-
1
-
-
0037458085
-
Microarrays: The use of oligonucleotides and cDNA for the analysis of gene expression
-
Barrett, J. C., and E. S. Kawasaki. 2003. Microarrays: the use of oligonucleotides and cDNA for the analysis of gene expression. Drug Discov. Today. 8:134-141.
-
(2003)
Drug Discov. Today
, vol.8
, pp. 134-141
-
-
Barrett, J.C.1
Kawasaki, E.S.2
-
2
-
-
2942577836
-
Cross-platform comparison and visualisation of gene expression data using co-inertia analysis
-
Culhane, A. C., G. Perrière, and D. G. Higgins. 2003. Cross-platform comparison and visualisation of gene expression data using co-inertia analysis. BMC Bioinformatics. 4:59.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 59
-
-
Culhane, A.C.1
Perrière, G.2
Higgins, D.G.3
-
3
-
-
4143151607
-
Current issues for DNA microarrays: Platform comparison, double linear amplification, and universal RNA reference
-
Park, P. J., Y. A. Cao, S. Y. Lee, J.-W. Kim, M. S. Chang, R. Hart, and S. Choi. 2004. Current issues for DNA microarrays: platform comparison, double linear amplification, and universal RNA reference. J. Biotechnol. 112:225-245.
-
(2004)
J. Biotechnol
, vol.112
, pp. 225-245
-
-
Park, P.J.1
Cao, Y.A.2
Lee, S.Y.3
Kim, J.-W.4
Chang, M.S.5
Hart, R.6
Choi, S.7
-
4
-
-
31444431754
-
Reliability and reproducibility issues in DNA microarray measurements
-
Draghici, S., P. Khatri, A. C. Eklund, and Z. Szallasi. 2006. Reliability and reproducibility issues in DNA microarray measurements. Trends Genet. 22:101-109.
-
(2006)
Trends Genet
, vol.22
, pp. 101-109
-
-
Draghici, S.1
Khatri, P.2
Eklund, A.C.3
Szallasi, Z.4
-
5
-
-
0033578928
-
Universal DNA microarray method for multiplex detection of low abundance point mutations
-
Gerry, N. P., N. E. Witowski, J. Day, R. P. Hammer, G. Barany, and F. Barany. 1999. Universal DNA microarray method for multiplex detection of low abundance point mutations. J. Mol. Biol. 292:251-262.
-
(1999)
J. Mol. Biol
, vol.292
, pp. 251-262
-
-
Gerry, N.P.1
Witowski, N.E.2
Day, J.3
Hammer, R.P.4
Barany, G.5
Barany, F.6
-
6
-
-
0035654137
-
Accessing genetic variation: Genotyping single nucleotide polymorphisms
-
Syvänen, A.-C. 2001. Accessing genetic variation: genotyping single nucleotide polymorphisms. Nat. Rev. Genet. 2:930-942.
-
(2001)
Nat. Rev. Genet
, vol.2
, pp. 930-942
-
-
Syvänen, A.-C.1
-
7
-
-
0035823170
-
Advances in the analysis of DNA sequence variations using oligonucleotide microchip technology
-
Tillib, S. V., and A. D. Mirzabekov. 2001. Advances in the analysis of DNA sequence variations using oligonucleotide microchip technology. Curr. Opin. Biotechnol. 12:53-58.
-
(2001)
Curr. Opin. Biotechnol
, vol.12
, pp. 53-58
-
-
Tillib, S.V.1
Mirzabekov, A.D.2
-
8
-
-
0028881098
-
The biophysics of DNA hybridization with immobilized oligonucleotide probes
-
Chan, V., D. J. Graves, and S. McKenzie. 1995. The biophysics of DNA hybridization with immobilized oligonucleotide probes. Biophys. J. 69:2243-2255.
-
(1995)
Biophys. J
, vol.69
, pp. 2243-2255
-
-
Chan, V.1
Graves, D.J.2
McKenzie, S.3
-
9
-
-
0029910179
-
Theoretical analysis of the kinetics of DNA hybridization with gel-immobilized oligonucleotides
-
Livshits, M. A., and A. D. Mirzabekov. 1996. Theoretical analysis of the kinetics of DNA hybridization with gel-immobilized oligonucleotides. Biophys. J. 71:2795-2801.
-
(1996)
Biophys. J
, vol.71
, pp. 2795-2801
-
-
Livshits, M.A.1
Mirzabekov, A.D.2
-
10
-
-
85036155972
-
Coulomb blockage of hybridization in two-dimensional DNA arrays
-
Vainrub, A., and M. B. Pettitt. 2002. Coulomb blockage of hybridization in two-dimensional DNA arrays. Phys. Rev. E. 66:041905.
-
(2002)
Phys. Rev. E
, vol.66
, pp. 041905
-
-
Vainrub, A.1
Pettitt, M.B.2
-
11
-
-
0037215734
-
The importance of thermodynamic equilibrium for high throughput gene expression arrays
-
Bhanot, G., Y. Louzoun, J. Zhu, and C. DeLisi. 2003. The importance of thermodynamic equilibrium for high throughput gene expression arrays. Biophys. J. 84:124-135.
-
(2003)
Biophys. J
, vol.84
, pp. 124-135
-
-
Bhanot, G.1
Louzoun, Y.2
Zhu, J.3
DeLisi, C.4
-
12
-
-
0037934649
-
Modeling of DNA microarray data by using physical properties of hybridization
-
Held, G. A., G. Grinstein, and Y. Tu. 2003. Modeling of DNA microarray data by using physical properties of hybridization. Proc. Natl. Acad. Sci. USA. 100:7575-7580.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 7575-7580
-
-
Held, G.A.1
Grinstein, G.2
Tu, Y.3
-
13
-
-
0038729666
-
A model of molecular interactions on short oligonucleotide microarrays
-
Zhang, L., M. F. Miles, and K. D. Aldape. 2003. A model of molecular interactions on short oligonucleotide microarrays. Nat. Biotechnol. 21:818-821.
-
(2003)
Nat. Biotechnol
, vol.21
, pp. 818-821
-
-
Zhang, L.1
Miles, M.F.2
Aldape, K.D.3
-
14
-
-
1142298544
-
Sensitivity, specificity and the hybridization isotherms of DNA chips
-
Halperin, A., A. Buhot, and E. B. Zhulina. 2004. Sensitivity, specificity and the hybridization isotherms of DNA chips. Biophys. J. 86:718-730.
-
(2004)
Biophys. J
, vol.86
, pp. 718-730
-
-
Halperin, A.1
Buhot, A.2
Zhulina, E.B.3
-
15
-
-
23244444650
-
Brush effects on DNA chips: Thermodynamics, kinetics and design guidelines
-
Halperin, A., A. Buhot, and E. B. Zhulina. 2005. Brush effects on DNA chips: thermodynamics, kinetics and design guidelines. Biophys. J. 89:796-811.
-
(2005)
Biophys. J
, vol.89
, pp. 796-811
-
-
Halperin, A.1
Buhot, A.2
Zhulina, E.B.3
-
16
-
-
33646172937
-
On the hybirdization isotherms of DNA microarrays: The Langmuir model and its extensions
-
Halperin, A., A. Buhot, and E. B. Zhulina. 2006. On the hybirdization isotherms of DNA microarrays: the Langmuir model and its extensions. J. Phys. Condens. Matter. 18:S463-S490.
-
(2006)
J. Phys. Condens. Matter
, vol.18
-
-
Halperin, A.1
Buhot, A.2
Zhulina, E.B.3
-
17
-
-
26444432402
-
Basepair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays
-
Binder, H., S. Preibisch, and T. Kirsten. 2005. Basepair interactions and hybridization isotherms of matched and mismatched oligonucleotide probes on microarrays. Langmuir. 21:9287-9302.
-
(2005)
Langmuir
, vol.21
, pp. 9287-9302
-
-
Binder, H.1
Preibisch, S.2
Kirsten, T.3
-
18
-
-
23244431990
-
Specific and nonspecific hybridization of oligonucleotide probes on microarrays
-
Binder, H., and S. Preibisch. 2005. Specific and nonspecific hybridization of oligonucleotide probes on microarrays. Biophys. J. 89:337-352.
-
(2005)
Biophys. J
, vol.89
, pp. 337-352
-
-
Binder, H.1
Preibisch, S.2
-
19
-
-
33646182577
-
Thermodynamics of competitive surface adsorption on DNA microarrays
-
Binder, H. 2006. Thermodynamics of competitive surface adsorption on DNA microarrays. J. Phys. Condens. Matter. 18:S491-S524.
-
(2006)
J. Phys. Condens. Matter
, vol.18
-
-
Binder, H.1
-
20
-
-
32544449970
-
Thermodynamics of DNA/RNA hybridization in high density oligonucleotide microarrays
-
Carlon, E., and T. Heim. 2006. Thermodynamics of DNA/RNA hybridization in high density oligonucleotide microarrays. Physica A. 362:433-449.
-
(2006)
Physica A
, vol.362
, pp. 433-449
-
-
Carlon, E.1
Heim, T.2
-
22
-
-
13944271437
-
Physicochemical perspectives on DNA microarray and biosensor technologies
-
Levicky, R., and A. Horgan. 2005. Physicochemical perspectives on DNA microarray and biosensor technologies. Trends Biotechnol. 23:143-149.
-
(2005)
Trends Biotechnol
, vol.23
, pp. 143-149
-
-
Levicky, R.1
Horgan, A.2
-
23
-
-
0000143642
-
The thermal denaturation of desoxyribose nucleic acid
-
Rice, S. A., and P. Doty. 1956. The thermal denaturation of desoxyribose nucleic acid. J. Am. Chem. Soc. 79:3937-3947.
-
(1956)
J. Am. Chem. Soc
, vol.79
, pp. 3937-3947
-
-
Rice, S.A.1
Doty, P.2
-
24
-
-
73049166370
-
Thermal renaturation of deoxribonucleic acids
-
Marmur, J., and P. Doty. 1961. Thermal renaturation of deoxribonucleic acids. J. Mol. Biol. 3:585-594.
-
(1961)
J. Mol. Biol
, vol.3
, pp. 585-594
-
-
Marmur, J.1
Doty, P.2
-
25
-
-
0000754002
-
Theory of melting of the helical form in double chains of the DNA type
-
Zimm, B. H. 1960. Theory of melting of the helical form in double chains of the DNA type. J. Chem. Phys. 33:1349-1356.
-
(1960)
J. Chem. Phys
, vol.33
, pp. 1349-1356
-
-
Zimm, B.H.1
-
26
-
-
0013822867
-
Dependence of the melting temperature of DNA on salt concentration
-
Schildkraut, C., and S. Lifson. 1965. Dependence of the melting temperature of DNA on salt concentration. Biopolymers. 3:195-208.
-
(1965)
Biopolymers
, vol.3
, pp. 195-208
-
-
Schildkraut, C.1
Lifson, S.2
-
27
-
-
3042881063
-
The melting transition of low-molecular-weight DNA: Theory and experiment
-
Crothers, D. M., N. R. Kallenbach, and B. H. Zimm. 1965. The melting transition of low-molecular-weight DNA: Theory and experiment. J. Mol. Biol. 11:802-820.
-
(1965)
J. Mol. Biol
, vol.11
, pp. 802-820
-
-
Crothers, D.M.1
Kallenbach, N.R.2
Zimm, B.H.3
-
29
-
-
0014460729
-
Determination of DNA base compositions from melting profiles in dilute buffers
-
Owen, R. J., L. R. Hill, and S. P. Lapage. 1969. Determination of DNA base compositions from melting profiles in dilute buffers. Biopolymers. 7:503-516.
-
(1969)
Biopolymers
, vol.7
, pp. 503-516
-
-
Owen, R.J.1
Hill, L.R.2
Lapage, S.P.3
-
31
-
-
0002459355
-
Thermal denaturation of DNA molecules: A comparison of theory with experiment
-
Wartell, R. M., and A. S. Benight. 1985. Thermal denaturation of DNA molecules: a comparison of theory with experiment. Phys. Rep. 126:67-107.
-
(1985)
Phys. Rep
, vol.126
, pp. 67-107
-
-
Wartell, R.M.1
Benight, A.S.2
-
33
-
-
0032518345
-
Polypyrrole DNA chip on silicon device: Example of hepatitis C virus genotyping
-
Livache, T., B. Fouque, A. Roget, J. Marchand, G. Bidan, R. Théoule, and G. Mathis. 1998. Polypyrrole DNA chip on silicon device: example of hepatitis C virus genotyping. Anal. Biochem. 255:188-194.
-
(1998)
Anal. Biochem
, vol.255
, pp. 188-194
-
-
Livache, T.1
Fouque, B.2
Roget, A.3
Marchand, J.4
Bidan, G.5
Théoule, R.6
Mathis, G.7
-
34
-
-
0034671984
-
Characterization and optimization of a real-time, parallel, label-free, polypyrrole-based DNA sensor by surface plasmon resonance imaging
-
Guedon, P., T. Livache, F. Martin, F. Lesbre, A. Roget, G. Bidan, and Y. Levy. 2000. Characterization and optimization of a real-time, parallel, label-free, polypyrrole-based DNA sensor by surface plasmon resonance imaging. Anal. Chem. 72:6003-6009.
-
(2000)
Anal. Chem
, vol.72
, pp. 6003-6009
-
-
Guedon, P.1
Livache, T.2
Martin, F.3
Lesbre, F.4
Roget, A.5
Bidan, G.6
Levy, Y.7
-
35
-
-
0043125898
-
Polypyrrole based DNA hybridization assays: Study of label free detection processes versus fluorescence on microchips
-
Livache, T., E. Maillart, N. Lassalle, P. Mailley, B. Corso, P. Guedon, A. Roget, and Y. Lévy. 2003. Polypyrrole based DNA hybridization assays: study of label free detection processes versus fluorescence on microchips. J. Pharm. Biomed. Anal. 32:687-696.
-
(2003)
J. Pharm. Biomed. Anal
, vol.32
, pp. 687-696
-
-
Livache, T.1
Maillart, E.2
Lassalle, N.3
Mailley, P.4
Corso, B.5
Guedon, P.6
Roget, A.7
Lévy, Y.8
-
36
-
-
0242498780
-
Surface plasmon resonance imaging as a tool to monitor biomolecular interactions in an array based format
-
Smith, E. A., and R. M. Corn. 2003. Surface plasmon resonance imaging as a tool to monitor biomolecular interactions in an array based format. Appl. Spectrosc. 57:320A-332A.
-
(2003)
Appl. Spectrosc
, vol.57
-
-
Smith, E.A.1
Corn, R.M.2
-
37
-
-
85035214096
-
Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays
-
Naef, F., and M. Magnasco. 2003. Solving the riddle of the bright mismatches: labeling and effective binding in oligonucleotide arrays. Phys. Rev. E. 68:011906.
-
(2003)
Phys. Rev. E
, vol.68
, pp. 011906
-
-
Naef, F.1
Magnasco, M.2
-
38
-
-
0348195767
-
Thermodynamics of duplex formation and mismatch discrimination on photolithographically synthesized oligonucleotide arrays
-
Forman, J. E., I. D. Walton, D. Stern, R. P. Rava, and M. O. Trulson. 1998. Thermodynamics of duplex formation and mismatch discrimination on photolithographically synthesized oligonucleotide arrays. ACS Symp. Ser. 682:206-228.
-
(1998)
ACS Symp. Ser
, vol.682
, pp. 206-228
-
-
Forman, J.E.1
Walton, I.D.2
Stern, D.3
Rava, R.P.4
Trulson, M.O.5
-
39
-
-
0031106607
-
Analysis of oligonucleotide probe affinities using surface plasmon resonance: A means for mutational scanning
-
Persson, B., K. Stenhag, P. Nilsson, A. Larsson, M. Uhlén, and P.-A. Nygren. 1997. Analysis of oligonucleotide probe affinities using surface plasmon resonance: a means for mutational scanning. Anal. Biochem. 246:34-44.
-
(1997)
Anal. Biochem
, vol.246
, pp. 34-44
-
-
Persson, B.1
Stenhag, K.2
Nilsson, P.3
Larsson, A.4
Uhlén, M.5
Nygren, P.-A.6
-
40
-
-
1542606746
-
Kinetic measurements of DNA hybridization on an oligonucleotide- immobilized 27-MHz quartz crystal microbalance
-
Okahata, Y., M. Kawase, K. Niikura, F. Ohtake, H. Furusawa, and Y. Ebara. 1998. Kinetic measurements of DNA hybridization on an oligonucleotide- immobilized 27-MHz quartz crystal microbalance. Anal. Chem. 70:1288-1296.
-
(1998)
Anal. Chem
, vol.70
, pp. 1288-1296
-
-
Okahata, Y.1
Kawase, M.2
Niikura, K.3
Ohtake, F.4
Furusawa, H.5
Ebara, Y.6
-
41
-
-
0032533559
-
Electrochemical quantitation of DNA immobilized on gold
-
Steel, A. B., T. M. Herne, and M. J. Tarlov. 1998. Electrochemical quantitation of DNA immobilized on gold. Anal. Chem. 70:4670-4677.
-
(1998)
Anal. Chem
, vol.70
, pp. 4670-4677
-
-
Steel, A.B.1
Herne, T.M.2
Tarlov, M.J.3
-
42
-
-
0034607310
-
Quantitative measurements and modeling of kinetics in nucleic acid monolayer films using SPR spectroscopy
-
Georgiadis, R., K. P. Peterlinz, and A. W. Peterson. 2000. Quantitative measurements and modeling of kinetics in nucleic acid monolayer films using SPR spectroscopy. J. Am. Chem. Soc. 122:3166-3173.
-
(2000)
J. Am. Chem. Soc
, vol.122
, pp. 3166-3173
-
-
Georgiadis, R.1
Peterlinz, K.P.2
Peterson, A.W.3
-
43
-
-
0035163623
-
Surface plasmon resonance imaging measurements of DNA and RNA hybridization adsorption onto DNA microarrays
-
Nelson, B. P., T. E. Grimsrud, M. R. Liles, R. M. Goodman, and R. M. Corn. 2001. Surface plasmon resonance imaging measurements of DNA and RNA hybridization adsorption onto DNA microarrays. Anal. Chem. 73:1-7.
-
(2001)
Anal. Chem
, vol.73
, pp. 1-7
-
-
Nelson, B.P.1
Grimsrud, T.E.2
Liles, M.R.3
Goodman, R.M.4
Corn, R.M.5
-
44
-
-
0037102247
-
Use of hybridization kinetics for differentiating specific from non-specific binding to oligonucleotide microarrays
-
Dai, H., M. Meyer, S. Stepaniants, M. Ziman, and R. Soughton. 2002. Use of hybridization kinetics for differentiating specific from non-specific binding to oligonucleotide microarrays. Nucleic Acids Res. 30:e86.
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Dai, H.1
Meyer, M.2
Stepaniants, S.3
Ziman, M.4
Soughton, R.5
-
45
-
-
0037188875
-
Normalization and analysis of DNA microarray data by self consistency and local regression
-
Kepler, T. B., L. Crosby, and K. T. Morgan. 2002. Normalization and analysis of DNA microarray data by self consistency and local regression. Genome Biol. 3:0037.1-0037.12.
-
(2002)
Genome Biol
, vol.3
-
-
Kepler, T.B.1
Crosby, L.2
Morgan, K.T.3
-
46
-
-
0037065343
-
Hybridization of mismatched or partially matched DNA at surfaces
-
Peterson, A. W., L. K. Wolf, and R. M. Georgiadis. 2002. Hybridization of mismatched or partially matched DNA at surfaces. J. Am. Chem. Soc. 124:14601-14607.
-
(2002)
J. Am. Chem. Soc
, vol.124
, pp. 14601-14607
-
-
Peterson, A.W.1
Wolf, L.K.2
Georgiadis, R.M.3
-
47
-
-
0037388263
-
Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays
-
Hekstra, D., A. R. Taussig, M. Magnasco, and F. Naef. 2003. Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays. Nucleic Acids Res. 31:1962-1968.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 1962-1968
-
-
Hekstra, D.1
Taussig, A.R.2
Magnasco, M.3
Naef, F.4
-
48
-
-
2442590687
-
Mismatching base-pair dependence of the kinetics of DNA-DNA hybridization studied by surface plasmon fluorescence spectroscopy
-
Tawa, K., and W. Knoll. 2004. Mismatching base-pair dependence of the kinetics of DNA-DNA hybridization studied by surface plasmon fluorescence spectroscopy. Nucleic Acids Res. 32:2372-2377.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2372-2377
-
-
Tawa, K.1
Knoll, W.2
-
49
-
-
2442658071
-
Oligonucleotide hybridization studied by a surface plasmon diffraction sensor (SPDS)
-
Yu, F., D. Yao, and W. Knoll. 2004. Oligonucleotide hybridization studied by a surface plasmon diffraction sensor (SPDS). Nucleic Acids Res. 32:e75.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Yu, F.1
Yao, D.2
Knoll, W.3
-
50
-
-
21644433431
-
Long-range surface plasmon resonance imaging for bioaffinity sensors
-
Wark, A. W., H. J. Lee, and R. M. Corn. 2005. Long-range surface plasmon resonance imaging for bioaffinity sensors. Anal. Chem. 77:3904-3907.
-
(2005)
Anal. Chem
, vol.77
, pp. 3904-3907
-
-
Wark, A.W.1
Lee, H.J.2
Corn, R.M.3
-
51
-
-
22144466500
-
Surface density dependence of PCR amplicon hybridization on PN1/DNA probe layers
-
Yao, D., J. Kim, F. Yu, P. E. Nielsen, E.-K. Sinner, and W. Knoll. 2005. Surface density dependence of PCR amplicon hybridization on PN1/DNA probe layers. Biophys. J. 88:2745-2751.
-
(2005)
Biophys. J
, vol.88
, pp. 2745-2751
-
-
Yao, D.1
Kim, J.2
Yu, F.3
Nielsen, P.E.4
Sinner, E.-K.5
Knoll, W.6
-
52
-
-
15744389679
-
Alteration of selectivity of hybridization of immobilized oligonucleotide probes by co-immobilization with charged oligomers of ethylene glycol
-
Piunno, P. A. E., J. H. Watterson, C. C. Kotoris, and U. J. Krull. 2005. Alteration of selectivity of hybridization of immobilized oligonucleotide probes by co-immobilization with charged oligomers of ethylene glycol. Anal. Chim. Acta. 534:53-61.
-
(2005)
Anal. Chim. Acta
, vol.534
, pp. 53-61
-
-
Piunno, P.A.E.1
Watterson, J.H.2
Kotoris, C.C.3
Krull, U.J.4
-
53
-
-
0028983492
-
Real-time detection of DNA hybridization and melting on oligonucleotide arrays by using optical wave guides
-
Stimpson, D. I., J. V. Hoijer, W. Hsieh, C. Jou, J. Gordon, T. Theriault, R. Gamble, and J. D. Baldeschwieler. 1995. Real-time detection of DNA hybridization and melting on oligonucleotide arrays by using optical wave guides. Proc. Natl. Acad. Sci. USA. 92:6379-6383.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 6379-6383
-
-
Stimpson, D.I.1
Hoijer, J.V.2
Hsieh, W.3
Jou, C.4
Gordon, J.5
Theriault, T.6
Gamble, R.7
Baldeschwieler, J.D.8
-
54
-
-
16544393331
-
Innovative instrumentation for microarray scanning and analysis: Application for characterization of oligonucleotide duplexes behavior
-
Khomyakova, E. B., E. V. Dreval, M. Tran-Dang, M.-C. Potier, and F. P. Soussaline. 2004. Innovative instrumentation for microarray scanning and analysis: application for characterization of oligonucleotide duplexes behavior. Cell. Mol. Biol. 50:217-224.
-
(2004)
Cell. Mol. Biol
, vol.50
, pp. 217-224
-
-
Khomyakova, E.B.1
Dreval, E.V.2
Tran-Dang, M.3
Potier, M.-C.4
Soussaline, F.P.5
-
55
-
-
0036787662
-
Reusable platforms for high-throughput on-chip temperature gradient assays
-
Mao, H., M. A. Holden, M. You, and P. S. Cremer. 2002. Reusable platforms for high-throughput on-chip temperature gradient assays. Anal. Chem. 74:5071-5075.
-
(2002)
Anal. Chem
, vol.74
, pp. 5071-5075
-
-
Mao, H.1
Holden, M.A.2
You, M.3
Cremer, P.S.4
-
56
-
-
0038666509
-
Single nucleotide polymorphism genotyping using allele-specific PCR and fluorescence melting curves
-
Papp, A. C., J. K. Pinsonneault, G. Cooke, and W. Sadée. 2003. Single nucleotide polymorphism genotyping using allele-specific PCR and fluorescence melting curves. Biotechniques. 34:1068-1072.
-
(2003)
Biotechniques
, vol.34
, pp. 1068-1072
-
-
Papp, A.C.1
Pinsonneault, J.K.2
Cooke, G.3
Sadée, W.4
-
57
-
-
0031568919
-
Product differentiation by analysis of DNA melting curves during the polymerase chain reaction
-
Ririe, K. M., R. P. Rasmussen, and C. T. Wittwer. 1997. Product differentiation by analysis of DNA melting curves during the polymerase chain reaction. Anal. Biochem. 245:154-160.
-
(1997)
Anal. Biochem
, vol.245
, pp. 154-160
-
-
Ririe, K.M.1
Rasmussen, R.P.2
Wittwer, C.T.3
-
58
-
-
4644245816
-
Sensitivity and specificity of single-nucleotide polymorphism scanning by high-resolution melting analysis
-
Reed, G. H., and C. T. Wittwer. 2004. Sensitivity and specificity of single-nucleotide polymorphism scanning by high-resolution melting analysis. Clin. Chem. 50:1748-1754.
-
(2004)
Clin. Chem
, vol.50
, pp. 1748-1754
-
-
Reed, G.H.1
Wittwer, C.T.2
-
59
-
-
7444244358
-
An investigation into the influence of secondary structures on DNA hybridization using surface plasmon resonance biosensing
-
Chien, F.-C., J.-S. Liu, H.-J. Su, L.-A. Kao, C.-F. Chiou, W.-Y. Chen, and S.-J. Chen. 2004. An investigation into the influence of secondary structures on DNA hybridization using surface plasmon resonance biosensing. Chem. Phys. Lett. 397:429-434.
-
(2004)
Chem. Phys. Lett
, vol.397
, pp. 429-434
-
-
Chien, F.-C.1
Liu, J.-S.2
Su, H.-J.3
Kao, L.-A.4
Chiou, C.-F.5
Chen, W.-Y.6
Chen, S.-J.7
-
60
-
-
28044465726
-
Effects of DNA secondary structure on oligonucleotide probe binding efficiency
-
Koehler, R. T., and N. Peyret. 2005. Effects of DNA secondary structure on oligonucleotide probe binding efficiency. Comput. Biol. Chem. 29:393-397.
-
(2005)
Comput. Biol. Chem
, vol.29
, pp. 393-397
-
-
Koehler, R.T.1
Peyret, N.2
-
61
-
-
0030478020
-
Kinetic analysis of biosensor data: Elementary tests for self-consistency
-
Schuck, P., and A. P. Minton. 1996. Kinetic analysis of biosensor data: elementary tests for self-consistency. Trends Biochem. Sci. 21:458-460.
-
(1996)
Trends Biochem. Sci
, vol.21
, pp. 458-460
-
-
Schuck, P.1
Minton, A.P.2
-
62
-
-
0030795295
-
Reliable determination of binding affinity and kinetics using surface plasmon resonance biosensors
-
Schuck, P. 1997. Reliable determination of binding affinity and kinetics using surface plasmon resonance biosensors. Curr. Opin. Biotechnol. 8:498-502.
-
(1997)
Curr. Opin. Biotechnol
, vol.8
, pp. 498-502
-
-
Schuck, P.1
-
63
-
-
0003803285
-
-
University Science Books, Sausalito, CA
-
V. A. Bloomfield, D. M. Crothers, I. Tinoco, J. E. Hearst, D. E. Wemmer, P. A. Killman, and D. H. Turner. 2000. Nucleic Acids: Structures, Properties and Functions. University Science Books, Sausalito, CA.
-
(2000)
Nucleic Acids: Structures, Properties and Functions
-
-
Bloomfield, V.A.1
Crothers, D.M.2
Tinoco, I.3
Hearst, J.E.4
Wemmer, D.E.5
Killman, P.A.6
Turner, D.H.7
-
64
-
-
0032539693
-
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
-
SantaLucia, J. 1998. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl. Acad. Sci. USA. 95:1460-1465.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 1460-1465
-
-
SantaLucia, J.1
-
65
-
-
0033596964
-
-
Peyret, N., P. A. Seneviratne, H. T. Allawi, and J. SantaLucia. 1999. Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches. Biochemistry. 38:3468-3477.
-
Peyret, N., P. A. Seneviratne, H. T. Allawi, and J. SantaLucia. 1999. Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches. Biochemistry. 38:3468-3477.
-
-
-
-
66
-
-
0025875214
-
The contribution of DNA single-stranded order to the thermodynamics of duplex formation
-
Vesnaver, G., and K. J. Breslauer. 1991. The contribution of DNA single-stranded order to the thermodynamics of duplex formation. Proc. Natl. Acad. Sci. USA. 88:3569-3573.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 3569-3573
-
-
Vesnaver, G.1
Breslauer, K.J.2
-
67
-
-
0033614819
-
Enthalpy and heat capacity changes for formation of an oligomeric DNA duplex: Interpretation in terms of coupled processes of formation and association of single-stranded helices
-
Holbrook, J. A., M. W. Capp, R. M. Saecker, and M. T. Record. 1999. Enthalpy and heat capacity changes for formation of an oligomeric DNA duplex: interpretation in terms of coupled processes of formation and association of single-stranded helices. Biochemistry. 38:8409-8422.
-
(1999)
Biochemistry
, vol.38
, pp. 8409-8422
-
-
Holbrook, J.A.1
Capp, M.W.2
Saecker, R.M.3
Record, M.T.4
-
68
-
-
0033529318
-
A more unified picture for the thermodynamics of nucleic acid duplex melting: A characterization by calorimetric and volumetric techniques
-
Chalikian, T. V., J. Völker, G. E. Plum, and K. J. Breslauer. 1999. A more unified picture for the thermodynamics of nucleic acid duplex melting: a characterization by calorimetric and volumetric techniques. Proc. Natl. Acad. Sci. USA. 96:7853-7858.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 7853-7858
-
-
Chalikian, T.V.1
Völker, J.2
Plum, G.E.3
Breslauer, K.J.4
-
69
-
-
0032763957
-
Heat capacity effects on the melting of DNA. 1. General aspects
-
Rouzina, I., and V. A. Bloomfield. 1999. Heat capacity effects on the melting of DNA. 1. General aspects. Biophys. J. 77:3242-3251.
-
(1999)
Biophys. J
, vol.77
, pp. 3242-3251
-
-
Rouzina, I.1
Bloomfield, V.A.2
-
70
-
-
0036318088
-
Temperature dependence of thermodynamic properties for DNA/DNA and RNA/DNA duplex formation
-
Wu, P., S.-I. Nakano, and N. Sugimoto. 2002. Temperature dependence of thermodynamic properties for DNA/DNA and RNA/DNA duplex formation. Eur. J. Biochem. 269:2821-2830.
-
(2002)
Eur. J. Biochem
, vol.269
, pp. 2821-2830
-
-
Wu, P.1
Nakano, S.-I.2
Sugimoto, N.3
-
71
-
-
30744444833
-
Heat capacity changes associated with nucleic acid folding
-
Mikulecky, P. J., and A. L. Feig. 2006. Heat capacity changes associated with nucleic acid folding. Biopolymers. 82:38-58.
-
(2006)
Biopolymers
, vol.82
, pp. 38-58
-
-
Mikulecky, P.J.1
Feig, A.L.2
-
72
-
-
0030971891
-
Possible origin of differences between van't Hoff and calorimetric enthalpy estimates
-
Chaires, J. B. 1997. Possible origin of differences between van't Hoff and calorimetric enthalpy estimates. Biophys. Chem. 64:15-23.
-
(1997)
Biophys. Chem
, vol.64
, pp. 15-23
-
-
Chaires, J.B.1
-
73
-
-
0038778441
-
Combined affinity and rate constant distributions of ligand populations from experimental surface binding kinetics and equilibria
-
Svitel, J., A. Balbo, R. A. Mariuzza, N. R. Gonzales, and P. Schuck. 2003. Combined affinity and rate constant distributions of ligand populations from experimental surface binding kinetics and equilibria. Biophys. J. 84:4062-4077.
-
(2003)
Biophys. J
, vol.84
, pp. 4062-4077
-
-
Svitel, J.1
Balbo, A.2
Mariuzza, R.A.3
Gonzales, N.R.4
Schuck, P.5
|