-
1
-
-
0023428980
-
P1 plasmid replication requires methylated DNA
-
Abeles, A. L., and S. J. Austin. 1987. P1 plasmid replication requires methylated DNA. EMBO J. 10:3185-3189.
-
(1987)
EMBO J.
, vol.10
, pp. 3185-3189
-
-
Abeles, A.L.1
Austin, S.J.2
-
2
-
-
0024297437
-
P1 plasmid replication requires Escherichia coli Dam-methylated DNA
-
Abeles, A. L., and S. J. Austin. 1988. P1 plasmid replication requires Escherichia coli Dam-methylated DNA. Gene 74:185-186.
-
(1988)
Gene
, vol.74
, pp. 185-186
-
-
Abeles, A.L.1
Austin, S.J.2
-
3
-
-
0027131801
-
Evidence of two levels of control of P1 oriR and host oriC replication origins by DNA adenine methylation
-
Abeles, A. L., T. Brendler, and S. J. Austin. 1993. Evidence of two levels of control of P1 oriR and host oriC replication origins by DNA adenine methylation. J. Bacteriol. 175:7801-7807.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 7801-7807
-
-
Abeles, A.L.1
Brendler, T.2
Austin, S.J.3
-
4
-
-
0025361920
-
A single DnaA box is sufficient for initiation from the P1 plasmid origin
-
Abeles, A. L., L. D. Reaves, and S. J. Austin. 1990. A single DnaA box is sufficient for initiation from the P1 plasmid origin. J. Bacteriol. 172:4386-4391.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 4386-4391
-
-
Abeles, A.L.1
Reaves, L.D.2
Austin, S.J.3
-
5
-
-
0029557841
-
Control of P1 plasmid replication by iterons
-
Abeles, A. L., L. D. Reaves, B. Youngre-Grimes, and S. J. Austin. 1995. Control of P1 plasmid replication by iterons. Mol. Microbiol. 18:903-912.
-
(1995)
Mol. Microbiol.
, vol.18
, pp. 903-912
-
-
Abeles, A.L.1
Reaves, L.D.2
Youngre-Grimes, B.3
Austin, S.J.4
-
7
-
-
0029941411
-
Isolation and characterization of pLS1 plasmid mutants with increased copy numbers
-
Acebo, P., M. T. Alda, M. Espinosa, and G. del Solar. 1996. Isolation and characterization of pLS1 plasmid mutants with increased copy numbers. FEMS Microbiol. Lett. 140:85-91.
-
(1996)
FEMS Microbiol. Lett.
, vol.140
, pp. 85-91
-
-
Acebo, P.1
Alda, M.T.2
Espinosa, M.3
Del Solar, G.4
-
8
-
-
0026712869
-
The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication
-
Adams, D. E., E. M. Shektman, E. L. Zechiedrich, M. B. Schmid, and N. R. Cozzarelli. 1992. The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication. Cell 71:277-288.
-
(1992)
Cell
, vol.71
, pp. 277-288
-
-
Adams, D.E.1
Shektman, E.M.2
Zechiedrich, E.L.3
Schmid, M.B.4
Cozzarelli, N.R.5
-
9
-
-
0026784978
-
Cre-lox recombination in Escherichia coli cells. Mechanistic differences from the in vitro reaction
-
Adams, D. E., J. B. Bliska, and N. R. Cozzarelli. 1992. Cre-lox recombination in Escherichia coli cells. Mechanistic differences from the in vitro reaction. J. Mol. Biol. 226:661-673.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 661-673
-
-
Adams, D.E.1
Bliska, J.B.2
Cozzarelli, N.R.3
-
10
-
-
0023722240
-
Functional analysis of the leading strand replication origin of plasmid pUB110 in Bacillus subtilis
-
Alonso, J. C., H. Leonhardt, and C. Stiege. 1988. Functional analysis of the leading strand replication origin of plasmid pUB110 in Bacillus subtilis. Nucleic Acids Res. 16:9127-9145.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 9127-9145
-
-
Alonso, J.C.1
Leonhardt, H.2
Stiege, C.3
-
11
-
-
0023506894
-
Initiation of plasmid pC194 replication and its control in Bacillus subtilis
-
Alonso, J. C., and R. H. Taylor. 1987. Initiation of plasmid pC194 replication and its control in Bacillus subtilis. Mol. Gen. Genet. 210:476-484.
-
(1987)
Mol. Gen. Genet.
, vol.210
, pp. 476-484
-
-
Alonso, J.C.1
Taylor, R.H.2
-
12
-
-
0025129122
-
Partition-mediated incompatibility of bacterial plasmids
-
Austin, S. J., and K. Nordström. 1990. Partition-mediated incompatibility of bacterial plasmids. Cell 60:351-354.
-
(1990)
Cell
, vol.60
, pp. 351-354
-
-
Austin, S.J.1
Nordström, K.2
-
14
-
-
0028952966
-
Replication arrest
-
Baker, T. A. 1995. Replication arrest. Cell 80:521-524.
-
(1995)
Cell
, vol.80
, pp. 521-524
-
-
Baker, T.A.1
-
15
-
-
0024583631
-
Plasmid structural instability associated with pC194 replication functions
-
Ballester, S., P. López, M. Espinosa, J. C. Alonso, and S. A. Lacks. 1989. Plasmid structural instability associated with pC194 replication functions. J. Bacteriol. 171:2271-2277.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 2271-2277
-
-
Ballester, S.1
López, P.2
Espinosa, M.3
Alonso, J.C.4
Lacks, S.A.5
-
16
-
-
0027197409
-
Measurement of gene expression by translational coupling: Effect of copy mutations on pT181 initiator synthesis
-
Bargonetti, J., P. Z. Wang, and R. P. Novick. 1993. Measurement of gene expression by translational coupling: effect of copy mutations on pT181 initiator synthesis. EMBO J. 12:3659-3667.
-
(1993)
EMBO J.
, vol.12
, pp. 3659-3667
-
-
Bargonetti, J.1
Wang, P.Z.2
Novick, R.P.3
-
17
-
-
2642705897
-
-
Personal communication
-
Bastia, D. Personal communication.
-
-
-
Bastia, D.1
-
18
-
-
0019497716
-
The nucleotide sequence surrounding the replication terminus of R6K
-
Bastia, D., J. Germino, J. Crossa, and J. Ram. 1981. The nucleotide sequence surrounding the replication terminus of R6K. Proc. Natl. Acad. Sci. USA 78:2095-2099.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 2095-2099
-
-
Bastia, D.1
Germino, J.2
Crossa, J.3
Ram, J.4
-
19
-
-
0019407854
-
Molecular cloning of the replication terminus of the plasmid R6K
-
Bastia, D., J. Germino, J. Crossa, and P. Hale. 1981. Molecular cloning of the replication terminus of the plasmid R6K. Gene 14:81-89.
-
(1981)
Gene
, vol.14
, pp. 81-89
-
-
Bastia, D.1
Germino, J.2
Crossa, J.3
Hale, P.4
-
20
-
-
0002844816
-
Mechanisms for completing DNA replication
-
M. L. DePanphilis (ed.) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Bastia, D., and B. K. Mohanthy. 1996. Mechanisms for completing DNA replication, p. 177-215. In M. L. DePanphilis (ed.), DNA replication in eukaryotic cells. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1996)
DNA Replication in Eukaryotic Cells
, pp. 177-215
-
-
Bastia, D.1
Mohanthy, B.K.2
-
21
-
-
0026062407
-
The Escherichia coli cell cycle and the plasmid R1 replication cycle in the absence of DnaA protein
-
Bernander, R., S. DasGupta, and K. Nordström. 1991. The Escherichia coli cell cycle and the plasmid R1 replication cycle in the absence of DnaA protein. Cell 64:1145-1153.
-
(1991)
Cell
, vol.64
, pp. 1145-1153
-
-
Bernander, R.1
DasGupta, S.2
Nordström, K.3
-
22
-
-
0026489908
-
Mapping of the in vivo start site for leading strand DNA synthesis in plasmid R1
-
Bernander, R., M. Krabbe, and K. Nordström. 1992. Mapping of the in vivo start site for leading strand DNA synthesis in plasmid R1. EMBO J. 11: 4481-4487.
-
(1992)
EMBO J.
, vol.11
, pp. 4481-4487
-
-
Bernander, R.1
Krabbe, M.2
Nordström, K.3
-
23
-
-
0027216608
-
Mutation in the plasmid pUB110 Rep protein affects termination of rolling circle replication
-
Bidnenko, V. E., A. Gruss, and S. D. Ehrlich. 1993. Mutation in the plasmid pUB110 Rep protein affects termination of rolling circle replication. J. Bacteriol. 175:5611-5616.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 5611-5616
-
-
Bidnenko, V.E.1
Gruss, A.2
Ehrlich, S.D.3
-
24
-
-
0026513217
-
Replication of single-stranded plasmid pT181 DNA in vitro
-
Birch, P., and S. Khan. 1992. Replication of single-stranded plasmid pT181 DNA in vitro. Proc. Natl. Acad. Sci. USA 89:290-294.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 290-294
-
-
Birch, P.1
Khan, S.2
-
25
-
-
0017798537
-
Ribonucleotide-deoxyribonucleotide linkages at the origin of DNA replication of colicin E1 plasmid
-
Bird, R. E., and J. Tomizawa. 1978. Ribonucleotide-deoxyribonucleotide linkages at the origin of DNA replication of colicin E1 plasmid. J. Mol. Biol. 120:137-143.
-
(1978)
J. Mol. Biol.
, vol.120
, pp. 137-143
-
-
Bird, R.E.1
Tomizawa, J.2
-
26
-
-
0025369028
-
Control of replication of plasmid R1: The duplex between the antisense RNA, CopA, and its target, CopT, is processed specifically in vivo and in vitro by RNase III
-
Blomberg, P., E. G. H. Wagner, and K. Nordström. 1990. Control of replication of plasmid R1: the duplex between the antisense RNA, CopA, and its target, CopT, is processed specifically in vivo and in vitro by RNase III. EMBO J. 9:2331-2340.
-
(1990)
EMBO J.
, vol.9
, pp. 2331-2340
-
-
Blomberg, P.1
Wagner, E.G.H.2
Nordström, K.3
-
27
-
-
0026628291
-
Replication control of plasmid R1: RepA synthesis is regulated by CopA RNA through inhibition of leader peptide translation
-
Blomberg, P., K. Nordström, and E. G. H. Wagner. 1992. Replication control of plasmid R1: RepA synthesis is regulated by CopA RNA through inhibition of leader peptide translation. EMBO J. 11:2675-2683.
-
(1992)
EMBO J.
, vol.11
, pp. 2675-2683
-
-
Blomberg, P.1
Nordström, K.2
Wagner, E.G.H.3
-
28
-
-
0024474533
-
Replication origins of single-stranded-DNA plasmid pUB110
-
Boe, L., M.-F. Gros, H. te Riele, S. D. Ehrlich, and A. Gruss. 1989. Replication origins of single-stranded-DNA plasmid pUB110. J. Bacteriol. 171: 3366-3372.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 3366-3372
-
-
Boe, L.1
Gros, M.-F.2
Te Riele, H.3
Ehrlich, S.D.4
Gruss, A.5
-
29
-
-
0019823843
-
Rifampicin-resistant initiation of DNA synthesis on the isolated strands of ColE1 plasmid DNA
-
Böldicke, T. W., E. Lanka, and W. L. Staudenbauer. 1981. Rifampicin-resistant initiation of DNA synthesis on the isolated strands of ColE1 plasmid DNA. Nucleic Acids Res. 20:5215-5231.
-
(1981)
Nucleic Acids Res.
, vol.20
, pp. 5215-5231
-
-
Böldicke, T.W.1
Lanka, E.2
Staudenbauer, W.L.3
-
30
-
-
85039895341
-
Ampicillin-resistant derivatives of the plasmid pMB9: Construction and characterization of new cloning vehicles. I
-
Bolivar, F., R. I. Rodriguez, M. C. Betlach, and H. W. Boyer. 1977. Ampicillin-resistant derivatives of the plasmid pMB9: construction and characterization of new cloning vehicles. I. Proc. Natl. Acad. Sci. USA 74:5265-5269.
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 5265-5269
-
-
Bolivar, F.1
Rodriguez, R.I.2
Betlach, M.C.3
Boyer, H.W.4
-
31
-
-
0023766613
-
A model for initiation at origins of DNA replication
-
Bramhill, D., and A. Kornberg. 1988. A model for initiation at origins of DNA replication. Cell 54:915-918.
-
(1988)
Cell
, vol.54
, pp. 915-918
-
-
Bramhill, D.1
Kornberg, A.2
-
32
-
-
0027945225
-
The copR gene product of plasmid pIP501 acts as a transcriptional repressor at the essential repR promoter
-
Brantl, S. 1994. The copR gene product of plasmid pIP501 acts as a transcriptional repressor at the essential repR promoter. Mol. Microbiol. 14: 473-483.
-
(1994)
Mol. Microbiol.
, vol.14
, pp. 473-483
-
-
Brantl, S.1
-
33
-
-
0025035309
-
Molecular analysis of the replication region of the conjugative Streptococcus agalactiae plasmid pIP501 in Bacillus subtilis. Comparison with plasmids pAMβ1 and pSM19035
-
Brantl, S., D. Behnke, and J. C. Alonso. 1990. Molecular analysis of the replication region of the conjugative Streptococcus agalactiae plasmid pIP501 in Bacillus subtilis. Comparison with plasmids pAMβ1 and pSM19035. Nucleic Acids Res. 18:4783-4789.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 4783-4789
-
-
Brantl, S.1
Behnke, D.2
Alonso, J.C.3
-
34
-
-
0027313333
-
Rep protein expression on plasmid pIP501 is controlled by an antisense RNA-mediated transcription attenuation mechanism
-
Brantl, S., E. Birch-Hirschfeld, and D. Behnke. 1993. Rep protein expression on plasmid pIP501 is controlled by an antisense RNA-mediated transcription attenuation mechanism. J. Bacteriol. 175:4052-4061.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 4052-4061
-
-
Brantl, S.1
Birch-Hirschfeld, E.2
Behnke, D.3
-
35
-
-
0027932830
-
Antisense RNA-mediated transcriptional attenuation occurs faster than stable antisense/target RNA pairing: An in vitro study of plasmid pIP501
-
Brantl, S., and E. G. H. Wagner. 1994. Antisense RNA-mediated transcriptional attenuation occurs faster than stable antisense/target RNA pairing: an in vitro study of plasmid pIP501. EMBO J. 13:3599-3607.
-
(1994)
EMBO J.
, vol.13
, pp. 3599-3607
-
-
Brantl, S.1
Wagner, E.G.H.2
-
36
-
-
0030006258
-
An unusually long-lived antisense RNA in plasmid copy number control: In vivo RNAs encoded by the streptococcal plasmid pIP501
-
Brantl, S., and E. G. H. Wagner. 1996. An unusually long-lived antisense RNA in plasmid copy number control: in vivo RNAs encoded by the streptococcal plasmid pIP501. J. Mol. Biol. 255:275-238.
-
(1996)
J. Mol. Biol.
, vol.255
, pp. 275-1238
-
-
Brantl, S.1
Wagner, E.G.H.2
-
37
-
-
0025911857
-
Critical sequences in the core of the P1 plasmid replication origin
-
Brendler, T., A. Abeles, and S. J. Austin. 1991. Critical sequences in the core of the P1 plasmid replication origin. J. Bacteriol. 173:3935-3942.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 3935-3942
-
-
Brendler, T.1
Abeles, A.2
Austin, S.J.3
-
38
-
-
0029081531
-
A protein that binds to the P1 origin core and the oriC 13mer region in a methylation-specific fashion is the product of the host seqA gene
-
Brendler, T., A. Abeles, and S. J. Austin. 1995. A protein that binds to the P1 origin core and the oriC 13mer region in a methylation-specific fashion is the product of the host seqA gene. EMBO J. 14:4083-4089.
-
(1995)
EMBO J.
, vol.14
, pp. 4083-4089
-
-
Brendler, T.1
Abeles, A.2
Austin, S.J.3
-
39
-
-
0025816828
-
Unique sequence requirements for the P1 plasmid replication origin
-
Brendler, T. G., A. L. Abeles, L. D. Reaves, and S. J. Austin. 1991. Unique sequence requirements for the P1 plasmid replication origin. Res. Microbiol. 142:209-216.
-
(1991)
Res. Microbiol.
, vol.142
, pp. 209-216
-
-
Brendler, T.G.1
Abeles, A.L.2
Reaves, L.D.3
Austin, S.J.4
-
40
-
-
0024571640
-
The helix-turn-helix DNA-binding motif
-
Brennan, R. G., and B. W. Matthews. 1989. The helix-turn-helix DNA-binding motif. J. Biol. Chem. 264:1903-1906.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 1903-1906
-
-
Brennan, R.G.1
Matthews, B.W.2
-
41
-
-
0025734214
-
Unidirectional replication of the structurally stable Enterococcus faecalis plasmid pAMβ1
-
Bruand, C., S. D. Ehrlich, and L. Jannière. 1991. Unidirectional replication of the structurally stable Enterococcus faecalis plasmid pAMβ1. EMBO J. 10:2171-2177.
-
(1991)
EMBO J.
, vol.10
, pp. 2171-2177
-
-
Bruand, C.1
Ehrlich, S.D.2
Jannière, L.3
-
42
-
-
0027131875
-
A fourth class of theta-replicating plasmids: The pAMβ1 family from Gram-positive bacteria
-
Bruand, C., E. Le Chatelier, S. D. Ehrlich, and L. Jannière. 1993. A fourth class of theta-replicating plasmids: the pAMβ1 family from Gram-positive bacteria. Proc. Natl. Acad. Sci. USA 90:11668-11672.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 11668-11672
-
-
Bruand, C.1
Le Chatelier, E.2
Ehrlich, S.D.3
Jannière, L.4
-
43
-
-
0029003406
-
Primosome assembly site in Bacillus subtilis
-
Bruand, C., S. D. Ehrlich, and L. Jannière. 1995. Primosome assembly site in Bacillus subtilis. EMBO J. 14:2642-2650.
-
(1995)
EMBO J.
, vol.14
, pp. 2642-2650
-
-
Bruand, C.1
Ehrlich, S.D.2
Jannière, L.3
-
44
-
-
0028918469
-
Crystal structure of the replication terminator protein from Bacillus subtilis at 2.6 A
-
Bussiere, D. E., D. Bastia, and S. White. 1995. Crystal structure of the replication terminator protein from Bacillus subtilis at 2.6 A. Cell 80:651-660.
-
(1995)
Cell
, vol.80
, pp. 651-660
-
-
Bussiere, D.E.1
Bastia, D.2
White, S.3
-
45
-
-
0021508776
-
Control of pT181 replication. II. Mutational analysis
-
Carleton, S. M., S. J. Projan, S. K. Highlander, S. M. Moghazeh, and R. P. Novick. 1984. Control of pT181 replication. II. Mutational analysis. EMBO J. 3:2407-2414.
-
(1984)
EMBO J.
, vol.3
, pp. 2407-2414
-
-
Carleton, S.M.1
Projan, S.J.2
Highlander, S.K.3
Moghazeh, S.M.4
Novick, R.P.5
-
46
-
-
0027362078
-
Essentiality of the three carboxyl-terminal amino acids of the plasmid RK2 replication initiation protein TrfA for DNA binding and replication activity in gram-negative bacteria
-
Cereghino, J. L., and D. R. Helinski. 1993. Essentiality of the three carboxyl-terminal amino acids of the plasmid RK2 replication initiation protein TrfA for DNA binding and replication activity in gram-negative bacteria. J. Biol. Chem. 33:24926-24933.
-
(1993)
J. Biol. Chem.
, vol.33
, pp. 24926-24933
-
-
Cereghino, J.L.1
Helinski, D.R.2
-
47
-
-
0028036180
-
Isolation and characterization of DNA-binding mutants of a plasmid replication initiation protein utilizing an in vivo binding assay
-
Cereghino, J. L., D. R. Helinski, and A. E. Toukdarian. 1994. Isolation and characterization of DNA-binding mutants of a plasmid replication initiation protein utilizing an in vivo binding assay. Plasmid 31:89-99.
-
(1994)
Plasmid
, vol.31
, pp. 89-99
-
-
Cereghino, J.L.1
Helinski, D.R.2
Toukdarian, A.E.3
-
49
-
-
0027930540
-
Bidirectional replication from an internal origin in a linear streptomyces plasmid
-
Chang, P. C., and S. N. Cohen. 1994. Bidirectional replication from an internal origin in a linear streptomyces plasmid. Science 265:952-954.
-
(1994)
Science
, vol.265
, pp. 952-954
-
-
Chang, P.C.1
Cohen, S.N.2
-
50
-
-
0024297566
-
Mini-P1 plasmid replication: The autoregulation-sequestration paradox
-
Chattoraj, D. K., R. J. Mason, and S. H. Wickner. 1988. Mini-P1 plasmid replication: the autoregulation-sequestration paradox. Cell 52:551-557.
-
(1988)
Cell
, vol.52
, pp. 551-557
-
-
Chattoraj, D.K.1
Mason, R.J.2
Wickner, S.H.3
-
51
-
-
0030072618
-
Dissociation kinetics of RepA dimers: Implications for mechanisms of activation of DNA binding by chaperones
-
Chattoraj, D. K., R. Ghirlando, K. Park, J. A. Dibbens, and M. S. Lewis. 1996. Dissociation kinetics of RepA dimers: implications for mechanisms of activation of DNA binding by chaperones. Genes Cells 1:189-199.
-
(1996)
Genes Cells
, vol.1
, pp. 189-199
-
-
Chattoraj, D.K.1
Ghirlando, R.2
Park, K.3
Dibbens, J.A.4
Lewis, M.S.5
-
52
-
-
0030634073
-
Replication control of plasmid P1 and its host chromosome: The common ground
-
Chattoraj, D. K., and T. D. Schneider. 1997. Replication control of plasmid P1 and its host chromosome: the common ground. Prog. Nucleic Acid Res. Mol. Biol. 57:145-186.
-
(1997)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.57
, pp. 145-186
-
-
Chattoraj, D.K.1
Schneider, T.D.2
-
53
-
-
0021112498
-
The nucleotide sequence of replication and maintenance functions encoded by plasmid pSC101
-
Churchward, G., P. Linder, and L. Caro. 1983. The nucleotide sequence of replication and maintenance functions encoded by plasmid pSC101. Nucleic Acids Res. 11:5645-5659.
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 5645-5659
-
-
Churchward, G.1
Linder, P.2
Caro, L.3
-
54
-
-
0028901438
-
Effects of the pSC101 partition (par) locus on in vivo DNA supercoiling near the plasmid replication origin
-
Conley, D. L., and S. N. Cohen. 1995. Effects of the pSC101 partition (par) locus on in vivo DNA supercoiling near the plasmid replication origin. Nucleic Acids Res. 23:701-707.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 701-707
-
-
Conley, D.L.1
Cohen, S.N.2
-
55
-
-
0028872251
-
Isolation and characterization of plasmid mutations that enable partitioning of pSC101 replicons lacking the partition (par) locus
-
Conley, D. L., and S. N. Cohen. 1995. Isolation and characterization of plasmid mutations that enable partitioning of pSC101 replicons lacking the partition (par) locus. J. Bacteriol. 177:1086-1089.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1086-1089
-
-
Conley, D.L.1
Cohen, S.N.2
-
57
-
-
0022588327
-
Analysis of the vegetative replication origin of broad-host-range plasmid RK2 by transposon mutagenesis
-
Cross, M. A., S. R. Warne, and C. M. Thomas. 1986. Analysis of the vegetative replication origin of broad-host-range plasmid RK2 by transposon mutagenesis. Plasmid 15:136-146.
-
(1986)
Plasmid
, vol.15
, pp. 136-146
-
-
Cross, M.A.1
Warne, S.R.2
Thomas, C.M.3
-
58
-
-
0023663897
-
Multiple mechanisms for initiation of ColE1 DNA replication: DNA synthesis in the presence and absence of ribonuclease H
-
DasGupta, S., H. Masukata, and J. I. Tomizawa. 1987. Multiple mechanisms for initiation of ColE1 DNA replication: DNA synthesis in the presence and absence of ribonuclease H. Cell 51:1113-1122.
-
(1987)
Cell
, vol.51
, pp. 1113-1122
-
-
DasGupta, S.1
Masukata, H.2
Tomizawa, J.I.3
-
59
-
-
0027181542
-
Activation of DNA binding by the monomeric form of the P1 replication initiator RepA by heat shock proteins DnaJ and DnaK
-
DasGupta, S., G. Mukhopadhyay, P. P. Papp, M. S. Lewis, and D. K. Chattoraj. 1993. Activation of DNA binding by the monomeric form of the P1 replication initiator RepA by heat shock proteins DnaJ and DnaK. J. Mol. Biol. 232:23-34.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 23-34
-
-
DasGupta, S.1
Mukhopadhyay, G.2
Papp, P.P.3
Lewis, M.S.4
Chattoraj, D.K.5
-
60
-
-
0017806122
-
Replication of the nonconjugative plasmid RSF1010 in Escherichia coli K-12
-
de Graaff, J., J. H. Crosa, F. Heffron, and S. Falkow. 1978. Replication of the nonconjugative plasmid RSF1010 in Escherichia coli K-12. J. Bacteriol. 134:1117-1122.
-
(1978)
J. Bacteriol.
, vol.134
, pp. 1117-1122
-
-
De Graaff, J.1
Crosa, J.H.2
Heffron, F.3
Falkow, S.4
-
61
-
-
0025310365
-
Initiation of replication of plasmid pLS1. The initiator protein RepB acts on two distant DNA regions
-
de la Campa, A. G., G. del Solar, and M. Espinosa. 1990. Initiation of replication of plasmid pLS1. The initiator protein RepB acts on two distant DNA regions. J. Mol. Biol. 213:247-262.
-
(1990)
J. Mol. Biol.
, vol.213
, pp. 247-262
-
-
De La Campa, A.G.1
Del Solar, G.2
Espinosa, M.3
-
62
-
-
0025965115
-
Integration host factor of Escherichia coli reverses the inhibition of R6K plasmid replication by pi initiator protein
-
Dellis, S., and M. Filutowicz. 1991. Integration host factor of Escherichia coli reverses the inhibition of R6K plasmid replication by pi initiator protein. J. Bacteriol. 173:1279-1286.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 1279-1286
-
-
Dellis, S.1
Filutowicz, M.2
-
63
-
-
0026454456
-
Two alternative structures can be formed by IHF protein binding to the plasmid R6K gamma origin
-
Dellis, S., T. Schatz, K. Rutlin, R. B. Inman, and M. Filutowicz. 1992. Two alternative structures can be formed by IHF protein binding to the plasmid R6K gamma origin. J. Biol. Chem. 267:24426-24432.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 24426-24432
-
-
Dellis, S.1
Schatz, T.2
Rutlin, K.3
Inman, R.B.4
Filutowicz, M.5
-
64
-
-
2642620250
-
-
Unpublished data
-
del Solar, G. Unpublished data.
-
-
-
Del Solar, G.1
-
65
-
-
0023122348
-
Replication of the streptococcal plasmid pMV158 and derivatives in cell-free extracts of Escherichia coli
-
del Solar, G., R. Díaz, and M. Espinosa. 1987. Replication of the streptococcal plasmid pMV158 and derivatives in cell-free extracts of Escherichia coli. Mol. Gen. Genet. 206:428-435.
-
(1987)
Mol. Gen. Genet.
, vol.206
, pp. 428-435
-
-
Del Solar, G.1
Díaz, R.2
Espinosa, M.3
-
66
-
-
0023663647
-
Initiation signals for the conversion of single stranded to double stranded DNA forms in the streptococcal plasmid pLS1
-
del Solar, G., A. Puyet, and M. Espinosa. 1987. Initiation signals for the conversion of single stranded to double stranded DNA forms in the streptococcal plasmid pLS1. Nucleic Acids Res. 15:5561-5580.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 5561-5580
-
-
Del Solar, G.1
Puyet, A.2
Espinosa, M.3
-
67
-
-
0024602105
-
Purification and characterization of RepA, a protein involved in the copy number control of plasmid pLS1
-
del Solar, G., A. G. de la Campa, J. Pérez-Martín, T. Choli, and M. Espinosa. 1989. Purification and characterization of RepA, a protein involved in the copy number control of plasmid pLS1. Nucleic Acids Res. 17:2405-2420.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 2405-2420
-
-
Del Solar, G.1
De La Campa, A.G.2
Pérez-Martín, J.3
Choli, T.4
Espinosa, M.5
-
68
-
-
0026502191
-
The copy number of plasmid pLS1 is regulated by two trans-acting plasmid products: The antisense RNA II and the repressor protein RepA
-
del Solar, G., and M. Espinosa. 1992. The copy number of plasmid pLS1 is regulated by two trans-acting plasmid products: the antisense RNA II and the repressor protein RepA. Mol. Microbiol. 6:83-94.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 83-94
-
-
Del Solar, G.1
Espinosa, M.2
-
69
-
-
0027445013
-
Replication of the promiscuous plasmid pLS1: A region encompassing the minus origin of replication is associated with stable plasmid inheritance
-
del Solar, G., G. Kramer, S. Ballester, and M. Espinosa. 1993. Replication of the promiscuous plasmid pLS1: a region encompassing the minus origin of replication is associated with stable plasmid inheritance. Mol. Gen. Genet. 241:97-105.
-
(1993)
Mol. Gen. Genet.
, vol.241
, pp. 97-105
-
-
Del Solar, G.1
Kramer, G.2
Ballester, S.3
Espinosa, M.4
-
70
-
-
0027213363
-
Rolling circle-replicating plasmids from gram-positive and -negative bacteria: A wall falls
-
del Solar, G., M. Moscoso, and M. Espinosa. 1993. Rolling circle-replicating plasmids from gram-positive and -negative bacteria: a wall falls. Mol. Microbiol. 8:789-796.
-
(1993)
Mol. Microbiol.
, vol.8
, pp. 789-796
-
-
Del Solar, G.1
Moscoso, M.2
Espinosa, M.3
-
71
-
-
0027509761
-
In vivo definition of the functional origin of replication (ori(+)) of the promiscuous plasmid pLS1
-
del Solar, G., M. Moscoso, and M. Espinosa. 1993. In vivo definition of the functional origin of replication (ori(+)) of the promiscuous plasmid pLS1. Mol. Gen. Genet. 237:65-72.
-
(1993)
Mol. Gen. Genet.
, vol.237
, pp. 65-72
-
-
Del Solar, G.1
Moscoso, M.2
Espinosa, M.3
-
72
-
-
0029616072
-
Replication control of plasmid pLS1: Efficient regulation of plasmid copy number is exerted by the combined action of two plasmid components, CopG and RNA II
-
del Solar, G., P. Acebo, and M. Espinosa. 1995. Replication control of plasmid pLS1: efficient regulation of plasmid copy number is exerted by the combined action of two plasmid components, CopG and RNA II. Mol. Microbiol. 18:913-924.
-
(1995)
Mol. Microbiol.
, vol.18
, pp. 913-924
-
-
Del Solar, G.1
Acebo, P.2
Espinosa, M.3
-
73
-
-
0031034135
-
Replication control of plasmid pLS1: The antisense RNA II and the compact rnaII region are involved in translational regulation of the initiator RepB synthesis
-
del Solar, G., P. Acebo, and M. Espinosa. 1997. Replication control of plasmid pLS1: the antisense RNA II and the compact rnaII region are involved in translational regulation of the initiator RepB synthesis. Mol. Microbiol. 23:95-108.
-
(1997)
Mol. Microbiol.
, vol.23
, pp. 95-108
-
-
Del Solar, G.1
Acebo, P.2
Espinosa, M.3
-
74
-
-
0026480603
-
Six amino acids determine the sequence-specific DNA binding and replication specificity of the initiator proteins of the pT181 family
-
Dempsey, L. A., P. Birch, and S. A. Khan. 1992. Six amino acids determine the sequence-specific DNA binding and replication specificity of the initiator proteins of the pT181 family. J. Biol. Chem. 267:24538-24543.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 24538-24543
-
-
Dempsey, L.A.1
Birch, P.2
Khan, S.A.3
-
75
-
-
0026598266
-
Uncoupling of the DNA topoisomerase and replication activities of an initiator protein
-
Dempsey, L. A., P. Birch, and S. A. Khan. 1992. Uncoupling of the DNA topoisomerase and replication activities of an initiator protein. Proc. Natl. Acad. Sci. USA 89:3083-3087.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 3083-3087
-
-
Dempsey, L.A.1
Birch, P.2
Khan, S.A.3
-
76
-
-
0028926147
-
Localization of the start sites of lagging-strand replication of rolling-circle plasmids from gram-positive bacteria
-
Dempsey, L. A., A. C. Zhao, and S. A. Khan. 1995. Localization of the start sites of lagging-strand replication of rolling-circle plasmids from gram-positive bacteria. Mol. Microbiol. 15:679-687.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 679-687
-
-
Dempsey, L.A.1
Zhao, A.C.2
Khan, S.A.3
-
77
-
-
0024615876
-
Replication and segregational stability of the Bacillus plasmid pBAA1
-
Devine, K. M., S. T. Hogan, D. G. Higgins, and D. J. McConnell. 1989. Replication and segregational stability of the Bacillus plasmid pBAA1. J. Bacteriol. 171:1166-1172.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 1166-1172
-
-
Devine, K.M.1
Hogan, S.T.2
Higgins, D.G.3
McConnell, D.J.4
-
78
-
-
0028149677
-
Multiple roles for DNA polymerase I in establishment and replication of the promiscuous plasmid pLS1
-
Díaz, A., S. A. Lacks, and P. López. 1994. Multiple roles for DNA polymerase I in establishment and replication of the promiscuous plasmid pLS1. Mol. Microbiol. 14:773-783.
-
(1994)
Mol. Microbiol.
, vol.14
, pp. 773-783
-
-
Díaz, A.1
Lacks, S.A.2
López, P.3
-
79
-
-
0019349599
-
Plasmid R1 DNA replication dependent on protein synthesis in cell-free extracts of E. coli
-
Díaz, R., K. Nordström, and W. L. Staudenbauer. 1981. Plasmid R1 DNA replication dependent on protein synthesis in cell-free extracts of E. coli. Nature 289:326-328.
-
(1981)
Nature
, vol.289
, pp. 326-328
-
-
Díaz, R.1
Nordström, K.2
Staudenbauer, W.L.3
-
80
-
-
0020267592
-
Origin and direction of mini-R1 plasmid DNA replication in cell extracts of Escherichia coli
-
Díaz, R., and W. L. Staudenbauer. 1982. Origin and direction of mini-R1 plasmid DNA replication in cell extracts of Escherichia coli. J. Bacteriol. 150:1077-1084.
-
(1982)
J. Bacteriol.
, vol.150
, pp. 1077-1084
-
-
Díaz, R.1
Staudenbauer, W.L.2
-
81
-
-
0030830077
-
Chaperone-mediated reduction of RepA dimerization is associated with RepA conformational change
-
78a. Dibbens, J. A., K. Muraiso, and D. K. Chattoraj. 1997. Chaperone-mediated reduction of RepA dimerization is associated with RepA conformational change. Mol. Microbiol. 26:185-195.
-
(1997)
Mol. Microbiol.
, vol.26
, pp. 185-195
-
-
Dibbens, J.A.1
Muraiso, K.2
Chattoraj, D.K.3
-
82
-
-
0024616918
-
DNA bending near the replication origin of Inc FII plasmid NR1
-
Dong, X., K. P. Rovillard, D. D. Womble, and R. H. Rownd. 1989. DNA bending near the replication origin of Inc FII plasmid NR1. J. Bacteriol. 171:703-707.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 703-707
-
-
Dong, X.1
Rovillard, K.P.2
Womble, D.D.3
Rownd, R.H.4
-
84
-
-
0032478710
-
Replication origin of the broad host range plasmid RK2: Positioning of various motifs is critical for initiation of replication
-
in press
-
Doran, K. S., I. Konieczny, and D. R. Helinski. Replication origin of the broad host range plasmid RK2: positioning of various motifs is critical for initiation of replication. J. Biol. Chem., in press.
-
J. Biol. Chem.
-
-
Doran, K.S.1
Konieczny, I.2
Helinski, D.R.3
-
85
-
-
0023405209
-
The sequence encoding the 43-kilodalton trfA protein is required for efficient replication or maintenance of minimal RK2 replicons in Pseudomonas aeruginosa
-
Durland, R. H., and D. R. Helinski. 1987. The sequence encoding the 43-kilodalton trfA protein is required for efficient replication or maintenance of minimal RK2 replicons in Pseudomonas aeruginosa. Plasmid 18: 164-169.
-
(1987)
Plasmid
, vol.18
, pp. 164-169
-
-
Durland, R.H.1
Helinski, D.R.2
-
86
-
-
0025308614
-
Conserved DNA structures in origins of replication
-
Eckdahl, T. T., and J. N. Anderson. 1990. Conserved DNA structures in origins of replication. Nucleic Acids Res. 18:1609-1612.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 1609-1612
-
-
Eckdahl, T.T.1
Anderson, J.N.2
-
88
-
-
0029941581
-
Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: Evidence for rolling-circle replication in a hyperthermophile
-
Erauso, G., S. Marsin, N. Benbouzid-Rollet, M. F. Baucher, T. Barbeyron, Y. Zivanovic, D. Prieur, and P. Fonterre. 1996. Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: evidence for rolling-circle replication in a hyperthermophile. J. Bacteriol. 178:3232-3237.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 3232-3237
-
-
Erauso, G.1
Marsin, S.2
Benbouzid-Rollet, N.3
Baucher, M.F.4
Barbeyron, T.5
Zivanovic, Y.6
Prieur, D.7
Fonterre, P.8
-
89
-
-
0029096104
-
Plasmid rolling circle replication and its control
-
Espinosa, M., G. del Solar, F. Rojo, and J. C. Alonso. 1995. Plasmid rolling circle replication and its control. FEMS Microbiol. Lett. 130:111-120.
-
(1995)
FEMS Microbiol. Lett.
, vol.130
, pp. 111-120
-
-
Espinosa, M.1
Del Solar, G.2
Rojo, F.3
Alonso, J.C.4
-
90
-
-
0029125210
-
Host growth temperature and a conservative amino acid substitution in the replication protein of pPS10 influence plasmid host range
-
Fernández-Tresguerres, M. E., M. Martín, D. García de Viedma, R. Giraldo, and R. Díaz-Orejas. 1995. Host growth temperature and a conservative amino acid substitution in the replication protein of pPS10 influence plasmid host range. J. Bacteriol. 177:4377-4384.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4377-4384
-
-
Fernández-Tresguerres, M.E.1
Martín, M.2
García De Viedma, D.3
Giraldo, R.4
Díaz-Orejas, R.5
-
91
-
-
0022477618
-
Binding of purified wild-type and mutant Pi initiation proteins to a replication origin region of plasmid R6K
-
Filutowicz, M., E. Uhlenhopp, and D. R. Helinski. 1985. Binding of purified wild-type and mutant Pi initiation proteins to a replication origin region of plasmid R6K. J. Mol. Biol. 187:225-239.
-
(1985)
J. Mol. Biol.
, vol.187
, pp. 225-239
-
-
Filutowicz, M.1
Uhlenhopp, E.2
Helinski, D.R.3
-
92
-
-
0027947891
-
Regulation of replication in an iteron-containing DNA molecule
-
Filutowicz, M., S. Dellis, I. Levchenko, M. Urh, F. Wu, and D. York. 1994. Regulation of replication in an iteron-containing DNA molecule. Prog. Nucleic Acid Res. Mol. Biol. 68:239-273.
-
(1994)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.68
, pp. 239-273
-
-
Filutowicz, M.1
Dellis, S.2
Levchenko, I.3
Urh, M.4
Wu, F.5
York, D.6
-
93
-
-
0022868961
-
Positive and negative roles of an initiator protein at an origin of replication
-
Filutowicz, M., M. J. MacEachern, and D. R. Helinski. 1986. Positive and negative roles of an initiator protein at an origin of replication. Proc. Natl. Acad. Sci. USA 83:9645-9649.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 9645-9649
-
-
Filutowicz, M.1
MacEachern, M.J.2
Helinski, D.R.3
-
94
-
-
0029976305
-
Three novel plasmid R6K proteins act in concert to distort DNA within the alpha and beta origins of DNA replication
-
Flashner, Y., J. Shlomai, and A. Shafferman. 1996. Three novel plasmid R6K proteins act in concert to distort DNA within the alpha and beta origins of DNA replication. Mol. Microbiol. 19:985-996.
-
(1996)
Mol. Microbiol.
, vol.19
, pp. 985-996
-
-
Flashner, Y.1
Shlomai, J.2
Shafferman, A.3
-
95
-
-
0003079832
-
The molecular biology of IncQ plasmids
-
C. M. Thomas (ed.) Academic Press, Ltd., London, United Kingdom
-
Frey, J., and M. Bagdasarian. 1989. The molecular biology of IncQ plasmids, p. 79-94. In C. M. Thomas (ed.), Promiscuous plasmids of Gram-negative bacteria. Academic Press, Ltd., London, United Kingdom.
-
(1989)
Promiscuous Plasmids of Gram-negative Bacteria
, pp. 79-94
-
-
Frey, J.1
Bagdasarian, M.2
-
96
-
-
0022618799
-
Replication of pSC101: Effects of mutations in the E. coli DNA binding protein IHF
-
Gamas, P., A. C. Burger, G. Churchward, L. Caro, D. Galas, and M. Chandler. 1986. Replication of pSC101: effects of mutations in the E. coli DNA binding protein IHF. Mol. Gen. Genet. 204:85-89.
-
(1986)
Mol. Gen. Genet.
, vol.204
, pp. 85-89
-
-
Gamas, P.1
Burger, A.C.2
Churchward, G.3
Caro, L.4
Galas, D.5
Chandler, M.6
-
97
-
-
0028932707
-
Transcription of repA, the gene of the initiation protein of the Pseudomonas plasmid pPS10, is autoregulated by interactions of the RepA protein at a symmetrical operator
-
García de Viedma, D., R. Giraldo, M. J. Ruiz-Echevarria, R. Lurz, and R. Diaz-Orejas. 1995. Transcription of repA, the gene of the initiation protein of the Pseudomonas plasmid pPS10, is autoregulated by interactions of the RepA protein at a symmetrical operator. J. Mol. Biol. 247:211-223.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 211-223
-
-
García De Viedma, D.1
Giraldo, R.2
Ruiz-Echevarria, M.J.3
Lurz, R.4
Diaz-Orejas, R.5
-
98
-
-
0004998729
-
Specific binding of the replication protein of plasmid pPS10 to direct and inverted repeats is mediated by an HTH motif
-
García de Viedma, D., A. Serraoo-Lopez, and R. Diaz-Orejas. 1995. Specific binding of the replication protein of plasmid pPS10 to direct and inverted repeats is mediated by an HTH motif. Nucleic Acids Res. 23:5048-5054.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 5048-5054
-
-
García De Viedma, D.1
Serraoo-Lopez, A.2
Diaz-Orejas, R.3
-
99
-
-
0030044215
-
A leucine zipper motif determines different functions in a DNA replication protein
-
García de Viedma, D., R. Giraldo, G. Rivas, E. Fernandez-Tresguerres, and R. Diaz-Orejas. 1996. A leucine zipper motif determines different functions in a DNA replication protein. EMBO J. 15:925-934.
-
(1996)
EMBO J.
, vol.15
, pp. 925-934
-
-
García De Viedma, D.1
Giraldo, R.2
Rivas, G.3
Fernandez-Tresguerres, E.4
Diaz-Orejas, R.5
-
101
-
-
0020365710
-
Primary structure of the replication initiation protein of plasmid R6K
-
Germino, J., and D. Bastia. 1982. Primary structure of the replication initiation protein of plasmid R6K Proc. Natl. Acad. Sci. USA 79:5475-5479.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 5475-5479
-
-
Germino, J.1
Bastia, D.2
-
102
-
-
0020697085
-
The replication initiator protein of plasmid R6K tagged with beta-galactosidase shows sequence-specific DNA-binding
-
Germino, J., and D. Bastia. 1983. The replication initiator protein of plasmid R6K tagged with beta-galactosidase shows sequence-specific DNA-binding. Cell 32:131-140.
-
(1983)
Cell
, vol.32
, pp. 131-140
-
-
Germino, J.1
Bastia, D.2
-
103
-
-
0020805574
-
Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA
-
Germino, J., and D. Bastia. 1983. Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA. Cell 34:125-134.
-
(1983)
Cell
, vol.34
, pp. 125-134
-
-
Germino, J.1
Bastia, D.2
-
104
-
-
0025958710
-
Characterization of a phage-plasmid hybrid (Phasyl) with two independent origins of replication isolated from Escherichia coli
-
Gielow, A., L. Diederich, and W. Messer. 1991. Characterization of a phage-plasmid hybrid (Phasyl) with two independent origins of replication isolated from Escherichia coli. J. Bacteriol. 173:73-79.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 73-79
-
-
Gielow, A.1
Diederich, L.2
Messer, W.3
-
105
-
-
2642642149
-
-
Unpublished data
-
Giraldo, R. Unpublished data.
-
-
-
Giraldo, R.1
-
106
-
-
0027080164
-
Differential binding of wild-type and mutant RepA protein to oriR sequence suggest a model for the initiation of plasmid R1 replication
-
Giraldo, R., and R. Díaz. 1992. Differential binding of wild-type and mutant RepA protein to oriR sequence suggest a model for the initiation of plasmid R1 replication. J. Mol. Biol. 228:787-802.
-
(1992)
J. Mol. Biol.
, vol.228
, pp. 787-802
-
-
Giraldo, R.1
Díaz, R.2
-
108
-
-
0024829661
-
Bacterial zipper
-
Giraldo, R., C. Nieto, M. E. Fernández-Tresguerres, and R. Díaz. 1989. Bacterial zipper. Nature 342:866.
-
(1989)
Nature
, vol.342
, pp. 866
-
-
Giraldo, R.1
Nieto, C.2
Fernández-Tresguerres, M.E.3
Díaz, R.4
-
109
-
-
0002417277
-
Mutations within the minimal replicon of plasmid pPS10 increase its host range
-
P. Hughes, E. Fanning, and M. Kohiyama (ed.) Springer-Verlag KG, Berlin, Germany
-
Giraldo, R., M. Martín, M. E. Fernández-Tresguerres, C. Nieto, and R. Díaz. 1992. Mutations within the minimal replicon of plasmid pPS10 increase its host range, p. 225-237. In P. Hughes, E. Fanning, and M. Kohiyama (ed.), DNA replication: the regulatory mechanisms. Springer-Verlag KG, Berlin, Germany.
-
(1992)
DNA Replication: The Regulatory Mechanisms
, pp. 225-237
-
-
Giraldo, R.1
Martín, M.2
Fernández-Tresguerres, M.E.3
Nieto, C.4
Díaz, R.5
-
110
-
-
0027378435
-
The heat-shock DnaK protein is required for plasmid R1 replication and it is dispensable for plasmid ColE1 replication
-
Giraldo-Suárez, R., M. E. Fernández-Tresguerres, R. Díaz-Orejas, A. Malki, and M. Kohiyama. 1993. The heat-shock DnaK protein is required for plasmid R1 replication and it is dispensable for plasmid ColE1 replication. Nucleic Acids Res. 21:5495-5499.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 5495-5499
-
-
Giraldo-Suárez, R.1
Fernández-Tresguerres, M.E.2
Díaz-Orejas, R.3
Malki, A.4
Kohiyama, M.5
-
111
-
-
0030794355
-
Determination of specific DNA strand discontinuities with nucleotide resolution in exponentionally growing bacteria harbouring rolling circle-replicating plasmids
-
Grohmann, E., E. L. Zechner, and M. Espinosa. 1997. Determination of specific DNA strand discontinuities with nucleotide resolution in exponentionally growing bacteria harbouring rolling circle-replicating plasmids. FEMS Microbiol. Lett. 152:363-369.
-
(1997)
FEMS Microbiol. Lett.
, vol.152
, pp. 363-369
-
-
Grohmann, E.1
Zechner, E.L.2
Espinosa, M.3
-
112
-
-
0023484843
-
Rolling circle replication of single-stranded DNA plasmid pC194
-
Gros, M.-F., H. te Riele, and S. D. Ehrlich. 1987. Rolling circle replication of single-stranded DNA plasmid pC194. EMBO J. 6:3863-3869.
-
(1987)
EMBO J.
, vol.6
, pp. 3863-3869
-
-
Gros, M.-F.1
Te Riele, H.2
Ehrlich, S.D.3
-
113
-
-
0024334198
-
The family of highly interrelated single-stranded deoxyribonucleic acid plasmids
-
Gruss, A. D., and S. D. Ehrlich. 1989. The family of highly interrelated single-stranded deoxyribonucleic acid plasmids. Microbiol. Rev. 53:231-241.
-
(1989)
Microbiol. Rev.
, vol.53
, pp. 231-241
-
-
Gruss, A.D.1
Ehrlich, S.D.2
-
114
-
-
0023220317
-
Functional analysis of a palindromic sequence required for normal replication of several staphylococcal plasmids
-
Gruss, A. D., H. Ross, and R. P. Novick. 1987. Functional analysis of a palindromic sequence required for normal replication of several staphylococcal plasmids. Proc. Natl. Acad. Sci. USA 84:2165-2169.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 2165-2169
-
-
Gruss, A.D.1
Ross, H.2
Novick, R.P.3
-
115
-
-
0022737025
-
Host participation in plasmid maintenance: Dependence upon dnaA of replicons derived from P1 and F
-
Hansen, E. B., and M. B. Yarmolinsky. 1986. Host participation in plasmid maintenance: dependence upon dnaA of replicons derived from P1 and F. Proc Natl. Acad. Sci. USA 83:4423-4427.
-
(1986)
Proc Natl. Acad. Sci. USA
, vol.83
, pp. 4423-4427
-
-
Hansen, E.B.1
Yarmolinsky, M.B.2
-
116
-
-
0002085277
-
Replication proteins of the IncQ plasmids
-
C. M. Thomas (ed.) Academic Press, Ltd., London, United Kingdom
-
Haring, V., and E. Scherzinger. 1989. Replication proteins of the IncQ plasmids, p. 95-124. In C. M. Thomas (ed.), Promiscuous plasmids of Gram-negative bacteria. Academic Press, Ltd., London, United Kingdom.
-
(1989)
Promiscuous Plasmids of Gram-negative Bacteria
, pp. 95-124
-
-
Haring, V.1
Scherzinger, E.2
-
117
-
-
0022347915
-
Protein RepC is involved in copy number control of the broad host range plasmid RSF1010
-
Haring, V., P. Scholz, E. Scherzinger, J. Frey, K. Derbyshire, G. Hatfull, N. S. Willetts, and M. Bagdasarian. 1985. Protein RepC is involved in copy number control of the broad host range plasmid RSF1010. Proc. Natl. Acad. Sci. USA 82:6090-6094.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 6090-6094
-
-
Haring, V.1
Scholz, P.2
Scherzinger, E.3
Frey, J.4
Derbyshire, K.5
Hatfull, G.6
Willetts, N.S.7
Bagdasarian, M.8
-
118
-
-
0017400812
-
Replication of plasmid pSC101 in Escherichia coli K12: Requirement for dnaA function
-
Hasunuma, K., and M. Sekiguchi. 1977. Replication of plasmid pSC101 in Escherichia coli K12: requirement for dnaA function. Mol. Gen. Genet. 154:225-230.
-
(1977)
Mol. Gen. Genet.
, vol.154
, pp. 225-230
-
-
Hasunuma, K.1
Sekiguchi, M.2
-
119
-
-
0026698149
-
The phenotypes of temperature-sensitive mini-RK2 replicons carrying mutations in the replication control gene trfA are suppressed nonspecifically by intragenic cop mutations
-
Haugan, K., P. Karunakan, J. M. Blatny, and S. Valla. 1992. The phenotypes of temperature-sensitive mini-RK2 replicons carrying mutations in the replication control gene trfA are suppressed nonspecifically by intragenic cop mutations. J. Bacteriol. 174:7026-7032.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7026-7032
-
-
Haugan, K.1
Karunakan, P.2
Blatny, J.M.3
Valla, S.4
-
120
-
-
0027400424
-
The complete nucleotide sequence of a small cryptic plasmid from a rumen bacterium of the genus Butyrivibrio
-
Hefford, M. A., R. M. Teather, and R. J. Forster. 1993. The complete nucleotide sequence of a small cryptic plasmid from a rumen bacterium of the genus Butyrivibrio. Plasmid 29:63-69.
-
(1993)
Plasmid
, vol.29
, pp. 63-69
-
-
Hefford, M.A.1
Teather, R.M.2
Forster, R.J.3
-
121
-
-
0026686379
-
Differential inhibition of the DNA translocation and DNA unwinding activities of DNA helicases by the Escherichia coli Tus protein
-
Hiasa, H., and K. J. Marians. 1992. Differential inhibition of the DNA translocation and DNA unwinding activities of DNA helicases by the Escherichia coli Tus protein. J. Biol. Chem. 267:11379-11385.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 11379-11385
-
-
Hiasa, H.1
Marians, K.J.2
-
122
-
-
0028364870
-
Topoisomerase IV can support oriC DNA replication in vitro
-
Hiasa, H., and K. J. Marians. 1994. Topoisomerase IV can support oriC DNA replication in vitro. J. Biol. Chem. 269:16371-16375.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 16371-16375
-
-
Hiasa, H.1
Marians, K.J.2
-
123
-
-
0028274627
-
Functional features of oriV of the broad host range plasmid RSF1010 in Pseudomonas aeruginosa
-
Higashi, A., H. Sakai, Y. Honda, T. Tanaka, D. M. Miao, T. Nakamura, Y. Taguchi, T. Komano, and M. Bagdasarian. 1994. Functional features of oriV of the broad host range plasmid RSF1010 in Pseudomonas aeruginosa. Plasmid 31:196-200.
-
(1994)
Plasmid
, vol.31
, pp. 196-200
-
-
Higashi, A.1
Sakai, H.2
Honda, Y.3
Tanaka, T.4
Miao, D.M.5
Nakamura, T.6
Taguchi, Y.7
Komano, T.8
Bagdasarian, M.9
-
124
-
-
0025356088
-
Mutational and physiological analyses of plasmid pT181 functions expressing incompatibility
-
Highlander, S. K., and R. P. Novick. 1990. Mutational and physiological analyses of plasmid pT181 functions expressing incompatibility. Plasmid 23:1-15.
-
(1990)
Plasmid
, vol.23
, pp. 1-15
-
-
Highlander, S.K.1
Novick, R.P.2
-
125
-
-
0026794488
-
Arrest of bacterial DNA replication
-
Hill, T. M. 1992. Arrest of bacterial DNA replication. Annu. Rev. Microbiol. 46:603-633.
-
(1992)
Annu. Rev. Microbiol.
, vol.46
, pp. 603-633
-
-
Hill, T.M.1
-
126
-
-
0024594367
-
tus, the trans-acting gene required for termination of DNA replication in Escherichia coli, encodes a DNA-binding protein
-
Hill, T. M., M. Tecklenburg, A. Pelletier, and P. L. Kuempel. 1989. tus, the trans-acting gene required for termination of DNA replication in Escherichia coli, encodes a DNA-binding protein. Proc. Natl. Acad. Sci. USA 86:1593-1597.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 1593-1597
-
-
Hill, T.M.1
Tecklenburg, M.2
Pelletier, A.3
Kuempel, P.L.4
-
127
-
-
0020480119
-
Discriminatory function of ribonuclease H in the selective initiation of plasmid DNA replication
-
Hillenbrand, G., and W. L. Staudenbauer. 1982. Discriminatory function of ribonuclease H in the selective initiation of plasmid DNA replication. Nucleic Acids Res. 10:834-853.
-
(1982)
Nucleic Acids Res.
, vol.10
, pp. 834-853
-
-
Hillenbrand, G.1
Staudenbauer, W.L.2
-
128
-
-
0027738415
-
Linear plasmids and chromosomes in bacteria
-
Hinnebusch, J., and K. Tilly. 1993. Linear plasmids and chromosomes in bacteria. Mol. Microbiol. 10:917-922.
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 917-922
-
-
Hinnebusch, J.1
Tilly, K.2
-
129
-
-
0028114780
-
Comparative analysis of the replicon regions of eleven ColE2-related plasmids
-
Hiraga, S. I., T. Sugiyama, and T. Itoh. 1994. Comparative analysis of the replicon regions of eleven ColE2-related plasmids. J. Bacteriol. 176:7233-7234.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 7233-7234
-
-
Hiraga, S.I.1
Sugiyama, T.2
Itoh, T.3
-
130
-
-
0028919939
-
Bulged-out nucleotides protect an antisense RNA from RNase III cleavage
-
Hjalt, T. A. H., and E. G. H. Wagner. 1995. Bulged-out nucleotides protect an antisense RNA from RNase III cleavage. Nucleic Acids Res. 23:571-579.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 571-579
-
-
Hjalt, T.A.H.1
Wagner, E.G.H.2
-
131
-
-
0028950890
-
Bulged-out nucleotides in an antisense RNA are required for rapid target RNA binding in vitro and inhibition in vivo
-
Hjalt, T. A. H., and E. G. H. Wagner. 1995. Bulged-out nucleotides in an antisense RNA are required for rapid target RNA binding in vitro and inhibition in vivo. Nucleic Acids Res. 23:580-587.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 580-587
-
-
Hjalt, T.A.H.1
Wagner, E.G.H.2
-
132
-
-
0028850851
-
Analysis of the halobacterial plasmid pHK2 minimal replicon
-
Holmes, M. L., F. Pfeifer, and M. L. Dyall-Smith. 1995. Analysis of the halobacterial plasmid pHK2 minimal replicon. Gene 153:117-121.
-
(1995)
Gene
, vol.153
, pp. 117-121
-
-
Holmes, M.L.1
Pfeifer, F.2
Dyall-Smith, M.L.3
-
133
-
-
0024357142
-
RepB′ is required in trans for the two single-strand DNA initiation signals in oriV of plasmid RSF1010
-
Honda, Y., H. Sakai, T. Komano, and M. Bagdasanan. 1989. RepB′ is required in trans for the two single-strand DNA initiation signals in oriV of plasmid RSF1010. Gene 80:155-159.
-
(1989)
Gene
, vol.80
, pp. 155-159
-
-
Honda, Y.1
Sakai, H.2
Komano, T.3
Bagdasanan, M.4
-
134
-
-
0026067822
-
Functional division and reconstruction of a plasmid replication origin: Molecular dissection of the oriV of the broad host-range plasmid RSF1010
-
Honda, Y., H. Sakai, H. Hiasa, K. Tanaka, T. Komano, and M. Bagdasarian. 1991. Functional division and reconstruction of a plasmid replication origin: molecular dissection of the oriV of the broad host-range plasmid RSF1010. Proc. Natl. Acad. Sci. USA 88:179-183.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 179-183
-
-
Honda, Y.1
Sakai, H.2
Hiasa, H.3
Tanaka, K.4
Komano, T.5
Bagdasarian, M.6
-
135
-
-
0024285014
-
Core sequence of two separable terminus sites is a 20 bp inverted repeat
-
Horiuchi, T., and M. Hidaka. 1988. Core sequence of two separable terminus sites is a 20 bp inverted repeat. Cell 54:515-523.
-
(1988)
Cell
, vol.54
, pp. 515-523
-
-
Horiuchi, T.1
Hidaka, M.2
-
136
-
-
0026748738
-
Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes, and archaebacteria
-
Ilyina, T. V., and E. V. Koonin. 1992. Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes, and archaebacteria. Nucleic Acids Res. 20:3279-3285.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 3279-3285
-
-
Ilyina, T.V.1
Koonin, E.V.2
-
137
-
-
0027170398
-
The pSC101 par locus alters protein-DNA interactions in vivo at the plasmid replication origin
-
Ingmer, H., and S. N. Cohen. 1993. The pSC101 par locus alters protein-DNA interactions in vivo at the plasmid replication origin. J. Bacteriol. 175:6046-6048.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 6046-6048
-
-
Ingmer, H.1
Cohen, S.N.2
-
138
-
-
0027134886
-
Excess intracellular concentration of pSC101 RepA protein interferes with both plasmid DNA replication and partitioning
-
Ingmer, H., and S. N. Cohen. 1993. Excess intracellular concentration of pSC101 RepA protein interferes with both plasmid DNA replication and partitioning. J. Bacteriol. 175:7834-7841.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 7834-7841
-
-
Ingmer, H.1
Cohen, S.N.2
-
139
-
-
0029160573
-
Monomer-dimer equilibrium of the pSC101 RepA protein
-
Ingmer, H., E. L. Fong, and S. N. Cohen. 1995. Monomer-dimer equilibrium of the pSC101 RepA protein. J. Mol. Biol. 250:309-314.
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 309-314
-
-
Ingmer, H.1
Fong, E.L.2
Cohen, S.N.3
-
140
-
-
0024679514
-
Specificity of the interactions between the Rep proteins and the origins of replication of Staphylococcus aureus plasmids pT181 and pC221
-
Iordanescu, S. 1989. Specificity of the interactions between the Rep proteins and the origins of replication of Staphylococcus aureus plasmids pT181 and pC221. Mol. Gen. Genet. 217:481-487.
-
(1989)
Mol. Gen. Genet.
, vol.217
, pp. 481-487
-
-
Iordanescu, S.1
-
141
-
-
0027507727
-
Characterization of the Staphylococcus aureus chromosomal gene pcrA, identified by mutations affecting plasmid pT181 replication
-
Iordanescu, S. 1993. Characterization of the Staphylococcus aureus chromosomal gene pcrA, identified by mutations affecting plasmid pT181 replication. Mol. Gen. Genet. 241:185-192.
-
(1993)
Mol. Gen. Genet.
, vol.241
, pp. 185-192
-
-
Iordanescu, S.1
-
142
-
-
0027154579
-
Plasmid pT181-linked suppressors of Staphylococcus aureus pcrA3 chromosomal mutation
-
Iordanescu, S. 1993. Plasmid pT181-linked suppressors of Staphylococcus aureus pcrA3 chromosomal mutation. J. Bacteriol. 175:3916-3917.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3916-3917
-
-
Iordanescu, S.1
-
143
-
-
0025935210
-
The Staphylococcus aureus mutation perA3 leads to the accumulation of pT181 replication initiation complexes
-
Iordanescu, S., and R. Basheer. 1991. The Staphylococcus aureus mutation perA3 leads to the accumulation of pT181 replication initiation complexes. J. Mol. Biol. 221:1183-1189.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 1183-1189
-
-
Iordanescu, S.1
Basheer, R.2
-
144
-
-
1842391776
-
Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H
-
Itoh, T., and J. Tomizawa. 1980. Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H. Proc. Natl. Acad. Sci. USA 77:2450-2454.
-
(1980)
Proc. Natl. Acad. Sci. USA
, vol.77
, pp. 2450-2454
-
-
Itoh, T.1
Tomizawa, J.2
-
145
-
-
0025266932
-
Structurally stable DNA cloning vectors
-
Jannière, L., C. Bruand, and S. D. Ehrlich. 1990. Structurally stable DNA cloning vectors. Gene 87:53-61.
-
(1990)
Gene
, vol.87
, pp. 53-61
-
-
Jannière, L.1
Bruand, C.2
Ehrlich, S.D.3
-
146
-
-
0029857239
-
The inactive pT181 initiator heterodimer RepC/C*, binds but fails to induce melting of the plasmid replication origin
-
Jin, R., X. Zhou, and R. P. Novick. 1996. The inactive pT181 initiator heterodimer RepC/C*, binds but fails to induce melting of the plasmid replication origin. J. Biol. Chem. 271:31086-31091.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 31086-31091
-
-
Jin, R.1
Zhou, X.2
Novick, R.P.3
-
147
-
-
0031036215
-
In vitro inhibitory activity of RepC/C*, the inactivated form of the pT181 plasmid initiation protein, RepC
-
Jin, R., A. Rasooly, and R. P. Novick. 1997. In vitro inhibitory activity of RepC/C*, the inactivated form of the pT181 plasmid initiation protein, RepC. J. Bacteriol. 179:141-147.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 141-147
-
-
Jin, R.1
Rasooly, A.2
Novick, R.P.3
-
148
-
-
0028294465
-
Host-inhibitory functions encoded by promiscuous plasmids. Transient arrest of Escherichia coli segregants that fail to inherit plasmid RK2
-
Jovanovic, O. S., E. K. Ayres, and D. H. Figurski. 1994. Host-inhibitory functions encoded by promiscuous plasmids. Transient arrest of Escherichia coli segregants that fail to inherit plasmid RK2. J. Mol. Biol. 237:52-44.
-
(1994)
J. Mol. Biol.
, vol.237
, pp. 52-144
-
-
Jovanovic, O.S.1
Ayres, E.K.2
Figurski, D.H.3
-
149
-
-
0029908981
-
Structure of a replication-terminator protein complexed with DNA
-
Kamada, K., T. Horiuchi, K. Ohsumi, N. Shimamoto, and K. Morikawa. 1996. Structure of a replication-terminator protein complexed with DNA. Nature 383:598-603.
-
(1996)
Nature
, vol.383
, pp. 598-603
-
-
Kamada, K.1
Horiuchi, T.2
Ohsumi, K.3
Shimamoto, N.4
Morikawa, K.5
-
150
-
-
0020593566
-
Nucleotide sequence of an incompatibility region of mini-Rts1 that contains five direct repeats
-
Kamio, Y., and Y. Terawaki. 1983. Nucleotide sequence of an incompatibility region of mini-Rts1 that contains five direct repeats. J. Bacteriol. 155:1185-1191.
-
(1983)
J. Bacteriol.
, vol.155
, pp. 1185-1191
-
-
Kamio, Y.1
Terawaki, Y.2
-
151
-
-
0024075832
-
Gene organization in a region containing a new gene involved in chromosome partitioning in Escherichia coli
-
Kato, J., Y. Nishimura, R. Imamura, H. Niki, S. Hiraga, and H. Suzuki. 1988. Gene organization in a region containing a new gene involved in chromosome partitioning in Escherichia coli. J. Bacteriol. 170:3967-3977.
-
(1988)
J. Bacteriol.
, vol.170
, pp. 3967-3977
-
-
Kato, J.1
Nishimura, Y.2
Imamura, R.3
Niki, H.4
Hiraga, S.5
Suzuki, H.6
-
152
-
-
0026042017
-
Conformational changes induced by integration host factor at origin gamma of R6K and copy control
-
Kelley, W. L., and D. Bastia. 1991. Conformational changes induced by integration host factor at origin gamma of R6K and copy control. J. Biol. Chem. 266:15924-15937.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 15924-15937
-
-
Kelley, W.L.1
Bastia, D.2
-
153
-
-
0026857560
-
Activation in vivo of the minimal replication origin beta of plasmid R6K requires a small target sequence essential for DNA looping
-
Kelley, W. L., and D. Bastia. 1992. Activation in vivo of the minimal replication origin beta of plasmid R6K requires a small target sequence essential for DNA looping. New Biol. 4:569-580.
-
(1992)
New Biol.
, vol.4
, pp. 569-580
-
-
Kelley, W.L.1
Bastia, D.2
-
154
-
-
0026647430
-
Structural and functional analysis of a replication enhancer: Separation of the enhancer activity from origin function by mutational dissection of the replication origin gamma of plasmid R6K
-
Kelley, W. L., I. Patel, and D. Bastia. 1992. Structural and functional analysis of a replication enhancer: separation of the enhancer activity from origin function by mutational dissection of the replication origin gamma of plasmid R6K. Proc. Natl. Acad. Sci. USA 89:5078-5082.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 5078-5082
-
-
Kelley, W.L.1
Patel, I.2
Bastia, D.3
-
155
-
-
0029026635
-
DNA polymerase III holoenzyme: Structure and function of a chromosomal replicating machine
-
Kelman, Z., and M. O'Donnell. 1995. DNA polymerase III holoenzyme: structure and function of a chromosomal replicating machine. Annu. Rev. Biochem. 64:171-200.
-
(1995)
Annu. Rev. Biochem.
, vol.64
, pp. 171-200
-
-
Kelman, Z.1
O'Donnell, M.2
-
156
-
-
0019851023
-
Replication of plasmid pT181 in vitro: Requirement for a plasmid-encoded product
-
Khan, S. A., S. M. Carleton, and R. P. Novick. 1981. Replication of plasmid pT181 in vitro: requirement for a plasmid-encoded product. Proc. Natl. Acad. Sci. USA 78:4902-4906.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 4902-4906
-
-
Khan, S.A.1
Carleton, S.M.2
Novick, R.P.3
-
157
-
-
0029692765
-
Mechanism of replication and copy number control of plasmids in Gram-positive bacteria
-
Khan, S. A. 1996. Mechanism of replication and copy number control of plasmids in Gram-positive bacteria. Genet. Eng. 18:183-201.
-
(1996)
Genet. Eng.
, vol.18
, pp. 183-201
-
-
Khan, S.A.1
-
158
-
-
0031440479
-
Rolling-circle replication of bacterial plasmids
-
Khan, S. A. 1997. Rolling-circle replication of bacterial plasmids. Microbiol. Mol. Biol. Rev. 61:442-455.
-
(1997)
Microbiol. Mol. Biol. Rev.
, vol.61
, pp. 442-455
-
-
Khan, S.A.1
-
159
-
-
0024453491
-
The replication terminator protein of Escherichia coli is a DNA sequence-specific contra-helicase
-
Khatri, G. S., T. MacAllister, P. R. Sista, and D. Bastia. 1989. The replication terminator protein of Escherichia coli is a DNA sequence-specific contra-helicase. Cell 59:667-674.
-
(1989)
Cell
, vol.59
, pp. 667-674
-
-
Khatri, G.S.1
MacAllister, T.2
Sista, P.R.3
Bastia, D.4
-
160
-
-
0027372831
-
Theta replication of the lactococcal plasmid pWVO2
-
Kiewiet, R., S. Bron, K. de Jonge, G. Venema, and J. F. M. L. Seegers. 1993. Theta replication of the lactococcal plasmid pWVO2. Mol. Microbiol. 10: 319-327.
-
(1993)
Mol. Microbiol.
, vol.10
, pp. 319-327
-
-
Kiewiet, R.1
Bron, S.2
De Jonge, K.3
Venema, G.4
Seegers, J.F.M.L.5
-
161
-
-
0022368972
-
Copy number of the broad host-range plasmid R1162 is determined by the amount of essential plasmid-encoded proteins
-
Kim, K., and R. J. Meyer. 1985. Copy number of the broad host-range plasmid R1162 is determined by the amount of essential plasmid-encoded proteins. J. Mol. Biol. 185:755-767.
-
(1985)
J. Mol. Biol.
, vol.185
, pp. 755-767
-
-
Kim, K.1
Meyer, R.J.2
-
162
-
-
0023056230
-
Copy number of broad host-range plasmid R1162 is regulated by a small RNA
-
Kim, K., and R. J. Meyer. 1986. Copy number of broad host-range plasmid R1162 is regulated by a small RNA. Nucleic Acids Res. 14:8027-8046.
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 8027-8046
-
-
Kim, K.1
Meyer, R.J.2
-
163
-
-
0002153524
-
Plasmid incompatibility and replication control
-
D. B. Clewell (ed.) Plenum Press, New York, N.Y.
-
Kittell, B. L., and D. R. Helinski. 1992. Plasmid incompatibility and replication control, p. 223-242. In D. B. Clewell (ed.), Bacterial conjugation. Plenum Press, New York, N.Y.
-
(1992)
Bacterial Conjugation
, pp. 223-242
-
-
Kittell, B.L.1
Helinski, D.R.2
-
164
-
-
0026056409
-
Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria
-
Kleanthous, H., C. L. Clayton, and S. Tabaqchali. 1991. Characterization of a plasmid from Helicobacter pylori encoding a replication protein common to plasmids in Gram-positive bacteria. Mol. Microbiol. 5:2377-2389.
-
(1991)
Mol. Microbiol.
, vol.5
, pp. 2377-2389
-
-
Kleanthous, H.1
Clayton, C.L.2
Tabaqchali, S.3
-
165
-
-
0345483323
-
Sequence-specific interaction between the replication initiator protein of plasmid pT181 and its origin of replication
-
Koepsel, R. R., R. W. Murray, and S. A. Khan. 1986. Sequence-specific interaction between the replication initiator protein of plasmid pT181 and its origin of replication. Proc. Natl. Acad. Sci. USA 83:5484-5488.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 5484-5488
-
-
Koepsel, R.R.1
Murray, R.W.2
Khan, S.A.3
-
166
-
-
0021804629
-
Purification of pT181-encoded RepC protein required for the imtiation of plasmid replication
-
Koepsel, R. R., R. W. Murray, W. D. Rosenblum, and S. A. Khan. 1985. Purification of pT181-encoded RepC protein required for the imtiation of plasmid replication. J. Biol. Chem. 260:8571-8577.
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 8571-8577
-
-
Koepsel, R.R.1
Murray, R.W.2
Rosenblum, W.D.3
Khan, S.A.4
-
167
-
-
0022473606
-
Static and initiator protein-enhanced bending of DNA at a replication origin
-
156c. Koepsel, R. R., and S. A. Khan. 1986. Static and initiator protein-enhanced bending of DNA at a replication origin. Science 233:1316-1318.
-
(1986)
Science
, vol.233
, pp. 1316-1318
-
-
Koepsel, R.R.1
Khan, S.A.2
-
168
-
-
0023665611
-
Cleavage of single-stranded DNA by plasmid pT181-encoded RepC protein
-
Koepsel, R. R., and S. A. Khan. 1987. Cleavage of single-stranded DNA by plasmid pT181-encoded RepC protein. Nucleic Acids Res. 15:4085-4097.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 4085-4097
-
-
Koepsel, R.R.1
Khan, S.A.2
-
169
-
-
2642639651
-
Absence of RNase H allows replication of pBR322 in Escherichia coli
-
Kogoma, T. 1984. Absence of RNase H allows replication of pBR322 in Escherichia coli. Proc. Natl. Acad. Sci. USA 81:7845-7849.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 7845-7849
-
-
Kogoma, T.1
-
170
-
-
0018190092
-
Isolation and characterization of the minimal fragment required for autonomous replication ("basic replicon") of a copy mutant (pKN102) of the antibiotic resistance factor R1
-
Kollek, R., W. Oertel, and W. Goebel. 1978. Isolation and characterization of the minimal fragment required for autonomous replication ("basic replicon") of a copy mutant (pKN102) of the antibiotic resistance factor R1. Mol. Gen. Genet. 162:51-57.
-
(1978)
Mol. Gen. Genet.
, vol.162
, pp. 51-57
-
-
Kollek, R.1
Oertel, W.2
Goebel, W.3
-
171
-
-
0018160926
-
The activity of replication terminus of plasmid R6K in hybrid replicons in Escherichia coli
-
Kolter, R., and D. Helinski. 1978. The activity of replication terminus of plasmid R6K in hybrid replicons in Escherichia coli. J. Mol. Biol. 124:425-441.
-
(1978)
J. Mol. Biol.
, vol.124
, pp. 425-441
-
-
Kolter, R.1
Helinski, D.2
-
172
-
-
0020390455
-
Attenuation in amino acid biosynthetic operons
-
Kolter, R., and C. Yanowsky. 1982. Attenuation in amino acid biosynthetic operons. Annu. Rev. Genet. 16:113-134.
-
(1982)
Annu. Rev. Genet.
, vol.16
, pp. 113-134
-
-
Kolter, R.1
Yanowsky, C.2
-
173
-
-
0030792096
-
Role of TrfA and DnaA proteins in origin opening during initiation of DNA replication of the broad host range plasmid RK2
-
Konieczny, I., K. S. Doran, D. R. Helinski, and A. Blasina. 1997. Role of TrfA and DnaA proteins in origin opening during initiation of DNA replication of the broad host range plasmid RK2. J. Biol. Chem. 272:20173-20178.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 20173-20178
-
-
Konieczny, I.1
Doran, K.S.2
Helinski, D.R.3
Blasina, A.4
-
175
-
-
0027205506
-
Computer-assisted dissection of rolling circle DNA replication
-
Koonin, E. V., and T. V. Ilyina. 1993. Computer-assisted dissection of rolling circle DNA replication. BioSystems 30:241-268.
-
(1993)
BioSystems
, vol.30
, pp. 241-268
-
-
Koonin, E.V.1
Ilyina, T.V.2
-
177
-
-
0023637264
-
Isolation and structure of the replicon of the promiscuous plasmid pCU1
-
Kozlowski, M., V. Thatte, P. C. K. Lau, L. P. Visentin, and V. N. Iyer. 1987. Isolation and structure of the replicon of the promiscuous plasmid pCU1. Gene 58:217-228.
-
(1987)
Gene
, vol.58
, pp. 217-228
-
-
Kozlowski, M.1
Thatte, V.2
Lau, P.C.K.3
Visentin, L.P.4
Iyer, V.N.5
-
178
-
-
0028961872
-
Lagging-strand origins of the promiscuous plasmid pMV158: Physical and functional characterization
-
Kramer, M. G., G. del Solar, and M. Espinosa. 1995. Lagging-strand origins of the promiscuous plasmid pMV158: physical and functional characterization. Microbiology 141:655-662.
-
(1995)
Microbiology
, vol.141
, pp. 655-662
-
-
Kramer, M.G.1
Del Solar, G.2
Espinosa, M.3
-
179
-
-
0030766851
-
Plasmid rolling circle replication: Identification of the RNA polymerase-directed primer RNA and requirement of DNA polymerase I for lagging strand initiation
-
Kramer, M. G., S. A. Khan, and M. Espinosa. 1997. Plasmid rolling circle replication: identification of the RNA polymerase-directed primer RNA and requirement of DNA polymerase I for lagging strand initiation. EMBO J. 16:5784-5795.
-
(1997)
EMBO J.
, vol.16
, pp. 5784-5795
-
-
Kramer, M.G.1
Khan, S.A.2
Espinosa, M.3
-
180
-
-
0031963077
-
Lagging-strand replication from the ssoA origin of plasmid pMV158 in Streptococcus pneumoniae: In vivo and in vitro influences of mutations in two conserved ssoA regions
-
Kramer, M. G., S. A. Khan, and M. Espinosa. 1998. Lagging-strand replication from the ssoA origin of plasmid pMV158 in Streptococcus pneumoniae: in vivo and in vitro influences of mutations in two conserved ssoA regions J. Bacteriol. 180:83-89.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 83-89
-
-
Kramer, M.G.1
Khan, S.A.2
Espinosa, M.3
-
181
-
-
0027402203
-
Roles of the G-site and φX174-type primosome assembly site in priming of leading-strand synthesis: Initiation by a mobile primosome and replication-fork arrest by RepA protein bound to oriR
-
Kubota, Y. H., K.-I. Arai, and H. Masai. 1993. Roles of the G-site and φX174-type primosome assembly site in priming of leading-strand synthesis: initiation by a mobile primosome and replication-fork arrest by RepA protein bound to oriR. Gene 126:9-16.
-
(1993)
Gene
, vol.126
, pp. 9-16
-
-
Kubota, Y.H.1
Arai, K.-I.2
Masai, H.3
-
182
-
-
0024355490
-
Replication of plasmids in gram-negative bacteria
-
Kües, U., and U. Stahl. 1989. Replication of plasmids in gram-negative bacteria. Microbiol. Rev. 53:491-516.
-
(1989)
Microbiol. Rev.
, vol.53
, pp. 491-516
-
-
Kües, U.1
Stahl, U.2
-
183
-
-
0021945830
-
Plasmid pT181 replication is regulated by two countertranscripts
-
Kumar, C., and R. P. Novick. 1985. Plasmid pT181 replication is regulated by two countertranscripts. Proc. Natl. Acad. Sci. USA 82:638-642.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 638-642
-
-
Kumar, C.1
Novick, R.P.2
-
184
-
-
0019883537
-
Base pairing of RNA I with its complementary sequence in the primer precursor inhibits ColE1 replication
-
Lacatena, R. M., and G. Cesareni. 1981. Base pairing of RNA I with its complementary sequence in the primer precursor inhibits ColE1 replication. Nature 294:623-626.
-
(1981)
Nature
, vol.294
, pp. 623-626
-
-
Lacatena, R.M.1
Cesareni, G.2
-
185
-
-
0022873158
-
Identification and analysis of genes for tetracycline resistance and replication functions in the broad-host-range plasmid pLS1
-
Lacks, S. A., P. López, B. Greenberg, and M. Espinosa. 1986. Identification and analysis of genes for tetracycline resistance and replication functions in the broad-host-range plasmid pLS1. J. Mol. Biol. 192:753-765.
-
(1986)
J. Mol. Biol.
, vol.192
, pp. 753-765
-
-
Lacks, S.A.1
López, P.2
Greenberg, B.3
Espinosa, M.4
-
186
-
-
0024295767
-
The leucine zipper: A hypothetical structure common to a new class of DNa binding proteins
-
Landschultz, W. H., P. F. Johnson, and S. L. Mcknight. 1988. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. Science 240:1759-1764.
-
(1988)
Science
, vol.240
, pp. 1759-1764
-
-
Landschultz, W.H.1
Johnson, P.F.2
Mcknight, S.L.3
-
187
-
-
0024326944
-
Escherichia coli replication termination protein impedes the action of helicases
-
Lee, E. H., A. Kornberg, M. Hidaka, T. Kobayashi, and T. Horiuchi. 1989. Escherichia coli replication termination protein impedes the action of helicases. Proc. Natl. Acad. Sci. USA 86:9104-9108.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 9104-9108
-
-
Lee, E.H.1
Kornberg, A.2
Hidaka, M.3
Kobayashi, T.4
Horiuchi, T.5
-
188
-
-
0025868077
-
Nucleotide sequence and characterization of the broad-host-range lactococcal plasmid pWVO1
-
Leenhouts, K. J., B. Tolner, S. Bron, J. Kok, G. Venema, and J. F. M. L. Seegers. 1991. Nucleotide sequence and characterization of the broad-host-range lactococcal plasmid pWVO1. Plasmid 26:55-66.
-
(1991)
Plasmid
, vol.26
, pp. 55-66
-
-
Leenhouts, K.J.1
Tolner, B.2
Bron, S.3
Kok, J.4
Venema, G.5
Seegers, J.F.M.L.6
-
189
-
-
0029951580
-
Initiator protein Pi can bind independently to two domains of the gamma origin core of plasmid R6K: The direct repeats and the A+T-rich segment
-
Levchenco, I., and M. Filutowicz. 1996. Initiator protein Pi can bind independently to two domains of the gamma origin core of plasmid R6K: the direct repeats and the A+T-rich segment. Nucleic Acids Res. 24:1936-1942.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 1936-1942
-
-
Levchenco, I.1
Filutowicz, M.2
-
190
-
-
0026708311
-
Analysis of mutations in of trfA, the replication initiation gene of the broad-host-range plasmid RK2
-
Lin, J., and D. R. Helinski. 1992. Analysis of mutations in of trfA, the replication initiation gene of the broad-host-range plasmid RK2. J. Bacteriol. 174:4110-4119.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 4110-4119
-
-
Lin, J.1
Helinski, D.R.2
-
191
-
-
0022576531
-
Directly repeated, 20 bp sequence of plasmid R1162 is required for replication, expression of incompatibility, and copy-number control
-
Lin, L. S., and R. J. Meyer. 1986. Directly repeated, 20 bp sequence of plasmid R1162 is required for replication, expression of incompatibility, and copy-number control. Plasmid 15:35-47.
-
(1986)
Plasmid
, vol.15
, pp. 35-47
-
-
Lin, L.S.1
Meyer, R.J.2
-
192
-
-
0016686246
-
Bidirectional replication of plasmid R6K DNA in Escherichia coli: Correspondence between origin of replication and position of single-stranded break in relaxed complex
-
Lovett, M. A., R. B. Sparks, and D. R. Helinski. 1975. Bidirectional replication of plasmid R6K DNA in Escherichia coli: correspondence between origin of replication and position of single-stranded break in relaxed complex. Proc. Natl. Acad. Sci. USA 72:2905-2909.
-
(1975)
Proc. Natl. Acad. Sci. USA
, vol.72
, pp. 2905-2909
-
-
Lovett, M.A.1
Sparks, R.B.2
Helinski, D.R.3
-
193
-
-
0023919061
-
Replication and incompatibility properties of plasmid pUB110 in Bacillus subtilis
-
Maciag, I. E., J.-F. Viret, and J. C. Alonso. 1988. Replication and incompatibility properties of plasmid pUB110 in Bacillus subtilis. Mol. Gen. Genet. 212:232-240.
-
(1988)
Mol. Gen. Genet.
, vol.212
, pp. 232-240
-
-
Maciag, I.E.1
Viret, J.-F.2
Alonso, J.C.3
-
194
-
-
0025151451
-
Gene F of plasmid RSF1010 codes for a low-molecular-weight repressor protein that autoregulates expression of the repAC operon
-
Maeser, S., P. Scholz, S. Otto, and E. Scherzinger. 1990. Gene F of plasmid RSF1010 codes for a low-molecular-weight repressor protein that autoregulates expression of the repAC operon. Nucleic Acids Res. 18:6215-6222.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 6215-6222
-
-
Maeser, S.1
Scholz, P.2
Otto, S.3
Scherzinger, E.4
-
195
-
-
2642613699
-
-
Personal communication
-
Maestro, B. Personal communication.
-
-
-
Maestro, B.1
-
196
-
-
0026657152
-
Monomers and dimers of the RepA protein in plasmid pSC101 replication: Domains in RepA
-
Manen, D., L. C. Upegui-Gonzalez, and L. Caro. 1992. Monomers and dimers of the RepA protein in plasmid pSC101 replication: domains in RepA. Proc. Natl. Acad. Sci. USA 89:8923-8927.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 8923-8927
-
-
Manen, D.1
Upegui-Gonzalez, L.C.2
Caro, L.3
-
197
-
-
0026777126
-
Prokaryotic DNA replication
-
Marians, K. J. 1992. Prokaryotic DNA replication. Annu. Rev. Biochem. 61:673-719.
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 673-719
-
-
Marians, K.J.1
-
198
-
-
0020857548
-
Definition of oriR, the minimum DNA segment essential for initiation of R1 plasmid replication in vivo
-
Masai, H., Y. Kaziro, and K.-I. Arai. 1983. Definition of oriR, the minimum DNA segment essential for initiation of R1 plasmid replication in vivo. Proc. Natl. Acad. Sci. USA 80:6814-6818.
-
(1983)
Proc. Natl. Acad. Sci. USA
, vol.80
, pp. 6814-6818
-
-
Masai, H.1
Kaziro, Y.2
Arai, K.-I.3
-
199
-
-
0023378032
-
RepA and DnaA proteins are required for initiation of R1 plasmid replication in vitro and interact with the oriR sequence
-
Masai, M., and K.-I. Arai. 1987. RepA and DnaA proteins are required for initiation of R1 plasmid replication in vitro and interact with the oriR sequence. Proc. Natl. Acad. Sci. USA 84:4781-4785.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 4781-4785
-
-
Masai, M.1
Arai, K.-I.2
-
200
-
-
2642615421
-
R1 plasmid replication in vitro: RepA- and DnaA-dependent initiation at oriR
-
R. E. Moses and W. C. Sammers (ed.) American Society for Microbiology, Washington, D.C.
-
Masai, M., and K. I. Arai. 1988. R1 plasmid replication in vitro: RepA-and DnaA-dependent initiation at oriR, p. 113-121. In R. E. Moses and W. C. Sammers (ed.), DNA replication and mutagenesis. American Society for Microbiology, Washington, D.C.
-
(1988)
DNA Replication and Mutagenesis
, pp. 113-121
-
-
Masai, M.1
Arai, K.I.2
-
201
-
-
0024369687
-
Leading strand synthesis of R1 plasmid replication in vitro is primed by primase alone at a specific site downstream of oriR
-
Masai, H., and K. I. Arai. 1989. Leading strand synthesis of R1 plasmid replication in vitro is primed by primase alone at a specific site downstream of oriR. J. Biol. Chem. 264:8082-8090.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 8082-8090
-
-
Masai, H.1
Arai, K.I.2
-
202
-
-
0025193390
-
Roles of φX174 type primase-dependent priming in initiation of lagging and leading strand synthesis of DNA replication
-
Masai, H., N. Nomura, Y. Kubota, and K. I. Arai. 1990. Roles of φX174 type primase-dependent priming in initiation of lagging and leading strand synthesis of DNA replication. J. Biol. Chem. 265:15124-15133.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 15124-15133
-
-
Masai, H.1
Nomura, N.2
Kubota, Y.3
Arai, K.I.4
-
203
-
-
0021278373
-
Effects of point mutations on formation and structure of the RNA primer for ColE1 DNA replication
-
Masukata, H., and J. Tomizawa. 1984. Effects of point mutations on formation and structure of the RNA primer for ColE1 DNA replication. Cell 36:513-522.
-
(1984)
Cell
, vol.36
, pp. 513-522
-
-
Masukata, H.1
Tomizawa, J.2
-
204
-
-
0025341582
-
A mechanism of formation of a persistent hybrid between elongating RNa and template DNA
-
Masukata, H., and J. Tomizawa. 1990. A mechanism of formation of a persistent hybrid between elongating RNA and template DNA. Cell 62: 331-338.
-
(1990)
Cell
, vol.62
, pp. 331-338
-
-
Masukata, H.1
Tomizawa, J.2
-
205
-
-
0013485817
-
Elements involved in the copy number regulation of the antibiotic resistance plasmid R6K
-
McEachern, M. J., M. Filutowicz, S. Yang, A. Greener, P. Mukhopadyay, and D. R. Helinski. 1986. Elements involved in the copy number regulation of the antibiotic resistance plasmid R6K. Banbury Rep. 24:195-204.
-
(1986)
Banbury Rep.
, vol.24
, pp. 195-204
-
-
McEachern, M.J.1
Filutowicz, M.2
Yang, S.3
Greener, A.4
Mukhopadyay, P.5
Helinski, D.R.6
-
206
-
-
0024386239
-
Negative control of plasmid R6K replication: Possible role of intermolecular coupling of replication origins
-
McEachern, M. J., M. A. Bott, P. A. Tooker, and D. R. Helinski. 1989. Negative control of plasmid R6K replication: possible role of intermolecular coupling of replication origins. Proc. Natl. Acad. Sci. USA 86:7942-7946.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 7942-7946
-
-
McEachern, M.J.1
Bott, M.A.2
Tooker, P.A.3
Helinski, D.R.4
-
207
-
-
0029162683
-
Characterization of the replication region of the Bacillus subtilis plasmid pLS20: A novel type of replicon
-
Meijer, W. J. J., A. J. de Boer, S. van Tongeren, G. Venema, and S. Bron. 1995. Characterization of the replication region of the Bacillus subtilis plasmid pLS20: a novel type of replicon. Nucleic Acids Res. 23:3214-3223.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 3214-3223
-
-
Meijer, W.J.J.1
De Boer, A.J.2
Van Tongeren, S.3
Venema, G.4
Bron, S.5
-
208
-
-
0028937062
-
Characterization of single strand origins of cryptic rolling-circle plasmids from Bacillus subtilis
-
Meijer, W. J. J., G. Venema, and S. Bron. 1995. Characterization of single strand origins of cryptic rolling-circle plasmids from Bacillus subtilis. Nucleic Acids Res. 23:612-619.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 612-619
-
-
Meijer, W.J.J.1
Venema, G.2
Bron, S.3
-
210
-
-
0027427531
-
A base-paired hairpin structure essential for the functional priming signal for DNA replication of the broad host-range plasmid RSF1010
-
Miao, D.-M., Y. Honda, K. Tanaka, A. Higashi, T. Nakamura, Y. Taguchi, H. Sakai, T. Komano, and M. Bagdasarian. 1993. A base-paired hairpin structure essential for the functional priming signal for DNA replication of the broad host-range plasmid RSF1010. Nucleic Acids Res. 21:4900-4903.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 4900-4903
-
-
Miao, D.-M.1
Honda, Y.2
Tanaka, K.3
Higashi, A.4
Nakamura, T.5
Taguchi, Y.6
Sakai, H.7
Komano, T.8
Bagdasarian, M.9
-
211
-
-
0023054129
-
Illegitimate recombination at the replication origin of the plasmid pC194
-
Michel, B., and S. D. Ehrlich. 1986. Illegitimate recombination at the replication origin of the plasmid pC194. EMBO J. 5:3691-3696.
-
(1986)
EMBO J.
, vol.5
, pp. 3691-3696
-
-
Michel, B.1
Ehrlich, S.D.2
-
212
-
-
0029116518
-
Boundaries of the pSC101 minimal replicon are conditional
-
Miller, C. A., H. Ingmer, and S. N. Cohen. 1995. Boundaries of the pSC101 minimal replicon are conditional. J. Bacteriol. 177:4865-4871.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4865-4871
-
-
Miller, C.A.1
Ingmer, H.2
Cohen, S.N.3
-
213
-
-
0023001366
-
Replication of pBR322 DNA in vitro with purified proteins. Requirement for topoisomerase I in the maintenance of template specificity
-
Minden, J. S., and K. J. Marians. 1985. Replication of pBR322 DNA in vitro with purified proteins. Requirement for topoisomerase I in the maintenance of template specificity. J. Biol. Chem. 261:11906-11917.
-
(1985)
J. Biol. Chem.
, vol.261
, pp. 11906-11917
-
-
Minden, J.S.1
Marians, K.J.2
-
214
-
-
0026533673
-
Activation of distant replication origins in vivo by DNA looping as revealed by a novel mutant form of an initiator protein defective in cooperativity at a distance
-
Miron, A., S. Mukherjee, and D. Bastia. 1992. Activation of distant replication origins in vivo by DNA looping as revealed by a novel mutant form of an initiator protein defective in cooperativity at a distance. EMBO J. 11:1205-1206.
-
(1992)
EMBO J.
, vol.11
, pp. 1205-1206
-
-
Miron, A.1
Mukherjee, S.2
Bastia, D.3
-
215
-
-
0028899629
-
Specific nicking-closing activity of the initiator of replication protein RepB of plasmid pMV158 on supercoiled or single-stranded DNA
-
Moscoso, M., G. del Solar, and M. Espinosa. 1995. Specific nicking-closing activity of the initiator of replication protein RepB of plasmid pMV158 on supercoiled or single-stranded DNA. J. Biol. Chem. 270:3772-3779.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 3772-3779
-
-
Moscoso, M.1
Del Solar, G.2
Espinosa, M.3
-
216
-
-
0028862199
-
In vitro recognition of the replication origin of pLS1 and of plasmids of the pLS1 family by the RepB initiator protein
-
Moscoso, M., G. del Solar, and M. Espinosa. 1995. In vitro recognition of the replication origin of pLS1 and of plasmids of the pLS1 family by the RepB initiator protein. J. Bacteriol. 177:7041-7049.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 7041-7049
-
-
Moscoso, M.1
Del Solar, G.2
Espinosa, M.3
-
217
-
-
0031584268
-
Initiation of replication of plasmid pMV158: Mechanisms of DNA strand transfer reactions mediated by the initiator RepB protein
-
Moscoso, M., R. Eritja, and M. Espinosa. 1997. Initiation of replication of plasmid pMV158: mechanisms of DNA strand transfer reactions mediated by the initiator RepB protein. J. Mol. Biol. 268:840-856.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 840-856
-
-
Moscoso, M.1
Eritja, R.2
Espinosa, M.3
-
218
-
-
0038747563
-
Detection of DNA looping due to simultaneous interaction of a DNA-binding protein with two spatially separated binding sites on DNA
-
Mukherjee, S., H. Erickson, and D. Bastia. 1988. Detection of DNA looping due to simultaneous interaction of a DNA-binding protein with two spatially separated binding sites on DNA. Proc. Natl. Acad. Sci. USA 85:6287-6291.
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 6287-6291
-
-
Mukherjee, S.1
Erickson, H.2
Bastia, D.3
-
219
-
-
0024284848
-
Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein
-
Mukherjee, S., H. Erickson, and D. Bastia. 1988. Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein. Cell 52:375-383.
-
(1988)
Cell
, vol.52
, pp. 375-383
-
-
Mukherjee, S.1
Erickson, H.2
Bastia, D.3
-
220
-
-
0022345862
-
Conformational changes in a replication origin induced by an initiator protein
-
Mukherjee, S., I. Patel, and D. Bastia. 1985. Conformational changes in a replication origin induced by an initiator protein. Cell 43:189-197.
-
(1985)
Cell
, vol.43
, pp. 189-197
-
-
Mukherjee, S.1
Patel, I.2
Bastia, D.3
-
221
-
-
0027485505
-
Open-complex formation by the host initiator, DnaA, at the origin of P1 plasmid replication
-
Mukhopadhyay, G., K. M. Carr, J. M. Kaguni, and D. K. Chattoraj. 1993. Open-complex formation by the host initiator, DnaA, at the origin of P1 plasmid replication. EMBO J. 12:4547-4554.
-
(1993)
EMBO J.
, vol.12
, pp. 4547-4554
-
-
Mukhopadhyay, G.1
Carr, K.M.2
Kaguni, J.M.3
Chattoraj, D.K.4
-
222
-
-
0029079081
-
The level of the pUB110 replication initiator protein is autoregulated, which provides an additional control for plasmid copy number
-
Müller, A. K., F. Rojo, and J. C. Alonso. 1995. The level of the pUB110 replication initiator protein is autoregulated, which provides an additional control for plasmid copy number. Nucleic Acids Res. 23:1894-1900.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 1894-1900
-
-
Müller, A.K.1
Rojo, F.2
Alonso, J.C.3
-
223
-
-
0022588798
-
Complete nucleotide sequences of Bacillus plasmids pUB110dB, pRBH1, and its copy mutants
-
Müller, R. E., T. Ano, T. Imanaka, and S. Aiba. 1986. Complete nucleotide sequences of Bacillus plasmids pUB110dB, pRBH1, and its copy mutants. Mol. Gen. Genet. 202:169-171.
-
(1986)
Mol. Gen. Genet.
, vol.202
, pp. 169-171
-
-
Müller, R.E.1
Ano, T.2
Imanaka, T.3
Aiba, S.4
-
224
-
-
0019825941
-
Nine unique repeating sequences in a region essential for replication and incompatibility of the mini-F plasmid
-
Murotsu, T., K. Matsubara, H. Sugisaki, and M. Takanami. 1981. Nine unique repeating sequences in a region essential for replication and incompatibility of the mini-F plasmid. Gene 15:257-271.
-
(1981)
Gene
, vol.15
, pp. 257-271
-
-
Murotsu, T.1
Matsubara, K.2
Sugisaki, H.3
Takanami, M.4
-
225
-
-
0024531907
-
Synthesis of single-stranded plasmid pT181 DNA in vitro
-
Murray, R. W., R. R. Koepsel, and S. A. Khan. 1989. Synthesis of single-stranded plasmid pT181 DNA in vitro. J. Biol. Chem. 264:1051-1057.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 1051-1057
-
-
Murray, R.W.1
Koepsel, R.R.2
Khan, S.A.3
-
226
-
-
0022542588
-
RNase H and replication of ColE1 DNA in Escherichia coli
-
Naito, S., and H. Uchida. 1986. RNase H and replication of ColE1 DNA in Escherichia coli. J. Bacteriol. 166:143-147.
-
(1986)
J. Bacteriol.
, vol.166
, pp. 143-147
-
-
Naito, S.1
Uchida, H.2
-
227
-
-
0026443001
-
Structure of the ColE1 DNA molecule before segregation to daughter molecules
-
Nakasu, S., and J. Tomizawa. 1992. Structure of the ColE1 DNA molecule before segregation to daughter molecules. Proc. Natl. Acad. Sci. USA 89:10139-10143.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10139-10143
-
-
Nakasu, S.1
Tomizawa, J.2
-
228
-
-
0023371898
-
DNA sequence analysis of host range mutants of the promiscuous incP-1 plasmid R18 and R86 with Tn7
-
Nash, J., and V. Krishnapillai. 1987. DNA sequence analysis of host range mutants of the promiscuous incP-1 plasmid R18 and R86 with Tn7. Plasmid 18:35-45.
-
(1987)
Plasmid
, vol.18
, pp. 35-45
-
-
Nash, J.1
Krishnapillai, V.2
-
229
-
-
0027497448
-
A 27 kd protein of Escherichia coli promotes antitermination of replication in vitro at a sequence-specific replication terminus
-
Natarajan, S., S. Kaul, A. Miron, and D. Bastia. 1993. A 27 kd protein of Escherichia coli promotes antitermination of replication in vitro at a sequence-specific replication terminus. Cell 72:113-120.
-
(1993)
Cell
, vol.72
, pp. 113-120
-
-
Natarajan, S.1
Kaul, S.2
Miron, A.3
Bastia, D.4
-
230
-
-
0026556881
-
Genetic and functional analysis of the basic replicon of pPS10, a plasmid specific for Pseudomonas isolated from Pseudomonas syringae pathovar savastanoi
-
Nieto, C., R. Giraldo, E. Fernández-Tresguerres, and R. Díaz. 1992. Genetic and functional analysis of the basic replicon of pPS10, a plasmid specific for Pseudomonas isolated from Pseudomonas syringae pathovar savastanoi. J. Mol. Biol. 223:415-426.
-
(1992)
J. Mol. Biol.
, vol.223
, pp. 415-426
-
-
Nieto, C.1
Giraldo, R.2
Fernández-Tresguerres, E.3
Díaz, R.4
-
231
-
-
0025175921
-
Initiation of rolling-circle replication in pT181 plasmid: Initiator protein enhances cruciform extrusion at the origin
-
Noirot, P., J. Bargonetti, and R. P. Novick. 1990. Initiation of rolling-circle replication in pT181 plasmid: initiator protein enhances cruciform extrusion at the origin. Proc. Natl. Acad. Sci. USA 87:8560-8564.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 8560-8564
-
-
Noirot, P.1
Bargonetti, J.2
Novick, R.P.3
-
232
-
-
0028024632
-
Active site of the replication protein of the rolling circle plasmid pC194
-
Noirot-Gros, M. F., V. Bidnenko, and S. D. Ehrlich. 1994. Active site of the replication protein of the rolling circle plasmid pC194. EMBO J. 13:4412-4420.
-
(1994)
EMBO J.
, vol.13
, pp. 4412-4420
-
-
Noirot-Gros, M.F.1
Bidnenko, V.2
Ehrlich, S.D.3
-
233
-
-
0029908732
-
Change of a catalytic reaction carried out by a DNA replication protein
-
Noirot-Gros, M. F., and S. D. Ehrlich. 1996. Change of a catalytic reaction carried out by a DNA replication protein. Science 274:777-780.
-
(1996)
Science
, vol.274
, pp. 777-780
-
-
Noirot-Gros, M.F.1
Ehrlich, S.D.2
-
234
-
-
0025790154
-
Identification of eleven single-strand initiation sequences (ssi) for priming of DNA replication in the F, R6K, R100, and ColE2 plasmids
-
Nomura, N., H. Masai, M. Inuzuka, C. Miyazaki, E. Ohtsubo, T. Itoh, S. Sasamoto, M. Matsui, R. Ishizaki, and K. I. Arai. 1991. Identification of eleven single-strand initiation sequences (ssi) for priming of DNA replication in the F, R6K, R100, and ColE2 plasmids. Gene 108:15-22.
-
(1991)
Gene
, vol.108
, pp. 15-22
-
-
Nomura, N.1
Masai, H.2
Inuzuka, M.3
Miyazaki, C.4
Ohtsubo, E.5
Itoh, T.6
Sasamoto, S.7
Matsui, M.8
Ishizaki, R.9
Arai, K.I.10
-
235
-
-
0019132435
-
Expression of DNA strand initiation sequence of ColE1 plasmid in a single-stranded DNA phage
-
Nomura, N., and D. S. Ray. 1980. Expression of DNA strand initiation sequence of ColE1 plasmid in a single-stranded DNA phage. Proc. Natl. Acad. Sci. USA 77:6566-6570.
-
(1980)
Proc. Natl. Acad. Sci. USA
, vol.77
, pp. 6566-6570
-
-
Nomura, N.1
Ray, D.S.2
-
236
-
-
0020628288
-
Control of plasmid replication
-
Nordström, K. 1983. Control of plasmid replication. Plasmid 9:1-7.
-
(1983)
Plasmid
, vol.9
, pp. 1-7
-
-
Nordström, K.1
-
237
-
-
0021984898
-
Control of plasmid replication: Theoretical considerations and practical solutions
-
D. R. Helinski, S. N. Cohen, D. B. Clewell, D. A. Jackson, and A. Hollaender (ed.) Plenum Press, New York, N.Y.
-
Nordström, K. 1985. Control of plasmid replication: theoretical considerations and practical solutions, p. 189-214. In D. R. Helinski, S. N. Cohen, D. B. Clewell, D. A. Jackson, and A. Hollaender (ed.), Plasmids in bacteria. Plenum Press, New York, N.Y.
-
(1985)
Plasmids in Bacteria
, pp. 189-214
-
-
Nordström, K.1
-
238
-
-
0025606230
-
Control of plasmid replication. How do DNA iterons set the replication frequency?
-
Nordström, K. 1990. Control of plasmid replication. How do DNA iterons set the replication frequency? Cell 63:1121-1124.
-
(1990)
Cell
, vol.63
, pp. 1121-1124
-
-
Nordström, K.1
-
239
-
-
0021150228
-
Control of replication of bacterial plasmids: Genetics, molecular biology, and physiology of the plasmid R1 system
-
Nordström, K., S. Molin, and J. Light. 1984. Control of replication of bacterial plasmids: genetics, molecular biology, and physiology of the plasmid R1 system. Plasmid 12:71-90.
-
(1984)
Plasmid
, vol.12
, pp. 71-90
-
-
Nordström, K.1
Molin, S.2
Light, J.3
-
240
-
-
0015334701
-
Mutations in R factors of Escherichia coli causing an increased number of R-factor copies per chromosome
-
Nordström, K., L. C. Ingram, and A. Lundbäck. 1972. Mutations in R factors of Escherichia coli causing an increased number of R-factor copies per chromosome. J. Bacteriol. 110:562-569.
-
(1972)
J. Bacteriol.
, vol.110
, pp. 562-569
-
-
Nordström, K.1
Ingram, L.C.2
Lundbäck, A.3
-
241
-
-
0028359588
-
Kinetic aspect of control of plasmid replication by antisense RNA
-
Nordström, K., and E. G. H. Wagner. 1994. Kinetic aspect of control of plasmid replication by antisense RNA. Trends Biochem. Sci. 19:294-300.
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 294-300
-
-
Nordström, K.1
Wagner, E.G.H.2
-
242
-
-
0023575486
-
Plasmid incompatibility
-
Novick, R. P. 1987. Plasmid incompatibility. Microbiol. Rev. 51:381-395.
-
(1987)
Microbiol. Rev.
, vol.51
, pp. 381-395
-
-
Novick, R.P.1
-
243
-
-
0024458028
-
Staphylococcal plasmids and their replication
-
Novick, R. P. 1989. Staphylococcal plasmids and their replication. Annu. Rev. Microbiol. 43:537-565.
-
(1989)
Annu. Rev. Microbiol.
, vol.43
, pp. 537-565
-
-
Novick, R.P.1
-
244
-
-
0021513585
-
Control of pT181 replication. I. The pT181 copy control function acts by inhibiting the synthesis of a replication protein
-
Novick, R. P., G. K. Adler, S. J. Projan, S. M. Carleton, S. K. Highlander, S. A. Gruss, S. A. Khan, and S. Iordanescu. 1984. Control of pT181 replication. I. The pT181 copy control function acts by inhibiting the synthesis of a replication protein. EMBO J. 3:2399-2405.
-
(1984)
EMBO J.
, vol.3
, pp. 2399-2405
-
-
Novick, R.P.1
Adler, G.K.2
Projan, S.J.3
Carleton, S.M.4
Highlander, S.K.5
Gruss, S.A.6
Khan, S.A.7
Iordanescu, S.8
-
245
-
-
0024473736
-
pT181 plasmid replication is regulated by a countertranscript-driven transcriptional attenuator
-
Novick, R. P., S. Iordanescu, S. J. Projan, J. Kornblum, and I. Edelman. 1989. pT181 plasmid replication is regulated by a countertranscript-driven transcriptional attenuator. Cell 59:395-404.
-
(1989)
Cell
, vol.59
, pp. 395-404
-
-
Novick, R.P.1
Iordanescu, S.2
Projan, S.J.3
Kornblum, J.4
Edelman, I.5
-
246
-
-
0030844429
-
Genes involved in conjugative DNA processing of plasmid R6K
-
Núñez, B., P. Avila, and F. de la Cruz. 1997. Genes involved in conjugative DNA processing of plasmid R6K. Mol. Microbiol. 24:1157-1168.
-
(1997)
Mol. Microbiol.
, vol.24
, pp. 1157-1168
-
-
Núñez, B.1
Avila, P.2
De La Cruz, F.3
-
247
-
-
0023056750
-
The involvement of host replication proteins and of specific origin sequences in the in vitro replication of miniplasmid R1 DNA
-
Ortega, S., E. Lanka, and R. Díaz. 1986. The involvement of host replication proteins and of specific origin sequences in the in vitro replication of miniplasmid R1 DNA. Nucleic Acids Res. 14:4865-4879.
-
(1986)
Nucleic Acids Res.
, vol.14
, pp. 4865-4879
-
-
Ortega, S.1
Lanka, E.2
Díaz, R.3
-
248
-
-
0024657850
-
Isolation and characterization of a conditional replication mutant of the antibiotic resistance factor R1 affected in the gene of the replication protein repA
-
Ortega, S., G. de Torrontegui, and R. Díaz. 1989. Isolation and characterization of a conditional replication mutant of the antibiotic resistance factor R1 affected in the gene of the replication protein repA. Mol. Gen. Genet. 217:111-117.
-
(1989)
Mol. Gen. Genet.
, vol.217
, pp. 111-117
-
-
Ortega, S.1
De Torrontegui, G.2
Díaz, R.3
-
249
-
-
0026513239
-
DnaA dependent replication of plasmid R1 occurs in the presence of point mutations that disrupt the dnaA box of oriR
-
Ortega-Jiménez, S., R. Giraldo-Suárez, M. E. Fernández-Tresguerres, A. Berzal-Herranz, and R. Díaz-Orejas. 1992. DnaA dependent replication of plasmid R1 occurs in the presence of point mutations that disrupt the dnaA box of oriR. Nucleic Acids Res. 20:2547-2551.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 2547-2551
-
-
Ortega-Jiménez, S.1
Giraldo-Suárez, R.2
Fernández-Tresguerres, M.E.3
Berzal-Herranz, A.4
Díaz-Orejas, R.5
-
250
-
-
0028670283
-
Purification of pKYM-encoded RepK, a protein required for the initiation of plasmid replication
-
Ozaki, E., H. Yashubara, and Y. Masamune. 1994. Purification of pKYM-encoded RepK, a protein required for the initiation of plasmid replication. J. Gen. Appl. Microbiol. 40:365-375.
-
(1994)
J. Gen. Appl. Microbiol.
, vol.40
, pp. 365-375
-
-
Ozaki, E.1
Yashubara, H.2
Masamune, Y.3
-
252
-
-
0030918709
-
Mechanism of protein remodeling by ClpA chaperone
-
Pak, M., and S. Wickner. 1997. Mechanism of protein remodeling by ClpA chaperone. Proc. Natl. Acad. Sci. USA 94:4901-4906.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 4901-4906
-
-
Pak, M.1
Wickner, S.2
-
253
-
-
0023054011
-
Role of initiator titration in copy number control
-
Pal, S., R. J. Mason, and D. K. Chattoraj. 1986. Role of initiator titration in copy number control. J. Mol. Biol. 192:275-285.
-
(1986)
J. Mol. Biol.
, vol.192
, pp. 275-285
-
-
Pal, S.1
Mason, R.J.2
Chattoraj, D.K.3
-
254
-
-
0023746642
-
P1 plasmid replication: Initiator sequestration is inadequate to explain control by initiator-binding sites
-
Pal, S. K., and D. K. Chattoraj. 1988. P1 plasmid replication: initiator sequestration is inadequate to explain control by initiator-binding sites. J. Bacteriol. 170:3554-3560.
-
(1988)
J. Bacteriol.
, vol.170
, pp. 3554-3560
-
-
Pal, S.K.1
Chattoraj, D.K.2
-
255
-
-
0025771149
-
Common sequence motifs in DNA relaxases and nick regions from a variety of DNA transfer systems
-
Pansegrau, W., and E. Lanka. 1991. Common sequence motifs in DNA relaxases and nick regions from a variety of DNA transfer systems. Nucleic Acids Res. 19:3455.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 3455
-
-
Pansegrau, W.1
Lanka, E.2
-
256
-
-
0029889208
-
Mechanisms of initiation and termination reactions in conjugative DNA processing. Independence of tight substrate binding and catalytic activity of relaxase (TraI) of IncPa plasmid RP4
-
Pansegrau, W., and E. Lanka. 1996. Mechanisms of initiation and termination reactions in conjugative DNA processing. Independence of tight substrate binding and catalytic activity of relaxase (TraI) of IncPa plasmid RP4. J. Biol. Chem. 271:13068-13076.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 13068-13076
-
-
Pansegrau, W.1
Lanka, E.2
-
257
-
-
0028302354
-
Complete nucleotide sequence of Birmingham IncP alpha plasmids. Compilation and comparative analysis
-
Pansegrau, W., E. Lanka, P. T. Barth, D. H. Figurski, D. G. Guiney, D. Haas, D. R. Helinski, H. Schwab, V. A. Stanisich, and C. M. Thomas. 1995. Complete nucleotide sequence of Birmingham IncP alpha plasmids. Compilation and comparative analysis. J. Mol. Biol. 239:623-663.
-
(1995)
J. Mol. Biol.
, vol.239
, pp. 623-663
-
-
Pansegrau, W.1
Lanka, E.2
Barth, P.T.3
Figurski, D.H.4
Guiney, D.G.5
Haas, D.6
Helinski, D.R.7
Schwab, H.8
Stanisich, V.A.9
Thomas, C.M.10
-
258
-
-
0027519338
-
Information analysis of sequences that bind the replication initiator RepA
-
Papp, P. P., D. K. Chattoraj, and T. D. Schneider. 1993. Information analysis of sequences that bind the replication initiator RepA. J. Mol. Biol. 233:219-230.
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 219-230
-
-
Papp, P.P.1
Chattoraj, D.K.2
Schneider, T.D.3
-
259
-
-
0022878781
-
A replication origin is turned off by an origin "silencer" sequence
-
Patel, I., and D. Bastia. 1986. A replication origin is turned off by an origin "silencer" sequence. Cell 47:785-792.
-
(1986)
Cell
, vol.47
, pp. 785-792
-
-
Patel, I.1
Bastia, D.2
-
260
-
-
0023646761
-
A replication initiator protein enhances the rate of hybrid formation between a silencer RNA and an activator RNA
-
Patel, I., and D. Bastia. 1987. A replication initiator protein enhances the rate of hybrid formation between a silencer RNA and an activator RNA. Cell 51:455-462.
-
(1987)
Cell
, vol.51
, pp. 455-462
-
-
Patel, I.1
Bastia, D.2
-
261
-
-
0027171678
-
Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro
-
Peng, H., and K. J. Marians. 1993. Decatenation activity of topoisomerase IV during oriC and pBR322 DNA replication in vitro. Proc. Natl. Acad. Sci. USA 90:8571-8575.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 8571-8575
-
-
Peng, H.1
Marians, K.J.2
-
262
-
-
0028806614
-
The interaction of Escherichia coli topoisomerase IV with DNA
-
Peng, H., and K. J. Marians. 1995. The interaction of Escherichia coli topoisomerase IV with DNA. J. Biol. Chem. 270:25286-25290.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 25286-25290
-
-
Peng, H.1
Marians, K.J.2
-
263
-
-
0024563783
-
Nucleotide sequence analysis and expression of the minimum RepI replication region and incompatibility determinants of pCo91V-K30
-
Pérez-Casal, J., A. E. Gammie, and J. H. Crosa. 1989. Nucleotide sequence analysis and expression of the minimum RepI replication region and incompatibility determinants of pCo91V-K30. J. Bacteriol. 171:2195-2201.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 2195-2201
-
-
Pérez-Casal, J.1
Gammie, A.E.2
Crosa, J.H.3
-
264
-
-
0024272030
-
ColE1 replication control circuitry: Sense from antisense
-
Polisky, B. 1988. ColE1 replication control circuitry: sense from antisense. Cell 55:929-932.
-
(1988)
Cell
, vol.55
, pp. 929-932
-
-
Polisky, B.1
-
265
-
-
0028294356
-
Control of replication of the Lactobacillus pentosus plasmid p353-2: Coding for the replication protein
-
Pouwels, P. H., N. van Luijk, R. J. Leer, and M. Posno. 1994. Control of replication of the Lactobacillus pentosus plasmid p353-2: coding for the replication protein. Mol. Gen. Genet. 242:614-622.
-
(1994)
Mol. Gen. Genet.
, vol.242
, pp. 614-622
-
-
Pouwels, P.H.1
Van Luijk, N.2
Leer, R.J.3
Posno, M.4
-
266
-
-
0024410201
-
Region of the streptococcal plasmid pMV158 required for conjugative mobilization
-
Priebe, S. D., and S. A. Lacks. 1989. Region of the streptococcal plasmid pMV158 required for conjugative mobilization. J. Bacteriol. 171:4778-4784.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 4778-4784
-
-
Priebe, S.D.1
Lacks, S.A.2
-
267
-
-
0344806554
-
Control of DNA replication in bacteria
-
I. Molineux and M. Kohiyama (ed.) Plenum Press, New York, N.Y.
-
Pritchard, R. H. 1978. Control of DNA replication in bacteria, p. 1-22. In I. Molineux and M. Kohiyama (ed.), DNA synthesis: present and future. Plenum Press, New York, N.Y.
-
(1978)
DNA Synthesis: Present and Future
, pp. 1-22
-
-
Pritchard, R.H.1
-
269
-
-
0023748934
-
Comparative analysis of five related staphylococcal plasmids
-
Projan, S. J., and R. P. Novick. 1988. Comparative analysis of five related staphylococcal plasmids. Plasmid 19:203-221.
-
(1988)
Plasmid
, vol.19
, pp. 203-221
-
-
Projan, S.J.1
Novick, R.P.2
-
270
-
-
0024283902
-
Identification of the origin and direction of replication of the broad-host-range plasmid pLS1
-
Puyet, A., G. del Solar, and M. Espinosa. 1988. Identification of the origin and direction of replication of the broad-host-range plasmid pLS1. Nucleic Acids Res. 16:115-133.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 115-133
-
-
Puyet, A.1
Del Solar, G.2
Espinosa, M.3
-
271
-
-
0027717127
-
Replication-specific inactivation of the pT181 plasmid initiator protein
-
Rasooly, A., and R. P. Novick. 1993. Replication-specific inactivation of the pT181 plasmid initiator protein. Science 262:1048-1050.
-
(1993)
Science
, vol.262
, pp. 1048-1050
-
-
Rasooly, A.1
Novick, R.P.2
-
272
-
-
0028221881
-
Plasmids of the pT181 family show replication-specific initiator protein modification
-
Rasooly, A., S. J. Projan, and R. P. Novick. 1994. Plasmids of the pT181 family show replication-specific initiator protein modification. J. Bacteriol. 176:2450-2453.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 2450-2453
-
-
Rasooly, A.1
Projan, S.J.2
Novick, R.P.3
-
273
-
-
0027946914
-
Replication-specific conversion of the Staphylococcus aureus pT181 initiator protein from an active homodimer to an inactive heterodimer
-
Rasooly, A., P.-Z. Wang, and R. P. Novick. 1994. Replication-specific conversion of the Staphylococcus aureus pT181 initiator protein from an active homodimer to an inactive heterodimer. EMBO J. 13:5245-5251.
-
(1994)
EMBO J.
, vol.13
, pp. 5245-5251
-
-
Rasooly, A.1
Wang, P.-Z.2
Novick, R.P.3
-
274
-
-
0030561293
-
Modification of the plasmid initiator protein RepC active site during replication
-
Rasooly, A., and R. S. Rasooly. 1996. Modification of the plasmid initiator protein RepC active site during replication. FEMS Microbiol. Lett. 145: 245-253.
-
(1996)
FEMS Microbiol. Lett.
, vol.145
, pp. 245-253
-
-
Rasooly, A.1
Rasooly, R.S.2
-
275
-
-
0029953156
-
The replication initiator protein Pi of plasmid R6K specifically interacts with the host-encoded helicase DnaB
-
Ratnakar, P. V., B. K. Mohanty, M. Lobert, and D. Bastia. 1996. The replication initiator protein Pi of plasmid R6K specifically interacts with the host-encoded helicase DnaB. Proc. Natl. Acad. Sci. USA 86:3026-3030.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 3026-3030
-
-
Ratnakar, P.V.1
Mohanty, B.K.2
Lobert, M.3
Bastia, D.4
-
276
-
-
0027481234
-
Control of mini-R1 plasmid replication: A computer simulation
-
Rosenfeld, R., and N. B. Grover. 1993. Control of mini-R1 plasmid replication: a computer simulation. Plasmid 29:94-116.
-
(1993)
Plasmid
, vol.29
, pp. 94-116
-
-
Rosenfeld, R.1
Grover, N.B.2
-
277
-
-
0027291015
-
Prediction of protein structure at better than 70% accuracy
-
Rost, B., and C. Sander. 1993. Prediction of protein structure at better than 70% accuracy. J. Mol. Biol. 232:584-599.
-
(1993)
J. Mol. Biol.
, vol.232
, pp. 584-599
-
-
Rost, B.1
Sander, C.2
-
278
-
-
0028783905
-
The contrahelicase activities of the replication terminator proteins of Escherichia coli and Bacillus subtilis are helicase-specific and impede both helicase translocation and authentic DNA unwinding
-
Sahoo, T., B. K. Mohanty, A. Manna, M. Lobert, and D. Bastia. 1995. The contrahelicase activities of the replication terminator proteins of Escherichia coli and Bacillus subtilis are helicase-specific and impede both helicase translocation and authentic DNA unwinding. J. Biol. Chem. 270: 29138-29144.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 29138-29144
-
-
Sahoo, T.1
Mohanty, B.K.2
Manna, A.3
Lobert, M.4
Bastia, D.5
-
279
-
-
0028817314
-
Termination of DNA replication in vitro. Requirement for stereospecific interactions between two dimers of the replication termination protein of Bacillus subtilis and with the terminator site to elicit polar contrahelicase and fork impedence
-
Sahoo, T., B. K. Mohanty, I. Patel, and D. Bastia. 1995. Termination of DNA replication in vitro. Requirement for stereospecific interactions between two dimers of the replication termination protein of Bacillus subtilis and with the terminator site to elicit polar contrahelicase and fork impedence. EMBO J. 14:619-628.
-
(1995)
EMBO J.
, vol.14
, pp. 619-628
-
-
Sahoo, T.1
Mohanty, B.K.2
Patel, I.3
Bastia, D.4
-
280
-
-
0030094024
-
DNA replication of the IncQ broad-host-range plasmids in gram-negative bacteria
-
Sakai, H., and T. Komano. 1996. DNA replication of the IncQ broad-host-range plasmids in gram-negative bacteria. Biosci. Biotechnol. Biochem. 60:377-382.
-
(1996)
Biosci. Biotechnol. Biochem.
, vol.60
, pp. 377-382
-
-
Sakai, H.1
Komano, T.2
-
281
-
-
0025815855
-
Protein-priming of DNA replication
-
Salas, M. 1991. Protein-priming of DNA replication. Annu. Rev. Biochem. 60:39-71.
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 39-71
-
-
Salas, M.1
-
282
-
-
3042902735
-
Replication of the broad host-range plasmid RSF1010: Requirement for three plasmid encoded proteins
-
Scherzinger, E., M. M. Bagdasarian, P. Scholz, R. Lurz, B. Rückert and M. Bagdasarian. 1984. Replication of the broad host-range plasmid RSF1010: requirement for three plasmid encoded proteins. Proc. Natl. Acad. Sci. USA 81:654-658.
-
(1984)
Proc. Natl. Acad. Sci. USA
, vol.81
, pp. 654-658
-
-
Scherzinger, E.1
Bagdasarian, M.M.2
Scholz, P.3
Lurz, R.4
Rückert, B.5
Bagdasarian, M.6
-
283
-
-
0026080434
-
Plasmid RSF1010 DNA replication in vitro promoted by purified RSF1010 RepA, RepB and RepC proteins
-
Scherzinger, E., V. Haring, R. Lurz, and S. Otto. 1991. Plasmid RSF1010 DNA replication in vitro promoted by purified RSF1010 RepA, RepB and RepC proteins. Nucleic Acids Res. 19:1203-1211.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 1203-1211
-
-
Scherzinger, E.1
Haring, V.2
Lurz, R.3
Otto, S.4
-
284
-
-
0024544412
-
Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010
-
Scholz, P., V. Haring, B. Wittmann-Liebold, K. Ashman, M. Bagdasanan, and E. Scherzinger. 1989. Complete nucleotide sequence and gene organization of the broad-host-range plasmid RSF1010. Gene 75:271-288.
-
(1989)
Gene
, vol.75
, pp. 271-288
-
-
Scholz, P.1
Haring, V.2
Wittmann-Liebold, B.3
Ashman, K.4
Bagdasanan, M.5
Scherzinger, E.6
-
285
-
-
0028823264
-
Structural and functional analysis of the single-strand origin of replication from the lactococcal plasmid pWV01
-
Seegers, J. F. M. L., A. C. Zhao, W. J. J. Meijer, S. A. Khan, G. Venema, and S. Bron. 1995. Structural and functional analysis of the single-strand origin of replication from the lactococcal plasmid pWV01. Mol. Gen. Genet. 249:43-50.
-
(1995)
Mol. Gen. Genet.
, vol.249
, pp. 43-50
-
-
Seegers, J.F.M.L.1
Zhao, A.C.2
Meijer, W.J.J.3
Khan, S.A.4
Venema, G.5
Bron, S.6
-
286
-
-
0023845155
-
Functionality of DnaA protein binding site in DNA replication is orientation-dependent
-
Seufert, W., B. Dobrinski, R. Lurz, and W. Messer. 1988. Functionality of DnaA protein binding site in DNA replication is orientation-dependent. J. Biol. Chem. 263:2719-2723.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 2719-2723
-
-
Seufert, W.1
Dobrinski, B.2
Lurz, R.3
Messer, W.4
-
287
-
-
0023657405
-
DnaA protein binding to the plasmid origin region can substitute for primosome assembly during replication of pBR322 in vitro
-
Seufert, W., and W. Messer. 1987. DnaA protein binding to the plasmid origin region can substitute for primosome assembly during replication of pBR322 in vitro. Cell 48:73-78.
-
(1987)
Cell
, vol.48
, pp. 73-78
-
-
Seufert, W.1
Messer, W.2
-
288
-
-
0024231825
-
A novel replicon occurring naturally in Escherichia coli is a phage-plasmid hybrid
-
Seufert, W., R. Lurz, and W. Messer. 1988. A novel replicon occurring naturally in Escherichia coli is a phage-plasmid hybrid. EMBO J. 7:4005-4010.
-
(1988)
EMBO J.
, vol.7
, pp. 4005-4010
-
-
Seufert, W.1
Lurz, R.2
Messer, W.3
-
289
-
-
0021099371
-
Structural properties of the beta origin of replication of plasmid R6K
-
Shafferman, A., and D. R. Helinski. 1983. Structural properties of the beta origin of replication of plasmid R6K. J. Biol. Chem. 258:4083-4090.
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 4083-4090
-
-
Shafferman, A.1
Helinski, D.R.2
-
290
-
-
0029619778
-
Dissection of the core and auxiliary sequences in the vegetative replication origin of promiscuous plasmid RK2
-
Shah, D. S., M. A. Cross, D. Porter, and C. M. Thomas. 1995. Dissection of the core and auxiliary sequences in the vegetative replication origin of promiscuous plasmid RK2. J. Mol. Biol. 254:608-622.
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 608-622
-
-
Shah, D.S.1
Cross, M.A.2
Porter, D.3
Thomas, C.M.4
-
291
-
-
0021689474
-
Analysis of the trfA region of broad host-range plasmid RK2 by transposon mutagenesis and identification of polypeptide products
-
Shingler, V., and C. M. Thomas. 1984. Analysis of the trfA region of broad host-range plasmid RK2 by transposon mutagenesis and identification of polypeptide products. J. Mol. Biol. 175:229-249.
-
(1984)
J. Mol. Biol.
, vol.175
, pp. 229-249
-
-
Shingler, V.1
Thomas, C.M.2
-
292
-
-
0024597704
-
A host-encoded DNA-binding protein promotes termination of plasmid replication at a sequence-specific replication terminus
-
Sista, P. R., S. Mukherjee, P. Patel, G. S. Khatri, and D. Bastia. 1989. A host-encoded DNA-binding protein promotes termination of plasmid replication at a sequence-specific replication terminus. Proc. Natl. Acad. Sci. USA 86:3026-3030.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 3026-3030
-
-
Sista, P.R.1
Mukherjee, S.2
Patel, P.3
Khatri, G.S.4
Bastia, D.5
-
293
-
-
0020769970
-
Regulatory regions of ColE1 that are involved in determination of plasmid copy number
-
Som, T., and J. Tomizawa. 1983. Regulatory regions of ColE1 that are involved in determination of plasmid copy number. Proc. Natl. Acad. Sci. USA 80:2257-2261.
-
(1983)
Proc. Natl. Acad. Sci. USA
, vol.80
, pp. 2257-2261
-
-
Som, T.1
Tomizawa, J.2
-
294
-
-
0018351589
-
Nucleotide sequence of the region of an origin of the antibiotic resistance plasmid R6K
-
Stalker, D. M., R. Kolter, and D. R. Helinski. 1979. Nucleotide sequence of the region of an origin of the antibiotic resistance plasmid R6K. Proc. Natl. Acad. Sci. USA 76:1150-1154.
-
(1979)
Proc. Natl. Acad. Sci. USA
, vol.76
, pp. 1150-1154
-
-
Stalker, D.M.1
Kolter, R.2
Helinski, D.R.3
-
295
-
-
0020445671
-
Plasmid R6K DNA replication. I. Complete nucleotide sequence of an autonomously replicating segment
-
Stalker, D. M., R. Kolter, and D. R. Helinski. 1982. Plasmid R6K DNA replication. I. Complete nucleotide sequence of an autonomously replicating segment. J. Mol. Biol. 161:33-43.
-
(1982)
J. Mol. Biol.
, vol.161
, pp. 33-43
-
-
Stalker, D.M.1
Kolter, R.2
Helinski, D.R.3
-
296
-
-
0019378492
-
Nucleotide sequence of the region of the origin of replication of the broad host range plasmid RK2
-
Stalker, D. M., C. M. Thomas, and D. R. Helinski. 1981. Nucleotide sequence of the region of the origin of replication of the broad host range plasmid RK2. Mol. Gen. Genet. 181:8-12.
-
(1981)
Mol. Gen. Genet.
, vol.181
, pp. 8-12
-
-
Stalker, D.M.1
Thomas, C.M.2
Helinski, D.R.3
-
297
-
-
0018153867
-
Structure and replication of the colicin E1 plasmid
-
Staudenbauer, W. L. 1978. Structure and replication of the colicin E1 plasmid. Curr. Top. Microbiol. Immunol. 83:93-156.
-
(1978)
Curr. Top. Microbiol. Immunol.
, vol.83
, pp. 93-156
-
-
Staudenbauer, W.L.1
-
298
-
-
0018569559
-
Replication of the colicin E1 plasmid in extracts of Escherichia coli: Uncoupling of leading strand from lagging strand synthesis
-
Staudenbauer, W. L., H. Scherzinger, and E. Lanka. 1979. Replication of the colicin E1 plasmid in extracts of Escherichia coli: uncoupling of leading strand from lagging strand synthesis. Mol. Gen. Genet. 177:113-120.
-
(1979)
Mol. Gen. Genet.
, vol.177
, pp. 113-120
-
-
Staudenbauer, W.L.1
Scherzinger, H.2
Lanka, E.3
-
299
-
-
0025952217
-
Cooperativity at a distance promoted by the combined action of two replication initiator proteins and a DNA bending protein at the replication origin of pSC101
-
Stenzel, T. T., T. MacAllister, and D. Bastia. 1991. Cooperativity at a distance promoted by the combined action of two replication initiator proteins and a DNA bending protein at the replication origin of pSC101. Genes Dev. 5:1453-1463.
-
(1991)
Genes Dev.
, vol.5
, pp. 1453-1463
-
-
Stenzel, T.T.1
MacAllister, T.2
Bastia, D.3
-
300
-
-
0023644961
-
The integration host factor of Escherichia coli binds to bent DNA at the origin of replication of the plasmid pSC101
-
Stenzel, T. T., P. Patel, and D. Bastia. 1987. The integration host factor of Escherichia coli binds to bent DNA at the origin of replication of the plasmid pSC101. Cell 49:709-717.
-
(1987)
Cell
, vol.49
, pp. 709-717
-
-
Stenzel, T.T.1
Patel, P.2
Bastia, D.3
-
301
-
-
0027220103
-
Minimal essential origin of plasmid pSC101 replication: Requirement of a region downstream of iterons
-
Sugiura, S., S. Ohkubo, and K. Yamaguchi. 1993. Minimal essential origin of plasmid pSC101 replication: requirement of a region downstream of iterons. J. Bacteriol. 175:5993-6001.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 5993-6001
-
-
Sugiura, S.1
Ohkubo, S.2
Yamaguchi, K.3
-
302
-
-
0029352111
-
Identification of a common fold in the replication terminator protein suggests a possible model for DNA binding
-
Swindells, M. B. 1995. Identification of a common fold in the replication terminator protein suggests a possible model for DNA binding. Trends Biochem. Sci. 20:300-302.
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 300-302
-
-
Swindells, M.B.1
-
303
-
-
0021066950
-
A comparison of the origin of replication of pSa with R6K
-
Tait, R. C., C. I. Kado, and R. L. Rodriguez. 1983. A comparison of the origin of replication of pSa with R6K. Mol. Gen. Genet. 192:32-38.
-
(1983)
Mol. Gen. Genet.
, vol.192
, pp. 32-38
-
-
Tait, R.C.1
Kado, C.I.2
Rodriguez, R.L.3
-
304
-
-
0028241477
-
Control of ColE2 plasmid replication: Regulation of Rep expression by a plasmid-coded antisense RNA
-
Takechi, S., H. Yasueda, and T. Itoh. 1994. Control of ColE2 plasmid replication: regulation of Rep expression by a plasmid-coded antisense RNA. Mol. Gen. Genet. 244:49-56.
-
(1994)
Mol. Gen. Genet.
, vol.244
, pp. 49-56
-
-
Takechi, S.1
Yasueda, H.2
Itoh, T.3
-
305
-
-
0028834276
-
Primer RNA synthesis by plasmid-specific Rep protein for initiation of ColE2 DNA replication
-
Takechi, S., H. Matsui, and T. Itoh. 1995. Primer RNA synthesis by plasmid-specific Rep protein for initiation of ColE2 DNA replication. EMBO J. 14:5141-5147.
-
(1995)
EMBO J.
, vol.14
, pp. 5141-5147
-
-
Takechi, S.1
Matsui, H.2
Itoh, T.3
-
306
-
-
0028359401
-
Functional difference between the two oppositely oriented priming signals essential for the initiation of the broad host-range plasmid RSF1010 DNA replication
-
Tanaka, K., K. Kino, Y. Taguchi, D. M. Miao, Y. Honda, H. Sakai, T. Komano, and M. Bagdasarian. 1994. Functional difference between the two oppositely oriented priming signals essential for the initiation of the broad host-range plasmid RSF1010 DNA replication. Nucleic Acids Res. 22:767-772.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 767-772
-
-
Tanaka, K.1
Kino, K.2
Taguchi, Y.3
Miao, D.M.4
Honda, Y.5
Sakai, H.6
Komano, T.7
Bagdasarian, M.8
-
307
-
-
0024432594
-
DnaA protein is not essential for replication of incF II plasmid NR1
-
Tang, X. B., D. D. Womble, and R. H. Rownd. 1989. DnaA protein is not essential for replication of incF II plasmid NR1. J. Bacteriol. 171:5290-5295.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 5290-5295
-
-
Tang, X.B.1
Womble, D.D.2
Rownd, R.H.3
-
308
-
-
1842383697
-
Single-stranded plasmid DNA in Bacillus subtilis and Staphylococcus aureus
-
te Riele, H., B. Michel, and S. D. Ehrlich. 1986. Single-stranded plasmid DNA in Bacillus subtilis and Staphylococcus aureus. Proc. Natl. Acad. Sci. USA 83:2541-2545.
-
(1986)
Proc. Natl. Acad. Sci. USA
, vol.83
, pp. 2541-2545
-
-
Te Riele, H.1
Michel, B.2
Ehrlich, S.D.3
-
309
-
-
0025214478
-
In vitro studies of the initiation of staphylococcal plasmid replication
-
Thomas, C. D., D. F. Balson, and W. V. Shaw. 1990. In vitro studies of the initiation of staphylococcal plasmid replication. J. Biol. Chem. 265:5519-5530.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 5519-5530
-
-
Thomas, C.D.1
Balson, D.F.2
Shaw, W.V.3
-
310
-
-
0029588552
-
Determination of sequence specificity between a plasmid replication initiator protein and the origin of replication
-
Thomas, C. D., T. T. Nikiforov, B. A. Connolly, and W. V. Shaw. 1995. Determination of sequence specificity between a plasmid replication initiator protein and the origin of replication. J. Mol. Biol. 254:381-391.
-
(1995)
J. Mol. Biol.
, vol.254
, pp. 381-391
-
-
Thomas, C.D.1
Nikiforov, T.T.2
Connolly, B.A.3
Shaw, W.V.4
-
311
-
-
0023875524
-
Recent studies on the control of plasmid replication
-
Thomas, C. M. 1988. Recent studies on the control of plasmid replication. Biochim. Biophys. Acta 949:253-263.
-
(1988)
Biochim. Biophys. Acta
, vol.949
, pp. 253-263
-
-
Thomas, C.M.1
-
312
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
313
-
-
0019479019
-
Direct repeats of the plasmid incC region express F incompatibility
-
Tolun, A., and D. R. Helinski. 1981. Direct repeats of the plasmid incC region express F incompatibility. Cell 24:687-694.
-
(1981)
Cell
, vol.24
, pp. 687-694
-
-
Tolun, A.1
Helinski, D.R.2
-
314
-
-
0019629627
-
Plasmid ColE1 incompatibility determined by interaction of RNA1 with primer transcript
-
Tomizawa, J., and T. Itoh. 1981. Plasmid ColE1 incompatibility determined by interaction of RNA1 with primer transcript. Proc. Natl. Acad. Sci. USA 78:6096-6100.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 6096-6100
-
-
Tomizawa, J.1
Itoh, T.2
-
315
-
-
0038741553
-
Replication of colicin E1 plasmid DNA in cell extracts. Origin and direction of replication
-
Tomizawa, J., Y. Sakakibara, and T. Kakefuda. 1974. Replication of colicin E1 plasmid DNA in cell extracts. Origin and direction of replication. Proc. Natl. Acad. Sci. USA 71:2260-2264.
-
(1974)
Proc. Natl. Acad. Sci. USA
, vol.71
, pp. 2260-2264
-
-
Tomizawa, J.1
Sakakibara, Y.2
Kakefuda, T.3
-
317
-
-
0016825234
-
Two distinct mechanisms of synthesis of DNA fragments on colicin E1 plasmid DNA
-
Tomizawa, J. 1975. Two distinct mechanisms of synthesis of DNA fragments on colicin E1 plasmid DNA. Nature 257:253-254.
-
(1975)
Nature
, vol.257
, pp. 253-254
-
-
Tomizawa, J.1
-
319
-
-
0347251707
-
Replication of colicin E1 plasmid DNA in vitro
-
I. Molineux and M. Kohiyama (ed.) Plenum Publishing Co., New York, N.Y.
-
Tomizawa, J. 1978. Replication of colicin E1 plasmid DNA in vitro, p. 797-826. In I. Molineux and M. Kohiyama (ed.), DNA synthesis: present and future. Plenum Publishing Co., New York, N.Y.
-
(1978)
DNA Synthesis: Present and Future
, pp. 797-826
-
-
Tomizawa, J.1
-
320
-
-
0021929398
-
A two-stage molecular model for control of mini-F replication
-
Trawick, J. D., and C. Kline. 1985. A two-stage molecular model for control of mini-F replication. Plasmid 13:59-69.
-
(1985)
Plasmid
, vol.13
, pp. 59-69
-
-
Trawick, J.D.1
Kline, C.2
-
321
-
-
0020504894
-
Role of nine repeating sequences of the mini-F genome for expression of F-specific incompatibility phenotype and copy number control
-
Tsutsui, H., A. Fujiyama, T. Murotsu, and K. Matsubara. 1983. Role of nine repeating sequences of the mini-F genome for expression of F-specific incompatibility phenotype and copy number control. J. Bacteriol. 153:337-344.
-
(1983)
J. Bacteriol.
, vol.153
, pp. 337-344
-
-
Tsutsui, H.1
Fujiyama, A.2
Murotsu, T.3
Matsubara, K.4
-
322
-
-
0018831237
-
Trans-complementable copy-number mutants of plasmid ColE1
-
Twigg, A. J., and D. Sherrat. 1980. Trans-complementable copy-number mutants of plasmid ColE1. Nature 283:216-218.
-
(1980)
Nature
, vol.283
, pp. 216-218
-
-
Twigg, A.J.1
Sherrat, D.2
-
323
-
-
0018174787
-
A runaway-replication mutant of plasmid Rldrd-19: Temperature-dependent loss of copy number control
-
Uhlin, B. E., and K. Nordström. 1978. A runaway-replication mutant of plasmid Rldrd-19: temperature-dependent loss of copy number control. Mol. Gen. Genet. 165:167-179.
-
(1978)
Mol. Gen. Genet.
, vol.165
, pp. 167-179
-
-
Uhlin, B.E.1
Nordström, K.2
-
324
-
-
0024449325
-
Similarity of minus origins of replication and flanking open reading frames of plasmid pUB110, pTB913 and pMV158
-
van der Lelie, D., S. Bron, G. Venema, and L. Oskam. 1989. Similarity of minus origins of replication and flanking open reading frames of plasmid pUB110, pTB913 and pMV158. Nucleic Acids Res. 17:7283-7294.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 7283-7294
-
-
Van Der Lelie, D.1
Bron, S.2
Venema, G.3
Oskam, L.4
-
325
-
-
0029829131
-
The ColE1 unidirectional origin acts as polar replication fork pausing site
-
Viguera, E., P. Hernandez, D. B. Krimer, A. S. Boistov, R. Lurz, J. C. Alonso, and J. B. Schvartzman. 1996. The ColE1 unidirectional origin acts as polar replication fork pausing site. J. Biol. Chem. 271:22414-22421.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 22414-22421
-
-
Viguera, E.1
Hernandez, P.2
Krimer, D.B.3
Boistov, A.S.4
Lurz, R.5
Alonso, J.C.6
Schvartzman, J.B.7
-
326
-
-
0021073593
-
DNA-protein interaction at the origin of DNA replication of the plasmid pSC101
-
Vocke, C., and D. Bastia. 1983. DNA-protein interaction at the origin of DNA replication of the plasmid pSC101. Cell 35:495-502.
-
(1983)
Cell
, vol.35
, pp. 495-502
-
-
Vocke, C.1
Bastia, D.2
-
327
-
-
85041131924
-
Antisense RNA control in bacteria phages, and plasmids
-
Wagner, E. G. H., and R. W. Simons. 1994. Antisense RNA control in bacteria phages, and plasmids. Annu. Rev. Microbiol. 48:713-742.
-
(1994)
Annu. Rev. Microbiol.
, vol.48
, pp. 713-742
-
-
Wagner, E.G.H.1
Simons, R.W.2
-
328
-
-
0027515570
-
Processes at the nick region link conjugation, T-DNA transfer and rolling circle replication
-
Waters, V. L., and D. G. Guiney. 1993. Processes at the nick region link conjugation, T-DNA transfer and rolling circle replication. Mol. Microbiol. 9:1123-1130.
-
(1993)
Mol. Microbiol.
, vol.9
, pp. 1123-1130
-
-
Waters, V.L.1
Guiney, D.G.2
-
329
-
-
0026547110
-
Specificity of origin recognition by replication initiator protein in plasmids of the pT181 family is determined by a six amino acid residue element
-
Wang, P.-Z., S. J. Projan, V. Henriquez, and R. P. Novick. 1992. Specificity of origin recognition by replication initiator protein in plasmids of the pT181 family is determined by a six amino acid residue element. J. Mol. Biol. 223:145-158.
-
(1992)
J. Mol. Biol.
, vol.223
, pp. 145-158
-
-
Wang, P.-Z.1
Projan, S.J.2
Henriquez, V.3
Novick, R.P.4
-
330
-
-
0027452822
-
Origin recognition specificity in pT181 plasmid is determined by a functionally asymmetric palindromic DNA element
-
Wang, P.-Z., S. J. Projan, V. Henriquez, and R. P. Novick. 1993. Origin recognition specificity in pT181 plasmid is determined by a functionally asymmetric palindromic DNA element. EMBO J. 12:45-52.
-
(1993)
EMBO J.
, vol.12
, pp. 45-52
-
-
Wang, P.-Z.1
Projan, S.J.2
Henriquez, V.3
Novick, R.P.4
-
331
-
-
0025266168
-
Three Escherichia coli heat shock proteins are required lor P1 plasmid DNA replication: Formation of an active complex between E. coli DnaJ protein and the P1 initiator protein
-
Wickner, S. 1990. Three Escherichia coli heat shock proteins are required lor P1 plasmid DNA replication: formation of an active complex between E. coli DnaJ protein and the P1 initiator protein. Proc. Natl. Acad. Sci. USA 87:3690-3694.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 3690-3694
-
-
Wickner, S.1
-
332
-
-
0010702318
-
Replication of mini-P1 plasmid DNA in vitro requires two initiation proteins, encoded by the repA gene of phage P1 and the dnaA gene of Escherichia coli
-
Wickner, S., and D. Chattoraj. 1987. Replication of mini-P1 plasmid DNA in vitro requires two initiation proteins, encoded by the repA gene of phage P1 and the dnaA gene of Escherichia coli. Proc. Natl. Acad. Sci. USA 84:3668-3672.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 3668-3672
-
-
Wickner, S.1
Chattoraj, D.2
-
333
-
-
0025353850
-
Deletion analysis of the mini-P1 plasmid origin of replication and the role of Escherichia coli DnaA protein
-
Wickner, S., J. Hoskins, D. Chattoraj, and K. McKenney. 1990. Deletion analysis of the mini-P1 plasmid origin of replication and the role of Escherichia coli DnaA protein. J. Biol. Chem. 165:11622-11627.
-
(1990)
J. Biol. Chem.
, vol.165
, pp. 11622-11627
-
-
Wickner, S.1
Hoskins, J.2
Chattoraj, D.3
McKenney, K.4
-
334
-
-
0025875276
-
Function of DnaJ and DnaK as chaperones in origin-specific DNA binding by RepA
-
Wickner, S., J. Hoskins, and K. McKenney. 1991. Function of DnaJ and DnaK as chaperones in origin-specific DNA binding by RepA. Nature 350:165-167.
-
(1991)
Nature
, vol.350
, pp. 165-167
-
-
Wickner, S.1
Hoskins, J.2
McKenney, K.3
-
335
-
-
0027996745
-
A molecular chaperone, ClpA, functions like DnaK and DnaJ
-
Wickner, S., S. Gottesman, D. Skowyra, J. Hoskins, K. McKenney, and M. R. Maurizi. 1994. A molecular chaperone, ClpA, functions like DnaK and DnaJ. Proc. Natl. Acad. Sci. USA 91:12218-12222.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 12218-12222
-
-
Wickner, S.1
Gottesman, S.2
Skowyra, D.3
Hoskins, J.4
McKenney, K.5
Maurizi, M.R.6
-
336
-
-
0027383344
-
The structure of the initiation complex at the replication origin, oriC, of Escherichia coli
-
Woelker, B., and W. Messer. 1993. The structure of the initiation complex at the replication origin, oriC, of Escherichia coli. Nucleic Acids Res. 21: 5025-5033.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 5025-5033
-
-
Woelker, B.1
Messer, W.2
-
337
-
-
0025300402
-
Towards a natural system of organisms. Proposal for the domains Archaea, Bacteria and Eucarya
-
Woese, C. R., O. Kandler, and M. L. Wheelis. 1990. Towards a natural system of organisms. Proposal for the domains Archaea, Bacteria and Eucarya. Proc. Natl. Acad. Sci. USA 87:4576-4579.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
338
-
-
0027519423
-
Isolation and characterization of ClpX, a new ATP-dependent specificity component of the Clp protease of Escherichia coli
-
Wojtkowiak, D., C. Georgopoulos, and M. Zylicz. 1993. Isolation and characterization of ClpX, a new ATP-dependent specificity component of the Clp protease of Escherichia coli. J. Biol. Chem. 268:22609-22617.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 22609-22617
-
-
Wojtkowiak, D.1
Georgopoulos, C.2
Zylicz, M.3
-
339
-
-
0022979426
-
Regulation of IncFII plasmid DNA replication. A quantitative model for control of plasmid NR1 replication in the bacterial cell division cycle
-
Womble, D. D., and R. H. Rownd. 1986. Regulation of IncFII plasmid DNA replication. A quantitative model for control of plasmid NR1 replication in the bacterial cell division cycle. J. Mol. Biol. 192:529-548.
-
(1986)
J. Mol. Biol.
, vol.192
, pp. 529-548
-
-
Womble, D.D.1
Rownd, R.H.2
-
340
-
-
0023644757
-
Regulation of mini-F plasmid DNA replication. A quantitative model for control of plasmid mini-F replication in the bacterial cell division cycle
-
Womble, D. D., and R. H. Rownd. 1987. Regulation of mini-F plasmid DNA replication. A quantitative model for control of plasmid mini-F replication in the bacterial cell division cycle. J. Mol. Biol. 195:99-113.
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 99-113
-
-
Womble, D.D.1
Rownd, R.H.2
-
341
-
-
0024585520
-
Structural and functional organization of ColE2 and ColE3 replicons
-
Yasueda, H., T. Horii, and T. Itoh. 1989. Structural and functional organization of ColE2 and ColE3 replicons. Mol. Gen. Genet. 215:209-216.
-
(1989)
Mol. Gen. Genet.
, vol.215
, pp. 209-216
-
-
Yasueda, H.1
Horii, T.2
Itoh, T.3
-
342
-
-
0028179107
-
Control of ColE2 plasmid replication: Negative regulation of the expression of the plasmid-specified initiator protein, Rep, at a posttranscriptional step
-
Yasueda, H., S. Takechi, T. Sugiyama, and T. Itoh. 1994. Control of ColE2 plasmid replication: negative regulation of the expression of the plasmid-specified initiator protein, Rep, at a posttranscriptional step. Mol. Gen. Genet. 244:41-48.
-
(1994)
Mol. Gen. Genet.
, vol.244
, pp. 41-48
-
-
Yasueda, H.1
Takechi, S.2
Sugiyama, T.3
Itoh, T.4
-
343
-
-
0025788333
-
Rolling-circle replication of the plasmid pKYM isolated from a Gram-negative bacterium
-
Yasukawa, H., T. Hase, A. Sakai, and Y. Masamune. 1991. Rolling-circle replication of the plasmid pKYM isolated from a Gram-negative bacterium. Proc. Natl. Acad. Sci. USA 88:10282-10286.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 10282-10286
-
-
Yasukawa, H.1
Hase, T.2
Sakai, A.3
Masamune, Y.4
-
344
-
-
0027375107
-
Autoregulation-deficient mutant of the plasmid R6K-cncoded pi protein distinguishes between palindromic and nonpalindromic binding sites
-
York, D., and M. Filutowicz. 1993. Autoregulation-deficient mutant of the plasmid R6K-cncoded pi protein distinguishes between palindromic and nonpalindromic binding sites. J. Biol. Chem. 29:21854-21861.
-
(1993)
J. Biol. Chem.
, vol.29
, pp. 21854-21861
-
-
York, D.1
Filutowicz, M.2
-
345
-
-
0026320399
-
Dissecting the functional role of PriA protein-catalyzed primosome assembly in Escherichia coil DNA replication
-
Zavitz, K. H., and K. J. Marians. 1991. Dissecting the functional role of PriA protein-catalyzed primosome assembly in Escherichia coil DNA replication. Mol. Microbiol. 5:2869-2873.
-
(1991)
Mol. Microbiol.
, vol.5
, pp. 2869-2873
-
-
Zavitz, K.H.1
Marians, K.J.2
-
346
-
-
0028858007
-
Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli
-
Zechiedrich, E. L., and N. R. Cozzarelli. 1995. Roles of topoisomerase IV and DNA gyrase in DNA unlinking during replication in Escherichia coli. Genes Dev. 9:2859-2869.
-
(1995)
Genes Dev.
, vol.9
, pp. 2859-2869
-
-
Zechiedrich, E.L.1
Cozzarelli, N.R.2
-
347
-
-
0030737510
-
Specific cleavage of chromosomal and plasmid DNA strands in Gram-positive and Gram-negative bacteria can be detected with nucleotide resolution
-
Zechner, E. L., H. Prüger, E. Grohmann, M. Espinosa, and G. Högenauer. 1997. Specific cleavage of chromosomal and plasmid DNA strands in Gram-positive and Gram-negative bacteria can be detected with nucleotide resolution. Proc. Natl. Acad. Sci. USA 94:7435-7440.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 7435-7440
-
-
Zechner, E.L.1
Prüger, H.2
Grohmann, E.3
Espinosa, M.4
Högenauer, G.5
-
348
-
-
0029841133
-
An 18-base pair sequence is sufficient for termination of rolling-circle replication of plasmid pT181
-
Zhao, A. C., and S. A. Khan. 1996. An 18-base pair sequence is sufficient for termination of rolling-circle replication of plasmid pT181. J. Bacteriol. 178:5222-5228.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 5222-5228
-
-
Zhao, A.C.1
Khan, S.A.2
-
349
-
-
0030914054
-
Sequence requirements for the termination of rolling-circle replication of plasmid pT181
-
Zhao, A. C., and S. A. Khan. 1997. Sequence requirements for the termination of rolling-circle replication of plasmid pT181. Mol. Microbiol. 24: 535-544.
-
(1997)
Mol. Microbiol.
, vol.24
, pp. 535-544
-
-
Zhao, A.C.1
Khan, S.A.2
-
350
-
-
0028268367
-
Screening for Sulfolobales, their plasmids and their viruses in Icelandic solfataras
-
Zillig, W., A. Kletzin, C. Schleper, I. Holz, D. Janekovick, J. Hain, M. Lanzendörfer, and J. K. Kristjansson. 1994. Screening for Sulfolobales, their plasmids and their viruses in Icelandic solfataras. Syst. Appl. Microbiol. 16:609-628.
-
(1994)
Syst. Appl. Microbiol.
, vol.16
, pp. 609-628
-
-
Zillig, W.1
Kletzin, A.2
Schleper, C.3
Holz, I.4
Janekovick, D.5
Hain, J.6
Lanzendörfer, M.7
Kristjansson, J.K.8
-
351
-
-
0025219919
-
Specificity of RepC protein in plasmid pT181 DNA replication
-
Zock, J. M., P. Birch, and S. A. Khan. 1990. Specificity of RepC protein in plasmid pT181 DNA replication. J. Biol. Chem. 265:3484-3488.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 3484-3488
-
-
Zock, J.M.1
Birch, P.2
Khan, S.A.3
|