-
2
-
-
0344010195
-
Developmental Genetics of the Female Reproductive Tract in Mammals
-
Kobayashi A Behringer, R. R.: Developmental Genetics of the Female Reproductive Tract in Mammals. Nature Reviews Genetics 2003:1225-1237.
-
(2003)
Nature Reviews Genetics
, pp. 1225-1237
-
-
Kobayashi, A.1
Behringer, R.R.2
-
3
-
-
1842485064
-
Evidence for a Hox14 paralog group in vertebrates
-
Powers TP Amemiya, C.T.: Evidence for a Hox14 paralog group in vertebrates. Current Biology 2004, 14:R183-R184.
-
(2004)
Current Biology
, vol.14
-
-
Powers, T.P.1
Amemiya, C.T.2
-
4
-
-
0024209901
-
Mammalian homeobox-containing genes: Genome organization, structure, expression and evolution
-
Schughart K KC Ruddle FH.: Mammalian homeobox-containing genes: genome organization, structure, expression and evolution. British Journal of Cancer 1988, 9:9-13.
-
(1988)
British Journal of Cancer
, vol.9
, pp. 9-13
-
-
Schughart, K.K.C.1
Ruddle, F.H.2
-
6
-
-
0032573579
-
Zebrafish hox Clusters and Vertebrate Genome Evolution
-
Amores A, Force A, Yan YL, Joly L, Amemiya C, Fritz A, Ho RK, Langeland J, Prince V, Wang YL, Westerfield M, Ekker M, Postlethwait JH: Zebrafish hox Clusters and Vertebrate Genome Evolution. Science 1998, 282:1711-1714.
-
(1998)
Science
, vol.282
, pp. 1711-1714
-
-
Amores, A.1
Force, A.2
Yan, Y.L.3
Joly, L.4
Amemiya, C.5
Fritz, A.6
Ho, R.K.7
Langeland, J.8
Prince, V.9
Wang, Y.L.10
Westerfield, M.11
Ekker, M.12
Postlethwait, J.H.13
-
7
-
-
0347135956
-
Developmental Roles of Pufferfish Hox Clusters and Genome Evolution in Ray-Fin Fish
-
Amores A, Suzuki T, Yan YL, Pomeroy J, Singer A, Amemiya C, Postlethwait JH: Developmental Roles of Pufferfish Hox Clusters and Genome Evolution in Ray-Fin Fish. Genome Res 2004, 14:1-10.
-
(2004)
Genome Res
, vol.14
, pp. 1-10
-
-
Amores, A.1
Suzuki, T.2
Yan, Y.L.3
Pomeroy, J.4
Singer, A.5
Amemiya, C.6
Postlethwait, J.H.7
-
8
-
-
1842838629
-
Evidence for independent Hox gene duplications in the hagfish lineage: A PCR-based gene inventory of Eptatretus stoutii
-
Stadler PF Fried, C., Prohaska, S.J., Bailey, W.J., Misof, B.Y., Ruddle, F.H., Wagner, G.P.: Evidence for independent Hox gene duplications in the hagfish lineage: a PCR-based gene inventory of Eptatretus stoutii. Molecular Phylogenetics and Evolution 2004, 32:686-694.
-
(2004)
Molecular Phylogenetics and Evolution
, vol.32
, pp. 686-694
-
-
Stadler, P.F.1
Fried, C.2
Prohaska, S.J.3
Bailey, W.J.4
Misof, B.Y.5
Ruddle, F.H.6
Wagner, G.P.7
-
11
-
-
0032893932
-
Preservation of Duplicate Genes by Complementary, Degenerative Mutations
-
Force A, Lynch M, Pickett FB, Amores A, Yan Y, Postlethwait J: Preservation of Duplicate Genes by Complementary, Degenerative Mutations. Genetics 1999, 151:1531-1545.
-
(1999)
Genetics
, vol.151
, pp. 1531-1545
-
-
Force, A.1
Lynch, M.2
Pickett, F.B.3
Amores, A.4
Yan, Y.5
Postlethwait, J.6
-
12
-
-
0016436505
-
Darwinian evolution in the genealogy of haemoglobin
-
Goodman M Moorse, G.W., Matsuda, G.: Darwinian evolution in the genealogy of haemoglobin. Nature 1975, 253:603-608.
-
(1975)
Nature
, vol.253
, pp. 603-608
-
-
Goodman, M.1
Moorse, G.W.2
Matsuda, G.3
-
13
-
-
0019255001
-
Selective neutrality of 6PGD allozymes in E. coli and the effects of genetic background
-
Dykhuizen D, Hartl DL: SELECTIVE NEUTRALITY OF 6PGD ALLOZYMES IN E. COLI AND THE EFFECTS OF GENETIC BACKGROUND. Genetics 1980, 96:801-817.
-
(1980)
Genetics
, vol.96
, pp. 801-817
-
-
Dykhuizen, D.1
Hartl, D.L.2
-
15
-
-
15544389841
-
Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution
-
He X Zhang, J.: Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution. Genetics 2005, 169:1157-1164.
-
(2005)
Genetics
, vol.169
, pp. 1157-1164
-
-
He, X.1
Zhang, J.2
-
16
-
-
20044369186
-
An adaptive radiation model for the origin of new gene functions
-
Francino MP: An adaptive radiation model for the origin of new gene functions. Nature Genetics 2005, 37:573-577.
-
(2005)
Nature Genetics
, vol.37
, pp. 573-577
-
-
Francino, M.P.1
-
17
-
-
0347356449
-
Selection on Coding Regions Determined Hox7 Genes Evolution
-
Fares MA, Bezemer D, Moya A, Marin I: Selection on Coding Regions Determined Hox7 Genes Evolution. Mol Biol Evol 2003, 20:2104-2112.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 2104-2112
-
-
Fares, M.A.1
Bezemer, D.2
Moya, A.3
Marin, I.4
-
18
-
-
0034819040
-
The ghost of selection past: Rates of evolution and functional divergence of anciently duplicated genes
-
Van de Peer Y Taylor, J.S., Braasch, I., Meyer, A.: The ghost of selection past: Rates of evolution and functional divergence of anciently duplicated genes. Journal of Molecular Evolution 2001, 53:636-446.
-
(2001)
Journal of Molecular Evolution
, vol.53
, pp. 636-446
-
-
Van De Peer, Y.1
Taylor, J.S.2
Braasch, I.3
Meyer, A.4
-
19
-
-
16644363392
-
Adaptive Evolution of HoxA-11 and HoxA-13 at the Origin of the Uterus in Mammals
-
Lynch VJ Roth, J.J., Takahashi, K., Dunn, C., Nonaka, D.F., Stopper, G., and Wagner, G.P.: Adaptive Evolution of HoxA-11 and HoxA-13 at the Origin of the Uterus in Mammals. Proceedings of the Royal Soceity of London B 2004, 271:2201-2207.
-
(2004)
Proceedings of the Royal Soceity of London B
, vol.271
, pp. 2201-2207
-
-
Lynch, V.J.1
Roth, J.J.2
Takahashi, K.3
Dunn, C.4
Nonaka, D.F.5
Stopper, G.6
Wagner, G.P.7
-
20
-
-
28944450051
-
The Fish Specific Hox Cluster Duplication is Coincident with the Origin of Teleosts
-
in press
-
Crow K Stadler, P., Lynch, V.J., Amemiya, C., Wagner, G.P.: The Fish Specific Hox Cluster Duplication is Coincident With the Origin of Teleosts. Molecular Biology and Evolution in press.
-
Molecular Biology and Evolution
-
-
Crow, K.1
Stadler, P.2
Lynch, V.J.3
Amemiya, C.4
Wagner, G.P.5
-
22
-
-
0344736730
-
Hox clusters duplications and the opportunity for evolutionary novelties
-
Wagner GP Amemiya, C., Ruddle, F.: Hox clusters duplications and the opportunity for evolutionary novelties. Proceedings of the National Acadmey of Sciences, USA 2003, 100:14603-14606.
-
(2003)
Proceedings of the National Acadmey of Sciences, USA
, vol.100
, pp. 14603-14606
-
-
Wagner, G.P.1
Amemiya, C.2
Ruddle, F.3
-
23
-
-
23044529744
-
Genome duplications and accelerated evolution of Hox genes and cluster architecture in teleost fishes
-
Malaga-Trillo EAM: Genome duplications and accelerated evolution of Hox genes and cluster architecture in teleost fishes. American Zoologist 2001, 41:676-686.
-
(2001)
American Zoologist
, vol.41
, pp. 676-686
-
-
Malaga-Trillo, E.A.M.1
-
24
-
-
0034628489
-
Maintenance of functional equivalence during paralogous Hox gene evolution
-
Greer JM Puetz, J., Thomas, K.R., Capecchi, M.R.: Maintenance of functional equivalence during paralogous Hox gene evolution. Nature 2000, 403:661-665.
-
(2000)
Nature
, vol.403
, pp. 661-665
-
-
Greer, J.M.1
Puetz, J.2
Thomas, K.R.3
Capecchi, M.R.4
-
25
-
-
0025647969
-
Human Hox-4.2 and Drosophila deformed encode similar regulatory specificities in Drosophila embryos and marvae
-
McGinnis N Kuziora, M.A., McGinnis, W.: Human Hox-4.2 and Drosophila deformed encode similar regulatory specificities in Drosophila embryos and marvae. Cell 1990:969-976.
-
(1990)
Cell
, pp. 969-976
-
-
McGinnis, N.1
Kuziora, M.A.2
McGinnis, W.3
-
26
-
-
0026703840
-
A human Hox4B regulatory selemtns provides head-specific expression in Drosophila embryos
-
Malicki J Clianetti, L.C., Paschle, C., McGinnis, W.: A human Hox4B regulatory selemtns provides head-specific expression in Drosophila embryos. Nature 1992, 358:345-347.
-
(1992)
Nature
, vol.358
, pp. 345-347
-
-
Malicki, J.1
Clianetti, L.C.2
Paschle, C.3
McGinnis, W.4
-
27
-
-
0026635184
-
Deformed autoregulatory element from Drosophila functions in a conserved manner in transgenic mice
-
Awgulewitsch A Jacobs, D.: Deformed autoregulatory element from Drosophila functions in a conserved manner in transgenic mice. Nature 1992:341-334.
-
(1992)
Nature
, pp. 341-334
-
-
Awgulewitsch, A.1
Jacobs, D.2
-
28
-
-
0029898776
-
Functional equivalence and rescue among group 11 Hox gene products in vertebral patterning
-
Zakany J Gerard, M., Favier, B., Potter, S.S., Duboule, D.: Functional equivalence and rescue among group 11 Hox gene products in vertebral patterning. Developmental Biology 1996, 176:325-328.
-
(1996)
Developmental Biology
, vol.176
, pp. 325-328
-
-
Zakany, J.1
Gerard, M.2
Favier, B.3
Potter, S.S.4
Duboule, D.5
-
29
-
-
0027223344
-
The mouse Hox-1.3 is functionally equivalent to the Drosophila sex combs reduced gene
-
Zhao JJ Lazzarini, R.A., Pick, L.: The mouse Hox-1.3 is functionally equivalent to the Drosophila sex combs reduced gene. Genes and Development 1993, 7:343-354.
-
(1993)
Genes and Development
, vol.7
, pp. 343-354
-
-
Zhao, J.J.1
Lazzarini, R.A.2
Pick, L.3
-
31
-
-
0036534442
-
Functional comparison of the Hoxa 4, Hoxa 10, and Hoxa 11 homeoboxes
-
Zhao Y Potter, S.S.: Functional comparison of the Hoxa 4, Hoxa 10, and Hoxa 11 homeoboxes. Developmental Biology 2002, 224:21-36.
-
(2002)
Developmental Biology
, vol.224
, pp. 21-36
-
-
Zhao, Y.1
Potter, S.S.2
-
32
-
-
0034840170
-
Functional specificity of the Hoxa13 homeobox
-
Zhao Y Potter, S.S.: Functional specificity of the Hoxa13 homeobox. Development 2001, 128:3197-3207.
-
(2001)
Development
, vol.128
, pp. 3197-3207
-
-
Zhao, Y.1
Potter, S.S.2
-
33
-
-
0031127044
-
Hox genes in evolution: Protein surfaces and paralog groups
-
Sharkey M Graba, Y., Scott, M.P: Hox genes in evolution: protein surfaces and paralog groups. Trends in Genetics 1997, 13:145-151.
-
(1997)
Trends in Genetics
, vol.13
, pp. 145-151
-
-
Sharkey, M.1
Graba, Y.2
Scott, M.P.3
-
34
-
-
0037968852
-
Functional divergence in protein (family) sequence evolution
-
Gu X: Functional divergence in protein (family) sequence evolution. Genetica 2003, 118:133-141.
-
(2003)
Genetica
, vol.118
, pp. 133-141
-
-
Gu, X.1
-
35
-
-
33748784344
-
A simple statistical method for estimating type-II (cluster-specific) functional divergence of protein sequences
-
Gu X: A simple statistical method for estimating type-II (cluster-specific) functional divergence of protein sequences. molecular biology and evolution 2006, 23:1937-1945.
-
(2006)
Molecular Biology and Evolution
, vol.23
, pp. 1937-1945
-
-
Gu, X.1
-
36
-
-
0036205440
-
DIVERGE: Phylogeny based analysis for functional-structural divergence of a protein family
-
Gu X Vander Velden, K.: DIVERGE: phylogeny based analysis for functional-structural divergence of a protein family. Bioinformatics 2002, 18:500-501.
-
(2002)
Bioinformatics
, vol.18
, pp. 500-501
-
-
Gu, X.1
Vander Velden, K.2
-
37
-
-
0032728408
-
Statistical methods for testing functional divergence after gene duplication
-
Gu X: Statistical methods for testing functional divergence after gene duplication. molecular biology and evolution 1999, 16:1664-1674.
-
(1999)
Molecular Biology and Evolution
, vol.16
, pp. 1664-1674
-
-
Gu, X.1
-
38
-
-
0034897709
-
Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution
-
Anisimova M Bielawski, J.P., Yang, Z.: Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution. Molecular biology and evolution 2001, 18:1585-1592.
-
(2001)
Molecular Biology and Evolution
, vol.18
, pp. 1585-1592
-
-
Anisimova, M.1
Bielawski, J.P.2
Yang, Z.3
-
39
-
-
0031897964
-
Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution
-
Yang Z: Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution. Mol Biol Evol 1998, 15:568-573.
-
(1998)
Mol Biol Evol
, vol.15
, pp. 568-573
-
-
Yang, Z.1
-
40
-
-
0030683599
-
PAML. A program package for phylogenetic analysis by maximum likelihood
-
Yang Z: PAML. a program package for phylogenetic analysis by maximum likelihood. CABIOS 1997, 13:555-556.
-
(1997)
CABIOS
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
41
-
-
0037202384
-
An algorithm for detecting directional and non-directional positive selection, neutrality and negative selection in protein coding DNA sequences
-
Creevey CJ McInerney, J.O.: An algorithm for detecting directional and non-directional positive selection, neutrality and negative selection in protein coding DNA sequences. Genetica 2002, 300:43-51.
-
(2002)
Genetica
, vol.300
, pp. 43-51
-
-
Creevey, C.J.1
McInerney, J.O.2
-
42
-
-
0002285622
-
Genetic systems and evolutionary rates
-
Edited by: MF CKSWD. London, Allen & Unwin
-
Templeton A: Genetic systems and evolutionary rates. In Rates of Evolutionq Edited by: MF CKSWD. London, Allen & Unwin; 1987:218-234.
-
(1987)
Rates of Evolutionq
, pp. 218-234
-
-
Templeton, A.1
-
43
-
-
0026428610
-
Adaptive protein evolution at the Adh locus in Drosophila
-
McDonald JH Kreitman, M.: Adaptive protein evolution at the Adh locus in Drosophila. Nature 1991, 351:652-654.
-
(1991)
Nature
, vol.351
, pp. 652-654
-
-
McDonald, J.H.1
Kreitman, M.2
-
44
-
-
0036270185
-
Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages
-
Yang Z Nielsen, R.: Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. molecular biology and evolution 2002, 19:908-917.
-
(2002)
Molecular Biology and Evolution
, vol.19
, pp. 908-917
-
-
Yang, Z.1
Nielsen, R.2
-
45
-
-
16344378246
-
Bayes Empirical Bayes Inference of Amino Acid Sites under Positive Selection
-
Yang Z, Wong WSW, Nielsen R: Bayes Empirical Bayes Inference of Amino Acid Sites Under Positive Selection. Mol Biol Evol 2005, 22:1107-1118.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1107-1118
-
-
Yang, Z.1
Wong, W.S.W.2
Nielsen, R.3
-
46
-
-
2142738304
-
WebLogo: A sequence logo generator
-
Crooks GE Hon, G., Chandonia, J.M., Brenner, S.E.,: WebLogo: A sequence logo generator. Genome Research 2004, 14:1188-1190.
-
(2004)
Genome Research
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
47
-
-
0025008168
-
Sequence Logos: A new way to display consensus sequences
-
Schneider TDS R.M.: Sequence Logos: A new way to display consensus sequences. Nucleic Acids Research 1990, 18:6097.
-
(1990)
Nucleic Acids Research
, vol.18
, pp. 6097
-
-
Schneider, T.D.S.1
Mo, R.2
-
48
-
-
4544348050
-
HOXB6 Protein Is Bound to CREB-binding Protein and Represses Globin Expression in a DNA Binding-dependent, PBX Interaction-independent Process
-
Shen W, Chrobak D, Krishnan K, Lawrence HJ, Largman C: HOXB6 Protein Is Bound to CREB-binding Protein and Represses Globin Expression in a DNA Binding-dependent, PBX Interaction-independent Process. J Biol Chem 2004, 279:39895-39904.
-
(2004)
J Biol Chem
, vol.279
, pp. 39895-39904
-
-
Shen, W.1
Chrobak, D.2
Krishnan, K.3
Lawrence, H.J.4
Largman, C.5
-
49
-
-
0029811475
-
HMG1 interacts with HOX proteins and enhances thier DNA binding and transcriptional activation
-
Zappavigna V Falciola, L., Helmer-Citterich, M., Mavilo, F., Bianchi, M.E.: HMG1 interacts with HOX proteins and enhances thier DNA binding and transcriptional activation. EMBO Journal 1996, 15:4981-4991.
-
(1996)
EMBO Journal
, vol.15
, pp. 4981-4991
-
-
Zappavigna, V.1
Falciola, L.2
Helmer-Citterich, M.3
Mavilo, F.4
Bianchi, M.E.5
-
50
-
-
0035808470
-
A set of Hox proteins interact with the Maf oncoprotein to inhibit its DNA binding, transactivation, and transforming activities
-
Kataoka K Yoshitomo-Nakagawa, K., Shioda, S., Nishizawa, M.: A set of Hox proteins interact with the Maf oncoprotein to inhibit its DNA binding, transactivation, and transforming activities. Journal of Biological Chemistry 2001, 276:819-826.
-
(2001)
Journal of Biological Chemistry
, vol.276
, pp. 819-826
-
-
Kataoka, K.1
Yoshitomo-Nakagawa, K.2
Shioda, S.3
Nishizawa, M.4
-
51
-
-
1442305333
-
The cell-cycle regulator geminin inhibits hox function through direct and polycomb-mediated interactions
-
Luo L Yang, X., Takihara, Y., Knoetgen, H., Kessel, M.: The cell-cycle regulator geminin inhibits hox function through direct and polycomb-mediated interactions. Nature 2004, 427:749-753.
-
(2004)
Nature
, vol.427
, pp. 749-753
-
-
Luo, L.1
Yang, X.2
Takihara, Y.3
Knoetgen, H.4
Kessel, M.5
-
52
-
-
0043031450
-
Hox proteins functionally cooperate with the GC box-binding protein system through distinct domains
-
Suzuki M Ueno. N., Kuroiwa, A.: Hox proteins functionally cooperate with the GC box-binding protein system through distinct domains. Journal of Biological Chemistry 2003, 278:30148-30156.
-
(2003)
Journal of Biological Chemistry
, vol.278
, pp. 30148-30156
-
-
Suzuki, M.1
Ueno, N.2
Kuroiwa, A.3
-
53
-
-
0032813156
-
A short region of its homeodomain is necessary for engrailed nuclear export
-
Maizel A Bensaude, O., Prochiantz, A., Joliot, A.: A short region of its homeodomain is necessary for engrailed nuclear export. Development 1999, 126:3183-3190.
-
(1999)
Development
, vol.126
, pp. 3183-3190
-
-
Maizel, A.1
Bensaude, O.2
Prochiantz, A.3
Joliot, A.4
|