The nucleotide-binding site of Aquifex aeolicus LpxC

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 62, Issue 11, 2006, Pages 1082-1086

  Buetow, Lori ^a   Dawson, Alice ^a   Hunter, William N ^a  

^a UNIVERSITY OF DUNDEE   (United Kingdom)

Author keywords

Aquifex aeolicus; Lipid A; LpxC

Indexed keywords

AMIDASE; BACTERIAL PROTEIN; N ACETYLGLUCOSAMINE DEACETYLASE; N-ACETYLGLUCOSAMINE DEACETYLASE; PRIMER DNA; RECOMBINANT PROTEIN; URIDINE DIPHOSPHATE;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; ENZYMOLOGY; GENETICS; GRAM NEGATIVE BACTERIUM; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PROTEIN CONFORMATION; X RAY CRYSTALLOGRAPHY;

AMIDOHYDROLASES; BACTERIAL PROTEINS; BASE SEQUENCE; CLONING, MOLECULAR; CRYSTALLOGRAPHY, X-RAY; DNA PRIMERS; GRAM-NEGATIVE BACTERIA; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PROTEIN CONFORMATION; RECOMBINANT PROTEINS; URIDINE DIPHOSPHATE;

AQUIFEX AEOLICUS;

EID: 33750592913     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309106041893     Document Type: Article

References (30)

1. Coggins, B. E., Li, X., McClerren, A. L., Hindsgaul, O., Raetz, C. R. & Zhou, P. (2003). Nature Struct. Biol. 10, 645-651.
2. Coggins, B. E., McClerren, A. L., Jiang, L., Li, X., Rudolph, J., Hindsgaul, O., Raetz, C. R. & Zhou, P. (2005). Biochemistry, 44, 1114-1126.
3. Cohen, J. (2002). Nature (London), 420, 885-891.
4. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
5. Cruickshank, D. W. J. (1999). Acta Cryst. D55, 583-601.
6. DeLano, W. L. (2002). The PyMOL Molecular Graphics System. DeLano Scientific, San Carlos, CA, USA.
7. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
8. Evans, P. R. (1997). Jnt CCP4/ESF-EACBM Newsl. Protein Crystallogr. 33, 22-24.
9. Galanos, C., Luderitz, O., Rietschel, E. T., Westphal, O., Brade, H., Brade, L., Freudenberg, M., Schade, U., Imoto, M. & Yoshimura, H. (1985). Eur. J. Biochem. 148, 1-5.
10. Gennadios, H. A., Whittington, D. A., Li, X., Fierke, C. A. & Christianson, D. W. (2006). Biochemistry, 45, 7940-7948.
11. Hernick, M., Gennadios, H. A., Whittington, D. A., Rusche, K. M., Christianson, D. W. & Fierke, C. A. (2005). J. Biol. Chem. 280, 16969-16978.
12. Higuchi, R., Krummel, B. & Saiki, R. K. (1988). Nucleic Acids Res. 16, 7351-7367.
13. Jackman, J. E., Fierke, C. A., Tumey, L. N., Pirrung, M., Uchiyama, T., Tahir, S. H., Hindsgaul, O. & Raetz, C. R. (2000). J. Biol. Chem. 275, 11002-11009.
14. Jackman, J. E., Raetz, C. R. & Fierke, C. A. (1999). Biochemistry, 38, 1902-1911.
15. Jackman, J. E., Raetz, C. R. & Fierke, C. A. (2001). Biochemistry, 40, 514-523.
16. Jones, T. A., Zou, J.-Y., Cowan, S. W. & Kjeldgaard, M. (1991). Acta Cryst. A47, 110-119.
17. Kline, T., Andersen, N. H., Harwood, E. A., Bowman, J., Malanda, A., Endsley, S., Erwin, A. L., Doyle, M., Fong, S., Harris, A. L., Mendelsohn, B., Mdluli, K., Raetz, C. R., Stover, C. K., Witte, P. R., Yabannavar, A. & Zhu, S. (2002). J. Med. Chem. 45, 3112-3129.
18. Leslie, A. G. W. (1992). Jnt. CCP4/ESF-EACBM Newsl. Protein Crystallogr. 26.
19. Lopez-Bojorquez, L. N., Dehesa, A. Z. & Reyes-Teran, G. (2004). Arch. Med. Res. 35, 465-479.
20. McClerren, A. L., Zhou, P., Guan, Z., Raetz, C. R. & Rudolph, J. (2005). Biochemistry, 44, 1106-1113.
21. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
22. Nair, S. K., Calderone, T. L., Christianson, D. W. & Fierke, C. A. (1991). J. Biol. Chem. 266, 17320-17325.
23. Nikaido, H. (2003). Microbiol. Mol. Biol. Rev. 67, 593-656.
24. Onishi, H. R., Pelak, B. A., Gerckens, L. S., Silver, L. L., Kahan, F. M., Chen, M. H., Patchett, A. A., Galloway, S. M., Hyland, S. A., Anderson, M. S. & Raetz, C. R. (1996). Science, 274, 980-982.
25. Pirrung, M. C., Tumey, L. N., Raetz, C. R., Jackman, J. E., Snehalatha, K., McClerren, A. L., Fierke, C. A., Gantt, S. L. & Rusche, K. M. (2002). J. Med. Chem. 45, 4359-4370.
26. Raetz, C. R. & Whitfield, C. (2002). Annu. Rev. Biochem. 71, 635-700.
27. Schüttelkopf, A. W. & van Aalten, D. M. (2004). Acta Cryst. D60, 1355-1363.
28. Vagin, A. & Teplyakov, A. (2000). Acta Cryst. D56, 1622-1624.
29. Whittington, D. A., Rusche, K. M., Shin, H., Fierke, C. A. & Christianson, D. W. (2003). Proc. Natl Acad. Sci. USA, 100, 8146-8150.
30. Young, K., Silver, L. L., Bramhill, D., Cameron, P., Eveland, S. S., Raetz, C. R., Hyland, S. A. & Anderson, M. S. (1995). J. Biol. Chem. 270, 30384-30391.