Photoactive nanomaterials for sensing trace analytes in biological samples

Synthesis and Reactivity in Inorganic, Metal-Organic and Nano-Metal Chemistry

Volumn 35, Issue 9, 2005, Pages 661-668

  Liang, Song ^a   Pierce, David T ^a   Amiot, Carrie ^a   Zhao, Xaiojun ^a  

^a UNIVERSITY OF NORTH DAKOTA   (United States)

Author keywords

Bioanalysis; Fluorescence; Nanosensor; Photoactive; Silica nanoparticles

Indexed keywords

EID: 33646381368     PISSN: 15533174     EISSN: 15533182     Source Type: Journal    
DOI: 10.1080/15533170500299859     Document Type: Review

References (67)

1. Alivisatos, A. P. Semiconductor clusters, nanocrystals, and quantum dots. Science 1996, 277, 933-937.
2. Arnim, H. Small-particle research: physiochemical properties of extremely small colloidal metal and semiconductor particles. Chem. Rev. 1989, 89, 1861-1873.
3. Aslan, K.; Lakowicz, J. R.; Geddes, C. D. Nanogold-plasmon-resonance-based glucose sensing. Anal. Biochem. 2004a, 330 (1), 145-155.
4. Aslan, K.; Zhang, L.; Lakowicz, J. R.; Geddes, C. D. Saccharide sensing using gold and silver nanoparticles - a review. J. Fluor. 2004b, 14, 391-400.
5. Aslan, K.; Lakowicz, J. R.; Geddes, C. D. Nanogold plasmon resonance-based glucose sensing. 2. Wavelength-ratiometric resonance light scattering. Anal. Chem. 2005, 77 (7), 2007-2014.
6. Bailey, R. C.; Nam, J.; Mirkin, C. A.; Hupp, J. T. Real-time multicolor DNA detection with chemoresponsive diffraction gratings and nanoparticle probes. J. Am. Chem. Soc. 2003, 125 (44), 13541-13547.
7. Bettelheim, K. A.; Beutin, L. Rapid laboratory identification and characterization of verocytotoxigenic (shiga toxin producing) Escherichia coli (VTEC/STEC). J. Appl. Microbiol. 2003, 95 (2), 205-217.
8. Brasuel, M.; Kopelman, R.; Aylott, J. W.; Clark, H.; Xu, H.; Hoyer, M.; Miller, T. J.; Tjalkens, R.; Philbert, M. A. Production, characteristics and applications of fluorescent PEBBLE nanosensors: potassium, oxygen, calcium and pH imaging inside live cells. Sensors Mater. 2002, 14 (6), 309-338.
9. Brasuel, M.; Kopelman, R.; Miller, T. J.; Tjalkens, R.; Philbert, M. A. Fluorescent nanosensors for intracellular chemical analysis: decyl methacrylate liquid polymer matrix and ion-exchange-based potassium PEBBLE sensors with real-time application to viable rat C6 glioma cells. Anal. Chem. 2001, 73, 2221-2228.
10. Bruchez, M., Jr.; Moronne, M.; Gin, P.; Weiss, S.; Aliyisatos, A. P. Semiconductor nanocrystals as fluorescent biological labels. Science 1998, 281, 2013-2016.
11. Cao, Y.; Jin, R.; Mirkin, C. A. DNA-modified core-shell Ag/Au nanoparticles. J. Am. Chem. Soc. 2001, 123 (32), 7961-7962.
12. Cao, Y. C.; Jin, R.; Mirkin, C. A. Nanoparticles with Raman spectroscopic fingerprints for DNA and RNA detection. Science 2002, 297 (5586), 1536-1540.
13. Cao, Y. C.; Jin, R.; Nam, J.; Thaxton, C. S.; Mirkin, C. A. Raman dye-labeled nanoparticle probes for proteins. J. Am. Chem. Soc. 2003, 125 (48), 14676-14677.
14. Clapp, A. R.; Medintz, I. L.; Fisher, B. R.; Anderson, G. P.; Mattoussi, H. Can luminescent quantum dots be efficient energy acceptors with organic dye donors? J. Am. Chem. Soc. 2005, 127, 1242-1250.
15. Clark, H. A.; Hoyer, M.; Parus, S.; Philbert, M. A.; Kopelman, R. Optochemical nanosensors and subcellular applications in living cells. Mikrochim. Acta 1999a, 131, 121-128.
16. Clark, H. A.; Hoyer, M.; Philbert, M. A.; Hopelman, R. Optical nanosensors for chemical analysis inside single living cells. 1. Fabrication, characterization, and methods for intracellular delivery of PEBBLE sensors. Anal. Chem. 1999b, 71, 4831-4836.
17. Clark, H. A.; Kopelman, R.; Tialkens, R.; Philbert, M. A. Optical nanosensors for chemical analysis inside single living cells. 2. Sensors for pH and calcium and the intracellular application of PEBBLE sensors. Anal. Chem. 1999c, 71, 4837-4843.
18. Delves, P. J., ed. Antibody Applications: Essential Techniques; Wiley: New York, 1995, 43-51.
19. Derfus, A. M.; Chan, W. C. W.; Bhatia, S. N. Probing the cytotoxicity of semiconductor quantum dots. Nano Lett. 2004, 4 (1), 11-18.
20. Drake, T. J.; Zhao, X. J.; Tan, W. Bioconjugated silica nanoparticles for bioanalytical applications. Nanobiotechnology 2004, 444-457.
21. Dubertret, B.; Skourides, P.; Norris, D. J.; Noireaux, V.; Brivanlou, A. H.; Libchaber, A. In vivo imaging of quantum dots encapsulated in phospholipid micelles. Science 2002, 298 (5599), 1759-1762.
22. Edwards, R., ed. Immunoassays: Essential Data; Wiley: New York, 1996, 84-87.
23. Esch, M. B.; Locascio, L. E.; Tarlov, M. J.; Durst, R. T. Detection of viable Cryptosporidium parvum using DNA-modified liposomes in a microfluidic chip. Anal. Chem. 2001, 73 (13), 2952-2958.
24. Gao, X.; Nie, S. Quantum dot-encoded mesoporous beads with high brightness and uniformity: rapid readout using flow cytometry. Anal. Chem. 2004a, 76, 2406-2410.
25. Gao, Z.; Cui, Y.; Levenson, R. M.; Chung, L. W. K.; Nie, S. In vivo cancer targeting and imaging with semiconductor quantum dots. Nat. Biotechnol. 2004b, 22 (8), 969-976.
26. He, L.; Smith, E. A.; Natan, M. J.; Keating, C. D. The distance-dependence of colloidal Au-amplified surface plasmon resonance. J. Phys. Chem. B 2004, 108 (30), 10973-10980.
27. Hilliard, L. R.; Zhao, X.; Tan, W. Immobilization of oligonucleotides onto silica nanoparticles for DNA hybridization studies. Anal. Chim. Acta 2002, 470, 51-56.
28. Ho, J.-a. A.; Durst, R. A. Development of a flow-injection liposome immunoanalysis system for fumonisin B1. Anal. Chim. Acta 2000a, 414 (1-2), 61-69.
29. Ho, J.-a. A.; Durst, R. A. Preparation of reagents for the determination of fumonisin B1 by flow-injection immunoanalysis. Anal. Chim. Acta 2000b, 414 (1-2), 51-60.
30. Hoshino, A.; Fujioka, K.; Oku, K.; Suga, M.; Sasaki, Y. F.; Ohta, T.; Yasuhara, M.; Suzuki, K.; Yamamoto, K. Probing the cytotoxicity of semiconductor quantum dots. Nano Lett. 2004, 4 (11), 2163-2169.
31. Koo, Y. L.; Cao, Y.; Kopelman, R.; Koo, S. M.; Brasuel, M.; Philbert, M. A. Real-time measurements of dissolved oxygen inside live cells by organically modified silicate fluorescent nanosensors. Anal. Chem. 2004, 76, 2498-2505.
32. Lagerholm, B. C.; Wang, M.; Ernst, L. A.; Ly, D. H.; Liu, H.; Bruchez, M. P.; Waggoner, A. S. Multicolor coding of cells with cationic peptide coated quantum dots. Nano Lett. 2004, 4 (10), 2019-2022.
33. Larson, D. R.; Zipfel, W. R.; Williams, R. M.; Clark, S. W.; Bruchez, M. P.; Wise, F. W.; Webb, W. W. Water-soluble quantum dots for multiphoton fluorescence imaging in vivo. Science 2003, 300, 1434-1436.
34. Lazarides, A. A.; Schatz, G. C. DNA-linked metal nanosphere materials: structural basis for the optical properties. J. Phys. Chem. B 2000, 104, 460-467.
35. Li, Z.; Jin, R.; Mirkin, C. A.; Letsinger, R. L. Multiple thiol-anchor capped DNA-gold nanoparticle conjugates. Nucleic Acids Res. 2002, 30 (7), 1558-1562.
36. Mafarland, A. D.; Van Duyne, R. P. Single silver nanoparticles as real-time optical sensors with zeptomole sensitivity. Nano. Lett. 2003, 3, 1057-1062.
37. Medintz, I. L.; Goldman, E. R.; Lassman, M. E.; Mauro, M. A fluorescence resonance energy transfer sensor based on maltose binding protein. Bioconjugate Chem. 2003, 14, 909-918.
38. Medintz, I. L.; Trammell, S. A.; Mattoussi, H.; Mouros, M. Reversible modulation of quantum dot photoluminescence using a protein-bound photochromic fluorescence resonance energy transfer acceptor. J. Am. Chem. Soc. 2004, 126, 30-31.
39. Michalet, X.; Pinaud, F. F.; Bentolila, L. A.; Tsay, J. M.; Doose, S.; Li, J. J.; Sundaresan, G.; Wu, A. M.; Gambhir, S. S.; Weiss, S. Quantum dots for live cells, in vivo imaging, and diagnostics. Science 2005, 307 (5709), 538-544.
40. Mirkin, C. A.; Letsinger, R. L.; Mucic, R. C.; Storhoff, J. J. A DNA-based method for rationally assembling nanoparticles into macroscopic materials. Nature 1996, 382, 607-609.
41. Nam, J.; Park, S.; Mirkin, C. A. Bio-barcodes based on oligonucleotide-modified nanoparticles. J. Am. Chem. Soc. 2002, 124 (15), 3820-3821.
42. Nath, N.; Chilkoti, A. A. Colorimetric gold nanoparticle sensor to interrogate biomolecular interactions in real time on a surface. Anal. Chem. 2002, 74 (3), 504-509.
43. Niazov, T.; Pavlov, V.; Xiao, Y.; Gill, R.; Willner, I. DNAzyme-functionalized Au nanoparticles for the amplified detection of DNA or telomerase activity. Nano Lett. 2004, 4 (9), 1683-1687.
44. Olofsson, L.; Rindzevicius, T.; Pfeiffer, I.; Kall, M.; Hook, F. Surface-based gold-nanoparticle sensor for specific and quantitative DNA hybridization detection. Langmuir 2003, 19 (24), 10414-10419.
45. Park, E. J.; Brasuel, M.; Behrend, C.; Philbert, M. A.; Kopelman, R. Ratiometric optical PEBBLE nanosensors for real-time magnesium ion concentrations inside. Anal. Chem. 2003, 75, 3784-3791.
46. Pathak, S.; Choi, S. K.; Arnheim, N.; Thompson, M. E. Hydroxylated quantum dots as luminescent probes for in situ hybridization. J. Am. Chem. Soc. 2001, 123 (17), 4103-4104.
47. Plant, A. L.; Brizgys, M. V.; Locasio-Brown, L.; Durst, R. A. Generic liposome reagent for immunoassays. Anal. Biochem. 1989, 176 (2), 420-426.
48. Retsinger, R. L.; Elghanian, R.; Viswanadham, G.; Mirkin, C. A. Use of a steroid cyclic disulfide anchor in constructing gold nanoparticle-oligonucleotide conjugates. Bioconjugate Chem. 2000, 11 (2), 289-291.
49. Santra, S.; Zhang, P.; Wang, K.; Tapec, R.; Tan, W. Conjugation of biomolecules with luminophore-doped silica nanoparticles for photostable biomarkers. Anal. Chem. 2001, 73 (20), 4988-4993.
50. Shortreed, M.; Kopelman, R.; Kuhn, M.; Hoyland, B. Fluorescent fiber-optic calcium sensor for physiological measurements. Anal. Chem. 1996, 68 (8), 1414-1418.
51. Storhoff, J. J.; Lazarides, A. A.; Mucic, R. C.; Mirkin, C. A. What controls the optical properties of DNA-linked gold? J. Am. Chem. Soc. 2000, 122, 4640-4650.
52. Sumner, J. P.; Aylott, J. W.; Monson, E.; Kopelman, R. A fluorescent PEBBLE nanosensor for intracellular free zinc. Analyst 2002, 127 (1), 11-16.
53. Tan, C.; Liang, R.; Ruan, K. Application of quantum dot to life science. Acta Biochim. Biophys. Sinica 2002, 34 (1), 1-5.
54. Taton, T. A.; Mirkin, C. A.; Letsinger, R. L. Scanometric DNA array detection with nanoparticle probes. Science 2000a, 289, 1757-1760.
55. Taton, T. A.; Mucic, R. C.; Mirkin, C. A.; Letsinger, R. L. The DNA-mediated formation of supramolecular mono- and multilayered nanoparticle structures. J. Am. Chem. Soc. 2000b, 122 (26), 6305-6306.
56. Thaxton, C. S.; Mirkin, C. A. DNA-gold-nanoparticle conjugates. Nanobiotechnology 2004, 288-307.
57. Underwood, D. F.; Kippeny, T.; Rosenthal, S. J. Ultrafast carrier dynamics in CdSe nanocrystals determined by femtosecond fluorescence upconversion Spectroscopy. J. Phys. Chem. B 2001, 105, 436-443.
58. Wang, S.; Mamedova, N.; Kotov, N. A.; Chen, W.; Studer, J. Antigen/antibody immunocomplex from CdTe nanoparticle bioconjugates. Nemo Lett. 2002, 2 (8), 817-822.
59. 3 Beads-CdSe/ZnS quantum dots core-shell nanocomposite particles for cell separation. Nano. Lett. 2004, 4 (3), 209-213.
60. Warren, C. W.; Nie, S. Quantum dot bioconjugates for ultrasensitive nonisotopic detection. Science 1998, 281, 2016-2018.
61. Willard, D. M.; Carillo, L. L.; Jung, J.; Orden, A. V. CdSe-ZnS quantum dots as resonance energy transfer donors in a model protein-protein binding assay. Nano Lett. 2001, 1 (9), 469-474.
62. Xu, H.; Aylott, J. W.; Kopelman, R.; Miller, T. J.; Philbert, M. A. A real-time ratiometric method for the determination of molecular oxygen inside living cells using sol-gel-based spherical optical nanosensors with applications to rat C6 glioma. Anal. Chem. 2001, 73, 4124-4133.
63. Zhang, C.; Zhang, Z.; Yu, B.; Shi, J.; Zhang, X. Application of the biological conjugate between antibody and colloid Au nanoparticles as analyte to inductively coupled plasma mass spectrometry. Anal. Chem. 2002, 74, 96-99.
64. Zhao, X.; Tapec-Dytioco, R.; Tan, W. Ultrasensitive DNA detection using highly fluorescent bioconjugated nanoparticles. J. Am. Chem. Soc. 2003a, 125, 11474-11475.
65. Zhao, X.; Tapec-Dytioco, R.; Wang, K.; Tan, W. Collection of trace amounts of DNA/mRNA molecules using genomagnetic nanocapturers. Anal. Chem. 2003b, 75, 3476-3484.
66. Zhao, X.; Hilliard, L. R.; Mechery, J. M.; Wang, Y.; Jin, S.; Tan, W. A rapid bioassay for single bacterial cell quantization using bioconjugated nanoparticles. Proc. Natl. Acad. Sci. USA 2004, 101 (42), 15027-15032.
67. Zheng, J.; Li, H.; Yeung, E. S. Manipulation of single DNA molecules via lateral focusing in a PDMS/glass microchannel. J. Phys. Chem. B 2004, 108, 10357-10362.