-
1
-
-
0032573579
-
Zebrafish hox clusters and vertebrate genome evolution
-
Amores A, Force A, Yan YL, Joly L, Amemiya C, Fritz A, Ho RK, Langeland J, Prince V, Wang YL, Westerfield M, Ekker M, Postlethwait JH. 1998. Zebrafish hox clusters and vertebrate genome evolution. Science 282:1711-1714.
-
(1998)
Science
, vol.282
, pp. 1711-1714
-
-
Amores, A.1
Force, A.2
Yan, Y.L.3
Joly, L.4
Amemiya, C.5
Fritz, A.6
Ho, R.K.7
Langeland, J.8
Prince, V.9
Wang, Y.L.10
Westerfield, M.11
Ekker, M.12
Postlethwait, J.H.13
-
2
-
-
34047267637
-
A canonical decomposition theory for metrics on a finite set
-
Bandelt HJ, Dress AWM. 1992. A canonical decomposition theory for metrics on a finite set. Adv Math 92:47.
-
(1992)
Adv Math
, vol.92
, pp. 47
-
-
Bandelt, H.J.1
Dress, A.W.M.2
-
3
-
-
0031962457
-
Molecular evolution of Hox gene regulation: Cloning and transgenic analysis of the lamprey HoxQ8 gene
-
Carr JL, Shashikant CS, Bailey WJ, Ruddle FH. 1998. Molecular evolution of Hox gene regulation: cloning and transgenic analysis of the lamprey HoxQ8 gene. J Exp Zool 280:73-85.
-
(1998)
J Exp Zool
, vol.280
, pp. 73-85
-
-
Carr, J.L.1
Shashikant, C.S.2
Bailey, W.J.3
Ruddle, F.H.4
-
4
-
-
0037117587
-
Molecular evolution of the HoxA cluster in the three major gnathostome lineages
-
Chiu Ch, Amemiya C, Dewar K, Kim CB, Ruddle FH, Wagner GP. 2002. Molecular evolution of the HoxA cluster in the three major gnathostome lineages. Proc Natl Acad Sci USA 99:5492-5497.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 5492-5497
-
-
Chiu, Ch.1
Amemiya, C.2
Dewar, K.3
Kim, C.B.4
Ruddle, F.H.5
Wagner, G.P.6
-
5
-
-
2242464840
-
The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins
-
Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KEM, Ho I, Hotta K, Huang W, Kawashima T, Lemaire P, Martinez D, Meinertzhagen IA, Necula S, Nonaka M, Putnam N, Rash S, Saiga H, Satake M, Terry A, Yamada L, Wang HG, Awazu S, Azumi K, Boore J, Branno M, Chin-bow S, DeSantis R, Doyle S, Francino P, Keys DN, Haga S, Hayashi H, Hino K, Imai KS, Inaba K, Kano S, Kobayashi K, Kobayashi M, Lee BI, Makabe KW, Manohar C, Matassi G, Medina M, Mochizuki Y, Mount S, Morishita T, Miura S, Nakayama A, Nishizaka S, Nomoto H, Ohta F, Oishi K, Rigoutsos I, Sano M, Sasaki A, Sasakura Y, Shoguchi E, Shin-i T, Spagnuolo A, Stainier D, Suzuki MM, Tassy O, Takatori N, Tokuoka M, Yagi K, Yoshizaki F, Wada S, Zhang C, Hyatt PD, Larimer F, Detter C, Doggett N, Glavina T, Hawkins T, Richardson P, Lucas S, Levine YKM, Satoh N, Rokhsar DS. 2002. The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins. Science 298:2157-2167.
-
(2002)
Science
, vol.298
, pp. 2157-2167
-
-
Dehal, P.1
Satou, Y.2
Campbell, R.K.3
Chapman, J.4
Degnan, B.5
De Tomaso, A.6
Davidson, B.7
Di Gregorio, A.8
Gelpke, M.9
Goodstein, D.M.10
Harafuji, N.11
Hastings, K.E.M.12
Ho, I.13
Hotta, K.14
Huang, W.15
Kawashima, T.16
Lemaire, P.17
Martinez, D.18
Meinertzhagen, I.A.19
Necula, S.20
Nonaka, M.21
Putnam, N.22
Rash, S.23
Saiga, H.24
Satake, M.25
Terry, A.26
Yamada, L.27
Wang, H.G.28
Awazu, S.29
Azumi, K.30
Boore, J.31
Branno, M.32
Chin-bow, S.33
DeSantis, R.34
Doyle, S.35
Francino, P.36
Keys, D.N.37
Haga, S.38
Hayashi, H.39
Hino, K.40
Imai, K.S.41
Inaba, K.42
Kano, S.43
Kobayashi, K.44
Kobayashi, M.45
Lee, B.I.46
Makabe, K.W.47
Manohar, C.48
Matassi, G.49
Medina, M.50
Mochizuki, Y.51
Mount, S.52
Morishita, T.53
Miura, S.54
Nakayama, A.55
Nishizaka, S.56
Nomoto, H.57
Ohta, F.58
Oishi, K.59
Rigoutsos, I.60
Sano, M.61
Sasaki, A.62
Sasakura, Y.63
Shoguchi, E.64
Shin-i, T.65
Spagnuolo, A.66
Stainier, D.67
Suzuki, M.M.68
Tassy, O.69
Takatori, N.70
Tokuoka, M.71
Yagi, K.72
Yoshizaki, F.73
Wada, S.74
Zhang, C.75
Hyatt, P.D.76
Larimer, F.77
Detter, C.78
Doggett, N.79
Glavina, T.80
Hawkins, T.81
Richardson, P.82
Lucas, S.83
Levine, Y.K.M.84
Satoh, N.85
Rokhsar, D.S.86
more..
-
7
-
-
0036725608
-
Analysis of lamprey and hag-fish genes reveals a complex history of gene duplications during early vertebrate evolution
-
Escriva H, Manzon L, Youson J, Laudet V. 2002. Analysis of lamprey and hag-fish genes reveals a complex history of gene duplications during early vertebrate evolution. Mol Biol Evol 19:1440-1450.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1440-1450
-
-
Escriva, H.1
Manzon, L.2
Youson, J.3
Laudet, V.4
-
8
-
-
0000122573
-
Phylip - Phylogeny inference package (version 3.2)
-
Felsenstein J. 1989. Phylip - phylogeny inference package (version 3.2). Cladistics 5:164-166.
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
9
-
-
0037092011
-
Hox cluster organization in the jawless vertebrate Petromyzon marinus
-
Force A, Amores A, Postlethwait JH. 2002. Hox cluster organization in the jawless vertebrate Petromyzon marinus. J Exp Zool Mol Dev Evol 294:30-46.
-
(2002)
J Exp Zool Mol Dev Evol
, vol.294
, pp. 30-46
-
-
Force, A.1
Amores, A.2
Postlethwait, J.H.3
-
10
-
-
0028065237
-
Archetypal organization of the amphioxus hox gene cluster
-
Garcia-Fern_andez J, Holland PW. 1994. Archetypal organization of the amphioxus hox gene cluster. Nature 370:563-566.
-
(1994)
Nature
, vol.370
, pp. 563-566
-
-
Garcia-Fernandez, J.1
Holland, P.W.2
-
11
-
-
0034889908
-
Structural evolution of otx genes in craniates
-
Germot A, Lecointre G, Plouhinec JL, Le Mentec C, Girardot F, Mazan S. 2001. Structural evolution of otx genes in craniates. Mol Biol Evol 18:1668-1678.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1668-1678
-
-
Germot, A.1
Lecointre, G.2
Plouhinec, J.L.3
Le Mentec, C.4
Girardot, F.5
Mazan, S.6
-
13
-
-
0031678692
-
Splitstree: Analyzing and visualizing evolutionary data
-
Huson DH. 1998. Splitstree: analyzing and visualizing evolutionary data. Bioinformatics 14:68-73.
-
(1998)
Bioinformatics
, vol.14
, pp. 68-73
-
-
Huson, D.H.1
-
14
-
-
0037091997
-
Genomic analysis of Hox clusters in the sea lamprey, Petromyzon marinus
-
Irvine SQ, Carr JL, Bailey WJ, Kawasaki K, Shimizu N, Amemiya CT, Ruddle FH. 2002. Genomic analysis of Hox clusters in the sea lamprey, Petromyzon marinus. J Exp Zool Mol Dev Evol 294:47-62.
-
(2002)
J Exp Zool Mol Dev Evol
, vol.294
, pp. 47-62
-
-
Irvine, S.Q.1
Carr, J.L.2
Bailey, W.J.3
Kawasaki, K.4
Shimizu, N.5
Amemiya, C.T.6
Ruddle, F.H.7
-
15
-
-
0037417894
-
Hox gene clusters in the indonesian coelacanth, Latimeria menadoensis
-
Koh EGL, Lam K, Christoffels A, Erdmann MV, Brenner S, Venkatesh B. 2003. Hox gene clusters in the indonesian coelacanth, Latimeria menadoensis. Proc Natl Acad Sci USA 100:1084-1088.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 1084-1088
-
-
Koh, E.G.L.1
Lam, K.2
Christoffels, A.3
Erdmann, M.V.4
Brenner, S.5
Venkatesh, B.6
-
16
-
-
0026504525
-
Homeobox genes and axial patterning
-
McGinnis W, Krumlauf R. 1992. Homeobox genes and axial patterning. Cell 68:283-302.
-
(1992)
Cell
, vol.68
, pp. 283-302
-
-
McGinnis, W.1
Krumlauf, R.2
-
17
-
-
0036848558
-
Amphioxus and lamprey AP-2 genes: Implications for neural crest evolution and migration patterns
-
Meulemans D, Bronner-Fraser M. 2002. Amphioxus and lamprey AP-2 genes: implications for neural crest evolution and migration patterns. Development 129:4953-4962.
-
(2002)
Development
, vol.129
, pp. 4953-4962
-
-
Meulemans, D.1
Bronner-Fraser, M.2
-
18
-
-
0032945593
-
DIALIGN 2: Improvement of the segment-to-segment approach to multiple sequence alignment
-
Morgenstern B. 1999. DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment. Bioinformatics 15:211-218.
-
(1999)
Bioinformatics
, vol.15
, pp. 211-218
-
-
Morgenstern, B.1
-
19
-
-
0035852622
-
Lamprey dlx genes and early vertebrate evolution
-
Neidert AH, Virupannavar V, Hooker GW, Langeland JA, 2001. Lamprey dlx genes and early vertebrate evolution. Proc Natl Acad Sci USA 98:1665-1670.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 1665-1670
-
-
Neidert, A.H.1
Virupannavar, V.2
Hooker, G.W.3
Langeland, J.A.4
-
21
-
-
0346774873
-
Surveying phylogenetic footprints in large gene clusters: Applications to Hox cluster duplications
-
in press
-
Prohaska S, Fried C, Flamm C, Wagner G, Stadler PF. 2003a. Surveying phylogenetic footprints in large gene clusters: Applications to Hox cluster duplications. Mol Phylog Evol (in press).
-
(2003)
Mol Phylog Evol
-
-
Prohaska, S.1
Fried, C.2
Flamm, C.3
Wagner, G.4
Stadler, P.F.5
-
22
-
-
0842334025
-
The shark HoxN cluster is homologous to the human HoxD cluster
-
in press
-
Prohaska SJ, Fried C, Amemiya CT, Ruddle FH, Wagner GP, Stadler PF. 2003b. The shark HoxN cluster is homologous to the human HoxD cluster. J Mol Evol (in press).
-
(2003)
J Mol Evol
-
-
Prohaska, S.J.1
Fried, C.2
Amemiya, C.T.3
Ruddle, F.H.4
Wagner, G.P.5
Stadler, P.F.6
-
23
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
24
-
-
0027395830
-
The antennapedia-type homeobox genes have evolved from three precursors separated early in metazoan evolution
-
Schubert FR, Nieselt-Struwe K, Gruss P. 1993. The antennapedia-type homeobox genes have evolved from three precursors separated early in metazoan evolution. Proc Natl Acad Sci USA 90:143-147.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 143-147
-
-
Schubert, F.R.1
Nieselt-Struwe, K.2
Gruss, P.3
-
26
-
-
0031780257
-
Estimation of Hox gene cluster number in lampreys
-
Sharman AC, Holland PW, 1998. Estimation of Hox gene cluster number in lampreys. Int J Dev Biol 42:617-620.
-
(1998)
Int J Dev Biol
, vol.42
, pp. 617-620
-
-
Sharman, A.C.1
Holland, P.W.2
-
27
-
-
0033209205
-
Hox gene duplications in fish
-
Stellwag EJ. 1999. Hox gene duplications in fish. Cell Devel Biol 10:531-540.
-
(1999)
Cell Devel Biol
, vol.10
, pp. 531-540
-
-
Stellwag, E.J.1
|