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Volumn 26, Issue 3, 2007, Pages 277-290

Selective photo-cross-linking of 2′-O-psoralen-conjugated oligonucleotide with RNAs having point mutations

Author keywords

Antisense oligonucleotide; Photo cross linking; Point mutation; Psoralen; Ras

Indexed keywords

2' O [(4,5',8 TRIMETHYL)PSORALEN 4' YLMETHYL]ADENOSINE; 6 N BENZOYL 2' O [(4,5',8 TRIMETHYL)PSORALEN 4' YLMETHYL]ADENOSINE; 6 N BENZOYL 5' O DIMETHOXYTRITYL 2' O [(4,5',8 TRIMETHYL)PSORALEN 4' YLMETHYL]ADENOSINE; 6 N BENZOYL 5' O DIMETHOXYTRITYL 2' O [(4,5',8 TRIMETHYL)PSORALEN 4' YLMETHYL]ADENOSINE 3' (2 CYANOETHYL N, N' DIISOPROPYLPHOSPHORAMIDITE); ADENOSINE DERIVATIVE; ANTISENSE OLIGODEOXYNUCLEOTIDE; OLIGONUCLEOTIDE; OLIGORIBONUCLEOTIDE; PSORALEN; PYRIMIDINE; UNCLASSIFIED DRUG;

EID: 34147130198     PISSN: 15257770     EISSN: 15322335     Source Type: Journal    
DOI: 10.1080/15257770701257434     Document Type: Article
Times cited : (19)

References (38)
  • 1
    • 7244245762 scopus 로고    scopus 로고
    • Finishing the euchromatic sequence of the human genome
    • International Human Genome Sequencing Consortium
    • International Human Genome Sequencing Consortium. Finishing the euchromatic sequence of the human genome. Nature 2004, 431, 931-945.
    • (2004) Nature , vol.431 , pp. 931-945
  • 2
    • 24644519490 scopus 로고    scopus 로고
    • The transcriptional landscape of the mammalian genome
    • The FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group
    • The FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group. The transcriptional landscape of the mammalian genome. Science 2005, 309, 1559-1563.
    • (2005) Science , vol.309 , pp. 1559-1563
  • 3
    • 24644472515 scopus 로고    scopus 로고
    • Antisense transcription in the mammalian transcriptome
    • RIKEN Genome Exploration Research Group, Genome Science Group and the FANTOM Consortium
    • RIKEN Genome Exploration Research Group, Genome Science Group and the FANTOM Consortium. Antisense transcription in the mammalian transcriptome. Science 2005, 309, 1564-1566.
    • (2005) Science , vol.309 , pp. 1564-1566
  • 4
    • 0037733977 scopus 로고    scopus 로고
    • Antisense technologies
    • Kurreck, J. Antisense technologies. Eur. J. Biochem. 2003, 207, 1628-1644.
    • (2003) Eur. J. Biochem , vol.207 , pp. 1628-1644
    • Kurreck, J.1
  • 5
    • 19344378192 scopus 로고    scopus 로고
    • Sequence-specific inhibition of small RNA function
    • Hutvagner, G.; Simard, M.J.; Mello, C.C.; Zamore, P.D. Sequence-specific inhibition of small RNA function. PLoS Biol. 2004, 2, 465-475.
    • (2004) PLoS Biol , vol.2 , pp. 465-475
    • Hutvagner, G.1    Simard, M.J.2    Mello, C.C.3    Zamore, P.D.4
  • 6
    • 1242318826 scopus 로고    scopus 로고
    • Sequence-specific inhibition of microRNA- and siRNA-induced RNA silencing
    • Meister, G.; Landthaler, M.; Dorsett, Y.; Tuschl, T. Sequence-specific inhibition of microRNA- and siRNA-induced RNA silencing. RNA 2006, 10, 544-550.
    • (2006) RNA , vol.10 , pp. 544-550
    • Meister, G.1    Landthaler, M.2    Dorsett, Y.3    Tuschl, T.4
  • 7
    • 22444437609 scopus 로고    scopus 로고
    • Serum response factor regulates a muscle-specific microRNA that targets Hand2 during cardiogenesis
    • Zhao, Y.; Samal, E.; Srivastava, D. Serum response factor regulates a muscle-specific microRNA that targets Hand2 during cardiogenesis. Nature 2005, 436, 214-220.
    • (2005) Nature , vol.436 , pp. 214-220
    • Zhao, Y.1    Samal, E.2    Srivastava, D.3
  • 9
    • 33645135862 scopus 로고    scopus 로고
    • Anti-miRNA oligonucleotides(AMOs) : Ammunition to target miRNAs implicated in human disease?
    • Weiler, J.;Hunziker, J.; Hall, J. Anti-miRNA oligonucleotides(AMOs) : Ammunition to target miRNAs implicated in human disease? Gene Therapy 2006, 13, 496-502.
    • (2006) Gene Therapy , vol.13 , pp. 496-502
    • Weiler, J.1    Hunziker, J.2    Hall, J.3
  • 10
    • 19444375104 scopus 로고    scopus 로고
    • DNA-based therapeutics and DNA delivery systems: A comprehensive review
    • Patil, S.D.; Rhodes, D.G.; Burgess, D.J. DNA-based therapeutics and DNA delivery systems: A comprehensive review. AAPS J . 2005, 7, E61-E77.
    • (2005) AAPS J , vol.7
    • Patil, S.D.1    Rhodes, D.G.2    Burgess, D.J.3
  • 12
    • 0033291446 scopus 로고    scopus 로고
    • Photodynamic antisense regulation using psoralen-conjugated oligo(nucleoside phosphorothioate)s (I). Growth regulation of cervical carcinoma cells
    • Iwase, R.; Yamayoshi, A.; Nishida, J.; Yamaoka, T.; Wake, N.; Murakami, A. Photodynamic antisense regulation using psoralen-conjugated oligo(nucleoside phosphorothioate)s (I). Growth regulation of cervical carcinoma cells. Nucleic Acids Symposium Series 1999, 42, 223-224.
    • (1999) Nucleic Acids Symposium Series , vol.42 , pp. 223-224
    • Iwase, R.1    Yamayoshi, A.2    Nishida, J.3    Yamaoka, T.4    Wake, N.5    Murakami, A.6
  • 13
    • 0021891866 scopus 로고
    • Psoralen as photoactive probes of nucleic acid structure and function: Organic chemistry, photochemistry, and biochemistry
    • Cimino, G.D.; Gamper, H.B.; Isaacs, S.; Hearst, J. Psoralen as photoactive probes of nucleic acid structure and function: Organic chemistry, photochemistry, and biochemistry. Ann. Rev. Biochem. 1985, 54, 1151-1193.
    • (1985) Ann. Rev. Biochem , vol.54 , pp. 1151-1193
    • Cimino, G.D.1    Gamper, H.B.2    Isaacs, S.3    Hearst, J.4
  • 14
    • 20344371233 scopus 로고    scopus 로고
    • Antisense therapy for cancer
    • Gleave,M.E.; Monia, B.P. Antisense therapy for cancer. Nat. Rev. Canc. 2005, 5, 468-479.
    • (2005) Nat. Rev. Canc , vol.5 , pp. 468-479
    • Gleave, M.E.1    Monia, B.P.2
  • 15
    • 0037733977 scopus 로고    scopus 로고
    • Antisense technologies
    • Kurreck, J. Antisense technologies. Eur. J. Biochem. 2003, 270, 1628-1644.
    • (2003) Eur. J. Biochem , vol.270 , pp. 1628-1644
    • Kurreck, J.1
  • 16
    • 0026073646 scopus 로고
    • Modified deoxyoligonucleotides stable to exonuclease degradation in serum
    • Shaw, J.P.; Kent, K.; Bird, J.; Fishback, J.; Froehler, B. Modified deoxyoligonucleotides stable to exonuclease degradation in serum. Nucleic Acids Res. 1991, 19, 747-750.
    • (1991) Nucleic Acids Res , vol.19 , pp. 747-750
    • Shaw, J.P.1    Kent, K.2    Bird, J.3    Fishback, J.4    Froehler, B.5
  • 17
    • 0035060451 scopus 로고    scopus 로고
    • Photodynamic antisense regulation of human cervical carcinoma cell growth using psoralen-conjugated oligo(nucleoside phosphorothioate)
    • Murakami, A.; Yamayoshi, A.; Iwase, R.; Nishida, J.; Yamaoka, T.; Wake, N. Photodynamic antisense regulation of human cervical carcinoma cell growth using psoralen-conjugated oligo(nucleoside phosphorothioate). Eur. J. Pharma. Sci. 2001, 13, 25-34.
    • (2001) Eur. J. Pharma. Sci , vol.13 , pp. 25-34
    • Murakami, A.1    Yamayoshi, A.2    Iwase, R.3    Nishida, J.4    Yamaoka, T.5    Wake, N.6
  • 19
    • 0023256456 scopus 로고
    • Prevalence of ras gene mutations in human colorectal cancers
    • Bos, J.L.; Fearon, E.R.; Hamilton, S.R. Prevalence of ras gene mutations in human colorectal cancers. Nature 1987, 327, 293-297.
    • (1987) Nature , vol.327 , pp. 293-297
    • Bos, J.L.1    Fearon, E.R.2    Hamilton, S.R.3
  • 21
    • 0025868669 scopus 로고
    • Specific inhibition of K-ras expression and tumorigenicity of lung cancer cells by antisense RNA
    • Mukhopadhyay, T.; Tainsky, M.; Cavender, A.C.; Roth, J.A. Specific inhibition of K-ras expression and tumorigenicity of lung cancer cells by antisense RNA. Cancer Res. 1991, 51, 1744-1748.
    • (1991) Cancer Res , vol.51 , pp. 1744-1748
    • Mukhopadhyay, T.1    Tainsky, M.2    Cavender, A.C.3    Roth, J.A.4
  • 22
    • 0027175360 scopus 로고
    • Prevention of orthotopic human lung cancer growth by intratracheal instillation of a retroviral antisense K-ras construct
    • Georges, R.N.; Mukhopadhyay, T.; Zhang, Y.; Yen, N.; Roth, J.A. Prevention of orthotopic human lung cancer growth by intratracheal instillation of a retroviral antisense K-ras construct. Cancer Res. 1993, 53, 1743-1746.
    • (1993) Cancer Res , vol.53 , pp. 1743-1746
    • Georges, R.N.1    Mukhopadhyay, T.2    Zhang, Y.3    Yen, N.4    Roth, J.A.5
  • 23
    • 0027759997 scopus 로고
    • Retroviral vector-mediated transduction of K-ras antisense RNA into human lung cancer cells inhibits expression of the malignant phenotype
    • Zhang, Y.; Mukhopadhyay, T.; Donehower, L.A.; George, R.N.; Roth, J.A. Retroviral vector-mediated transduction of K-ras antisense RNA into human lung cancer cells inhibits expression of the malignant phenotype. Human Gene Therapy 1993, 4, 451-460.
    • (1993) Human Gene Therapy , vol.4 , pp. 451-460
    • Zhang, Y.1    Mukhopadhyay, T.2    Donehower, L.A.3    George, R.N.4    Roth, J.A.5
  • 24
    • 0029124127 scopus 로고
    • Liposome-mediated in vivo gene transfer of antisense K-ras construct inhibits pancreatic tumor dissemination in the murine peritoneal cavity
    • Aoki, K.; Yoshida, T.; Sugimura, T.; Terada, M. Liposome-mediated in vivo gene transfer of antisense K-ras construct inhibits pancreatic tumor dissemination in the murine peritoneal cavity. Cancer Res. 1995. 55, 3810-3816.
    • (1995) Cancer Res , vol.55 , pp. 3810-3816
    • Aoki, K.1    Yoshida, T.2    Sugimura, T.3    Terada, M.4
  • 25
    • 0030838791 scopus 로고    scopus 로고
    • In vitro and in vivo activity of antisense inhibitors of ras: Potential for clinical development
    • Cowsert, L.M. In vitro and in vivo activity of antisense inhibitors of ras: Potential for clinical development. Anti-Cancer Drug Dev. 1997, 12, 359-371.
    • (1997) Anti-Cancer Drug Dev , vol.12 , pp. 359-371
    • Cowsert, L.M.1
  • 26
    • 0024276831 scopus 로고
    • Interaction of psoralen-derivatized oligodeoxyribonucleoside methylphosphonates with single-stranded DNA
    • Lee, B.L.; Murakami, A.; Blake, K.R.; Lin, S.; Miller, P.S. Interaction of psoralen-derivatized oligodeoxyribonucleoside methylphosphonates with single-stranded DNA. Biochemistry 1988, 27, 3197-3203.
    • (1988) Biochemistry , vol.27 , pp. 3197-3203
    • Lee, B.L.1    Murakami, A.2    Blake, K.R.3    Lin, S.4    Miller, P.S.5
  • 27
    • 0017338760 scopus 로고
    • Synthesis and characterization of new psoralen derivatives with superior photoreactivity with DNA and RNA
    • Isaacs, S.T.; Shen, C.J.; Hearst, J.E.; Rapoport, H. Synthesis and characterization of new psoralen derivatives with superior photoreactivity with DNA and RNA. Biochemistry 1977, 16, 1058-1064.
    • (1977) Biochemistry , vol.16 , pp. 1058-1064
    • Isaacs, S.T.1    Shen, C.J.2    Hearst, J.E.3    Rapoport, H.4
  • 28
    • 0001518039 scopus 로고
    • Transient protection: Efficient one-flask syntheses of protected deoxynucleosides
    • Ti, G.S.; Gaffney, B.L.; Jones, R.A. Transient protection: Efficient one-flask syntheses of protected deoxynucleosides. J. Am. Chem. Soc. 1982, 104, 1316-1319.
    • (1982) J. Am. Chem. Soc , vol.104 , pp. 1316-1319
    • Ti, G.S.1    Gaffney, B.L.2    Jones, R.A.3
  • 29
    • 0026341239 scopus 로고
    • Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide
    • Nielsen, P.E.; Egholm, M.; Berg, R.H.; Buchardt, O. Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide. Science 1991, 254, 1497-1500.
    • (1991) Science , vol.254 , pp. 1497-1500
    • Nielsen, P.E.1    Egholm, M.2    Berg, R.H.3    Buchardt, O.4
  • 30
    • 0032699477 scopus 로고    scopus 로고
    • Morpholino antisense oligomers: The case for an RNase H-independent structural type
    • Summerton, J. Morpholino antisense oligomers: The case for an RNase H-independent structural type. Biochim. Biophys. Acta. 1999, 1489, 141-158.
    • (1999) Biochim. Biophys. Acta , vol.1489 , pp. 141-158
    • Summerton, J.1
  • 31
    • 0032560835 scopus 로고    scopus 로고
    • Stability and structural features of the duplexes containing nucleoside analogues with a fixed N-type conformation, 2′-O,4′-C- methyleneribonucleosides
    • Obika, S.; Nanbu, D.; Hari, Y.; Andoh, J.; Morio, K.; Doi, T.; Imanishi, T. Stability and structural features of the duplexes containing nucleoside analogues with a fixed N-type conformation, 2′-O,4′-C- methyleneribonucleosides. Tetrahedron Lett. 1998, 39, 5401-5404.
    • (1998) Tetrahedron Lett , vol.39 , pp. 5401-5404
    • Obika, S.1    Nanbu, D.2    Hari, Y.3    Andoh, J.4    Morio, K.5    Doi, T.6    Imanishi, T.7
  • 32
    • 0032473890 scopus 로고    scopus 로고
    • Koshkin, A.A.; Singh, S.K.; Nielsen, P.; Rajwanishi, V.K.; Kumar, R.; Meldgaard, M.; Olsen, C.E.; Wengel, J. Novel convenient syntheses of LNA [2.2.1]bicyclo nucleosides. Tetrahedron 1998, 54, 3607-3630.
    • Koshkin, A.A.; Singh, S.K.; Nielsen, P.; Rajwanishi, V.K.; Kumar, R.; Meldgaard, M.; Olsen, C.E.; Wengel, J. Novel convenient syntheses of LNA [2.2.1]bicyclo nucleosides. Tetrahedron 1998, 54, 3607-3630.
  • 34
    • 0026620007 scopus 로고
    • AMBER* torsional parameters for the peptide backbone
    • McDonald, D.Q.; Still, W.C. AMBER* torsional parameters for the peptide backbone. Tetrahedron Lett. 1992, 33, 7743-7746.
    • (1992) Tetrahedron Lett , vol.33 , pp. 7743-7746
    • McDonald, D.Q.1    Still, W.C.2
  • 35
    • 0019335633 scopus 로고
    • Photophysical properties of aminoethylpsoralen in presence and absence of DNA
    • Salet, C.; DeSa E Melo TM, Bensasson, R.; Land, E. J. Photophysical properties of aminoethylpsoralen in presence and absence of DNA. Biochem. Biophys. Act. 1980, 607, 379-383.
    • (1980) Biochem. Biophys. Act , vol.607 , pp. 379-383
    • Salet, C.1    DeSa, E.2    Melo, T.M.3    Bensasson, R.4    Land, E.J.5
  • 37
    • 0142173075 scopus 로고    scopus 로고
    • Small RNAs with imperfect match to endogenous mRNA repress translation
    • Saxene, S.; Jonsson, Z.O.; Dutta, A. Small RNAs with imperfect match to endogenous mRNA repress translation. J. Biol. Chem. 2003, 278, 44312-44319.
    • (2003) J. Biol. Chem , vol.278 , pp. 44312-44319
    • Saxene, S.1    Jonsson, Z.O.2    Dutta, A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.