-
1
-
-
0030612613
-
Phage phi29 protein p6 is in a monomer-dimer equilibrium that shifts to higher association states at the millimolar concentrations found in vivo
-
Abril AM Salas M Andreu JM Hermoso JM Rivas G 1997 Phage phi29 protein p6 is in a monomer-dimer equilibrium that shifts to higher association states at the millimolar concentrations found in vivo Biochemistry 36 11901 11908
-
(1997)
Biochemistry
, vol.36
, pp. 11901-11908
-
-
Abril M, A.1
Salas, M.2
Andreu, J.M.3
Hermoso, J.M.4
Rivas, G.5
-
3
-
-
0033598784
-
Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis
-
Achtman M Zurth K Morelli G Torrea G Guiyoule A Carniel E 1999 Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis Proc Natl Acad Sci USA 96 14043 14048
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 14043-14048
-
-
Achtman M1
Zurth, K.2
Morelli, G.3
Torrea, G.4
Guiyoule, A.5
Carniel, E.6
-
4
-
-
0025063893
-
Evolution of aromatic amino acid biosynthesis and application to the fine-tuned phylogenetic positioning of enteric bacteria
-
Ahmad S Weisburg WG Jensen RA 1990 Evolution of aromatic amino acid biosynthesis and application to the fine-tuned phylogenetic positioning of enteric bacteria J Bacteriol 172 1051 1061
-
(1990)
J Bacteriol
, vol.172
, pp. 1051-1061
-
-
Ahmad S1
Weisburg, W.G.2
Jensen, R.A.3
-
6
-
-
33645473238
-
Bacteriophage SPP1
-
2nd edn*Calendar R. Oxford University Press Oxford, UK ed)
-
Alonso JC Tavares P Lurz R Trautner TA 2005 Bacteriophage SPP1 The Bacteriophages 2nd edn Calendar R ed), pp. 331 349 Oxford University Press Oxford, UK
-
(2005)
The Bacteriophages
, pp. 331-349
-
-
Alonso C, J.1
Tavares, P.2
Lurz, R.3
Trautner, T.A.4
-
7
-
-
0032798540
-
Primary structure and features of the genome of the Lactobacillus gasseri temperate bacteriophage (phi)adh
-
Altermann E Klein JR Henrich B 1999 Primary structure and features of the genome of the Lactobacillus gasseri temperate bacteriophage (phi)adh Gene 236 333 346
-
(1999)
Gene
, vol.236
, pp. 333-346
-
-
Altermann E1
Klein, J.R.2
Henrich, B.3
-
8
-
-
0023046309
-
Synthesis of bacteriophage phi X174 in vitro mechanism of switch from DNA replication to DNA packaging
-
Aoyama A Hayashi M 1986 Synthesis of bacteriophage phi X174 in vitro mechanism of switch from DNA replication to DNA packaging Cell 47 99 106
-
(1986)
Cell
, vol.47
, pp. 99-106
-
-
Aoyama A1
Hayashi, M.2
-
9
-
-
0032515094
-
Bacillus subtilis DnaG primase stabilises the bacteriophage SPP1 G40P helicase-ssDNA complex
-
Ayora S Langer U Alonso JC 1998 Bacillus subtilis DnaG primase stabilises the bacteriophage SPP1 G40P helicase-ssDNA complex FEBS Lett 439 59 62
-
(1998)
FEBS Lett
, vol.439
, pp. 59-62
-
-
Ayora S1
Langer, U.2
Alonso, J.C.3
-
10
-
-
0037184023
-
Homologous-pairing activity of the Bacillus subtilis bacteriophage SPP1 replication protein G35P
-
Ayora S Missich R Mesa P Lurz R Yang S Egelman EH Alonso JC 2002 Homologous-pairing activity of the Bacillus subtilis bacteriophage SPP1 replication protein G35P J Biol Chem 277 35969 35979
-
(2002)
J Biol Chem
, vol.277
, pp. 35969-35979
-
-
Ayora S1
Missich, R.2
Mesa, P.3
Lurz, R.4
Yang, S.5
Egelman, E.H.6
Alonso, J.C.7
-
11
-
-
0036842339
-
The fundamental contribution of phages to GAS evolution, genome diversification and strain emergence
-
Banks DJ Beres SB Musser JM 2002 The fundamental contribution of phages to GAS evolution, genome diversification and strain emergence Trends Microbiol 10 515 521
-
(2002)
Trends Microbiol
, vol.10
, pp. 515-521
-
-
Banks J, D.1
Beres, S.B.2
Musser, J.M.3
-
12
-
-
0037444338
-
Recruitment of terminal protein to the ends of Streptomyces linear plasmids and chromosomes by a novel telomere-binding protein essential for linear DNA replication
-
Bao K Cohen SN 2003 Recruitment of terminal protein to the ends of Streptomyces linear plasmids and chromosomes by a novel telomere-binding protein essential for linear DNA replication Genes Dev 17 774 785
-
(2003)
Genes Dev
, vol.17
, pp. 774-785
-
-
Bao K1
Cohen, S.N.2
-
13
-
-
0035080655
-
Regulation of the switch from early to late bacteriophage lambda DNA replication
-
Baranska S Gabig M Wegrzyn A et al 2001 Regulation of the switch from early to late bacteriophage lambda DNA replication Microbiology 147 535 547
-
(2001)
Microbiology
, vol.147
, pp. 535-547
-
-
Baranska S1
Gabig, M.2
Wegrzyn, A.3
Al, E.4
-
14
-
-
0036493235
-
Directionality of lambda plasmid DNA replication carried out by the heritable replication complex
-
Baranska S Konopa G Wegrzyn G 2002 Directionality of lambda plasmid DNA replication carried out by the heritable replication complex Nucleic Acids Res 30 1176 1181
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1176-1181
-
-
Baranska S1
Konopa, G.2
Wegrzyn, G.3
-
15
-
-
0028589302
-
A role for two DNA helicases in the replication of T4 bacteriophage DNA
-
Barry J Alberts B 1994a A role for two DNA helicases in the replication of T4 bacteriophage DNA J Biol Chem 269 33063 33068
-
(1994)
J Biol Chem
, vol.269
, pp. 33063-33068
-
-
Barry J1
Alberts, B.2
-
16
-
-
0028586099
-
Purification and characterization of bacteriophage T4 gene 59 protein. a DNA helicase assembly protein involved in DNA replication
-
Barry J Alberts B 1994b Purification and characterization of bacteriophage T4 gene 59 protein. A DNA helicase assembly protein involved in DNA replication J Biol Chem 269 33049 33062
-
(1994)
J Biol Chem
, vol.269
, pp. 33049-33062
-
-
Barry J1
Alberts, B.2
-
19
-
-
0033600551
-
Mechanism of DnaB helicase of Escherichia coli structural domains involved in ATP hydrolysis, DNA binding, and oligomerization
-
Biswas EE Biswas SB 1999 Mechanism of DnaB helicase of Escherichia coli structural domains involved in ATP hydrolysis, DNA binding, and oligomerization Biochemistry 38 10919 10928
-
(1999)
Biochemistry
, vol.38
, pp. 10919-10928
-
-
Biswas E, E.1
Biswas, S.B.2
-
20
-
-
0026547349
-
DNA-independent deoxynucleotidylation of the phi 29 terminal protein by the phi 29 DNA polymerase
-
Blanco L Bernad A Esteban JA Salas M 1992 DNA-independent deoxynucleotidylation of the phi 29 terminal protein by the phi 29 DNA polymerase J Biol Chem 267 1225 1230
-
(1992)
J Biol Chem
, vol.267
, pp. 1225-1230
-
-
Blanco L1
Bernad, A.2
Esteban, J.A.3
Salas, M.4
-
21
-
-
1242272002
-
Mutations in a conserved motif inhibit single-stranded DNA binding and recombination mediator activities of bacteriophage T4 UvsY protein
-
Bleuit JS Ma Y Munro J Morrical SW 2004 Mutations in a conserved motif inhibit single-stranded DNA binding and recombination mediator activities of bacteriophage T4 UvsY protein J Biol Chem 279 6077 6086
-
(2004)
J Biol Chem
, vol.279
, pp. 6077-6086
-
-
Bleuit S, J.1
Ma, Y.2
Munro, J.3
Morrical, S.W.4
-
22
-
-
0035089952
-
Phylogeny, genome evolution, and host specificity of single-stranded RNA bacteriophage (family Leviviridae)
-
Bollback JP Huelsenbeck JP 2001 Phylogeny, genome evolution, and host specificity of single-stranded RNA bacteriophage (family Leviviridae) J Mol Evol 52 117 128
-
(2001)
J Mol Evol
, vol.52
, pp. 117-128
-
-
Bollback P, J.1
Huelsenbeck, J.P.2
-
23
-
-
0014966697
-
A recombination function essential to the growth of bacteriophage P22
-
Botstein D Matz MJ 1970 A recombination function essential to the growth of bacteriophage P22 J Mol Biol 54 417 440
-
(1970)
J Mol Biol
, vol.54
, pp. 417-440
-
-
Botstein D1
Matz, M.J.2
-
24
-
-
0017876540
-
The RNA primer synthesized by primase to initiate phage G4 DNA replication
-
Bouché JP Rowen L Kornberg A 1978 The RNA primer synthesized by primase to initiate phage G4 DNA replication J Biol Chem 253 765 769
-
(1978)
J Biol Chem
, vol.253
, pp. 765-769
-
-
Bouché P, J.1
Rowen, L.2
Kornberg, A.3
-
25
-
-
0017286063
-
Multiple origins and circular structures in replicating T5 bacteriophage DNA
-
Bourguignon GJ Sweeney TK Delius H 1976 Multiple origins and circular structures in replicating T5 bacteriophage DNA J Virol 18 245 259
-
(1976)
J Virol
, vol.18
, pp. 245-259
-
-
Bourguignon J, G.1
Sweeney, T.K.2
Delius, H.3
-
26
-
-
0019335627
-
The synthesis of coliphage T1 DNA requirement for host dna genes involved in elongation
-
Bourque LW Christensen JR 1980 The synthesis of coliphage T1 DNA requirement for host dna genes involved in elongation Virology 102 310 316
-
(1980)
Virology
, vol.102
, pp. 310-316
-
-
Bourque W, L.1
Christensen, J.R.2
-
28
-
-
0034388025
-
Biochemistry strikes back
-
Brenner S 2000 Biochemistry strikes back Trends Biochem Sci 25 584
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 584
-
-
Brenner S1
-
29
-
-
0035122990
-
The plasmid status of satellite bacteriophage P4
-
Briani F Dehò G Forti F Ghisotti D 2001 The plasmid status of satellite bacteriophage P4 Plasmid 45 1 17
-
(2001)
Plasmid
, vol.45
, pp. 1-17
-
-
Briani F1
Dehò, G.2
Forti, F.3
Ghisotti, D.4
-
30
-
-
0015852238
-
An electron microscopic analysis of pathways for bacteriophage T4 DNA recombination
-
Broker TR 1973 An electron microscopic analysis of pathways for bacteriophage T4 DNA recombination J Mol Biol 81 1 16
-
(1973)
J Mol Biol
, vol.81
, pp. 1-16
-
-
Broker R, T.1
-
31
-
-
0016625025
-
Molecular and genetic recombination of bacteriophage T4
-
Broker TR Doermann AH 1975 Molecular and genetic recombination of bacteriophage T4 Annu Rev Genet 9 213 244
-
(1975)
Annu Rev Genet
, vol.9
, pp. 213-244
-
-
Broker R, T.1
Doermann, A.H.2
-
32
-
-
0035153828
-
Comparative phage genomics and the evolution of Siphoviridae insights from dairy phages
-
Bruessow H Desiere F 2001 Comparative phage genomics and the evolution of Siphoviridae insights from dairy phages Mol Microbiol 39 213 222
-
(2001)
Mol Microbiol
, vol.39
, pp. 213-222
-
-
Bruessow H1
Desiere, F.2
-
33
-
-
4544321685
-
Phages and the evolution of bacterial pathogens from genomic rearrangements to lysogenic conversion
-
Bruessow H Canchaya C Hardt WD 2004 Phages and the evolution of bacterial pathogens from genomic rearrangements to lysogenic conversion Microbiol Mol Biol Rev 68 560 602
-
(2004)
Microbiol Mol Biol Rev
, vol.68
, pp. 560-602
-
-
Bruessow H1
Canchaya, C.2
Hardt, W.D.3
-
34
-
-
0018069243
-
Specific labelling of replicating SPP1 DNA analysis of viral DNA synthesis and identification of phage DNA-genes
-
Burger KJ Trautner TA 1978 Specific labelling of replicating SPP1 DNA analysis of viral DNA synthesis and identification of phage DNA-genes Mol Gen Genet 166 277 285
-
(1978)
Mol Gen Genet
, vol.166
, pp. 277-285
-
-
Burger J, K.1
Trautner, T.A.2
-
35
-
-
0021989292
-
Purification and properties of the bacteriophage T4 gene 61 RNA priming protein
-
Burke RL Munn M Barry J Alberts BM 1985 Purification and properties of the bacteriophage T4 gene 61 RNA priming protein J Biol Chem 260 1711 1722
-
(1985)
J Biol Chem
, vol.260
, pp. 1711-1722
-
-
Burke L, R.1
Munn, M.2
Barry, J.3
Alberts, B.M.4
-
36
-
-
13444282478
-
PriA helicase and SSB interact physically and functionally
-
Cadman CJ McGlynn P 2004 PriA helicase and SSB interact physically and functionally Nucleic Acids Res 32 6378 6387
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6378-6387
-
-
Cadman J, C.1
McGlynn, P.2
-
37
-
-
84921756839
-
The bacterial chromosome and its manner of replication as seen by autoradiography
-
Cairns J 1963 The bacterial chromosome and its manner of replication as seen by autoradiography J Mol Biol 6 208 213
-
(1963)
J Mol Biol
, vol.6
, pp. 208-213
-
-
Cairns J1
-
38
-
-
0027968034
-
Comparative molecular biology of lambdoid phages
-
Campbell A 1994 Comparative molecular biology of lambdoid phages Annu Rev Microbiol 48 193 222
-
(1994)
Annu Rev Microbiol
, vol.48
, pp. 193-222
-
-
Campbell A1
-
41
-
-
0031567150
-
RNA-DNA hybrid formation at a bacteriophage T4 replication origin
-
Carles-Kinch K Kreuzer KN 1997 RNA-DNA hybrid formation at a bacteriophage T4 replication origin J Mol Biol 266 915 926
-
(1997)
J Mol Biol
, vol.266
, pp. 915-926
-
-
Carles-Kinch K1
Kreuzer, K.N.2
-
42
-
-
0037825641
-
Prophages and bacterial genomics what have we learned so far?
-
Casjens S 2003 Prophages and bacterial genomics what have we learned so far? Mol Microbiol 49 277 300
-
(2003)
Mol Microbiol
, vol.49
, pp. 277-300
-
-
Casjens S1
-
43
-
-
0035876113
-
A broad host range replicon with different requirements for replication initiation in three bacterial species
-
Caspi R Pacek M Consiglieri G Helinski DR Toukdarian A Konieczny I 2001 A broad host range replicon with different requirements for replication initiation in three bacterial species EMBO J 20 3262 3271
-
(2001)
EMBO J
, vol.20
, pp. 3262-3271
-
-
Caspi R1
Pacek, M.2
Consiglieri, G.3
Helinski, D.R.4
Toukdarian, A.5
Konieczny, I.6
-
44
-
-
0026517262
-
Molecular analysis of the Bacillus subtilis bacteriophage SPP1 region encompassing genes 1 to 6. the products of gene 1 and gene 2 are required for pac cleavage
-
Chai S Bravo A Lüder G Nedlin A Trautner TA Alonso JC 1992 Molecular analysis of the Bacillus subtilis bacteriophage SPP1 region encompassing genes 1 to 6. The products of gene 1 and gene 2 are required for pac cleavage J Mol Biol 224 87 102
-
(1992)
J Mol Biol
, vol.224
, pp. 87-102
-
-
Chai S1
Bravo, A.2
Lüder, G.3
Nedlin, A.4
Trautner, T.A.5
Alonso, J.C.6
-
46
-
-
0034714241
-
Identification of a region of Escherichia coli DnaB required for functional interaction with DnaG at the replication fork
-
Chang P Marians KJ 2000 Identification of a region of Escherichia coli DnaB required for functional interaction with DnaG at the replication fork J Biol Chem 275 26187 26195
-
(2000)
J Biol Chem
, vol.275
, pp. 26187-26195
-
-
Chang P1
Marians, K.J.2
-
47
-
-
0029847583
-
Streptomyces linear plasmids that contain a phage-like, centrally located, replication origin
-
Chang PC Kim ES Cohen SN 1996 Streptomyces linear plasmids that contain a phage-like, centrally located, replication origin Mol Microbiol 22 789 800
-
(1996)
Mol Microbiol
, vol.22
, pp. 789-800
-
-
Chang C, P.1
Kim, E.S.2
Cohen, S.N.3
-
48
-
-
0026054936
-
DNA-induced dimerization of the Escherichia coli Rep helicase
-
Chao KL Lohman TM 1991 DNA-induced dimerization of the Escherichia coli Rep helicase J Mol Biol 221 1165 1181
-
(1991)
J Mol Biol
, vol.221
, pp. 1165-1181
-
-
Chao L, K.1
Lohman, T.M.2
-
49
-
-
2542473234
-
Replicable and recombinogenic RNAs
-
Chetverin AB 2004 Replicable and recombinogenic RNAs FEBS Lett 567 35 41
-
(2004)
FEBS Lett
, vol.567
, pp. 35-41
-
-
Chetverin B, A.1
-
50
-
-
0035253405
-
Analysis of six prophages in Lactococcus lactis IL1403 different genetic structure of temperate and virulent phage populations
-
Chopin A Bolotin A Sorokin A Ehrlich SD Chopin M 2001 Analysis of six prophages in Lactococcus lactis IL1403 different genetic structure of temperate and virulent phage populations Nucleic Acids Res 29 644 651
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 644-651
-
-
Chopin A1
Bolotin, A.2
Sorokin, A.3
Ehrlich, S.D.4
Chopin, M.5
-
51
-
-
0025602625
-
Bacteriophage T7 DNA packaging. I. Plasmids containing a T7 replication origin and the T7 concatemer junction are packaged into transducing particles during phage infection
-
Chung YB Hinkle DC 1990 Bacteriophage T7 DNA packaging. I. Plasmids containing a T7 replication origin and the T7 concatemer junction are packaged into transducing particles during phage infection J Mol Biol 216 911 926
-
(1990)
J Mol Biol
, vol.216
, pp. 911-926
-
-
Chung B, Y.1
Hinkle, D.C.2
-
52
-
-
0005292858
-
Cosmids a type of plasmid gene-cloning vector that is packageable in vitro in bacteriophage lambda heads
-
Collins J Hohn B 1978 Cosmids a type of plasmid gene-cloning vector that is packageable in vitro in bacteriophage lambda heads Proc Natl Acad Sci USA 75 4242 4246
-
(1978)
Proc Natl Acad Sci USA
, vol.75
, pp. 4242-4246
-
-
Collins J1
Hohn, B.2
-
53
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet F 1988 Multiple sequence alignment with hierarchical clustering Nucleic Acids Res 16 10881 10890
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 10881-10890
-
-
Corpet F1
-
54
-
-
0035902587
-
Historical overview searching for replication help in all of the rec places
-
Cox MM 2001 Historical overview searching for replication help in all of the rec places Proc Natl Acad Sci USA 98 8173 8180
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8173-8180
-
-
Cox M, M.1
-
57
-
-
0020684649
-
Early intermediates in bacteriophage T4 DNA replication and recombination
-
Dannenberg R Mosig G 1983 Early intermediates in bacteriophage T4 DNA replication and recombination J Virol 45 813 831
-
(1983)
J Virol
, vol.45
, pp. 813-831
-
-
Dannenberg R1
Mosig, G.2
-
58
-
-
0033524411
-
Mechanism of recruitment of DnaB helicase to the replication origin of the plasmid pSC101
-
Datta HJ Khatri GS Bastia D 1999 Mechanism of recruitment of DnaB helicase to the replication origin of the plasmid pSC101 Proc Natl Acad Sci USA 96 73 78
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 73-78
-
-
Datta J, H.1
Khatri, G.S.2
Bastia, D.3
-
59
-
-
0037325258
-
Filamentous phages linked to virulence of Vibrio cholerae
-
Davis BM Waldor MK 2003 Filamentous phages linked to virulence of Vibrio cholerae Curr Opin Microbiol 6 35 42
-
(2003)
Curr Opin Microbiol
, vol.6
, pp. 35-42
-
-
Davis M, B.1
Waldor, M.K.2
-
60
-
-
0026447152
-
A stable Escherichia coli-Mycobacterium smegmatis plasmid shuttle vector containing the mycobacteriophage D29 origin
-
David M Lubinsky-Mink S Ben Zvi A Ulitzur S Kuhn J Suissa M 1992 A stable Escherichia coli-Mycobacterium smegmatis plasmid shuttle vector containing the mycobacteriophage D29 origin Plasmid 28 267 271
-
(1992)
Plasmid
, vol.28
, pp. 267-271
-
-
David M1
Lubinsky-Mink, S.2
Ben Zvi, A.3
Ulitzur, S.4
Kuhn, J.5
Suissa, M.6
-
61
-
-
0034608949
-
The protelomerase of temperate Escherichia coli phage N15 has cleaving-joining activity
-
Deneke J Ziegelin G Lurz R Lanka E 2000 The protelomerase of temperate Escherichia coli phage N15 has cleaving-joining activity Proc Natl Acad Sci USA 97 7721 7726
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 7721-7726
-
-
Deneke J1
Ziegelin, G.2
Lurz, R.3
Lanka, E.4
-
62
-
-
0037155871
-
Phage N15 telomere resolution. Target requirements for recognition and processing by the protelomerase
-
Deneke J Ziegelin G Lurz R Lanka E 2002 Phage N15 telomere resolution. Target requirements for recognition and processing by the protelomerase J Biol Chem 277 10410 10419
-
(2002)
J Biol Chem
, vol.277
, pp. 10410-10419
-
-
Deneke J1
Ziegelin, G.2
Lurz, R.3
Lanka, E.4
-
63
-
-
11144237450
-
Catalytic residues of the telomere resolvase ResT a pattern similar to, but distinct from, tyrosine recombinases and type IB topoisomerases
-
Deneke J Burgin AB Wilson SL Chaconas G 2004 Catalytic residues of the telomere resolvase ResT a pattern similar to, but distinct from, tyrosine recombinases and type IB topoisomerases J Biol Chem 279 53699 53706
-
(2004)
J Biol Chem
, vol.279
, pp. 53699-53706
-
-
Deneke J1
Burgin, A.B.2
Wilson, S.L.3
Chaconas, G.4
-
64
-
-
0018116982
-
Cloning of replication origins from the E. coli K12 chromosome
-
Díaz R Pritchard RH 1978 Cloning of replication origins from the E. coli K12 chromosome Nature 275 561 564
-
(1978)
Nature
, vol.275
, pp. 561-564
-
-
Díaz R1
Pritchard, R.H.2
-
65
-
-
0023038675
-
Specialized nucleoprotein structures at the origin of replication of bacteriophage lambda localized unwinding of duplex DNA by a six-protein reaction
-
Dodson M Echols H Wickner S et al 1986 Specialized nucleoprotein structures at the origin of replication of bacteriophage lambda localized unwinding of duplex DNA by a six-protein reaction Proc Natl Acad Sci USA 83 7638 7642
-
(1986)
Proc Natl Acad Sci USA
, vol.83
, pp. 7638-7642
-
-
Dodson M1
Echols, H.2
Wickner, S.3
Al, E.4
-
66
-
-
0034995683
-
Co-ordinate regulation of the Escherichia coli cell cycle or the cloud of unknowing
-
Donachie WD 2001 Co-ordinate regulation of the Escherichia coli cell cycle or The cloud of unknowing Mol Microbiol 40 779 785
-
(2001)
Mol Microbiol
, vol.40
, pp. 779-785
-
-
Donachie D, W.1
-
67
-
-
0021329693
-
The functional origin of bacteriophage f1 DNA replication. Its signals and domains
-
Dotto GP Horiuchi K Zinder ND 1984 The functional origin of bacteriophage f1 DNA replication. Its signals and domains J Mol Biol 172 507 521
-
(1984)
J Mol Biol
, vol.172
, pp. 507-521
-
-
Dotto P, G.1
Horiuchi, K.2
Zinder, N.D.3
-
69
-
-
0015329983
-
Initiation and reinitiation of DNA synthesis during replication of bacteriophage T7
-
Dressler D Wolfson J Magazin M 1972 Initiation and reinitiation of DNA synthesis during replication of bacteriophage T7 Proc Natl Acad Sci USA 69 998 1002
-
(1972)
Proc Natl Acad Sci USA
, vol.69
, pp. 998-1002
-
-
Dressler D1
Wolfson, J.2
Magazin, M.3
-
70
-
-
0028006543
-
Hypernegative supercoiling of the DNA template during transcription elongation in vitro
-
Drolet M Bi X Liu LF 1994 Hypernegative supercoiling of the DNA template during transcription elongation in vitro J Biol Chem 269 2068 2074
-
(1994)
J Biol Chem
, vol.269
, pp. 2068-2074
-
-
Drolet M1
Bi, X.2
Liu, L.F.3
-
71
-
-
10744220624
-
The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens
-
Duchaud E Rusniok C Frangeul L et al 2003 The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens Nat Biotechnol 21 1307 1313
-
(2003)
Nat Biotechnol
, vol.21
, pp. 1307-1313
-
-
Duchaud E1
Rusniok, C.2
Frangeul, L.3
Al, E.4
-
72
-
-
0035076633
-
UvsW protein regulates bacteriophage T4 origin-dependent replication by unwinding R-loops
-
Dudas KC Kreuzer KN 2001 UvsW protein regulates bacteriophage T4 origin-dependent replication by unwinding R-loops Mol Cell Biol 21 2706 2715
-
(2001)
Mol Cell Biol
, vol.21
, pp. 2706-2715
-
-
Dudas C, K.1
Kreuzer, K.N.2
-
73
-
-
0031587829
-
Archaea and the origin(s) of DNA replication proteins
-
Edgell DR Doolittle WF 1997 Archaea and the origin(s) of DNA replication proteins Cell 89 995 998
-
(1997)
Cell
, vol.89
, pp. 995-998
-
-
Edgell R, D.1
Doolittle, W.F.2
-
74
-
-
3142695077
-
Untangling intracellular DNA topology
-
Espeli O Marians KJ 2004 Untangling intracellular DNA topology Mol Microbiol 52 925 931
-
(2004)
Mol Microbiol
, vol.52
, pp. 925-931
-
-
Espeli O1
Marians, K.J.2
-
76
-
-
0022429775
-
Processive action of terminase during sequential packaging of bacteriophage lambda chromosomes
-
Feiss M Sippy J Miller G 1985 Processive action of terminase during sequential packaging of bacteriophage lambda chromosomes J Mol Biol 186 759 771
-
(1985)
J Mol Biol
, vol.186
, pp. 759-771
-
-
Feiss M1
Sippy, J.2
Miller, G.3
-
77
-
-
0030933301
-
A permeabilized cell system that assembles filamentous bacteriophage
-
Feng JN Russel M Model P 1997 A permeabilized cell system that assembles filamentous bacteriophage Proc Natl Acad Sci USA 94 4068 4073
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 4068-4073
-
-
Feng N, J.1
Russel, M.2
Model, P.3
-
79
-
-
0032566919
-
A short noncoding viral DNA element showing characteristics of a replication origin confers bacteriophage resistance to Streptococcus thermophilus
-
Foley S Lucchini S Zwahlen MC Bruessow H 1998 A short noncoding viral DNA element showing characteristics of a replication origin confers bacteriophage resistance to Streptococcus thermophilus Virology 250 377 387
-
(1998)
Virology
, vol.250
, pp. 377-387
-
-
Foley S1
Lucchini, S.2
Zwahlen, M.C.3
Bruessow, H.4
-
80
-
-
0022902536
-
DNA synthesis dependent on genetic recombination characterization of a reaction catalyzed by purified bacteriophage T4 proteins
-
Formosa T Alberts BM 1986 DNA synthesis dependent on genetic recombination characterization of a reaction catalyzed by purified bacteriophage T4 proteins Cell 47 793 806
-
(1986)
Cell
, vol.47
, pp. 793-806
-
-
Formosa T1
Alberts, B.M.2
-
81
-
-
0032810166
-
Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins
-
Forterre P 1999 Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins Mol Microbiol 33 457 465
-
(1999)
Mol Microbiol
, vol.33
, pp. 457-465
-
-
Forterre P1
-
82
-
-
0029852327
-
Activation of replication origins in phi29-related phages requires the recognition of initiation proteins to specific nucleoprotein complexes
-
Freire R Serrano M Salas M Hermoso JM 1996 Activation of replication origins in phi29-related phages requires the recognition of initiation proteins to specific nucleoprotein complexes J Biol Chem 271 31000 31007
-
(1996)
J Biol Chem
, vol.271
, pp. 31000-31007
-
-
Freire R1
Serrano, M.2
Salas, M.3
Hermoso, J.M.4
-
83
-
-
0019419366
-
Lambda altSF a phage variant that acquired the ability to substitute specific sets of genes at high frequency
-
Friedman D Tomich P Parsons C Olson E Deans R Flamm E 1981 lambda altSF a phage variant that acquired the ability to substitute specific sets of genes at high frequency Proc Natl Acad Sci USA 78 410 414
-
(1981)
Proc Natl Acad Sci USA
, vol.78
, pp. 410-414
-
-
Friedman D1
Tomich, P.2
Parsons, C.3
Olson, E.4
Deans, R.5
Flamm, E.6
-
85
-
-
0020541313
-
Interaction of a DNA-binding protein, the product of gene D5 of bacteriophage T5, with double-stranded DNA effects on T5 DNA polymerase functions in vitro
-
Fujimura RK Roop BC 1983 Interaction of a DNA-binding protein, the product of gene D5 of bacteriophage T5, with double-stranded DNA effects on T5 DNA polymerase functions in vitro J Virol 46 778 787
-
(1983)
J Virol
, vol.46
, pp. 778-787
-
-
Fujimura K, R.1
Roop, B.C.2
-
86
-
-
0021986405
-
Initiation of DNA replication at the primary origin of bacteriophage T7 by purified proteins. Initiation of bidirectional synthesis
-
Fuller CW Richardson CC 1985a Initiation of DNA replication at the primary origin of bacteriophage T7 by purified proteins. Initiation of bidirectional synthesis J Biol Chem 260 3197 3206
-
(1985)
J Biol Chem
, vol.260
, pp. 3197-3206
-
-
Fuller W, C.1
Richardson, C.C.2
-
87
-
-
0021957277
-
Initiation of DNA replication at the primary origin of bacteriophage T7 by purified proteins. Site and direction of initial DNA synthesis
-
Fuller CW Richardson CC 1985b Initiation of DNA replication at the primary origin of bacteriophage T7 by purified proteins. Site and direction of initial DNA synthesis J Biol Chem 260 3185 3196
-
(1985)
J Biol Chem
, vol.260
, pp. 3185-3196
-
-
Fuller W, C.1
Richardson, C.C.2
-
89
-
-
0021720088
-
The dnaA protein complex with the E. coli chromosomal origin (oriC) and other sites
-
Fuller RS Funnell BE Kornberg A 1984 The dnaA protein complex with the E. coli chromosomal origin (oriC) and other sites Cell 38 889 900
-
(1984)
Cell
, vol.38
, pp. 889-900
-
-
Fuller S, R.1
Funnell, B.E.2
Kornberg, A.3
-
90
-
-
0035902549
-
The tight linkage between DNA replication and double-strand break repair in bacteriophage T4
-
George JW Stohr BA Tomso DJ Kreuzer KN 2001 The tight linkage between DNA replication and double-strand break repair in bacteriophage T4 Proc Natl Acad Sci USA 98 8290 8297
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8290-8297
-
-
George W, J.1
Stohr, B.A.2
Tomso, D.J.3
Kreuzer, K.N.4
-
92
-
-
0037271207
-
Common domains in the initiators of DNA replication in Bacteria, Archaea and Eukarya combined structural, functional and phylogenetic perspectives
-
Giraldo R 2003 Common domains in the initiators of DNA replication in Bacteria, Archaea and Eukarya combined structural, functional and phylogenetic perspectives FEMS Microbiol Rev 26 533 554
-
(2003)
FEMS Microbiol Rev
, vol.26
, pp. 533-554
-
-
Giraldo R1
-
93
-
-
4344661025
-
Twenty years of the pPS10 replicon insights on the molecular mechanism for the activation of DNA replication in iteron-containing bacterial plasmids
-
Giraldo R Fernandez-Tresguerres ME 2004 Twenty years of the pPS10 replicon insights on the molecular mechanism for the activation of DNA replication in iteron-containing bacterial plasmids Plasmid 52 69 83
-
(2004)
Plasmid
, vol.52
, pp. 69-83
-
-
Giraldo R1
Fernandez-Tresguerres, M.E.2
-
95
-
-
0038011248
-
Replication restart in gyrB Escherichia coli mutants
-
Grompone G Ehrlich SD Michel B 2003 Replication restart in gyrB Escherichia coli mutants Mol Microbiol 48 845 854
-
(2003)
Mol Microbiol
, vol.48
, pp. 845-854
-
-
Grompone G1
Ehrlich, S.D.2
Michel, B.3
-
96
-
-
0033428970
-
Helicase motifs the engine that powers DNA unwinding
-
Hall MC Matson SW 1999 Helicase motifs the engine that powers DNA unwinding Mol Microbiol 34 867 877
-
(1999)
Mol Microbiol
, vol.34
, pp. 867-877
-
-
Hall C, M.1
Matson, S.W.2
-
97
-
-
0024633533
-
Transcription of a region downstream from lambda ori is required for replication of plasmids derived from coliphage lambda
-
Hase T Nakai M Masamune Y 1989 Transcription of a region downstream from lambda ori is required for replication of plasmids derived from coliphage lambda Mol Gen Genet 216 120 125
-
(1989)
Mol Gen Genet
, vol.216
, pp. 120-125
-
-
Hase T1
Nakai, M.2
Masamune, Y.3
-
98
-
-
0031725252
-
A family of stability determinants in pathogenic bacteria
-
Hayes F 1998 A family of stability determinants in pathogenic bacteria J Bacteriol 180 6415 6418
-
(1998)
J Bacteriol
, vol.180
, pp. 6415-6418
-
-
Hayes F1
-
99
-
-
14644415982
-
The disposition of nascent strands at stalled replication forks dictates the pathway of replisome loading during restart
-
Heller RC Marians KJ 2005 The disposition of nascent strands at stalled replication forks dictates the pathway of replisome loading during restart Mol Cell 17 733 743
-
(2005)
Mol Cell
, vol.17
, pp. 733-743
-
-
Heller C, R.1
Marians, K.J.2
-
101
-
-
0034970999
-
A plasmid cloning vector with precisely regulatable copy number in Escherichia coli
-
Herman-Antosiewicz A Obuchowski M Wegrzyn G 2001 A plasmid cloning vector with precisely regulatable copy number in Escherichia coli Mol Biotechnol 17 193 199
-
(2001)
Mol Biotechnol
, vol.17
, pp. 193-199
-
-
Herman-Antosiewicz A1
Obuchowski, M.2
Wegrzyn, G.3
-
102
-
-
0022423690
-
Location of the serine residue involved in the linkage between the terminal protein and the DNA of phage phi 29
-
Hermoso JM Mendez E Soriano F Salas M 1985 Location of the serine residue involved in the linkage between the terminal protein and the DNA of phage phi 29 Nucleic Acids Res 13 7715 7728
-
(1985)
Nucleic Acids Res
, vol.13
, pp. 7715-7728
-
-
Hermoso M, J.1
Mendez, E.2
Soriano, F.3
Salas, M.4
-
103
-
-
0033578777
-
Initiation of bidirectional replication at the chromosomal origin is directed by the interaction between helicase and primase
-
Hiasa H Marians KJ 1999 Initiation of bidirectional replication at the chromosomal origin is directed by the interaction between helicase and primase J Biol Chem 274 27244 27248
-
(1999)
J Biol Chem
, vol.274
, pp. 27244-27248
-
-
Hiasa H1
Marians, K.J.2
-
104
-
-
0024806757
-
Mutational analysis of the primer RNA template region in the replication origin (oric) of bacteriophage G4 priming signal recognition by Escherichia coli primase
-
Hiasa H Sakai H Tanaka K Honda Y Komano T Godson GN 1989 Mutational analysis of the primer RNA template region in the replication origin (oric) of bacteriophage G4 priming signal recognition by Escherichia coli primase Gene 84 9 16
-
(1989)
Gene
, vol.84
, pp. 9-16
-
-
Hiasa H1
Sakai, H.2
Tanaka, K.3
Honda, Y.4
Komano, T.5
Godson, G.N.6
-
105
-
-
0027411071
-
Nucleotide sequence of the primer RNA for DNA replication of filamentous bacteriophages
-
Higashitani N Higashitani A Horiuchi K 1993 Nucleotide sequence of the primer RNA for DNA replication of filamentous bacteriophages J Virol 67 2175 2181
-
(1993)
J Virol
, vol.67
, pp. 2175-2181
-
-
Higashitani N1
Higashitani, A.2
Horiuchi, K.3
-
106
-
-
0028364238
-
Multiple DNA conformational changes induced by an initiator protein precede the nicking reaction in a rolling circle replication origin
-
Higashitani A Greenstein D Hirokawa H Asano S Horiuchi K 1994 Multiple DNA conformational changes induced by an initiator protein precede the nicking reaction in a rolling circle replication origin J Mol Biol 237 388 400
-
(1994)
J Mol Biol
, vol.237
, pp. 388-400
-
-
Higashitani A1
Greenstein, D.2
Hirokawa, H.3
Asano, S.4
Horiuchi, K.5
-
107
-
-
0025179728
-
Evidence for the exchange of segments between genomes during the evolution of lambdoid bacteriophages
-
Highton PJ Chang Y Myers RJ 1990 Evidence for the exchange of segments between genomes during the evolution of lambdoid bacteriophages Mol Microbiol 4 1329 1340
-
(1990)
Mol Microbiol
, vol.4
, pp. 1329-1340
-
-
Highton J, P.1
Chang, Y.2
Myers, R.J.3
-
108
-
-
0031179977
-
Initiation mechanisms in replication of filamentous phage DNA
-
Horiuchi K 1997 Initiation mechanisms in replication of filamentous phage DNA Genes Cells 2 425 432
-
(1997)
Genes Cells
, vol.2
, pp. 425-432
-
-
Horiuchi K1
-
109
-
-
0018307188
-
'Nick translation' in Escherichia coli rep strains deficient in DNA polymerase I activities
-
Hours C Denhardt DT 1979 'Nick translation' in Escherichia coli rep strains deficient in DNA polymerase I activities Mol Gen Genet 172 73 80
-
(1979)
Mol Gen Genet
, vol.172
, pp. 73-80
-
-
Hours C1
Denhardt, D.T.2
-
110
-
-
3042517502
-
Telomere exchange between linear replicons of Borrelia burgdorferi
-
Huang WM Robertson M Aron J Casjens S 2004 Telomere exchange between linear replicons of Borrelia burgdorferi J Bacteriol 186 4134 4141
-
(2004)
J Bacteriol
, vol.186
, pp. 4134-4141
-
-
Huang M, W.1
Robertson, M.2
Aron, J.3
Casjens, S.4
-
111
-
-
0036572959
-
Comparative analysis of the genomes of the temperate bacteriophages phi 11, phi 12 and phi 13 of Staphylococcus aureus 8325
-
Iandolo JJ Worrell V Groicher KH et al 2002 Comparative analysis of the genomes of the temperate bacteriophages phi 11, phi 12 and phi 13 of Staphylococcus aureus 8325 Gene 289 109 118
-
(2002)
Gene
, vol.289
, pp. 109-118
-
-
Iandolo J, J.1
Worrell, V.2
Groicher, K.H.3
Al, E.4
-
112
-
-
0026704305
-
Organization and evolution of bacterial and bacteriophage primase-helicase systems
-
Ilyina TV Gorbalenya AE Koonin EV 1992 Organization and evolution of bacterial and bacteriophage primase-helicase systems J Mol Evol 34 351 357
-
(1992)
J Mol Evol
, vol.34
, pp. 351-357
-
-
Ilyina V, T.1
Gorbalenya, A.E.2
Koonin, E.V.3
-
113
-
-
0035816713
-
Identification and mapping of protein-protein interactions between gp32 and gp59 by cross-linking
-
Ishmael FT Alley SC Benkovic SJ 2001 Identification and mapping of protein-protein interactions between gp32 and gp59 by cross-linking J Biol Chem 276 25236 25242
-
(2001)
J Biol Chem
, vol.276
, pp. 25236-25242
-
-
Ishmael T, F.1
Alley, S.C.2
Benkovic, S.J.3
-
116
-
-
0041806647
-
A multifunctional plasmid-encoded replication initiation protein both recruits and positions an active helicase at the replication origin
-
Jiang Y Pacek M Helinski DR Konieczny I Toukdarian A 2003 A multifunctional plasmid-encoded replication initiation protein both recruits and positions an active helicase at the replication origin Proc Natl Acad Sci USA 100 8692 8697
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 8692-8697
-
-
Jiang Y1
Pacek, M.2
Helinski, D.R.3
Konieczny, I.4
Toukdarian, A.5
-
117
-
-
0033546121
-
Duplex opening by primosome protein PriA for replisome assembly on a recombination intermediate
-
Jones JM Nakai H 1999 Duplex opening by primosome protein PriA for replisome assembly on a recombination intermediate J Mol Biol 289 503 516
-
(1999)
J Mol Biol
, vol.289
, pp. 503-516
-
-
Jones M, J.1
Nakai, H.2
-
118
-
-
0034282426
-
Interaction of the bacteriophage T4 gene 59 helicase loading protein and gene 41 helicase with each other and with fork, flap, and cruciform DNA
-
Jones CE Mueser TC Nossal NG 2000 Interaction of the bacteriophage T4 gene 59 helicase loading protein and gene 41 helicase with each other and with fork, flap, and cruciform DNA J Biol Chem 275 27145 27154
-
(2000)
J Biol Chem
, vol.275
, pp. 27145-27154
-
-
Jones E, C.1
Mueser, T.C.2
Nossal, N.G.3
-
119
-
-
0035800866
-
Conditional coupling of leading-strand and lagging-strand DNA synthesis at bacteriophage T4 replication forks
-
Kadyrov FA Drake JW 2001 Conditional coupling of leading-strand and lagging-strand DNA synthesis at bacteriophage T4 replication forks J Biol Chem 276 29559 29566
-
(2001)
J Biol Chem
, vol.276
, pp. 29559-29566
-
-
Kadyrov A, F.1
Drake, J.W.2
-
120
-
-
0020490610
-
The rho subunit of RNA polymerase holoenzyme confers specificity in priming M13 viral DNA replication
-
Kaguni JM Kornberg A 1982 The rho subunit of RNA polymerase holoenzyme confers specificity in priming M13 viral DNA replication J Biol Chem 257 5437 5443
-
(1982)
J Biol Chem
, vol.257
, pp. 5437-5443
-
-
Kaguni M, J.1
Kornberg, A.2
-
121
-
-
0021751199
-
Replication initiated at the origin (oriC) of the E. coli chromosome reconstituted with purified enzymes
-
Kaguni JM Kornberg A 1984 Replication initiated at the origin (oriC) of the E. coli chromosome reconstituted with purified enzymes Cell 38 183 190
-
(1984)
Cell
, vol.38
, pp. 183-190
-
-
Kaguni M, J.1
Kornberg, A.2
-
122
-
-
0019965978
-
Enzymatic replication of E. coli chromosomal origin is bidirectional
-
Kaguni JM Fuller RS Kornberg A 1982 Enzymatic replication of E. coli chromosomal origin is bidirectional Nature 296 623 627
-
(1982)
Nature
, vol.296
, pp. 623-627
-
-
Kaguni M, J.1
Fuller, R.S.2
Kornberg, A.3
-
123
-
-
0018721473
-
Physical characterisation of the 'Rac prophage' in E. coli K12
-
Kaiser K Murray NE 1979 Physical characterisation of the 'Rac prophage' in E. coli K12 Mol Gen Genet 175 159 174
-
(1979)
Mol Gen Genet
, vol.175
, pp. 159-174
-
-
Kaiser K1
Murray, N.E.2
-
124
-
-
0036753338
-
DnaB drives DNA branch migration and dislodges proteins while encircling two DNA strands
-
Kaplan DL O'Donnell M 2002 DnaB drives DNA branch migration and dislodges proteins while encircling two DNA strands Mol Cell 10 647 657
-
(2002)
Mol Cell
, vol.10
, pp. 647-657
-
-
Kaplan L, D.1
O'Donnell, M.2
-
125
-
-
0034945190
-
Feedback controls restrain the initiation of Escherichia coli chromosomal replication
-
Katayama T 2001 Feedback controls restrain the initiation of Escherichia coli chromosomal replication Mol Microbiol 41 9 17
-
(2001)
Mol Microbiol
, vol.41
, pp. 9-17
-
-
Katayama T1
-
126
-
-
0029956870
-
The localized melting of mini-F by the combined action of the mini-F initiator protein (RepE) and HU and DnaA of Escherichia coli
-
Kawasaki Y Matsunaga F Kano Y Yura T Wada C 1996 The localized melting of mini-F by the combined action of the mini-F initiator protein (RepE) and HU and DnaA of Escherichia coli Mol Gen Genet 253 42 49
-
(1996)
Mol Gen Genet
, vol.253
, pp. 42-49
-
-
Kawasaki Y1
Matsunaga, F.2
Kano, Y.3
Yura, T.4
Wada, C.5
-
127
-
-
0031440479
-
Rolling-circle replication of bacterial plasmids
-
Khan SA 1997 Rolling-circle replication of bacterial plasmids Microbiol Mol Biol Rev 61 442 455
-
(1997)
Microbiol Mol Biol Rev
, vol.61
, pp. 442-455
-
-
Khan A, S.1
-
128
-
-
0033868154
-
Plasmid rolling-circle replication recent developments
-
Khan SA 2000 Plasmid rolling-circle replication recent developments Mol Microbiol 37 477 484
-
(2000)
Mol Microbiol
, vol.37
, pp. 477-484
-
-
Khan A, S.1
-
129
-
-
0031039129
-
Genome structure of the Lactobacillus temperate phage phi g1e the whole genome sequence and the putative promoter/repressor system
-
Kodaira KI Oki M Kakikawa M Watanabe N Hirakawa M Yamada K Taketo A 1997 Genome structure of the Lactobacillus temperate phage phi g1e the whole genome sequence and the putative promoter/repressor system Gene 187 45 53
-
(1997)
Gene
, vol.187
, pp. 45-53
-
-
Kodaira I, K.1
Oki, M.2
Kakikawa, M.3
Watanabe, N.4
Hirakawa, M.5
Yamada, K.6
Taketo, A.7
-
130
-
-
0030737725
-
Stable DNA replication interplay between DNA replication, homologous recombination, and transcription
-
Kogoma T 1997 Stable DNA replication interplay between DNA replication, homologous recombination, and transcription Microbiol Mol Biol Rev 61 212 238
-
(1997)
Microbiol Mol Biol Rev
, vol.61
, pp. 212-238
-
-
Kogoma T1
-
131
-
-
0016749685
-
Characterization of the replication of Escherichia coli DNA in the absence of protein synthesis stable DNA replication
-
Kogoma T Lark KG 1975 Characterization of the replication of Escherichia coli DNA in the absence of protein synthesis stable DNA replication J Mol Biol 94 243 256
-
(1975)
J Mol Biol
, vol.94
, pp. 243-256
-
-
Kogoma T1
Lark, K.G.2
-
132
-
-
0027253636
-
Requirement of homologous recombination functions for viability of the Escherichia coli cell that lacks RNase H and exonuclease V activities
-
Kogoma T Hong X Cadwell GW Barbard KG Asai T 1993 Requirement of homologous recombination functions for viability of the Escherichia coli cell that lacks RNase H and exonuclease V activities Biochimie 75 89 99
-
(1993)
Biochimie
, vol.75
, pp. 89-99
-
-
Kogoma T1
Hong, X.2
Cadwell, G.W.3
Barbard, K.G.4
Asai, T.5
-
133
-
-
0013902812
-
Mutants thermosensibles d'E. coli K-12. I. Isolement et characterisation rapide
-
Kohiyama M Cousin D Ryter A Jacob F 1966 Mutants thermosensibles d'E. coli K-12. I. Isolement et characterisation rapide Ann Inst Pasteur 110 465 486
-
(1966)
Ann Inst Pasteur
, vol.110
, pp. 465-486
-
-
Kohiyama M1
Cousin, D.2
Ryter, A.3
Jacob, F.4
-
134
-
-
0037222240
-
Strategies for helicase recruitment and loading in bacteria
-
Konieczny I 2003 Strategies for helicase recruitment and loading in bacteria EMBO Rep 4 37 41
-
(2003)
EMBO Rep
, vol.4
, pp. 37-41
-
-
Konieczny, I.1
-
135
-
-
0030792096
-
Role of TrfA and DnaA proteins in origin opening during initiation of DNA replication of the broad host range plasmid RK2
-
Konieczny I Doran KS Helinski DR Blasina A 1997 Role of TrfA and DnaA proteins in origin opening during initiation of DNA replication of the broad host range plasmid RK2 J Biol Chem 272 20173 20178
-
(1997)
J Biol Chem
, vol.272
, pp. 20173-20178
-
-
Konieczny, I.1
Doran, K.S.2
Helinski, D.R.3
Blasina, A.4
-
137
-
-
0031911760
-
Comparisons between the structures of HCV and Rep helicases reveal structural similarities between SF1 and SF2 super-families of helicases
-
Korolev S Yao N Lohman TM Weber PC Waksman G 1998 Comparisons between the structures of HCV and Rep helicases reveal structural similarities between SF1 and SF2 super-families of helicases Protein Sci 7 605 610
-
(1998)
Protein Sci
, vol.7
, pp. 605-610
-
-
Korolev S1
Yao, N.2
Lohman, T.M.3
Weber, P.C.4
Waksman, G.5
-
138
-
-
0031555485
-
Complexes at the replication origin of Bacillus subtilis with homologous and heterologous DnaA protein
-
Krause M Lurz R Rückert B Messer W 1997 Complexes at the replication origin of Bacillus subtilis with homologous and heterologous DnaA protein J Mol Biol 274 365 380
-
(1997)
J Mol Biol
, vol.274
, pp. 365-380
-
-
Krause M1
Lurz, R.2
Rückert, B.3
Messer, W.4
-
139
-
-
0032715175
-
Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda
-
Kuzminov A 1999 Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda Microbiol Mol Biol Rev 63 751 813
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 751-813
-
-
Kuzminov A1
-
140
-
-
0242582359
-
Two novel conserved motifs in the hepatitis C virus NS3 protein critical for helicase action
-
Lam AMI Keeney D Frick DN 2003 Two novel conserved motifs in the hepatitis C virus NS3 protein critical for helicase action J Biol Chem 278 44514 44524
-
(2003)
J Biol Chem
, vol.278
, pp. 44514-44524
-
-
Lam I, A.M.1
Keeney, D.2
Frick, D.N.3
-
141
-
-
0032482924
-
Molecular archaeology of the Escherichia coli genome
-
Lawrence JG Ochman H 1998 Molecular archaeology of the Escherichia coli genome Proc Natl Acad Sci USA 95 9413 9417
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 9413-9417
-
-
Lawrence G, J.1
Ochman, H.2
-
142
-
-
0018733089
-
Gene 2 protein of bacteriophage T7 purification and requirement for packaging of T7 DNA in vitro
-
LeClerc JE Richardson CC 1979 Gene 2 protein of bacteriophage T7 purification and requirement for packaging of T7 DNA in vitro Proc Natl Acad Sci USA 76 4852 4856
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 4852-4856
-
-
LeClerc E, J.1
Richardson, C.C.2
-
144
-
-
0242349127
-
Bacteriophage P1 Ban protein is a hexameric DNA helicase that interacts with and substitutes for Escherichia coli DnaB
-
Lemonnier M Ziegelin G Reick T Gomez AM Diaz Orejas R Lanka E 2003 Bacteriophage P1 Ban protein is a hexameric DNA helicase that interacts with and substitutes for Escherichia coli DnaB Nucleic Acids Res 31 3918 3928
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3918-3928
-
-
Lemonnier M1
Ziegelin, G.2
Reick, T.3
Gomez, A.M.4
Diaz Orejas, R.5
Lanka, E.6
-
146
-
-
0028641156
-
Studies of bacteriophage P2 DNA replication localization of the cleavage site of the a protein
-
Liu Y Haggård-Liungquist E 1994 Studies of bacteriophage P2 DNA replication localization of the cleavage site of the A protein Nucleic Acids Res 22 5204 5210
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 5204-5210
-
-
Liu Y1
Haggård-Liungquist, E.2
-
147
-
-
0033609892
-
PriA-directed assembly of a primosome on D loop DNA
-
Liu J Marians KJ 1999 PriA-directed assembly of a primosome on D loop DNA J Biol Chem 274 25033 25041
-
(1999)
J Biol Chem
, vol.274
, pp. 25033-25041
-
-
Liu J1
Marians, K.J.2
-
148
-
-
0023433855
-
Supercoiling of the DNA template during transcription
-
Liu LF Wang JC 1987 Supercoiling of the DNA template during transcription Proc Natl Acad Sci USA 84 7024 7027
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, pp. 7024-7027
-
-
Liu F, L.1
Wang, J.C.2
-
149
-
-
0027276140
-
Studies of bacteriophage P2 DNA replication. the DNA sequence of the cis-acting gene a and ori region and construction of a P2 mini-chromosome
-
Liu Y Saha S Haggård-Liungquist E 1993 Studies of bacteriophage P2 DNA replication. The DNA sequence of the cis-acting gene A and ori region and construction of a P2 mini-chromosome J Mol Biol 231 361 374
-
(1993)
J Mol Biol
, vol.231
, pp. 361-374
-
-
Liu Y1
Saha, S.2
Haggård-Liungquist, E.3
-
150
-
-
0033616683
-
Replication fork assembly at recombination intermediates is required for bacterial growth
-
Liu J Xu L Sandler SJ Marians KJ 1999 Replication fork assembly at recombination intermediates is required for bacterial growth Proc Natl Acad Sci USA 96 3552 3555
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 3552-3555
-
-
Liu J1
Xu, L.2
Sandler, S.J.3
Marians, K.J.4
-
152
-
-
6044247519
-
Genome of bacteriophage P1
-
Lobocka MB Rose DJ Plunkett G III. Rusin M Samojedny A Lehnherr H Yarmolinsky MB Blattner FR 2004 Genome of bacteriophage P1 J Bacteriol 186 7032 7068
-
(2004)
J Bacteriol
, vol.186
, pp. 7032-7068
-
-
Lobocka B, M.1
Rose, D.J.2
Plunkett Iii., G.3
Rusin, M.4
Samojedny, A.5
Lehnherr, H.6
Yarmolinsky, M.B.7
Blattner, F.R.8
-
153
-
-
0035902496
-
Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I
-
Lopez de Saro FJ O'Donnell M 2001 Interaction of the beta sliding clamp with MutS, ligase, and DNA polymerase I Proc Natl Acad Sci USA 98 8376 8380
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8376-8380
-
-
Lopez De Saro, F.J.1
O'Donnell, M.2
-
154
-
-
0032167615
-
Mechanistic studies of initiator-initiator interaction and replication initiation
-
Lu YB Datta HJ Bastia D 1998 Mechanistic studies of initiator-initiator interaction and replication initiation EMBO J 17 5192 5200
-
(1998)
EMBO J
, vol.17
, pp. 5192-5200
-
-
Lu B, Y.1
Datta, H.J.2
Bastia, D.3
-
155
-
-
0020094781
-
Two alternative mechanisms for initiation of DNA replication forks in bacteriophage T4 priming by RNA polymerase and by recombination
-
Luder A Mosig G 1982 Two alternative mechanisms for initiation of DNA replication forks in bacteriophage T4 priming by RNA polymerase and by recombination Proc Natl Acad Sci USA 79 1101 1105
-
(1982)
Proc Natl Acad Sci USA
, vol.79
, pp. 1101-1105
-
-
Luder A1
Mosig, G.2
-
156
-
-
0021912825
-
The phylogenetic position of Streptococcus and Enterococcus
-
Ludwig W Seewaldt E Kilpper-Balz R Schleifer KH Magrum L Woese CR Fox GE Stackebrandt E 1985 The phylogenetic position of Streptococcus and Enterococcus J Gen Microbiol 131 Part 3 543 551
-
(1985)
J Gen Microbiol
, vol.131
, Issue.3 PART
, pp. 543-551
-
-
Ludwig W1
Seewaldt, E.2
Kilpper-Balz, R.3
Schleifer, K.H.4
Magrum, L.5
Woese, C.R.6
Fox, G.E.7
Stackebrandt, E.8
-
157
-
-
0001641514
-
Mutations of bacteria from virus sensitivity to virus resistance
-
Luria SE Delbrück M 1943 Mutations of bacteria from virus sensitivity to virus resistance Genetics 28 491 511
-
(1943)
Genetics
, vol.28
, pp. 491-511
-
-
Luria E, S.1
Delbrück, M.2
-
158
-
-
0035997347
-
The bacterial RecA protein and the recombinational DNA repair of stalled replication forks
-
Lusetti SL Cox MM 2002 The bacterial RecA protein and the recombinational DNA repair of stalled replication forks Annu Rev Biochem 71 71 100
-
(2002)
Annu Rev Biochem
, vol.71
, pp. 71-100
-
-
Lusetti L, S.1
Cox, M.M.2
-
161
-
-
0035287417
-
Analysis of the genetic switch and replication region of a P335-type bacteriophage with an obligate lytic lifestyle on Lactococcus lactis
-
Madsen SM Mills D Djordjevic G Israelsen H Klaenhammer TR 2001 Analysis of the genetic switch and replication region of a P335-type bacteriophage with an obligate lytic lifestyle on Lactococcus lactis Appl Environ Microbiol 67 1128 1139
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 1128-1139
-
-
Madsen M, S.1
Mills, D.2
Djordjevic, G.3
Israelsen, H.4
Klaenhammer, T.R.5
-
162
-
-
0035724677
-
Replication arrests during a single round of replication of the Escherichia coli chromosome in the absence of DnaC activity
-
Maisnier-Patin S Nordström K Dasgupta S 2001 Replication arrests during a single round of replication of the Escherichia coli chromosome in the absence of DnaC activity Mol Microbiol 42 1371 1382
-
(2001)
Mol Microbiol
, vol.42
, pp. 1371-1382
-
-
Maisnier-Patin S1
Nordström, K.2
Dasgupta, S.3
-
163
-
-
1542268890
-
RNA-dependent RNA polymerases of dsRNA bacteriophages
-
Makeyev EV Grimes JM 2004 RNA-dependent RNA polymerases of dsRNA bacteriophages Virus Res 101 45 55
-
(2004)
Virus Res
, vol.101
, pp. 45-55
-
-
Makeyev V, E.1
Grimes, J.M.2
-
164
-
-
4444321635
-
RepA protein of the bacteriophage N15 exhibits activity of DNA helicase
-
Mardanov AV Strakhova TS Ravin NV 2004 RepA protein of the bacteriophage N15 exhibits activity of DNA helicase Dokl Biochem Biophys 397 217 219
-
(2004)
Dokl Biochem Biophys
, vol.397
, pp. 217-219
-
-
Mardanov V, A.1
Strakhova, T.S.2
Ravin, N.V.3
-
166
-
-
0035233714
-
A tale of two HSV1 helicases roles of phage and animal virus helicases in DNA replication and recombination
-
Marintcheva B Weller SK 2001a A tale of two HSV1 helicases roles of phage and animal virus helicases in DNA replication and recombination Prog Nucleic Acid Res Mol Biol 70 77 118
-
(2001)
Prog Nucleic Acid Res Mol Biol
, vol.70
, pp. 77-118
-
-
Marintcheva B1
Weller, S.K.2
-
167
-
-
0035794155
-
Residues within the conserved helicase motifs of UL9, the origin-binding protein of herpes simplex virus-1, are essential for helicase activity but not for dimerization or origin binding activity
-
Marintcheva B Weller SK 2001b Residues within the conserved helicase motifs of UL9, the origin-binding protein of herpes simplex virus-1, are essential for helicase activity but not for dimerization or origin binding activity J Biol Chem 276 6605 6615
-
(2001)
J Biol Chem
, vol.276
, pp. 6605-6615
-
-
Marintcheva B1
Weller, S.K.2
-
169
-
-
0028102357
-
DnaA protein directs the binding of DnaB protein in initiation of DNA replication in Escherichia coli
-
Marszalek J Kaguni JM 1994 DnaA protein directs the binding of DnaB protein in initiation of DNA replication in Escherichia coli J Biol Chem 269 4883 4890
-
(1994)
J Biol Chem
, vol.269
, pp. 4883-4890
-
-
Marszalek J1
Kaguni, J.M.2
-
170
-
-
0024413818
-
Characterization of the phage phi 29 protein p5 as a single-stranded DNA binding protein. Function in phi 29 DNA-protein p3 replication
-
Martín G Lázaro JM Méndez E Salas M 1989 Characterization of the phage phi 29 protein p5 as a single-stranded DNA binding protein. Function in phi 29 DNA-protein p3 replication Nucleic Acids Res 17 3663 3672
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 3663-3672
-
-
Martín G1
Lázaro, J.M.2
Méndez, E.3
Salas, M.4
-
171
-
-
0023791504
-
Operon structure of dnaT and dnaC genes essential for normal and stable DNA replication of Escherichia coli chromosome
-
Masai H Arai K 1988 Operon structure of dnaT and dnaC genes essential for normal and stable DNA replication of Escherichia coli chromosome J Biol Chem 263 15083 15093
-
(1988)
J Biol Chem
, vol.263
, pp. 15083-15093
-
-
Masai H1
Arai, K.2
-
172
-
-
0025100292
-
The ABC-primosome. a novel priming system employing dnaA, dnaB, dnaC, and primase on a hairpin containing a dnaA box sequence
-
Masai H Nomura N Arai K 1990 The ABC-primosome. A novel priming system employing dnaA, dnaB, dnaC, and primase on a hairpin containing a dnaA box sequence J Biol Chem 265 15134 15144
-
(1990)
J Biol Chem
, vol.265
, pp. 15134-15144
-
-
Masai H1
Nomura, N.2
Arai, K.3
-
173
-
-
0028148226
-
Escherichia coli PriA protein is essential for inducible and constitutive stable DNA replication
-
Masai H Asai T Kubota Y Arai K Kogoma T 1994 Escherichia coli PriA protein is essential for inducible and constitutive stable DNA replication EMBO J 13 5338 5345
-
(1994)
EMBO J
, vol.13
, pp. 5338-5345
-
-
Masai H1
Asai, T.2
Kubota, Y.3
Arai, K.4
Kogoma, T.5
-
174
-
-
0031818287
-
A C-terminal helicase domain of the human papillomavirus E1 protein binds E2 and the DNA polymerase alpha-primase p68 subunit
-
Masterson PJ Stanley MA Lewis AP Romanos MA 1998 A C-terminal helicase domain of the human papillomavirus E1 protein binds E2 and the DNA polymerase alpha-primase p68 subunit J Virol 72 7407 7419
-
(1998)
J Virol
, vol.72
, pp. 7407-7419
-
-
Masterson J, P.1
Stanley, M.A.2
Lewis, A.P.3
Romanos, M.A.4
-
176
-
-
0032544117
-
Two empires or three?
-
Mayr E 1998 Two empires or three? Proc Natl Acad Sci USA 95 9720 9723
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 9720-9723
-
-
Mayr E1
-
177
-
-
1542297764
-
Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP
-
McGarry KC Ryan VT Grimwade JE Leonard AC 2004 Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP Proc Natl Acad Sci USA 101 2811 2816
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 2811-2816
-
-
McGarry C, K.1
Ryan, V.T.2
Grimwade, J.E.3
Leonard, A.C.4
-
178
-
-
0034737294
-
Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression
-
McGlynn P Lloyd RG 2000 Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression Cell 101 35 45
-
(2000)
Cell
, vol.101
, pp. 35-45
-
-
McGlynn P1
Lloyd, R.G.2
-
181
-
-
0026756601
-
Initiation of phi 29 DNA replication occurs at the second 3′ nucleotide of the linear template a sliding-back mechanism for protein-primed DNA replication
-
Méndez J Blanco L Esteban JA Bernad A Salas M 1992 Initiation of phi 29 DNA replication occurs at the second 3′ nucleotide of the linear template a sliding-back mechanism for protein-primed DNA replication Proc Natl Acad Sci USA 89 9579 9583
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 9579-9583
-
-
Méndez J1
Blanco, L.2
Esteban, J.A.3
Bernad, A.4
Salas, M.5
-
182
-
-
0040528887
-
Protein-primed DNA replication a transition between two modes of priming by a unique DNA polymerase
-
Méndez J Blanco L Salas M 1997 Protein-primed DNA replication a transition between two modes of priming by a unique DNA polymerase EMBO J 16 2519 2527
-
(1997)
EMBO J
, vol.16
, pp. 2519-2527
-
-
Méndez J1
Blanco, L.2
Salas, M.3
-
184
-
-
0036843139
-
The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication
-
Messer W 2002 The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication FEMS Microbiol Rev 26 355 374
-
(2002)
FEMS Microbiol Rev
, vol.26
, pp. 355-374
-
-
Messer W1
-
186
-
-
0036947671
-
Streptomyces and Escherichia coli, model organisms for the analysis of the initiation of bacterial chromosome replication
-
Messer W Zakrewska-Czerwinska J 2002 Streptomyces and Escherichia coli, model organisms for the analysis of the initiation of bacterial chromosome replication Arch Immunol Ther Exp (Warsz) 50 393 398
-
(2002)
Arch Immunol Ther Exp (Warsz)
, vol.50
, pp. 393-398
-
-
Messer W1
Zakrewska-Czerwinska, J.2
-
187
-
-
0036018291
-
The genome of bacteriophage phiKZ of Pseudomonas aeruginosa
-
Mesyanzhinov VV Robben J Grymonprez B Kostyuchenko VA Bourkaltseva MV Sykilinda NN Krylov VN Volckaert G 2002 The genome of bacteriophage phiKZ of Pseudomonas aeruginosa J Mol Biol 317 1 19
-
(2002)
J Mol Biol
, vol.317
, pp. 1-19
-
-
Mesyanzhinov V, V.1
Robben, J.2
Grymonprez, B.3
Kostyuchenko, V.A.4
Bourkaltseva, M.V.5
Sykilinda, N.N.6
Krylov, V.N.7
Volckaert, G.8
-
188
-
-
0020328623
-
Enzymatic synthesis of bacteriophage fd viral DNA
-
Meyer TF Geider K 1982 Enzymatic synthesis of bacteriophage fd viral DNA Nature 296 828 832
-
(1982)
Nature
, vol.296
, pp. 828-832
-
-
Meyer F, T.1
Geider, K.2
-
189
-
-
0031025093
-
DNA double-strand breaks caused by replication arrest
-
Michel B Ehrlich SD Uzest M 1997 DNA double-strand breaks caused by replication arrest EMBO J 16 430 438
-
(1997)
EMBO J
, vol.16
, pp. 430-438
-
-
Michel B1
Ehrlich, S.D.2
Uzest, M.3
-
191
-
-
1542268889
-
Packaging, replication and recombination of the segmented genome of bacteriophage Phi6 and its relatives
-
Mindich L 2004 Packaging, replication and recombination of the segmented genome of bacteriophage Phi6 and its relatives Virus Res 101 83 92
-
(2004)
Virus Res
, vol.101
, pp. 83-92
-
-
Mindich L1
-
192
-
-
0031552604
-
The replisome organizer (G38P) of Bacillus subtilis bacteriophage SPP1 forms specialized nucleoprotein complexes with two discrete distant regions of the SPP1 genome
-
Missich R Weise F Chai S Lurz R Pedré X Alonso JC 1997 The replisome organizer (G38P) of Bacillus subtilis bacteriophage SPP1 forms specialized nucleoprotein complexes with two discrete distant regions of the SPP1 genome J Mol Biol 270 50 64
-
(1997)
J Mol Biol
, vol.270
, pp. 50-64
-
-
Missich R1
Weise, F.2
Chai, S.3
Lurz, R.4
Pedré, X.5
Alonso, J.C.6
-
193
-
-
0033960153
-
Multiple independent horizontal transfers of informational genes from bacteria to plasmids and phages implications for the origin of bacterial replication machinery
-
Moreira D 2000 Multiple independent horizontal transfers of informational genes from bacteria to plasmids and phages implications for the origin of bacterial replication machinery Mol Microbiol 35 1 5
-
(2000)
Mol Microbiol
, vol.35
, pp. 1-5
-
-
Moreira D1
-
194
-
-
0036299014
-
Bacteriophage Mu genome sequence analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus
-
Morgan GJ Hatfull GF Casjens S Hendrix RW 2002 Bacteriophage Mu genome sequence analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus J Mol Biol 317 337 359
-
(2002)
J Mol Biol
, vol.317
, pp. 337-359
-
-
Morgan J, G.1
Hatfull, G.F.2
Casjens, S.3
Hendrix, R.W.4
-
195
-
-
0032958074
-
Regulation of initiation of Bacillus subtilis chromosome replication
-
Moriya S Imai Y Hassan AK Ogasawara N 1999 Regulation of initiation of Bacillus subtilis chromosome replication Plasmid 41 17 29
-
(1999)
Plasmid
, vol.41
, pp. 17-29
-
-
Moriya S1
Imai, Y.2
Hassan, A.K.3
Ogasawara, N.4
-
196
-
-
0342323852
-
Characterization of the DNA replication module of bacteriophage A2 and use of its origin of replication as a defense against infection during milk fermentation by Lactobacillus casei
-
Moscoso M Suarez JE 2000 Characterization of the DNA replication module of bacteriophage A2 and use of its origin of replication as a defense against infection during milk fermentation by Lactobacillus casei Virology 273 101 111
-
(2000)
Virology
, vol.273
, pp. 101-111
-
-
Moscoso M1
Suarez, J.E.2
-
198
-
-
0032426554
-
Recombination and recombination-dependent DNA replication in bacteriophage T4
-
Mosig G 1998 Recombination and recombination-dependent DNA replication in bacteriophage T4 Annu Rev Genet 32 379 413
-
(1998)
Annu Rev Genet
, vol.32
, pp. 379-413
-
-
Mosig G1
-
199
-
-
0029120326
-
Multiple initiation mechanisms adapt phage T4 DNA replication to physiological changes during T4's development
-
Mosig G Colowick N Gruidl ME Chang A Harvey AJ 1995 Multiple initiation mechanisms adapt phage T4 DNA replication to physiological changes during T4's
-
(1995)
FEMS Microbiol Rev
, vol.17
, pp. 83-98
-
-
Mosig G1
Colowick, N.2
Gruidl, M.E.3
Chang, A.4
Harvey, A.J.5
-
200
-
-
11144356881
-
Partial analysis of the genomes of two nontypeable Haemophilus influenzae otitis media isolates
-
Munson RS Jr. Harrison A Gillaspy A et al 2004 Partial analysis of the genomes of two nontypeable Haemophilus influenzae otitis media isolates Infect Immun 72 3002 3010
-
(2004)
Infect Immun
, vol.72
, pp. 3002-3010
-
-
Munson Jr., R.S.1
Harrison, A.2
Gillaspy, A.3
Al, E.4
-
201
-
-
2342497784
-
Salmonella enterica serovar typhi strains from which SPI7, a 134-kilobase island with genes for Vi exopolysaccharide and other functions, has been deleted
-
Nair S Alokam S Kothapalli S et al 2004 Salmonella enterica serovar typhi strains from which SPI7, a 134-kilobase island with genes for Vi exopolysaccharide and other functions, has been deleted J Bacteriol 186 3214 3223
-
(2004)
J Bacteriol
, vol.186
, pp. 3214-3223
-
-
Nair S1
Alokam, S.2
Kothapalli, S.3
Al, E.4
-
202
-
-
0035902613
-
Handoff from recombinase to replisome insights from transposition
-
Nakai H Doseeva V Jones JM 2001 Handoff from recombinase to replisome insights from transposition Proc Natl Acad Sci USA 98 8247 8254
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8247-8254
-
-
Nakai H1
Doseeva, V.2
Jones, J.M.3
-
203
-
-
2442531727
-
Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species
-
Nelson KE Fouts DE Mongodin EF et al 2004 Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species Nucleic Acids Res 32 2386 2395
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2386-2395
-
-
Nelson E, K.1
Fouts, D.E.2
Mongodin, E.F.3
Al, E.4
-
204
-
-
0029666279
-
The ordered assembly of the phiX174-type primosome.2. Preservation of primosome composition from assembly through replication
-
Ng JY Marians KJ 1996 The ordered assembly of the phiX174-type primosome.2. Preservation of primosome composition from assembly through replication J Biol Chem 271 15649 15655
-
(1996)
J Biol Chem
, vol.271
, pp. 15649-15655
-
-
Ng Y, J.1
Marians, K.J.2
-
205
-
-
0038063026
-
The replicon theory 40 years. An EMBO workshop held in Villefranche sur Mer, France, January 18-23, 2003
-
Nordström K 2003 The replicon theory 40 years. An EMBO workshop held in Villefranche sur Mer, France, January 18-23, 2003 Plasmid 49 269 280
-
(2003)
Plasmid
, vol.49
, pp. 269-280
-
-
Nordström K1
-
206
-
-
0035102131
-
Bacteriophage T4 proteins replicate plasmids with a preformed R loop at the T4 ori (uvsY) replication origin in vitro
-
Nossal NG Dudas KC Kreuzer KN 2001 Bacteriophage T4 proteins replicate plasmids with a preformed R loop at the T4 ori (uvsY) replication origin in vitro Mol Cell 7 31 41
-
(2001)
Mol Cell
, vol.7
, pp. 31-41
-
-
Nossal G, N.1
Dudas, K.C.2
Kreuzer, K.N.3
-
207
-
-
1942443183
-
Genome of staphylococcal phage K a new lineage of myoviridae infecting Gram-positive bacteria with a low G+C content
-
O'Flaherty S Coffey A Edwards R Meaney W Fitzgerald GF Ross RP 2004 Genome of staphylococcal phage K a new lineage of myoviridae infecting Gram-positive bacteria with a low G+C content J Bacteriol 186 2862 2871
-
(2004)
J Bacteriol
, vol.186
, pp. 2862-2871
-
-
O'Flaherty S1
Coffey, A.2
Edwards, R.3
Meaney, W.4
Fitzgerald, G.F.5
Ross, R.P.6
-
208
-
-
0037378564
-
Genome organization and molecular analysis of the temperate bacteriophage MM1 of Streptococcus pneumoniae
-
Obregon V Garcia JL Garcia E Lopez R Garcia P 2003 Genome organization and molecular analysis of the temperate bacteriophage MM1 of Streptococcus pneumoniae J Bacteriol 185 2362 2368
-
(2003)
J Bacteriol
, vol.185
, pp. 2362-2368
-
-
Obregon, V.1
Garcia, J.L.2
Garcia, E.3
Lopez, R.4
Garcia, P.5
-
209
-
-
0023514080
-
Evolution in bacteria evidence for a universal substitution rate in cellular genomes
-
Ochman H Wilson AC 1987 Evolution in bacteria evidence for a universal substitution rate in cellular genomes J Mol Evol 26 74 86
-
(1987)
J Mol Evol
, vol.26
, pp. 74-86
-
-
Ochman, H.1
Wilson, A.C.2
-
210
-
-
0035957520
-
The two active-site tyrosine residues of the a protein play non-equivalent roles during initiation of rolling circle replication of bacteriophage p2
-
Odegrip R Haggård-Liungquist E 2001 The two active-site tyrosine residues of the a protein play non-equivalent roles during initiation of rolling circle replication of bacteriophage p2 J Mol Biol 308 147 163
-
(2001)
J Mol Biol
, vol.308
, pp. 147-163
-
-
Odegrip, R.1
Haggård-Liungquist, E.2
-
211
-
-
0035967899
-
DnaA boxes in the P1 plasmid origin the effect of their position on the directionality of replication and plasmid copy number
-
Park K Chattoraj DK 2001 DnaA boxes in the P1 plasmid origin the effect of their position on the directionality of replication and plasmid copy number J Mol Biol 310 69 81
-
(2001)
J Mol Biol
, vol.310
, pp. 69-81
-
-
Park, K.1
Chattoraj, D.K.2
-
212
-
-
0037453742
-
Origins of highly mosaic mycobacteriophage genomes
-
Pedulla ML Ford ME Houtz JM et al 2003 Origins of highly mosaic mycobacteriophage genomes Cell 113 171 182
-
(2003)
Cell
, vol.113
, pp. 171-182
-
-
Pedulla, M.L.1
Ford, M.E.2
Houtz, J.M.3
Al, E.4
-
213
-
-
0032785122
-
The nature of the last universal common ancestor
-
Penny D Poole A 1999 The nature of the last universal common ancestor Curr Opin Genet Dev 9 672 677
-
(1999)
Curr Opin Genet Dev
, vol.9
, pp. 672-677
-
-
Penny D1
Poole, A.2
-
214
-
-
0037124327
-
Essential bacterial helicases that counteract the toxicity of recombination proteins
-
Petit MA Ehrlich SD 2002 Essential bacterial helicases that counteract the toxicity of recombination proteins EMBO J 21 3137 3147
-
(2002)
EMBO J
, vol.21
, pp. 3137-3147
-
-
Petit A, M.1
Ehrlich, S.D.2
-
215
-
-
0031854048
-
PcrA is an essential DNA helicase of Bacillus subtilis fulfilling functions both in repair and rolling-circle replication
-
Petit MA Dervyn E Rose M Entian KD McGovern S Ehrlich SD Bruand C 1998 PcrA is an essential DNA helicase of Bacillus subtilis fulfilling functions both in repair and rolling-circle replication Mol Microbiol 29 261 273
-
(1998)
Mol Microbiol
, vol.29
, pp. 261-273
-
-
Petit A, M.1
Dervyn, E.2
Rose, M.3
Entian, K.D.4
McGovern, S.5
Ehrlich, S.D.6
Bruand, C.7
-
216
-
-
0020788833
-
Involvement of reverse transcription in the replication of cauliflower mosaic virus a detailed model and test of some aspects
-
Pfeiffer P Hohn T 1983 Involvement of reverse transcription in the replication of cauliflower mosaic virus a detailed model and test of some aspects Cell 33 781 789
-
(1983)
Cell
, vol.33
, pp. 781-789
-
-
Pfeiffer P1
Hohn, T.2
-
217
-
-
1542328800
-
Self-assembly of double-stranded RNA bacteriophages
-
Poranen MM Tuma R 2004 Self-assembly of double-stranded RNA bacteriophages Virus Res 101 93 100
-
(2004)
Virus Res
, vol.101
, pp. 93-100
-
-
Poranen M, M.1
Tuma, R.2
-
218
-
-
3142774839
-
Topological domain structure of the Escherichia coli chromosome
-
Postow L Hardy CD Arsuaga J Cozzarelli NR 2004 Topological domain structure of the Escherichia coli chromosome Genes Dev 18 1766 1779
-
(2004)
Genes Dev
, vol.18
, pp. 1766-1779
-
-
Postow L1
Hardy, C.D.2
Arsuaga, J.3
Cozzarelli, N.R.4
-
219
-
-
0026502006
-
Direct evidence for the effect of transcription on local DNA supercoiling in vivo
-
Rahmouni AR Wells RD 1992 Direct evidence for the effect of transcription on local DNA supercoiling in vivo J Mol Biol 223 131 144
-
(1992)
J Mol Biol
, vol.223
, pp. 131-144
-
-
Rahmouni R, A.1
Wells, R.D.2
-
221
-
-
0037432717
-
Mechanisms of replication and telomere resolution of the linear plasmid prophage N15
-
Ravin NV 2003 Mechanisms of replication and telomere resolution of the linear plasmid prophage N15 FEMS Microbiol Lett 221 1 6
-
(2003)
FEMS Microbiol Lett
, vol.221
, pp. 1-6
-
-
Ravin V, N.1
-
222
-
-
0035812626
-
The protelomerase of the phage-plasmid N15 is responsible for its maintenance in linear form
-
Ravin NV Strakhova TS Kuprianov VV 2001 The protelomerase of the phage-plasmid N15 is responsible for its maintenance in linear form J Mol Biol 312 899 906
-
(2001)
J Mol Biol
, vol.312
, pp. 899-906
-
-
Ravin V, N.1
Strakhova, T.S.2
Kuprianov, V.V.3
-
223
-
-
0345099615
-
Bidirectional replication from an internal ori site of the linear N15 plasmid prophage
-
Ravin NV Kuprianov VV Gilcrease EB Casjens SR 2003 Bidirectional replication from an internal ori site of the linear N15 plasmid prophage Nucleic Acids Res 31 6552 6560
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6552-6560
-
-
Ravin V, N.1
Kuprianov, V.V.2
Gilcrease, E.B.3
Casjens, S.R.4
-
224
-
-
0035204202
-
Comparative biology of IncQ and IncQ-like plasmids
-
Rawlings DE Tietze E 2001 Comparative biology of IncQ and IncQ-like plasmids Microbiol Mol Biol Rev 65 481 496
-
(2001)
Microbiol Mol Biol Rev
, vol.65
, pp. 481-496
-
-
Rawlings E, D.1
Tietze, E.2
-
225
-
-
0020775545
-
Bacteriophage T7 minimal requirements for the replication of a duplex DNA molecule
-
Richardson CC 1983 Bacteriophage T7 minimal requirements for the replication of a duplex DNA molecule Cell 33 315 317
-
(1983)
Cell
, vol.33
, pp. 315-317
-
-
Richardson C, C.1
-
226
-
-
0031662189
-
Transcriptional analysis and mutation of a dnaA-like gene in Synechocystis sp. PCC6803
-
Richter S Hagemann M Messer W 1998 Transcriptional analysis and mutation of a dnaA-like gene in Synechocystis sp. PCC6803 J Bacteriol 180 4946 4949
-
(1998)
J Bacteriol
, vol.180
, pp. 4946-4949
-
-
Richter S1
Hagemann, M.2
Messer, W.3
-
228
-
-
0029030019
-
The DNA binding domain of the initiator protein DnaA
-
Roth A Messer W 1995 The DNA binding domain of the initiator protein DnaA EMBO J 14 2106 2111
-
(1995)
EMBO J
, vol.14
, pp. 2106-2111
-
-
Roth A1
Messer, W.2
-
229
-
-
0018941217
-
Nucleotide sequence of the primary origin of bacteriophage T7 DNA replication relationship to adjacent genes and regulatory elements
-
Saito H Tabor S Tamanoi F Richardson CC 1980 Nucleotide sequence of the primary origin of bacteriophage T7 DNA replication relationship to adjacent genes and regulatory elements Proc Natl Acad Sci USA 77 3917 3921
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, pp. 3917-3921
-
-
Saito H1
Tabor, S.2
Tamanoi, F.3
Richardson, C.C.4
-
230
-
-
0034691148
-
Characterization of bacteriophage T4-coordinated leading- and lagging-strand synthesis on a minicircle substrate
-
Salinas F Benkovic SJ 2000 Characterization of bacteriophage T4-coordinated leading- and lagging-strand synthesis on a minicircle substrate Proc Natl Acad Sci USA 97 7196 7201
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 7196-7201
-
-
Salinas F1
Benkovic, S.J.2
-
231
-
-
0034123356
-
Multiple genetic pathways for restarting DNA replication forks in Escherichia coli K-12
-
Sandler SJ 2000 Multiple genetic pathways for restarting DNA replication forks in Escherichia coli K-12 Genetics 155 487 497
-
(2000)
Genetics
, vol.155
, pp. 487-497
-
-
Sandler J, S.1
-
232
-
-
0033988501
-
Role of PriA in replication fork reactivation in Escherichia coli
-
Sandler SJ Marians KJ 2000 Role of PriA in replication fork reactivation in Escherichia coli J Bacteriol 182 9 13
-
(2000)
J Bacteriol
, vol.182
, pp. 9-13
-
-
Sandler J, S.1
Marians, K.J.2
-
233
-
-
0032870793
-
DnaC mutations suppress defects in DNA replication- and recombination-associated functions in priB and priC double mutants in Escherichia coli K-12
-
Sandler SJ Marians KJ Zavitz KH Coutu J Parent MA Clark AJ 1999 dnaC mutations suppress defects in DNA replication- and recombination-associated functions in priB and priC double mutants in Escherichia coli K-12 Mol Microbiol 34 91 101
-
(1999)
Mol Microbiol
, vol.34
, pp. 91-101
-
-
Sandler J, S.1
Marians, K.J.2
Zavitz, K.H.3
Coutu, J.4
Parent, M.A.5
Clark, A.J.6
-
234
-
-
0016737258
-
Ten proteins required for conversion of phiX174 single-stranded DNA to duplex form in vitro. Resolution and reconstitution
-
Schekman R Weiner JH Weiner A Kornberg A 1975 Ten proteins required for conversion of phiX174 single-stranded DNA to duplex form in vitro. Resolution and reconstitution J Biol Chem 250 5859 5865
-
(1975)
J Biol Chem
, vol.250
, pp. 5859-5865
-
-
Schekman R1
Weiner, J.H.2
Weiner, A.3
Kornberg, A.4
-
235
-
-
0026080434
-
Plasmid RSF1010 DNA replication in vitro promoted by purified RSF1010 RepA, RepB and RepC proteins
-
Scherzinger E Haring V Lurz R Otto S 1991 Plasmid RSF1010 DNA replication in vitro promoted by purified RSF1010 RepA, RepB and RepC proteins Nucleic Acids Res 19 1203 1211
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 1203-1211
-
-
Scherzinger E1
Haring, V.2
Lurz, R.3
Otto, S.4
-
237
-
-
0023837775
-
Initiation protein induced helix destabilization at the lambda origin a prepriming step in DNA replication
-
Schnos M Zahn K Inman RB Blattner FR 1988 Initiation protein induced helix destabilization at the lambda origin a prepriming step in DNA replication Cell 52 385 395
-
(1988)
Cell
, vol.52
, pp. 385-395
-
-
Schnos M1
Zahn, K.2
Inman, R.B.3
Blattner, F.R.4
-
239
-
-
0033812649
-
The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli
-
Seitz H Weigel C Messer W 2000 The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli Mol Microbiol 37 1270 1279
-
(2000)
Mol Microbiol
, vol.37
, pp. 1270-1279
-
-
Seitz H1
Weigel, C.2
Messer, W.3
-
240
-
-
0024454856
-
Signals at the bacteriophage phi 29 DNA replication origins required for protein p6 binding and activity
-
Serrano M Gutiérrez J Prieto I Hermoso JM Salas M 1989 Signals at the bacteriophage phi 29 DNA replication origins required for protein p6 binding and activity EMBO J 8 1879 1885
-
(1989)
EMBO J
, vol.8
, pp. 1879-1885
-
-
Serrano M1
Gutiérrez, J.2
Prieto, I.3
Hermoso, J.M.4
Salas, M.5
-
241
-
-
0027530897
-
Superhelical path of the DNA in the nucleoprotein complex that activates the initiation of phage phi 29 DNA replication
-
Serrano M Gutiérrez C Salas M Hermoso JM 1993 Superhelical path of the DNA in the nucleoprotein complex that activates the initiation of phage phi 29 DNA replication J Mol Biol 230 248 259
-
(1993)
J Mol Biol
, vol.230
, pp. 248-259
-
-
Serrano M1
Gutiérrez, C.2
Salas, M.3
Hermoso, J.M.4
-
242
-
-
0025048736
-
Role of gene 6 exonuclease in the replication and packaging of bacteriophage T7 DNA
-
Serwer P Watson RH Son M 1990 Role of gene 6 exonuclease in the replication and packaging of bacteriophage T7 DNA J Mol Biol 215 287 299
-
(1990)
J Mol Biol
, vol.215
, pp. 287-299
-
-
Serwer P1
Watson, R.H.2
Son, M.3
-
243
-
-
0023008476
-
Initiation of Escherichiacoli minichromosome replication at oriC and at protein n' recognition sites. Two modes for initiating DNA synthesis invitro
-
Seufert W Messer W 1986 Initiation of Escherichiacoli minichromosome replication at oriC and at protein n' recognition sites. Two modes for initiating DNA synthesis invitro EMBO J 5 3401 3406
-
(1986)
EMBO J
, vol.5
, pp. 3401-3406
-
-
Seufert W1
Messer, W.2
-
244
-
-
1942436909
-
Initial cos cleavage of bacteriophage lambda concatemers requires proheads and gpFI in vivo
-
Sippy J Feiss M 2004 Initial cos cleavage of bacteriophage lambda concatemers requires proheads and gpFI in vivo Mol Microbiol 52 501 513
-
(2004)
Mol Microbiol
, vol.52
, pp. 501-513
-
-
Sippy J1
Feiss, M.2
-
245
-
-
0027166694
-
Sites and gene products involved in lambdoid phage DNA packaging
-
Smith MP Feiss M 1993 Sites and gene products involved in lambdoid phage DNA packaging J Bacteriol 175 2393 2399
-
(1993)
J Bacteriol
, vol.175
, pp. 2393-2399
-
-
Smith P, M.1
Feiss, M.2
-
246
-
-
0028972546
-
Helix-destabilizing activity of phi 29 single-stranded DNA binding protein effect on the elongation rate during strand displacement DNA replication
-
Soengas MS Gutiérrez C Salas M 1995 Helix-destabilizing activity of phi 29 single-stranded DNA binding protein effect on the elongation rate during strand displacement DNA replication J Mol Biol 253 517 529
-
(1995)
J Mol Biol
, vol.253
, pp. 517-529
-
-
Soengas S, M.1
Gutiérrez, C.2
Salas, M.3
-
248
-
-
0027284268
-
The direction and rate of bacteriophage T7 DNA packaging in vitro
-
Son M Watson RH Serwer P 1993 The direction and rate of bacteriophage T7 DNA packaging in vitro Virology 196 282 289
-
(1993)
Virology
, vol.196
, pp. 282-289
-
-
Son, M.1
Watson, R.H.2
Serwer, P.3
-
249
-
-
0035869023
-
Mechanism of origin unwinding sequential binding of DnaA initiator protein to double-stranded and single-stranded DNA in the AT-rich region of the replication origin
-
Speck C Messer W 2001 Mechanism of origin unwinding sequential binding of DnaA initiator protein to double-stranded and single-stranded DNA in the AT-rich region of the replication origin EMBO J 20 1469 1476
-
(2001)
EMBO J
, vol.20
, pp. 1469-1476
-
-
Speck C1
Messer, W.2
-
250
-
-
0022429101
-
In phage lambda, cos is a recombinator in the red pathway
-
Stahl FW Kobayashi I Stahl MM 1985 In phage lambda, cos is a recombinator in the red pathway J Mol Biol 181 199 209
-
(1985)
J Mol Biol
, vol.181
, pp. 199-209
-
-
Stahl W, F.1
Kobayashi, I.2
Stahl, M.M.3
-
252
-
-
0033986796
-
Identification of four loci isolated from two Streptococcus thermophilus phage genomes responsible for mediating bacteriophage resistance
-
Stanley E Walsh L van der Zwet A Fitzgerald GF van Sinderen D 2000 Identification of four loci isolated from two Streptococcus thermophilus phage genomes responsible for mediating bacteriophage resistance FEMS Microbiol Lett 182 271 277
-
(2000)
FEMS Microbiol Lett
, vol.182
, pp. 271-277
-
-
Stanley E1
Walsh, L.2
Van Der Zwet, A.3
Fitzgerald, G.F.4
Van Sinderen, D.5
-
253
-
-
0021100251
-
Complexes of Escherichia coli primase with the replication origin of G4 phage DNA
-
Stayton MM Kornberg A 1983 Complexes of Escherichia coli primase with the replication origin of G4 phage DNA J Biol Chem 258 13205 13212
-
(1983)
J Biol Chem
, vol.258
, pp. 13205-13212
-
-
Stayton M, M.1
Kornberg, A.2
-
255
-
-
14844288292
-
Protein associations in DnaA-ATP hydrolysis mediated by the replicase clamp-Hda complex
-
Su'etsugu M Shimuta TR Ishida T Kawakami H Katayama T 2004 Protein associations in DnaA-ATP hydrolysis mediated by the replicase clamp-Hda complex J Biol Chem 280 6528 6
-
(2004)
J Biol Chem
, vol.280
, pp. 6528-6
-
-
Su'etsugu M1
Shimuta, T.R.2
Ishida, T.3
Kawakami, H.4
Katayama, T.5
-
257
-
-
2942585211
-
Burkholderia cenocepacia phage BcepMu and a family of Mu-like phages encoding potential pathogenesis factors
-
Summer EJ Gonzalez CF Carlisle T Mebane LM Cass AM Savva CG LiPuma JJ Young R 2004 Burkholderia cenocepacia phage BcepMu and a family of Mu-like phages encoding potential pathogenesis factors J Mol Biol 340 49 65
-
(2004)
J Mol Biol
, vol.340
, pp. 49-65
-
-
Summer J, E.1
Gonzalez, C.F.2
Carlisle, T.3
Mebane, L.M.4
Cass, A.M.5
Savva, C.G.6
Lipuma, J.J.7
Young, R.8
-
258
-
-
0016628339
-
The starting point and direction of rolling-circle replicative intermediates of coliphage lambda DNA
-
Takahashi S 1975 The starting point and direction of rolling-circle replicative intermediates of coliphage lambda DNA Mol Gen Genet 142 137 153
-
(1975)
Mol Gen Genet
, vol.142
, pp. 137-153
-
-
Takahashi S1
-
259
-
-
0018291009
-
The rep mutation. VI. Purification and properties of the Escherichia coli rep protein, DNA helicase III
-
Takahashi S Hours C Chu A Denhardt DT 1979 The rep mutation. VI. Purification and properties of the Escherichia coli rep protein, DNA helicase III Can J Biochem 57 855 866
-
(1979)
Can J Biochem
, vol.57
, pp. 855-866
-
-
Takahashi S1
Hours, C.2
Chu, A.3
Denhardt, D.T.4
-
260
-
-
0019185853
-
Physical mapping of primary and secondary origins of bacteriophage T7 DNA replication
-
Tamanoi F Saito H Richardson CC 1980 Physical mapping of primary and secondary origins of bacteriophage T7 DNA replication Proc Natl Acad Sci USA 77 2656 2660
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, pp. 2656-2660
-
-
Tamanoi F1
Saito, H.2
Richardson, C.C.3
-
261
-
-
0032964297
-
BLAST 2 sequences, a new tool for comparing protein and nucleotide sequences
-
Tatusova TA Madden TL 1999 BLAST 2 sequences, a new tool for comparing protein and nucleotide sequences FEMS Microbiol Lett 174 247 250
-
(1999)
FEMS Microbiol Lett
, vol.174
, pp. 247-250
-
-
Tatusova A, T.1
Madden, T.L.2
-
262
-
-
0029147715
-
Replication of coliphage lambda DNA
-
Taylor K Wegrzyn G 1995 Replication of coliphage lambda DNA FEMS Microbiol Rev 17 109 119
-
(1995)
FEMS Microbiol Rev
, vol.17
, pp. 109-119
-
-
Taylor K1
Wegrzyn, G.2
-
265
-
-
0029832926
-
The extreme C terminus of primase is required for interaction with DnaB at the replication fork
-
Tougu K Marians KJ 1996 The extreme C terminus of primase is required for interaction with DnaB at the replication fork J Biol Chem 271 21391 21397
-
(1996)
J Biol Chem
, vol.271
, pp. 21391-21397
-
-
Tougu K1
Marians, K.J.2
-
266
-
-
0036152835
-
Mobile elements as a combination of functional modules
-
Toussaint A Merlin C 2002 Mobile elements as a combination of functional modules Plasmid 47 26 35
-
(2002)
Plasmid
, vol.47
, pp. 26-35
-
-
Toussaint A1
Merlin, C.2
-
267
-
-
0034646401
-
Insights into DNA replication from the third domain of life
-
Tye BK 2000 Insights into DNA replication from the third domain of life Proc Natl Acad Sci USA 97 2399 2401
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 2399-2401
-
-
Tye K, B.1
-
268
-
-
0020364657
-
Bacteriophage T4 gene 41 protein, required for the synthesis of RNA primers, is also a DNA helicase
-
Venkatesan M Silver LL Nossal NG 1982 Bacteriophage T4 gene 41 protein, required for the synthesis of RNA primers, is also a DNA helicase J Biol Chem 257 12426 12434
-
(1982)
J Biol Chem
, vol.257
, pp. 12426-12434
-
-
Venkatesan M1
Silver, L.L.2
Nossal, N.G.3
-
269
-
-
0038497542
-
Molecular structure of nucleic acids a structure for deoxyribose nucleic acid
-
Watson JD Crick F 1953 Molecular structure of nucleic acids a structure for deoxyribose nucleic acid Nature 171 737
-
(1953)
Nature
, vol.171
, pp. 737
-
-
Watson D, J.1
Crick, F.2
-
270
-
-
0036436076
-
Strand-specific loading of DnaB helicase by DnaA to a substrate mimicking unwound oriC
-
Weigel C Seitz H 2002 Strand-specific loading of DnaB helicase by DnaA to a substrate mimicking unwound oriC Mol Microbiol 46 1149 1156
-
(2002)
Mol Microbiol
, vol.46
, pp. 1149-1156
-
-
Weigel C1
Seitz, H.2
-
272
-
-
0027968224
-
Nucleotide sequence and complementation studies of the gene 35 region of the Bacillus subtilis bacteriophage SPP1
-
Weise F Chai S Lüder G Alonso JC 1994 Nucleotide sequence and complementation studies of the gene 35 region of the Bacillus subtilis bacteriophage SPP1 Virology 202 1046 1049
-
(1994)
Virology
, vol.202
, pp. 1046-1049
-
-
Weise F1
Chai, S.2
Lüder, G.3
Alonso, J.C.4
-
273
-
-
0019126824
-
Bacteriophage T7 DNA replication in vitro. Electron micrographic analysis of T7 DNA synthesized with purified proteins
-
Wever GH Fischer H Hinkle DC 1980 Bacteriophage T7 DNA replication in vitro. Electron micrographic analysis of T7 DNA synthesized with purified proteins J Biol Chem 255 7965 7972
-
(1980)
J Biol Chem
, vol.255
, pp. 7965-7972
-
-
Wever H, G.1
Fischer, H.2
Hinkle, D.C.3
-
274
-
-
0023664536
-
Processing of concatemers of bacteriophage T7 DNA in vitro
-
White JH Richardson CC 1987 Processing of concatemers of bacteriophage T7 DNA in vitro J Biol Chem 262 8851 8860
-
(1987)
J Biol Chem
, vol.262
, pp. 8851-8860
-
-
White H, J.1
Richardson, C.C.2
-
275
-
-
0021719652
-
DNA-dependent ATPase activity associated with phage P22 gene 12 protein
-
Wickner S 1984a DNA-dependent ATPase activity associated with phage P22 gene 12 protein J Biol Chem 259 14038 14043
-
(1984)
J Biol Chem
, vol.259
, pp. 14038-14043
-
-
Wickner S1
-
276
-
-
0021690288
-
Oligonucleotide synthesis by Escherichia coli dnaG primase in conjunction with phage P22 gene 12 protein
-
Wickner S 1984b Oligonucleotide synthesis by Escherichia coli dnaG primase in conjunction with phage P22 gene 12 protein J Biol Chem 259 14044 14047
-
(1984)
J Biol Chem
, vol.259
, pp. 14044-14047
-
-
Wickner S1
-
277
-
-
0034682457
-
Interpreting the universal phylogenetic tree
-
Woese CR 2000 Interpreting the universal phylogenetic tree Proc Natl Acad Sci USA 97 8392 8396
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 8392-8396
-
-
Woese R, C.1
-
278
-
-
0037173066
-
On the evolution of cells
-
Woese CR 2002 On the evolution of cells Proc Natl Acad Sci USA 99 8742 8747
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 8742-8747
-
-
Woese R, C.1
-
279
-
-
0015506478
-
On the structure of the folded chromosome of Escherichia coli
-
Worcel A Burgi E 1972 On the structure of the folded chromosome of Escherichia coli J Mol Biol 71 127 147
-
(1972)
J Mol Biol
, vol.71
, pp. 127-147
-
-
Worcel A1
Burgi, E.2
-
280
-
-
0036116401
-
Evolution of lambdoid replication modules
-
Wrobel B Wegrzyn G 2002 Evolution of lambdoid replication modules Virus Genes 24 163 171
-
(2002)
Virus Genes
, vol.24
, pp. 163-171
-
-
Wrobel B1
Wegrzyn, G.2
-
282
-
-
0026726616
-
ATPase-deficient mutants of the Escherichia coli DNA replication protein PriA are capable of catalyzing the assembly of active primosomes
-
Zavitz KH Marians KJ 1992 ATPase-deficient mutants of the Escherichia coli DNA replication protein PriA are capable of catalyzing the assembly of active primosomes J Biol Chem 267 6933 6940
-
(1992)
J Biol Chem
, vol.267
, pp. 6933-6940
-
-
Zavitz H, K.1
Marians, K.J.2
-
283
-
-
0026660979
-
Coordinated leading- and lagging-strand synthesis at the Escherichia coli DNA replication fork. III. a polymerase-primase interaction governs primer size
-
Zechner EL Wu CA Marians KJ 1992 Coordinated leading- and lagging-strand synthesis at the Escherichia coli DNA replication fork. III. A polymerase-primase interaction governs primer size J Biol Chem 267 4054 4063
-
(1992)
J Biol Chem
, vol.267
, pp. 4054-4063
-
-
Zechner L, E.1
Wu, C.A.2
Marians, K.J.3
-
284
-
-
18244406269
-
The repA gene of the linear Yersiniaenterocolitica prophage PY54 functions as a circular minimal replicon in Escherichia coli
-
Ziegelin G Tegtmeyer N Lurz R Hertwig S Hammerl J Appel B Lanka E 2005 The repA gene of the linear Yersiniaenterocolitica prophage PY54 functions as a circular minimal replicon in Escherichia coli J Bacteriol 187 3445 3454
-
(2005)
J Bacteriol
, vol.187
, pp. 3445-3454
-
-
Ziegelin G1
Tegtmeyer, N.2
Lurz, R.3
Hertwig, S.4
Hammerl, J.5
Appel, B.6
Lanka, E.7
-
285
-
-
0032431025
-
Formation of the preprimosome protects lambda O from RNA transcription-dependent proteolysis by ClpP/ClpX
-
Zylicz M Liberek K Wawrzynow A Georgopoulos C 1998 Formation of the preprimosome protects lambda O from RNA transcription-dependent proteolysis by ClpP/ClpX Proc Natl Acad Sci USA 95 15259 15263
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 15259-15263
-
-
Zylicz M1
Liberek, K.2
Wawrzynow, A.3
Georgopoulos, C.4
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