-
1
-
-
0029893874
-
Mechanisms of helicase-catalyzed DNA unwinding
-
of special interest. An excellent review of the current literature within the field of study.
-
of special interest Lohman TM, Bjornson KP. Mechanisms of helicase-catalyzed DNA unwinding. Annu Rev Biochem. 65:1996;169-214 An excellent review of the current literature within the field of study.
-
(1996)
Annu Rev Biochem
, vol.65
, pp. 169-214
-
-
Lohman, T.M.1
Bjornson, K.P.2
-
2
-
-
0027950513
-
DNA helicases: Enzymes with essential roles in all aspects of DNA metabolism
-
Matson SW, Bean DW, George JW. DNA helicases: enzymes with essential roles in all aspects of DNA metabolism. Bioessays. 16:1994;13-22.
-
(1994)
Bioessays
, vol.16
, pp. 13-22
-
-
Matson, S.W.1
Bean, D.W.2
George, J.W.3
-
3
-
-
0026569419
-
D-E-A-D protein family of putative RNA helicases
-
Schmid SR, Linder P. D-E-A-D protein family of putative RNA helicases. Mol Microbiol. 6:1992;283-292.
-
(1992)
Mol Microbiol
, vol.6
, pp. 283-292
-
-
Schmid, S.R.1
Linder, P.2
-
4
-
-
0027182114
-
Helicases: Amino acid sequence comparisons and structure - Function relationships
-
Gorbalenya AE, Koonin EV. Helicases: amino acid sequence comparisons and structure - function relationships. Curr Opin Struct Biol. 3:1993;419-429.
-
(1993)
Curr Opin Struct Biol
, vol.3
, pp. 419-429
-
-
Gorbalenya, A.E.1
Koonin, E.V.2
-
5
-
-
0029856618
-
Crystal structure of a DExx box helicase
-
of outstanding interest. This paper describes the first crystal structure of any helicase. The structure reveals an unexpected homology with the ATP-binding domain of RecA and tandem repeat of this fold, with the ATP-binding site situated between them.
-
of outstanding interest Subramanya HS, Bird LE, Brannigan JA, Wigley DB. Crystal structure of a DExx box helicase. Nature. 384:1996;379-383 This paper describes the first crystal structure of any helicase. The structure reveals an unexpected homology with the ATP-binding domain of RecA and tandem repeat of this fold, with the ATP-binding site situated between them.
-
(1996)
Nature
, vol.384
, pp. 379-383
-
-
Subramanya, H.S.1
Bird, L.E.2
Brannigan, J.A.3
Wigley, D.B.4
-
6
-
-
0026500416
-
The structure of the E. coli RecA protein monomer and polymer
-
Story RM, Steitz TA. The structure of the E. coli RecA protein monomer and polymer. Nature. 355:1992;318-325.
-
(1992)
Nature
, vol.355
, pp. 318-325
-
-
Story, R.M.1
Steitz, T.A.2
-
7
-
-
0026584599
-
Structure of the RecA protein - ADP complex
-
Story RM, Weber IT, Steitz TA. Structure of the RecA protein - ADP complex. Nature. 355:1992;374-376.
-
(1992)
Nature
, vol.355
, pp. 374-376
-
-
Story, R.M.1
Weber, I.T.2
Steitz, T.A.3
-
8
-
-
0030979410
-
Structure of the hepatitis C virus RNA helicase domain
-
of outstanding interest. The authors present the first crystal structure of an RNA helicase.
-
of outstanding interest Yao NH, Hesson T, Cable M, Hong Z, Kwong AD, Le HV, Weber PC. Structure of the hepatitis C virus RNA helicase domain. Nat Struct Biol. 4:1997;463-467 The authors present the first crystal structure of an RNA helicase.
-
(1997)
Nat Struct Biol
, vol.4
, pp. 463-467
-
-
Yao, N.H.1
Hesson, T.2
Cable, M.3
Hong, Z.4
Kwong, A.D.5
Le, H.V.6
Weber, P.C.7
-
9
-
-
0030740262
-
Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP
-
of outstanding interest. The structure of the complex of Rep helicase with a single-stranded 16 base DNA oligonucleotide is described. Two protein monomers bind to the same DNA molecule but each molecule adopts a different conformation. These different conformations are thought to be essential for the overall mechanism of the enzyme.
-
of outstanding interest Korolev S, Hsieh J, Gauss GH, Lohman TM, Waksman G. Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP. Cell. 90:1997;635-647 The structure of the complex of Rep helicase with a single-stranded 16 base DNA oligonucleotide is described. Two protein monomers bind to the same DNA molecule but each molecule adopts a different conformation. These different conformations are thought to be essential for the overall mechanism of the enzyme.
-
(1997)
Cell
, vol.90
, pp. 635-647
-
-
Korolev, S.1
Hsieh, J.2
Gauss, G.H.3
Lohman, T.M.4
Waksman, G.5
-
10
-
-
0030065608
-
Two domains of superfamily I helicases may exist as separate proteins
-
of outstanding interest
-
of outstanding interest Koonin EV, Rudd KE. Two domains of superfamily I helicases may exist as separate proteins. Protein Sci. 5:1996;178-180.
-
(1996)
Protein Sci
, vol.5
, pp. 178-180
-
-
Koonin, E.V.1
Rudd, K.E.2
-
11
-
-
0030586054
-
Homomorphous hexameric helicases: Tales from the ring cycle
-
An excellent mini review of the present electron microscopy evidence for a common structure amongst hexameric DNA helicases.
-
Egelman EH. Homomorphous hexameric helicases: tales from the ring cycle. Structure. 4:1996;759-762 An excellent mini review of the present electron microscopy evidence for a common structure amongst hexameric DNA helicases.
-
(1996)
Structure
, vol.4
, pp. 759-762
-
-
Egelman, E.H.1
-
12
-
-
0028050051
-
The Escherichia coli RuvB branch migration protein forms double rings around DNA
-
Stasiak A, Tsaneva IR, West SC, Benson CJB, Yu X, Egelman EH. The Escherichia coli RuvB branch migration protein forms double rings around DNA. Proc Natl Acad Sci USA. 91:1994;7618-7622.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 7618-7622
-
-
Stasiak, A.1
Tsaneva, I.R.2
West, S.C.3
Benson, C.J.B.4
Yu, X.5
Egelman, E.H.6
-
13
-
-
0029039925
-
Bacteriophage T7 helicase/primase form rings around single-stranded DNA that suggest a general structure for hexameric helicases
-
Egelman EH, Yu X, Wild R, Hingorani M, Patel SS. Bacteriophage T7 helicase/primase form rings around single-stranded DNA that suggest a general structure for hexameric helicases. Proc Natl Acad Sci USA. 92:1995;3869-3873.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 3869-3873
-
-
Egelman, E.H.1
Yu, X.2
Wild, R.3
Hingorani, M.4
Patel, S.S.5
-
14
-
-
0024550638
-
ATP-dependent assembly of double hexamers of SV40 T-antigen at the viral origin of DNA-replication
-
Mastrangelo IA, Hough PVC, Wall JS, Dodson M, Dean FB, Hurwitz J. ATP-dependent assembly of double hexamers of SV40 T-antigen at the viral origin of DNA-replication. Nature. 338:1989;658-662.
-
(1989)
Nature
, vol.338
, pp. 658-662
-
-
Mastrangelo, I.A.1
Hough, P.V.C.2
Wall, J.S.3
Dodson, M.4
Dean, F.B.5
Hurwitz, J.6
-
15
-
-
0031585985
-
Six molecules of SV40 large T antigen assemble in a propeller-shaped particle around a channel
-
San Martin MC, Gruss C, Carazo JM. Six molecules of SV40 large T antigen assemble in a propeller-shaped particle around a channel. J Mol Biol. 268:1997;15-20.
-
(1997)
J Mol Biol
, vol.268
, pp. 15-20
-
-
San Martin, M.C.1
Gruss, C.2
Carazo, J.M.3
-
16
-
-
0029147295
-
A structural model for the Escherichia coli DnaB helicase based on electron microscopy data
-
San Martin MC, Stamford NPJ, Dammerova N, Dixon NE, Carazo JM. A structural model for the Escherichia coli DnaB helicase based on electron microscopy data. J Struct Biol. 114:1995;167-176.
-
(1995)
J Struct Biol
, vol.114
, pp. 167-176
-
-
San Martin, M.C.1
Stamford, N.P.J.2
Dammerova, N.3
Dixon, N.E.4
Carazo, J.M.5
-
17
-
-
0026444104
-
Purification and properties of the RuvA and RuvB proteins of Escherichia coli
-
Tsaneva IR, Illing GT, Lloyd R, West SC. Purification and properties of the RuvA and RuvB proteins of Escherichia coli. Mol Gen Genet. 235:1992;1-10.
-
(1992)
Mol Gen Genet
, vol.235
, pp. 1-10
-
-
Tsaneva, I.R.1
Illing, G.T.2
Lloyd, R.3
West, S.C.4
-
18
-
-
0026597267
-
Physical properties of the Escherichia coli transcription termination factor Rho. II. Quaternary structure of the Rho hexamer
-
Geiselmann J, Seifreid SE, Yager TD, Liang C, von Hippel PH. Physical properties of the Escherichia coli transcription termination factor Rho. II. Quaternary structure of the Rho hexamer. Biochemistry. 31:1992;121-132.
-
(1992)
Biochemistry
, vol.31
, pp. 121-132
-
-
Geiselmann, J.1
Seifreid, S.E.2
Yager, T.D.3
Liang, C.4
Von Hippel, P.H.5
-
19
-
-
0028905501
-
The phage T4-coded DNA replication helicase (gp41) forms a hexamer upon activation by nucleoside triphosphate
-
Dong F, Gogol EP, von Hippel PH. The phage T4-coded DNA replication helicase (gp41) forms a hexamer upon activation by nucleoside triphosphate. J Biol Chem. 270:1995;7462-7473.
-
(1995)
J Biol Chem
, vol.270
, pp. 7462-7473
-
-
Dong, F.1
Gogol, E.P.2
Von Hippel, P.H.3
-
20
-
-
0029984117
-
The hexameric E. coli DnaB helicase exists in several different quaternary states
-
Yu X, Jezewska MJ, Bujalowski W, Egelman EH. The hexameric E. coli DnaB helicase exists in several different quaternary states. J Mol Biol. 259:1996;7-14.
-
(1996)
J Mol Biol
, vol.259
, pp. 7-14
-
-
Yu, X.1
Jezewska, M.J.2
Bujalowski, W.3
Egelman, E.H.4
-
21
-
-
0023689074
-
UL5, a protein required for HSV DNA synthesis. Genetic analysis, overexpression in Escherichia coli, and generation of polyclonal antibodies
-
Zhu L, Weller SK. UL5, a protein required for HSV DNA synthesis. Genetic analysis, overexpression in Escherichia coli, and generation of polyclonal antibodies. Virology. 166:1988;366-378.
-
(1988)
Virology
, vol.166
, pp. 366-378
-
-
Zhu, L.1
Weller, S.K.2
-
23
-
-
0023903468
-
The unwinding of duplex regions in DNA by the simian virus 40 large tumour antigen-associated DNA helicase activity
-
Goetz GS, Dean FB, Hurwitz J, Matson SW. The unwinding of duplex regions in DNA by the simian virus 40 large tumour antigen-associated DNA helicase activity. J Biol Chem. 263:1988;383-392.
-
(1988)
J Biol Chem
, vol.263
, pp. 383-392
-
-
Goetz, G.S.1
Dean, F.B.2
Hurwitz, J.3
Matson, S.W.4
-
24
-
-
0023906245
-
Simian virus 40 large T antigen DNA helicase: Characterisation of the ATPase dependent unwinding activity and its substrate requirements
-
Wiekowski M, Schwarz MW, Stahl H. Simian virus 40 large T antigen DNA helicase: Characterisation of the ATPase dependent unwinding activity and its substrate requirements. J Biol Chem. 263:1988;436-442.
-
(1988)
J Biol Chem
, vol.263
, pp. 436-442
-
-
Wiekowski, M.1
Schwarz, M.W.2
Stahl, H.3
-
25
-
-
0030924142
-
Reversal in the direction of movement of a molecular motor
-
Henningsen U, Schliwa M. Reversal in the direction of movement of a molecular motor. Nature. 389:1997;93-96.
-
(1997)
Nature
, vol.389
, pp. 93-96
-
-
Henningsen, U.1
Schliwa, M.2
-
26
-
-
0030874883
-
The directional preference of kinesin motors is specified by an element outside of the motor catalytic domain
-
Case RB, Pierce DW, Hom-Booher N, Hart CL, Vale RD. The directional preference of kinesin motors is specified by an element outside of the motor catalytic domain. Cell. 90:1997;959-966.
-
(1997)
Cell
, vol.90
, pp. 959-966
-
-
Case, R.B.1
Pierce, D.W.2
Hom-Booher, N.3
Hart, C.L.4
Vale, R.D.5
-
27
-
-
0024278984
-
Structure of helical RecA-DNA complexes. 3. The structural polarity of RecA filaments and functional polarity in the RecA-mediated strand exchange-reaction
-
Stasiak A, Egelman EH, Howard-Flanders P. Structure of helical RecA-DNA complexes. 3. The structural polarity of RecA filaments and functional polarity in the RecA-mediated strand exchange-reaction. J Mol Biol. 202:1988;659-662.
-
(1988)
J Mol Biol
, vol.202
, pp. 659-662
-
-
Stasiak, A.1
Egelman, E.H.2
Howard-Flanders, P.3
-
29
-
-
0024843435
-
Visualization of RecA protein and its complexes with DNA by quick-freeze deep-etch electron-microscopy
-
Heuser J, Griffith J. Visualization of RecA protein and its complexes with DNA by quick-freeze deep-etch electron-microscopy. J Mol Biol. 210:1989;473-484.
-
(1989)
J Mol Biol
, vol.210
, pp. 473-484
-
-
Heuser, J.1
Griffith, J.2
-
30
-
-
0025661990
-
RecA protein self-assembly. 2. Analytical equilibrium ultracentrifugation studies of the entropy-driven self-association of RecA
-
Brenner SL, Zlotnick A, Stafford WFI. RecA protein self-assembly. 2. Analytical equilibrium ultracentrifugation studies of the entropy-driven self-association of RecA. J Mol Biol. 216:1990;949-964.
-
(1990)
J Mol Biol
, vol.216
, pp. 949-964
-
-
Brenner, S.L.1
Zlotnick, A.2
Stafford, W.F.I.3
-
32
-
-
0020405926
-
New properties of simian virus 40 large T antigen
-
Seif R. New properties of simian virus 40 large T antigen. Mol Cell Biol. 2:1982;1463-1471.
-
(1982)
Mol Cell Biol
, vol.2
, pp. 1463-1471
-
-
Seif, R.1
-
33
-
-
0028128864
-
Phylogenetic analysis of sequences from diverse bacteria with homology to Escherichia coli rho gene
-
Opperman T, Richardson JP. Phylogenetic analysis of sequences from diverse bacteria with homology to Escherichia coli rho gene. J Bacteriol. 176:1994;5033-5043.
-
(1994)
J Bacteriol
, vol.176
, pp. 5033-5043
-
-
Opperman, T.1
Richardson, J.P.2
-
34
-
-
0029565119
-
Structural and functional dissections of transcription factor terminator factor Rho by random mutagenesis
-
Miwa Y, Horiguchi T, Shigesada K. Structural and functional dissections of transcription factor terminator factor Rho by random mutagenesis. J Mol Biol. 254:1995;815-837.
-
(1995)
J Mol Biol
, vol.254
, pp. 815-837
-
-
Miwa, Y.1
Horiguchi, T.2
Shigesada, K.3
-
35
-
-
1842328563
-
Characterisation and crystallisation of the helicase domain of bacteriophage T7 gene 4 protein
-
Bird LE, Häkannsson K, Pan H, Wigley DB. Characterisation and crystallisation of the helicase domain of bacteriophage T7 gene 4 protein. Nucleic Acids Res. 25:1997;2020-2026.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 2020-2026
-
-
Bird, L.E.1
Häkannsson, K.2
Pan, H.3
Wigley, D.B.4
-
36
-
-
10244263498
-
Biochemical analysis of mutant T7 primase/helicase proteins defective in DNA binding, nucleotide hydrolysis, and the coupling of hydrolysis with DNA unwinding
-
Washington MT, Rosenberg AH, Griffin K, Studier FW, Patel SS. Biochemical analysis of mutant T7 primase/helicase proteins defective in DNA binding, nucleotide hydrolysis, and the coupling of hydrolysis with DNA unwinding. J Biol Chem. 271:1996;26825-26834.
-
(1996)
J Biol Chem
, vol.271
, pp. 26825-26834
-
-
Washington, M.T.1
Rosenberg, A.H.2
Griffin, K.3
Studier, F.W.4
Patel, S.S.5
-
37
-
-
0027214787
-
Negative cooperativity in the binding of nucleotides to Escherichia coli replicative helicase DnaB protein. Interactions with fluorescent nucleotide analogs
-
Bujalowski W, Klonowska MM. Negative cooperativity in the binding of nucleotides to Escherichia coli replicative helicase DnaB protein. Interactions with fluorescent nucleotide analogs. Biochemistry. 32:1993;5888-5900.
-
(1993)
Biochemistry
, vol.32
, pp. 5888-5900
-
-
Bujalowski, W.1
Klonowska, M.M.2
-
39
-
-
0026546001
-
Allosteric effects of nucleotide cofactors on Escherichia coli Rep helicase-DNA binding
-
Wong I, Lohman TM. Allosteric effects of nucleotide cofactors on Escherichia coli Rep helicase-DNA binding. Science. 256:1992;350-355.
-
(1992)
Science
, vol.256
, pp. 350-355
-
-
Wong, I.1
Lohman, T.M.2
-
40
-
-
0018353521
-
Enzyme-catalyzed DNA unwinding: Studies on Escherichia coli rep protein
-
Yarranton GT, Geftner ML. Enzyme-catalyzed DNA unwinding: studies on Escherichia coli rep protein. Proc Natl Acad Sci USA. 76:1979;1658-1662.
-
(1979)
Proc Natl Acad Sci USA
, vol.76
, pp. 1658-1662
-
-
Yarranton, G.T.1
Geftner, M.L.2
-
41
-
-
0031031958
-
Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase
-
of special interest. Using kinetic data, the step size of the UvrD helicase is shown to be 4-5 base pairs.
-
of special interest Ali JA, Lohman TM. Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase. Science. 275:1997;377-380 Using kinetic data, the step size of the UvrD helicase is shown to be 4-5 base pairs.
-
(1997)
Science
, vol.275
, pp. 377-380
-
-
Ali, J.A.1
Lohman, T.M.2
-
42
-
-
0026356376
-
Bacterial DNA replication initiation protein PriA is related to proteins belonging to the 'DEAD-box' family
-
Ouzounis CA, Blencowe BJ. Bacterial DNA replication initiation protein PriA is related to proteins belonging to the 'DEAD-box' family. Nucleic Acids Res. 19:1991;6953.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 6953
-
-
Ouzounis, C.A.1
Blencowe, B.J.2
-
43
-
-
0030748248
-
The non-structural proteins of the hepatitis C virus: Structure and functions
-
Neddermann P, Tomei L, Steinkuhler C, Gallinari P, Tramontano A, De Francesco R. The non-structural proteins of the hepatitis C virus: structure and functions. J Biol Chem. 378:1997;469-476.
-
(1997)
J Biol Chem
, vol.378
, pp. 469-476
-
-
Neddermann, P.1
Tomei, L.2
Steinkuhler, C.3
Gallinari, P.4
Tramontano, A.5
De Francesco, R.6
-
44
-
-
0028047404
-
Genetic organisation of the conjugal DNA processing region of the IncW plasmid R388
-
Llosa M, Bolland S, de la Cruz F. Genetic organisation of the conjugal DNA processing region of the IncW plasmid R388. J Mol Biol. 235:1994;448-464.
-
(1994)
J Mol Biol
, vol.235
, pp. 448-464
-
-
Llosa, M.1
Bolland, S.2
De La Cruz, F.3
-
45
-
-
0029789574
-
Molecular cloning of Drosophila mus308, a gene involved in DNA cross-link repair with homology to prokaryotic DNA polymerase I genes
-
Harris PV, Mazina OM, Leonhardt EA, Case RB, Boyd JB, Burtis KC. Molecular cloning of Drosophila mus308, a gene involved in DNA cross-link repair with homology to prokaryotic DNA polymerase I genes. Mol Cell Biol. 16:1996;5764-5771.
-
(1996)
Mol Cell Biol
, vol.16
, pp. 5764-5771
-
-
Harris, P.V.1
Mazina, O.M.2
Leonhardt, E.A.3
Case, R.B.4
Boyd, J.B.5
Burtis, K.C.6
-
46
-
-
0027159512
-
Reverse gyrase: A helicase-like domain and a type I topoisomerase in the same polypeptide
-
Confalonieri F, Elie C, Nadal M, Bouthier de La Tour C, Forterre P, Duguet M. Reverse gyrase: a helicase-like domain and a type I topoisomerase in the same polypeptide. Proc Natl Acad Sci USA. 90:1993;4753-4757.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 4753-4757
-
-
Confalonieri, F.1
Elie, C.2
Nadal, M.3
Bouthier De La Tour, C.4
Forterre, P.5
Duguet, M.6
-
47
-
-
0029157378
-
Evolution of the SNF2 family of proteins: Subfamilies with distinct sequences and functions
-
Eisen JA, Sweder KS, Hanawit PC. Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions. Nucleic Acids Res. 23:1995;2715-2723.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 2715-2723
-
-
Eisen, J.A.1
Sweder, K.S.2
Hanawit, P.C.3
|