메뉴 건너뛰기




Volumn 292, Issue 2, 1999, Pages 251-262

Universal DNA microarray method for multiplex detection of low abundance point mutations

Author keywords

DNA hybridization; Ligase detection reaction; Single nucleotide polymorphism (SNP); Thermostable DNA ligase; Zip code addressing

Indexed keywords

DNA;

EID: 0033578928     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1999.3063     Document Type: Article
Times cited : (297)

References (50)
  • 1
    • 0026056970 scopus 로고
    • Genetic disease detection and DNA amplification using cloned thermostable ligase
    • Barany F. Genetic disease detection and DNA amplification using cloned thermostable ligase. Proc. Natl Acad. Sci. USA. 88:1991a;189-193.
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 189-193
    • Barany, F.1
  • 2
    • 14744272204 scopus 로고
    • The ligase chain reaction (LCR) in a PCR world
    • Barany F. The ligase chain reaction (LCR) in a PCR world. PCR Methods Appl. 1:1991b;5-16.
    • (1991) PCR Methods Appl. , vol.1 , pp. 5-16
    • Barany, F.1
  • 4
    • 0002264924 scopus 로고    scopus 로고
    • A multiplex PCR-ligase detection reaction assay for human identity testing
    • Belgrader P., Marino M., Lubin M., Barany F. A multiplex PCR-ligase detection reaction assay for human identity testing. Genome Sci. Technol. 1:1996;77-87.
    • (1996) Genome Sci. Technol. , vol.1 , pp. 77-87
    • Belgrader, P.1    Marino, M.2    Lubin, M.3    Barany, F.4
  • 5
    • 0026010995 scopus 로고
    • Molecular themes in oncogenesis
    • Bishop J. M. Molecular themes in oncogenesis. Cell. 64:1991;235-248.
    • (1991) Cell , vol.64 , pp. 235-248
    • Bishop, J.M.1
  • 6
    • 84984932472 scopus 로고    scopus 로고
    • Exploring the new world of the genome with DNA microarrays
    • Brown P. O., Botstein D. Exploring the new world of the genome with DNA microarrays. Nature Genet. 21:1999;33-37.
    • (1999) Nature Genet. , vol.21 , pp. 33-37
    • Brown, P.O.1    Botstein, D.2
  • 7
    • 0028342395 scopus 로고
    • Detection of K- ras mutations in the stool of patients with pancreatic adenocarcinoma and pancreatic ductal hyperplasia
    • Caldas C., Hahn S. A., Hruban R. H., Redston M. S., Yeo C. J., Kern S. E. Detection of K- ras mutations in the stool of patients with pancreatic adenocarcinoma and pancreatic ductal hyperplasia. Cancer Res. 54:1994;3568-3573.
    • (1994) Cancer Res. , vol.54 , pp. 3568-3573
    • Caldas, C.1    Hahn, S.A.2    Hruban, R.H.3    Redston, M.S.4    Yeo, C.J.5    Kern, S.E.6
  • 9
    • 0029915406 scopus 로고    scopus 로고
    • Cystic fibrosis mutation detection by hybridization to light-generated DNA probe arrays
    • Cronin M. T., Fucini R. V., Kim S. M., Masino R. S., Wespi R. M., Miyada C. G. Cystic fibrosis mutation detection by hybridization to light-generated DNA probe arrays. Human Mutat. 7:1996;244-255.
    • (1996) Human Mutat. , vol.7 , pp. 244-255
    • Cronin, M.T.1    Fucini, R.V.2    Kim, S.M.3    Masino, R.S.4    Wespi, R.M.5    Miyada, C.G.6
  • 11
    • 0029095112 scopus 로고
    • Detection of steroid 21 hydroxylase alleles using gene-specific PCR and a multiplexed ligation detection reaction
    • Day D. J., Speiser P. W., White P. C., Barany F. Detection of steroid 21 hydroxylase alleles using gene-specific PCR and a multiplexed ligation detection reaction. Genomics. 29:1995;152-162.
    • (1995) Genomics , vol.29 , pp. 152-162
    • Day, D.J.1    Speiser, P.W.2    White, P.C.3    Barany, F.4
  • 12
    • 0029806142 scopus 로고    scopus 로고
    • Identification of non-amplifying CYP21 genes when using PCR-based diagnosis of 21-hydroxylase deficiency in congenital adrenal hyperplasia (CAH) affected pedigrees
    • Day D. J., Speiser P. W., Schulze E., Bettendorf M., Fitness J., Barany F., White P. C. Identification of non-amplifying CYP21 genes when using PCR-based diagnosis of 21-hydroxylase deficiency in congenital adrenal hyperplasia (CAH) affected pedigrees. Hum. Mol. Genet. 5:1996;2039-2048.
    • (1996) Hum. Mol. Genet. , vol.5 , pp. 2039-2048
    • Day, D.J.1    Speiser, P.W.2    Schulze, E.3    Bettendorf, M.4    Fitness, J.5    Barany, F.6    White, P.C.7
  • 14
    • 0030890466 scopus 로고    scopus 로고
    • Sequence analysis by hybridization with oligonucleotide microchip: Identification of β-thalassemia mutations
    • Drobyshev A., Mologina N., Shik V., Pobedimskaya D., Yershov G., Mirzabekov A. Sequence analysis by hybridization with oligonucleotide microchip: identification of β-thalassemia mutations. Gene. 188:1997;45-52.
    • (1997) Gene , vol.188 , pp. 45-52
    • Drobyshev, A.1    Mologina, N.2    Shik, V.3    Pobedimskaya, D.4    Yershov, G.5    Mirzabekov, A.6
  • 16
    • 0030662273 scopus 로고    scopus 로고
    • Human cancer syndromes: Clues to the origin and nature of cancer
    • Fearon E. R. Human cancer syndromes: clues to the origin and nature of cancer. Science. 278:1997;1043-1050.
    • (1997) Science , vol.278 , pp. 1043-1050
    • Fearon, E.R.1
  • 17
    • 0025312728 scopus 로고
    • A genetic model for colorectal tumorigenesis
    • Fearon E. R., Vogelstein B. A genetic model for colorectal tumorigenesis. Cell. 61:1990;759-767.
    • (1990) Cell , vol.61 , pp. 759-767
    • Fearon, E.R.1    Vogelstein, B.2
  • 18
    • 0033559887 scopus 로고    scopus 로고
    • A novel method for determining linkage between DNA sequences: Hybridization to paired probe arrays
    • Gentalen E., Chee M. A novel method for determining linkage between DNA sequences: hybridization to paired probe arrays. Nucl. Acids Res. 27:1999;1485-1491.
    • (1999) Nucl. Acids Res. , vol.27 , pp. 1485-1491
    • Gentalen, E.1    Chee, M.2
  • 20
    • 0028618275 scopus 로고
    • Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports
    • Guo Z., Guilfoyle R. A., Thiel A. J., Wang R., Smith L. M. Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports. Nucl. Acids Res. 22:1994;5456-5465.
    • (1994) Nucl. Acids Res. , vol.22 , pp. 5456-5465
    • Guo, Z.1    Guilfoyle, R.A.2    Thiel, A.J.3    Wang, R.4    Smith, L.M.5
  • 21
    • 0030939593 scopus 로고    scopus 로고
    • Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization
    • Guo Z., Liu Q., Smith L. M. Enhanced discrimination of single nucleotide polymorphisms by artificial mismatch hybridization. Nature Biotechnol. 15:1997;331-335.
    • (1997) Nature Biotechnol. , vol.15 , pp. 331-335
    • Guo, Z.1    Liu, Q.2    Smith, L.M.3
  • 22
    • 84984934752 scopus 로고    scopus 로고
    • Resequencing and mutational analysis using oligonucleotide microarrays
    • Hacia J. G. Resequencing and mutational analysis using oligonucleotide microarrays. Nature Genet. 21:1999;42-47.
    • (1999) Nature Genet. , vol.21 , pp. 42-47
    • Hacia, J.G.1
  • 23
    • 0029829670 scopus 로고    scopus 로고
    • Detection of heterozygous mutations in BRCA1 using high density oligonucleotide arrays and two-colour fluorescence analysis
    • Hacia J. G., Brody L. C., Chee M. S., Fodor S. P., Collins F. S. Detection of heterozygous mutations in BRCA1 using high density oligonucleotide arrays and two-colour fluorescence analysis. Nature Genet. 14:1996;441-447.
    • (1996) Nature Genet. , vol.14 , pp. 441-447
    • Hacia, J.G.1    Brody, L.C.2    Chee, M.S.3    Fodor, S.P.4    Collins, F.S.5
  • 26
    • 0028965641 scopus 로고
    • K- ras gene mutations in early colorectal cancer . . . flat elevated vs polyp-forming cancer
    • Hasegawa H., Ueda M., Watanabe M., Teramoto T., Mukai M., Kitajima M. K- ras gene mutations in early colorectal cancer . . . flat elevated vs polyp-forming cancer. Oncogene. 10:1995;1413-1416.
    • (1995) Oncogene , vol.10 , pp. 1413-1416
    • Hasegawa, H.1    Ueda, M.2    Watanabe, M.3    Teramoto, T.4    Mukai, M.5    Kitajima, M.6
  • 27
    • 0029117137 scopus 로고
    • Simultaneous identification of bacterial virulence genes by negative selection
    • Hensel M., Shea J. E., Gleeson C., Jones M. D., Dalton E., Holden D. W. Simultaneous identification of bacterial virulence genes by negative selection. Science. 269:1995;400-403.
    • (1995) Science , vol.269 , pp. 400-403
    • Hensel, M.1    Shea, J.E.2    Gleeson, C.3    Jones, M.D.4    Dalton, E.5    Holden, D.W.6
  • 28
  • 31
  • 33
    • 0029984253 scopus 로고    scopus 로고
    • Detection of K- ras mutations in stools of patients with colorectal cancer by mutant-enriched PCR
    • Nollau P., Moser C., Weinland G., Wagener C. Detection of K- ras mutations in stools of patients with colorectal cancer by mutant-enriched PCR. Int. J. Cancer. 66:1996;332-336.
    • (1996) Int. J. Cancer , vol.66 , pp. 332-336
    • Nollau, P.1    Moser, C.2    Weinland, G.3    Wagener, C.4
  • 35
    • 0030810721 scopus 로고    scopus 로고
    • Minisequencing: A specific tool for DNA analysis and diagnostics on oligonucleotide arrays
    • Pastinen T., Kurg A., Metspalu A., Peltonen L., Syvanen A. C. Minisequencing: a specific tool for DNA analysis and diagnostics on oligonucleotide arrays. Genome Res. 7:1997;606-614.
    • (1997) Genome Res. , vol.7 , pp. 606-614
    • Pastinen, T.1    Kurg, A.2    Metspalu, A.3    Peltonen, L.4    Syvanen, A.C.5
  • 37
    • 0030686551 scopus 로고    scopus 로고
    • Environment and cancer: Who are susceptible?
    • Perera F. P. Environment and cancer: who are susceptible? Science. 278:1997;1068-1073.
    • (1997) Science , vol.278 , pp. 1068-1073
    • Perera, F.P.1
  • 38
    • 0033041685 scopus 로고    scopus 로고
    • High-throughput polymorphism screening and genotyping with high-density oligonucleotide arrays
    • Sapolsky R. J., Hsie L., Berno A., Ghandour G., Mittman M., Fan J.-B. High-throughput polymorphism screening and genotyping with high-density oligonucleotide arrays. Genet. Anal. 14:1999;187-192.
    • (1999) Genet. Anal. , vol.14 , pp. 187-192
    • Sapolsky, R.J.1    Hsie, L.2    Berno, A.3    Ghandour, G.4    Mittman, M.5    Fan, J.-B.6
  • 40
    • 0029812283 scopus 로고    scopus 로고
    • A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization
    • Shalon D., Smith S. J., Brown P. O. A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization. Genome Res. 6:1996;639-645.
    • (1996) Genome Res. , vol.6 , pp. 639-645
    • Shalon, D.1    Smith, S.J.2    Brown, P.O.3
  • 41
    • 0029804246 scopus 로고    scopus 로고
    • Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy
    • Shoemaker D. D., Lashkari D. A., Morris D., Mittmann M., Davis R. W. Quantitative phenotypic analysis of yeast deletion mutants using a highly parallel molecular bar-coding strategy. Nature Genet. 14:1996;450-456.
    • (1996) Nature Genet. , vol.14 , pp. 450-456
    • Shoemaker, D.D.1    Lashkari, D.A.2    Morris, D.3    Mittmann, M.4    Davis, R.W.5
  • 42
    • 0029877956 scopus 로고    scopus 로고
    • Mutation detection by solid phase primer extension
    • Shumaker J. M., Metspalu A., Caskey C. T. Mutation detection by solid phase primer extension. Hum. Mutat. 7:1996;346-354.
    • (1996) Hum. Mutat. , vol.7 , pp. 346-354
    • Shumaker, J.M.1    Metspalu, A.2    Caskey, C.T.3
  • 43
    • 0026537986 scopus 로고
    • Identification of ras oncogene mutations in the stool of patients with curable colorectal tumors
    • Sidransky D., Tokino T., Hamilton S. R., Kinzler K. W., Levin B., Frost P., Vogelstein B. Identification of ras oncogene mutations in the stool of patients with curable colorectal tumors. Science. 256:1992;102-105.
    • (1992) Science , vol.256 , pp. 102-105
    • Sidransky, D.1    Tokino, T.2    Hamilton, S.R.3    Kinzler, K.W.4    Levin, B.5    Frost, P.6    Vogelstein, B.7
  • 44
    • 0029962816 scopus 로고    scopus 로고
    • DNA chips: Analysing sequence by hybridization to oligonucleotides on a large scale
    • Southern E. M. DNA chips: analysing sequence by hybridization to oligonucleotides on a large scale. Trends Genet. 12:1996;110-115.
    • (1996) Trends Genet. , vol.12 , pp. 110-115
    • Southern, E.M.1
  • 46
    • 0029935970 scopus 로고    scopus 로고
    • Mechanisms of spontaneous human cancers
    • Venitt S. Mechanisms of spontaneous human cancers. Environ. Health Perspect. 3:1996;633-637.
    • (1996) Environ. Health Perspect. , vol.3 , pp. 633-637
    • Venitt, S.1
  • 48
    • 0013591460 scopus 로고
    • Practical approaches to molecular screening of colon cancer
    • S. Srivastava, S. M. Lippman, W. K. Hong, & J. L. Mulshine. Armonk: Futura Publishing Company, Inc.
    • Wu S., Hoshino B., Zhou D. F. H., Liu A., Aziz D. C., Barathur R. R. Practical approaches to molecular screening of colon cancer. Srivastava S., Lippman S. M., Hong W. K., Mulshine J. L. Early Detection of Cancer Molecular Markers. 1994;237-254 Futura Publishing Company, Inc. Armonk.
    • (1994) Early Detection of Cancer Molecular Markers , pp. 237-254
    • Wu, S.1    Hoshino, B.2    Zhou, D.F.H.3    Liu, A.4    Aziz, D.C.5    Barathur, R.R.6
  • 50
    • 0032564342 scopus 로고    scopus 로고
    • Cellular gene expression altered by human cytomegalovirus: Global monitoring with oligonucleotide arrays
    • Zhu H., Cong J.-P., Mamora G., Gingeras T., Shenk T. Cellular gene expression altered by human cytomegalovirus: global monitoring with oligonucleotide arrays. Proc. Natl Acad. Sci. USA. 95:1998;14470-14475.
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 14470-14475
    • Zhu, H.1    Cong, J.-P.2    Mamora, G.3    Gingeras, T.4    Shenk, T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.