-
1
-
-
0031933027
-
Mathematical modeling and analysis in biochemical engineering: Past accomplishments and future opportunities
-
Bailey, J. E. (1998) Mathematical modeling and analysis in biochemical engineering: past accomplishments and future opportunities. Biotechnol. Prog. 14, 8-20.
-
(1998)
Biotechnol. Prog
, vol.14
, pp. 8-20
-
-
Bailey, J.E.1
-
2
-
-
4444352969
-
Understanding in vivo benzenoid metabolism in petunia petal tissue
-
Boatright, J., Negre, F., Chen, X., Kish, C. M., Wood, B., Peel, G., Orlova, I., Gang, D., Rhodes, D. and Dudareva, N. (2004) Understanding in vivo benzenoid metabolism in petunia petal tissue. Plant Physiol. 135, 1993-2011.
-
(2004)
Plant Physiol
, vol.135
, pp. 1993-2011
-
-
Boatright, J.1
Negre, F.2
Chen, X.3
Kish, C.M.4
Wood, B.5
Peel, G.6
Orlova, I.7
Gang, D.8
Rhodes, D.9
Dudareva, N.10
-
3
-
-
0001556878
-
The accumulation of cinnamic acid amides in the cell walls of potato tissue as an early response to fungal attack
-
R. Wood, ed, New York: Plenum Press, pp
-
Clarke, D. D. (1982) The accumulation of cinnamic acid amides in the cell walls of potato tissue as an early response to fungal attack. In Active Defence Mechanisms in Plants (R. Wood, ed.). New York: Plenum Press, pp. 321-322.
-
(1982)
Active Defence Mechanisms in Plants
, pp. 321-322
-
-
Clarke, D.D.1
-
4
-
-
0034233268
-
GC-MS analysis of amino acids rapidly provides rich information for isotopomer balancing
-
Dauner, M. and Sauer, U. (2000) GC-MS analysis of amino acids rapidly provides rich information for isotopomer balancing. Biotechnol. Prog. 16, 642-649.
-
(2000)
Biotechnol. Prog
, vol.16
, pp. 642-649
-
-
Dauner, M.1
Sauer, U.2
-
5
-
-
0003418240
-
Biological Reaction Engineering
-
2nd edn. Weinheim, Germany: Wiley-VCH
-
Dunn, I. J., Heinzle, E., Ingham, J. and Prenosil, J. E. (2003) Biological Reaction Engineering. Dynamic Modelling Fundamentals with Simulation Exercises, 2nd edn. Weinheim, Germany: Wiley-VCH.
-
(2003)
Dynamic Modelling Fundamentals with Simulation Exercises
-
-
Dunn, I.J.1
Heinzle, E.2
Ingham, J.3
Prenosil, J.E.4
-
7
-
-
0034119624
-
Mathematical modelling of metabolism
-
Giersch, C. (2000) Mathematical modelling of metabolism. Curr. Opin. Plant Biol. 3, 249-253.
-
(2000)
Curr. Opin. Plant Biol
, vol.3
, pp. 249-253
-
-
Giersch, C.1
-
8
-
-
0036918772
-
Starch biosynthesis and intermediary metabolism in maize kernels. Quantitative analysis of metabolite flux by nuclear magnetic resonance
-
Glawischnig, E., Gierl, A., Tomas, A., Bacher, A. and Eisenreich, W. (2002) Starch biosynthesis and intermediary metabolism in maize kernels. Quantitative analysis of metabolite flux by nuclear magnetic resonance. Plant Physiol. 130, 1717-1727.
-
(2002)
Plant Physiol
, vol.130
, pp. 1717-1727
-
-
Glawischnig, E.1
Gierl, A.2
Tomas, A.3
Bacher, A.4
Eisenreich, W.5
-
9
-
-
0036334847
-
Plant metabolic engineering. Entering the S curve
-
Hanson, A. D. and Shanks, J. V. (2002) Plant metabolic engineering. Entering the S curve. Metab. Eng. 4, 1-2.
-
(2002)
Metab. Eng
, vol.4
, pp. 1-2
-
-
Hanson, A.D.1
Shanks, J.V.2
-
10
-
-
0742323124
-
New stable isotope-mass spectrometric techniques for measuring fluxes through intact metabolic pathways in mammalian systems: Introduction of moving pictures into functional genomics and biochemical phenotyping
-
Hellerstein, M. K. (2004) New stable isotope-mass spectrometric techniques for measuring fluxes through intact metabolic pathways in mammalian systems: introduction of moving pictures into functional genomics and biochemical phenotyping. Metab. Eng. 6, 85-100.
-
(2004)
Metab. Eng
, vol.6
, pp. 85-100
-
-
Hellerstein, M.K.1
-
11
-
-
0033038503
-
Mass isotopomer distribution analysis at 80 years: Theoretical, analytic, and experimental considerations
-
Hellerstein, M. K. and Neese, R. A. (1999) Mass isotopomer distribution analysis at 80 years: theoretical, analytic, and experimental considerations. Am. J. Physiol. 276, E1146-E1170.
-
(1999)
Am. J. Physiol
, vol.276
-
-
Hellerstein, M.K.1
Neese, R.A.2
-
13
-
-
0000608688
-
Changes in the accumulation of soluble and cell wall-bound phenolics in elicitor-treated cell suspension cultures and fungus-infected leaves of Solanum tuberosum
-
Keller, H., Hohlfeld, H., Wray, V., Hahlbrock, K., Scheel, D. and Strack, D. (1996) Changes in the accumulation of soluble and cell wall-bound phenolics in elicitor-treated cell suspension cultures and fungus-infected leaves of Solanum tuberosum. Phytochemistry, 42, 389-396.
-
(1996)
Phytochemistry
, vol.42
, pp. 389-396
-
-
Keller, H.1
Hohlfeld, H.2
Wray, V.3
Hahlbrock, K.4
Scheel, D.5
Strack, D.6
-
14
-
-
0037795745
-
The oxidative pentose phosphate pathway: Structure and organisation
-
Kruger, N. J. and von Schaewen, A. (2003) The oxidative pentose phosphate pathway: structure and organisation. Curr. Opin. Plant Biol. 6, 236-246.
-
(2003)
Curr. Opin. Plant Biol
, vol.6
, pp. 236-246
-
-
Kruger, N.J.1
von Schaewen, A.2
-
15
-
-
0033923905
-
Beta-1,3- glucooligosaccharide induced activation of four enzymes responsible for N-p-coumaroyloctopamine biosynthesis in potato (Solanum tuberosum cv.) tuber tissue
-
Matsuda, F., Miyagawa, H. and Ueno, T. (2000) Beta-1,3- glucooligosaccharide induced activation of four enzymes responsible for N-p-coumaroyloctopamine biosynthesis in potato (Solanum tuberosum cv.) tuber tissue. Z. Naturforsch. C, 55, 373-382.
-
(2000)
Z. Naturforsch. C
, vol.55
, pp. 373-382
-
-
Matsuda, F.1
Miyagawa, H.2
Ueno, T.3
-
16
-
-
0038685762
-
Metabolic flux analysis of the phenylpropanoid pathway in wound-healing potato tuber tissue using stable isotope-labeled tracer and LC-MS spectroscopy
-
Matsuda, F., Morino, K., Miyashita, M. and Miyagawa, H. (2003) Metabolic flux analysis of the phenylpropanoid pathway in wound-healing potato tuber tissue using stable isotope-labeled tracer and LC-MS spectroscopy. Plant Cell Physiol. 44, 510-517.
-
(2003)
Plant Cell Physiol
, vol.44
, pp. 510-517
-
-
Matsuda, F.1
Morino, K.2
Miyashita, M.3
Miyagawa, H.4
-
17
-
-
17144423651
-
Metabolic flux analysis of the phenylpropanoid pathway in elicitor-treated potato tuber tissue
-
Matsuda, F., Morino, K., Ano, R., Kuzawa, M., Wakasa, K. and Miyagawa, H. (2005) Metabolic flux analysis of the phenylpropanoid pathway in elicitor-treated potato tuber tissue. Plant Cell Physiol. 46, 454-466.
-
(2005)
Plant Cell Physiol
, vol.46
, pp. 454-466
-
-
Matsuda, F.1
Morino, K.2
Ano, R.3
Kuzawa, M.4
Wakasa, K.5
Miyagawa, H.6
-
18
-
-
0033829610
-
Metabolic modeling identifies key constraints on an engineered glycine betaine synthesis pathway in tobacco
-
McNeil, S. D., Rhodes, D., Russell, B. L., Nuccio, M. L., Shachar-Hill, Y. and Hanson, A. D. (2000) Metabolic modeling identifies key constraints on an engineered glycine betaine synthesis pathway in tobacco. Plant Physiol. 124, 153-162.
-
(2000)
Plant Physiol
, vol.124
, pp. 153-162
-
-
McNeil, S.D.1
Rhodes, D.2
Russell, B.L.3
Nuccio, M.L.4
Shachar-Hill, Y.5
Hanson, A.D.6
-
19
-
-
0010262004
-
Induction of N-p-coumaroyloctopamine in potato tuber disks by β-1,3-glucooligosaccharide
-
Miyagawa, H., Ishihara, A., Lim, C.-H., Ueno, T. and Furuichi, N. (1998) Induction of N-p-coumaroyloctopamine in potato tuber disks by β-1,3-glucooligosaccharide. J. Pestic. Sci. 23, 49-53.
-
(1998)
J. Pestic. Sci
, vol.23
, pp. 49-53
-
-
Miyagawa, H.1
Ishihara, A.2
Lim, C.-H.3
Ueno, T.4
Furuichi, N.5
-
20
-
-
0002083175
-
Optimal strategy for identification of monod-type models by fed-batch experiments. Computer application in fermentation technology
-
N. Fish, R. Fox and N. Thornhill, eds, Barking, UK: Elsevier, pp
-
Munack, A. (1987) Optimal strategy for identification of monod-type models by fed-batch experiments. Computer application in fermentation technology. In Modelling and Control of Biochemical Processes (N. Fish, R. Fox and N. Thornhill, eds). Barking, UK: Elsevier, pp. 195-204.
-
(1987)
Modelling and Control of Biochemical Processes
, pp. 195-204
-
-
Munack, A.1
-
21
-
-
0027141824
-
Wound-induced tyramine hydroxycinnamoyl transferase in potato (Solanum tuberosum) tuber discs
-
Negrel, J., Javelle, F. and Paynot, M. (1993) Wound-induced tyramine hydroxycinnamoyl transferase in potato (Solanum tuberosum) tuber discs. J. Plant Physiol. 142, 518-524.
-
(1993)
J. Plant Physiol
, vol.142
, pp. 518-524
-
-
Negrel, J.1
Javelle, F.2
Paynot, M.3
-
22
-
-
0032485833
-
Metabolic engineering: Techniques for analysis of targets for genetic manipulations
-
Nielsen, J. (1998) Metabolic engineering: techniques for analysis of targets for genetic manipulations. Biotechnol. Bioeng. 58, 125-132.
-
(1998)
Biotechnol. Bioeng
, vol.58
, pp. 125-132
-
-
Nielsen, J.1
-
23
-
-
0034503411
-
Choline import into chloroplasts limits glycine betaine synthesis in tobacco: Analysis of plants engineered with a chloroplastic or a cytosolic pathway
-
Nuccio, M. L., McNeil, S. D., Ziemak, M. J., Hanson, A. D., Jain, R. K. and Selvaraj, G. (2000) Choline import into chloroplasts limits glycine betaine synthesis in tobacco: analysis of plants engineered with a chloroplastic or a cytosolic pathway. Metab. Eng. 2, 300-311.
-
(2000)
Metab. Eng
, vol.2
, pp. 300-311
-
-
Nuccio, M.L.1
McNeil, S.D.2
Ziemak, M.J.3
Hanson, A.D.4
Jain, R.K.5
Selvaraj, G.6
-
24
-
-
0036606568
-
Control analysis of lipid biosynthesis in tissue cultures from oil crops shows that flux control is shared between fatty acid synthesis and lipid assembly
-
Ramli, U. S., Baker, D. S., Quant, P. A. and Harwood, J. L. (2002) Control analysis of lipid biosynthesis in tissue cultures from oil crops shows that flux control is shared between fatty acid synthesis and lipid assembly. Biochem. J. 364, 393-401.
-
(2002)
Biochem. J
, vol.364
, pp. 393-401
-
-
Ramli, U.S.1
Baker, D.S.2
Quant, P.A.3
Harwood, J.L.4
-
25
-
-
33644853940
-
Measuring multiple fluxes through plant metabolic networks
-
Ratcliffe, R. G. and Shachar-Hill, Y. (2006) Measuring multiple fluxes through plant metabolic networks. Plant J. 45, 490-511.
-
(2006)
Plant J
, vol.45
, pp. 490-511
-
-
Ratcliffe, R.G.1
Shachar-Hill, Y.2
-
26
-
-
0035448427
-
Analysis of sucrose accumulation in the sugar cane culm on the basis of in vitro kinetic data
-
Rohwer, J. M. and Botha, F. C. (2001) Analysis of sucrose accumulation in the sugar cane culm on the basis of in vitro kinetic data. Biochem. J. 358, 437-445.
-
(2001)
Biochem. J
, vol.358
, pp. 437-445
-
-
Rohwer, J.M.1
Botha, F.C.2
-
27
-
-
0037113867
-
The metabolic architecture of plant cells. Stability of central metabolism and flexibility of anabolic pathways during the growth cycle of tomato cells
-
Rontein, D., Dieuaide-Noubhani, M., Dufourc, E. J., Raymond, P. and Rolin, D. (2002) The metabolic architecture of plant cells. Stability of central metabolism and flexibility of anabolic pathways during the growth cycle of tomato cells. J. Biol. Chem. 277, 43948-43960.
-
(2002)
J. Biol. Chem
, vol.277
, pp. 43948-43960
-
-
Rontein, D.1
Dieuaide-Noubhani, M.2
Dufourc, E.J.3
Raymond, P.4
Rolin, D.5
-
28
-
-
0033979908
-
Strategies for metabolic flux analysis in plants using isotope labelling
-
Roscher, A., Kruger, N. J. and Ratcliffe, R. G. (2000) Strategies for metabolic flux analysis in plants using isotope labelling. J. Biotechnol. 77, 81-102.
-
(2000)
J. Biotechnol
, vol.77
, pp. 81-102
-
-
Roscher, A.1
Kruger, N.J.2
Ratcliffe, R.G.3
-
29
-
-
0031900191
-
Elicitor-stimulated biosynthesis of hydroxycinnamoyltyramines in cell suspension cultures of Solanum tuberosum
-
Schmidt, A., Scheel, D. and Strack, D. (1998) Elicitor-stimulated biosynthesis of hydroxycinnamoyltyramines in cell suspension cultures of Solanum tuberosum. Planta, 205, 51-55.
-
(1998)
Planta
, vol.205
, pp. 51-55
-
-
Schmidt, A.1
Scheel, D.2
Strack, D.3
-
30
-
-
0033548080
-
Cloning and expression of a potato cDNA encoding hydroxycinnamoyl-CoA:tyramine N-(hydroxycinnamoyl) transferase
-
Schmidt, A., Grimm, R., Schmidt, J., Scheel, D., Strack, D. and Rosahl, S. (1999) Cloning and expression of a potato cDNA encoding hydroxycinnamoyl-CoA:tyramine N-(hydroxycinnamoyl) transferase. J. Biol. Chem. 274, 4273-4280.
-
(1999)
J. Biol. Chem
, vol.274
, pp. 4273-4280
-
-
Schmidt, A.1
Grimm, R.2
Schmidt, J.3
Scheel, D.4
Strack, D.5
Rosahl, S.6
-
31
-
-
0042531959
-
A flux model of glycolysis and the oxidative pentosephosphate pathway in developing Brassica napus embryos
-
Schwender, J., Ohlrogge, J. B. and Shachar-Hill, Y. (2003) A flux model of glycolysis and the oxidative pentosephosphate pathway in developing Brassica napus embryos. J. Biol. Chem. 278, 29442-29453.
-
(2003)
J. Biol. Chem
, vol.278
, pp. 29442-29453
-
-
Schwender, J.1
Ohlrogge, J.B.2
Shachar-Hill, Y.3
-
32
-
-
0001635921
-
-
Sims, A. P. and Folkes, B. F. (1964) A kinetic study of the assimilation of (15n)-ammonia and the synthesis of amino acids in an exponentially growing culture of Candida utilis. Proc. R. Soc. Lond. B Biol. Sci. 159, 479-502.
-
Sims, A. P. and Folkes, B. F. (1964) A kinetic study of the assimilation of (15n)-ammonia and the synthesis of amino acids in an exponentially growing culture of Candida utilis. Proc. R. Soc. Lond. B Biol. Sci. 159, 479-502.
-
-
-
-
33
-
-
0037093109
-
Simultaneous determination of anionic intermediates for Bacillus subtilis metabolic pathways by capillary electrophoresis electrospray ionization mass spectrometry
-
Soga, T., Ueno, Y., Naraoka, H., Ohashi, Y., Tomita, M. and Nishioka, T. (2002) Simultaneous determination of anionic intermediates for Bacillus subtilis metabolic pathways by capillary electrophoresis electrospray ionization mass spectrometry. Anal. Chem. 74, 2233-2239.
-
(2002)
Anal. Chem
, vol.74
, pp. 2233-2239
-
-
Soga, T.1
Ueno, Y.2
Naraoka, H.3
Ohashi, Y.4
Tomita, M.5
Nishioka, T.6
-
34
-
-
0004218135
-
-
San Diego, CA, USA: Academic Press
-
Stephanopoulos, G. N., Aristidou, A. A. and Nielsen, J. (1998) Metabolic Engineering: Principles and Methodologies. San Diego, CA, USA: Academic Press.
-
(1998)
Metabolic Engineering: Principles and Methodologies
-
-
Stephanopoulos, G.N.1
Aristidou, A.A.2
Nielsen, J.3
-
35
-
-
0037594172
-
Computational Analysis of Biochemical Systems
-
Cambridge, UK: Cambridge University Press
-
Voit, E. (2000) Computational Analysis of Biochemical Systems. A Practical Guide for Biochemists and Molecular Biologists. Cambridge, UK: Cambridge University Press.
-
(2000)
A Practical Guide for Biochemists and Molecular Biologists
-
-
Voit, E.1
-
36
-
-
0842343470
-
13C flux analysis: Mass isotope correction, data consistency checking, and precursor relationships
-
13C flux analysis: mass isotope correction, data consistency checking, and precursor relationships. Biotechnol. Bioeng. 85, 259-268.
-
(2004)
Biotechnol. Bioeng
, vol.85
, pp. 259-268
-
-
Wahl, S.A.1
Dauner, M.2
Wiechert, W.3
-
37
-
-
0034741983
-
13C metabolic flux analysis
-
13C metabolic flux analysis. Metab. Eng. 3, 195-206.
-
(2001)
Metab. Eng
, vol.3
, pp. 195-206
-
-
Wiechert, W.1
-
39
-
-
0036365460
-
Metabolic flux analysis using mass spectrometry
-
Wittmann, C. (2002) Metabolic flux analysis using mass spectrometry. Adv. Biochem. Eng. Biotechnol. 74, 39-64.
-
(2002)
Adv. Biochem. Eng. Biotechnol
, vol.74
, pp. 39-64
-
-
Wittmann, C.1
-
40
-
-
0033586461
-
Mass spectrometry for metabolic flux analysis
-
Wittmann, C. and Heinzle, E. (1999) Mass spectrometry for metabolic flux analysis. Biotechnol. Bioeng. 62, 739-750.
-
(1999)
Biotechnol. Bioeng
, vol.62
, pp. 739-750
-
-
Wittmann, C.1
Heinzle, E.2
-
41
-
-
0035002653
-
Application of MALDI-TOF MS to lysine-producing Corynebacterium glutamicum: A novel approach for metabolic flux analysis
-
Wittmann, C. and Heinzle, E. (2001a) Application of MALDI-TOF MS to lysine-producing Corynebacterium glutamicum: a novel approach for metabolic flux analysis. Eur. J. Biochem. 268, 2441-2455.
-
(2001)
Eur. J. Biochem
, vol.268
, pp. 2441-2455
-
-
Wittmann, C.1
Heinzle, E.2
-
42
-
-
0034811345
-
Modeling and experimental design for metabolic flux analysis of lysine-producing Corynebacteria by mass spectrometry
-
Wittmann, C. and Heinzle, E. (2001b) Modeling and experimental design for metabolic flux analysis of lysine-producing Corynebacteria by mass spectrometry. Metab. Eng. 3, 173-191.
-
(2001)
Metab. Eng
, vol.3
, pp. 173-191
-
-
Wittmann, C.1
Heinzle, E.2
|