. S. Identification of Thunnus tuna species by the polymerase chain reaction and direct sequence analysis of their mitochondrial cytochrome b genes. Can. J. Fish. Aquat. Sci. 1991, 48, 309-317.
25. Barlett, S. E.; Davidson, W. S. FINS (Forensically Informative Nucleotide Sequencing): A procedure for identifying the animal origin of biological specimens. BioTechniques 1992, 12, 408-411.
26. Bataille, M.; Crainic, K.; Leterreux, M.; Durigon, M.; de Mazancourt, P. Multiplex amplification of mitochondrial DNA for human and species identification in forensic evaluation. Forensic Sci. Int. 1999, 99, 165-170.
27. Carr, S. M.; Marshall, D. Detection of intra-specific DNA sequence variation in the mitochondrial cytochrome b gene of Atlantic cod (Gadus morhua) by the polymerase chain reaction. Can. J. Fish. Aquat. Sci. 1991, 48, 48-52.
28. Irwin, D. M.; Kocker, T. D.; Wilson, A. C. Evolution of the cytochrome b gene of mammals. J. Mol. Evol. 1991, 32, 128-144.
29. Kocher, T. D.; Thomas, W. K.; Meyer, A.; Edwards, S. V.; Pääbo, S.; Villabianca, F. X.; Wilson, A. C. Dynamics of mitochondrial DNA evolution in animals: Amplification and sequencing with conserved primers. Proc. Nat. Acad. Sci. U.S.A. 1989, 86, 6196-6200.
30. Russo, C.; Takezaki, N.; Nei, M. Efficiencies of different genes and tree-building methods in recovering a known vertebrate phylogeny. Mol. Biol. Evol. 1996, 13, 525-536.
31. Smith, M. F.; Patton, J. L. Variation in mitochondrial cytochrome b sequence in natural populations of South American akodontinae rodents (Muridae: Sigmodontinae). Mol. Biol. Evol. 1991, 8, 85-103.
32. Zehner, R.; Zimmermann, S.; Mebs, D. RFLP and sequence analysis of the cytochrome b gene of selected animals and man: Methodology and forensic application. Int. J. Leg. Med. 1998, 111, 323-327.
33. Holland, M. M.; Fisher, D. L.; Mitchell, L. G.; Rodriquez, W. C.; Canik, J. J.; Merril, C. R.; Weedn, V. W. Mitochondrial DNA sequence analysis of human skeletal remains: Identification of remains from Vietnam War. J. Forensic Sci. 1993, 38, 542-553.
34. Sullivan, K. M.; Hopgood, R.; Gill, P. Identification of human remains by amplification and automated sequencing of mitochondrial DNA. Int. J. Leg. Med. 1992, 105, 83-86.
35. Wilson, M. R.; Di Zinno, J. A.; Polanskey, D.; Replogle, J.; Budowle, B. Validation of mitochondrial DNA sequencing for forensic casework analysis. Int. J. Leg. Med. 1995, 108, 68-74.
36. Doyle, J. J.; Doyle, L. J. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 1987, 19, 11-15.
37. Arnason, E.; Palsson, S. Mitochondrial cytochrome b DNA sequence variation of atlantic cod Gadus morhua. Norway Mol. Ecol. 1996, 5, 715-724.
38. Johansen, S.; Guddal, P. H.; Johansen, T. Organization of the mitochondrial genome of Atlantic cod, Gadus morhua. Nucleic Acids Res. 1990, 18, 411-419.
39. Swofford, D. L. PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), version 4.08b; Computer program, Sinauer: Sunderland, MA, 2001.
40. Posada, D.; Crandall, K. A. Modeltest: Testing the model of DNA substitution. Bioinformatics 1998, 14, 817-818.
41. Roldan, M. I.; Garcìa-Marìn, J. L.; Utter, F. M.; Pla, C. Genetic relationships among Merluccius species. Heredity 1999, 83, 79-86.
42. Møller, P. R.; Jordan, A. D.; Gravlund, P.; Steffensen, J. F. Phylogenetic position of the cryopelagic codfish genus Arctogadus Drjagin, 1932 based on partial mitochondrial cytochrome b sequences. Polar Biol. 2002, 25, 342-349.
43. Schultz, L. P.; Welander, D. A. A review of the cods of the Northeastern Pacific with comparative notes on related species. Copeia 1935, 3, 127-139.