-
1
-
-
0347626252
-
Autophagy: A regulated bulk degradation process inside cells
-
Yoshimori T. Autophagy: A regulated bulk degradation process inside cells. Biochem Biophys Res Commun 2004; 313: 453-458.
-
(2004)
Biochem Biophys Res Commun
, vol.313
, pp. 453-458
-
-
Yoshimori, T.1
-
2
-
-
1842583789
-
Development by self-digestion: Molecular mechanisms and biological functions of autophagy
-
Levine B, Klionsky DJ. Development by self-digestion: Molecular mechanisms and biological functions of autophagy. Dev Cell 2004; 6: 463-477.
-
(2004)
Dev Cell
, vol.6
, pp. 463-477
-
-
Levine, B.1
Klionsky, D.J.2
-
3
-
-
14044277429
-
The molecular machinery of autophagy: Unanswered questions
-
Klionsky DJ. The molecular machinery of autophagy: Unanswered questions. J Cell Sci 2005; 118: 7-18.
-
(2005)
J Cell Sci
, vol.118
, pp. 7-18
-
-
Klionsky, D.J.1
-
4
-
-
33749056043
-
Macroautophagy in mammalian cells
-
P. Saftig, editor. Georgetown, TX: Landes Bioscience/Eurekah.Com
-
Eskelinen EL. Macroautophagy in mammalian cells. In:, P. Saftig, editor. Lysosomes. Georgetown, TX: Landes Bioscience/Eurekah.Com; 2004.
-
(2004)
Lysosomes
-
-
Eskelinen, E.L.1
-
5
-
-
10744225487
-
A unified nomenclature for yeast autophagy-related genes
-
Klionsky DJ, Cregg JM, Dunn WA Jr, Emr SD, Sakai Y, Sandoval IV, Sibirny A, Subramani S, Thumm M, Veenhuis M, Ohsumi Y. A unified nomenclature for yeast autophagy-related genes. Dev Cell 2003; 5: 539-545.
-
(2003)
Dev Cell
, vol.5
, pp. 539-545
-
-
Klionsky, D.J.1
Cregg, J.M.2
Dunn Jr., W.A.3
Emr, S.D.4
Sakai, Y.5
Sandoval, I.V.6
Sibirny, A.7
Subramani, S.8
Thumm, M.9
Veenhuis, M.10
Ohsumi, Y.11
-
6
-
-
0032512636
-
Tor, a phosphatidylinositol kinase homologue, controls autophagy in yeast
-
Noda T, Ohsumi Y. Tor, a phosphatidylinositol kinase homologue, controls autophagy in yeast. J Biol Chem 1998; 273: 3963-3966.
-
(1998)
J Biol Chem
, vol.273
, pp. 3963-3966
-
-
Noda, T.1
Ohsumi, Y.2
-
7
-
-
0034683568
-
Tor-mediated induction of autophagy via an Apg1 protein kinase complex
-
Kamada Y, Funakoshi T, Shintani T, Nagano K, Ohsumi M, Ohsumi Y. Tor-mediated induction of autophagy via an Apg1 protein kinase complex. J Cell Biol 2000; 150: 1507-1513.
-
(2000)
J Cell Biol
, vol.150
, pp. 1507-1513
-
-
Kamada, Y.1
Funakoshi, T.2
Shintani, T.3
Nagano, K.4
Ohsumi, M.5
Ohsumi, Y.6
-
8
-
-
0028899789
-
Phosphorylation of ribosomal protein S6 is inhibitory for autophagy in isolated rat hepatocytes
-
Blommaart EFC, Luiken JJFP, Blommaart PJE, van Woerkom GM, Meijer AJ. Phosphorylation of ribosomal protein S6 is inhibitory for autophagy in isolated rat hepatocytes. J Biol Chem 1995; 270: 2320-2326.
-
(1995)
J Biol Chem
, vol.270
, pp. 2320-2326
-
-
Blommaart, E.L.F.C.1
Luiken, J.J.F.P.2
Blommaart, P.J.E.3
van Woerkom, G.M.4
Meijer, A.J.5
-
9
-
-
0345825057
-
Signaling pathways in mammalian autophagy
-
Klionsky DJ, editor. Georgetown, TX: Landes Bioscience/Eurekah.Com
-
Codogno P, Meijer AJ. Signaling pathways in mammalian autophagy. In: Klionsky DJ, editor. Autophagy. Georgetown, TX: Landes Biioscience/ Eurekah.Com; 2004, pp. 26-47.
-
(2004)
Autophagy
, pp. 26-47
-
-
Codogno, P.1
Meijer, A.J.2
-
10
-
-
0347627140
-
Amino acid signalling and the integration of metabolism
-
Meijer AJ, Dubbelhuis PF. Amino acid signalling and the integration of metabolism. Biochem Biophys Res Commun 2004; 313: 397-403.
-
(2004)
Biochem Biophys Res Commun
, vol.313
, pp. 397-403
-
-
Meijer, A.J.1
Dubbelhuis, P.F.2
-
11
-
-
0034703021
-
Leucine limitation induces autophagy and activation of lysosome-dependent proteolysis in C2C12 myotubes through a mammalian target of rapamycin-independent signaling pathway
-
Mordier S, Deval C, Bechet D, Tassa A, Ferrara M. Leucine limitation induces autophagy and activation of lysosome-dependent proteolysis in C2C12 myotubes through a mammalian target of rapamycin-independent signaling pathway. J Biol Chem 2000; 275: 29900-29906.
-
(2000)
J Biol Chem
, vol.275
, pp. 29900-29906
-
-
Mordier, S.1
Deval, C.2
Bechet, D.3
Tassa, A.4
Ferrara, M.5
-
12
-
-
1542289063
-
Amino acids and insulin control autophagic proteolysis through different signaling pathways in relation to mTOR in isolated rat hepatocytes
-
Kanazawa T, Taneike I, Akaishi R, Yoshizawa F, Furuya N, Fujimura S, Kadowaki M. Amino acids and insulin control autophagic proteolysis through different signaling pathways in relation to mTOR in isolated rat hepatocytes. J Biol Chem 2004; 279: 8452-8459.
-
(2004)
J Biol Chem
, vol.279
, pp. 8452-8459
-
-
Kanazawa, T.1
Taneike, I.2
Akaishi, R.3
Yoshizawa, F.4
Furuya, N.5
Fujimura, S.6
Kadowaki, M.7
-
13
-
-
1842419926
-
Structural aspects of mammalian autophagy
-
Klionsky DJ, editor. Georgetown: Landes Biosciences
-
Fengsrud M, Sneve ML, Overbye A, Seglen PO. Structural aspects of mammalian autophagy. In: Klionsky DJ, editor. Autophagy. Georgetown: Landes Biosciences; 2004, pp. 11-25.
-
(2004)
Autophagy
, pp. 11-25
-
-
Fengsrud, M.1
Sneve, M.L.2
Overbye, A.3
Seglen, P.O.4
-
14
-
-
0032126632
-
Aut2p and Aut7p, two novel microtubule-associated proteins are essential for delivery of autophagic vesicles to the vacuole
-
Lang T, Schaeffeler E, Bernreuther D, Bredschneider M, Wolf DH, Thumm M. Aut2p and Aut7p, two novel microtubule-associated proteins are essential for delivery of autophagic vesicles to the vacuole. EMBO J 1998; 17: 3597-3607.
-
(1998)
EMBO J
, vol.17
, pp. 3597-3607
-
-
Lang, T.1
Schaeffeler, E.2
Bernreuther, D.3
Bredschneider, M.4
Wolf, D.H.5
Thumm, M.6
-
15
-
-
0034329418
-
LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing
-
Kabeya Y, Mizushima N, Ueno T, Yamamoto A, Kirisako T, Noda T, Kominami E, Ohsumi Y, Yoshimori T. LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing. EMBO J 2000; 19: 5720-5728.
-
(2000)
EMBO J
, vol.19
, pp. 5720-5728
-
-
Kabeya, Y.1
Mizushima, N.2
Ueno, T.3
Yamamoto, A.4
Kirisako, T.5
Noda, T.6
Kominami, E.7
Ohsumi, Y.8
Yoshimori, T.9
-
17
-
-
0035911162
-
Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells
-
Mizushima N, Yamamoto A, Hatano M, Kobayashi Y, Kabeya Y, Suzuki K, Tokuhisa T, Ohsumi Y, Yoshimori T. Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells. J Cell Biol 2001; 152: 657-667.
-
(2001)
J Cell Biol
, vol.152
, pp. 657-667
-
-
Mizushima, N.1
Yamamoto, A.2
Hatano, M.3
Kobayashi, Y.4
Kabeya, Y.5
Suzuki, K.6
Tokuhisa, T.7
Ohsumi, Y.8
Yoshimori, T.9
-
18
-
-
1542283812
-
In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker
-
Mizushima N, Yamamoto A, Matsui M, Yoshimori T, Ohsumi Y. In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker. Mol Biol Cell 2004; 15: 1101-1111.
-
(2004)
Mol Biol Cell
, vol.15
, pp. 1101-1111
-
-
Mizushima, N.1
Yamamoto, A.2
Matsui, M.3
Yoshimori, T.4
Ohsumi, Y.5
-
19
-
-
0035503594
-
The pre-autophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation
-
Suzuki K, Kirisako T, Kamada Y, Mizushima N, Noda T, Ohsumi Y. The pre-autophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation. EMBO J 2001; 20: 5971-5981.
-
(2001)
EMBO J
, vol.20
, pp. 5971-5981
-
-
Suzuki, K.1
Kirisako, T.2
Kamada, Y.3
Mizushima, N.4
Noda, T.5
Ohsumi, Y.6
-
20
-
-
0014359297
-
Studies on cellular autophagosytosis
-
Arstila AU, Trump BF. Studies on cellular autophagosytosis. Am J Pathol 1968; 53: 687-733.
-
(1968)
Am J Pathol
, vol.53
, pp. 687-733
-
-
Arstila, A.U.1
Trump, B.F.2
-
21
-
-
0025363276
-
Studies on the mechanisms of autophagy: Formation of the autophagic vacuole
-
Dunn WA Jr. Studies on the mechanisms of autophagy: Formation of the autophagic vacuole. J Cell Biol 1990; 110: 1923-1933.
-
(1990)
J Cell Biol
, vol.110
, pp. 1923-1933
-
-
Dunn Jr., W.A.1
-
22
-
-
0024299286
-
Prelysosomal convergence of autophagic and endocytic pathways
-
Gordon PB, Seglen PO. Prelysosomal convergence of autophagic and endocytic pathways. Biochem Biophys Res Commun 1988; 151: 40-47.
-
(1988)
Biochem Biophys Res Commun
, vol.151
, pp. 40-47
-
-
Gordon, P.B.1
Seglen, P.O.2
-
23
-
-
0028222874
-
Autophagy and related mechanisms of lysosome-mediated protein degradation
-
Dunn WA Jr. Autophagy and related mechanisms of lysosome-mediated protein degradation. Trends Cell Biol 1994; 4: 139-143.
-
(1994)
Trends Cell Biol
, vol.4
, pp. 139-143
-
-
Dunn Jr., W.A.1
-
24
-
-
0023852386
-
Effects of griseofulvin and nocodazole on the accumulation of autophagic vacuoles in Ehrlich ascites tumor cells
-
Reunanen H, Marttinen M, Hirsimaki P. Effects of griseofulvin and nocodazole on the accumulation of autophagic vacuoles in Ehrlich ascites tumor cells. Exp Mol Pathol 1988; 48: 97-102.
-
(1988)
Exp Mol Pathol
, vol.48
, pp. 97-102
-
-
Reunanen, H.1
Marttinen, M.2
Hirsimaki, P.3
-
25
-
-
0026787605
-
Cytoskeletal elements are required for the formation and maturation of autophagic vacuoles
-
Aplin A, Jasionowski T, Tuttle DL, Lenk SE, Dunn WAJ. Cytoskeletal elements are required for the formation and maturation of autophagic vacuoles. J Cell Physiol 1992; 152:458-466.
-
(1992)
J Cell Physiol
, vol.152
, pp. 458-466
-
-
Aplin, A.1
Jasionowski, T.2
Tuttle, D.L.3
Lenk, S.E.4
Dunn, W.A.J.5
-
26
-
-
0028856914
-
Ultrastructural and immunocytochemical characterization of autophagic vacuoles in isolated hepatocytes: Effects of vinblastine and asparagine on vacuole distributions
-
Fengsrud M, Roos N, Berg T, Liou W, Slot JW, Seglen PO. Ultrastructural and immunocytochemical characterization of autophagic vacuoles in isolated hepatocytes: Effects of vinblastine and asparagine on vacuole distributions. Exp Cell Res 1995; 221: 504-519.
-
(1995)
Exp Cell Res
, vol.221
, pp. 504-519
-
-
Fengsrud, M.1
Roos, N.2
Berg, T.3
Liou, W.4
Slot, J.W.5
Seglen, P.O.6
-
27
-
-
0027240439
-
Autophagic vacuoles fuse with the prelysosomal compartment in cultured rat fibroblasts/
-
Punnonen EL, Autio S, Kaija H, Reunanen H. Autophagic vacuoles fuse with the prelysosomal compartment in cultured rat fibroblasts. Eur J Cell Biol 1993; 61: 54-66.
-
(1993)
Eur J Cell Biol
, vol.61
, pp. 54-66
-
-
Punnonen, E.L.1
Autio, S.2
Kaija, H.3
Reunanen, H.4
-
28
-
-
0016284398
-
Studies on cellular autophagocytosis. Vinblastine-induced autophagy in the rat liver
-
Arstila AU, Nuuja IJ, Trump BF. Studies on cellular autophagocytosis. Vinblastine-induced autophagy in the rat liver. Exp Cell Res 1974; 87: 249-252.
-
(1974)
Exp Cell Res
, vol.87
, pp. 249-252
-
-
Arstila, A.U.1
Nuuja, I.J.2
Trump, B.F.3
-
29
-
-
0018834857
-
Increased degradation in rat liver induced by vinblastine. II. Morphologic characterization
-
Marzella L, Glaumann H. Increased degradation in rat liver induced by vinblastine. II. Morphologic characterization. Lab Invest 1980; 42: 18-27.
-
(1980)
Lab Invest
, vol.42
, pp. 18-27
-
-
Marzella, L.1
Glaumann, H.2
-
30
-
-
0020040519
-
Accumulation of autophagosomes after inhibition of hepatocytic protein degradation by vinblastine, leupeptin or a lysosomotropic amine
-
Kovacs AL, Reith A, Seglen PO. Accumulation of autophagosomes after inhibition of hepatocytic protein degradation by vinblastine, leupeptin or a lysosomotropic amine. Exp Cell Res 1982; 137: 191-201.
-
(1982)
Exp Cell Res
, vol.137
, pp. 191-201
-
-
Kovacs, A.L.1
Reith, A.2
Seglen, P.O.3
-
31
-
-
0025189643
-
Time course of the quantitative changes in the autophagic-lysosomal and secretory granule compartments of murine liver cells under the influence of vinblastine
-
Rez G, Laszlo L, Fellinger E, Kovacs AL, Kovacs J. Time course of the quantitative changes in the autophagic-lysosomal and secretory granule compartments of murine liver cells under the influence of vinblastine. Virchows Arch B Cell Pathol Incl Mol Pathol 1990; 58: 189-197.
-
(1990)
Virchows Arch B Cell Pathol Incl Mol Pathol
, vol.58
, pp. 189-197
-
-
Rez, G.1
Laszlo, L.2
Fellinger, E.3
Kovacs, A.L.4
Kovacs, J.5
-
32
-
-
0025237125
-
Effects of vinblastine, leucine, and histidine, and 3-methyladenine on autophagy in Ehrlich ascites cells
-
Punnonen EL, Reunanen H. Effects of vinblastine, leucine, and histidine, and 3-methyladenine on autophagy in Ehrlich ascites cells. Exp Mol Pathol 1990; 52: 87-97.
-
(1990)
Exp Mol Pathol
, vol.52
, pp. 87-97
-
-
Punnonen, E.L.1
Reunanen, H.2
-
33
-
-
0001471696
-
Isolation of hepatocytes by collagenase perfusion
-
Tysson CA, Frazier JM, editors. New York, NY: Academic Press
-
Seglen PO. Isolation of hepatocytes by collagenase perfusion. In: Tysson CA, Frazier JM, editors. Methods in Toxicology. New York, NY: Academic Press; 1993, pp. 231-243.
-
(1993)
Methods in Toxicology
, pp. 231-243
-
-
Seglen, P.O.1
-
34
-
-
0033534734
-
Regulation of translational effectors by amino acid and mammalian target of rapamycin signaling pathways. Possible involvement of autophagy in cultured hepatoma cells
-
Shigemitsu K, Tsujishita Y, Hara K, Nanahoshi M, Avruch J, Yonezawa K. Regulation of translational effectors by amino acid and mammalian target of rapamycin signaling pathways. Possible involvement of autophagy in cultured hepatoma cells. J Biol Chem 1999; 274: 1058-1065
-
(1999)
J Biol Chem
, vol.274
, pp. 1058-1065
-
-
Shigemitsu, K.1
Tsujishita, Y.2
Hara, K.3
Nanahoshi, M.4
Avruch, J.5
Yonezawa, K.6
-
35
-
-
0036899730
-
Inhibition of autophagy in mitotic animal cells
-
Eskelinen EL, Prescott AR, Cooper J, Brachmann SM, Wang L, Tang X, Backer JM, Lucocq JM. Inhibition of autophagy in mitotic animal cells. Traffic 2002; 3: 878-893.
-
(2002)
Traffic
, vol.3
, pp. 878-893
-
-
Eskelinen, E.L.1
Prescott, A.R.2
Cooper, J.3
Brachmann, S.M.4
Wang, L.5
Tang, X.6
Backer, J.M.7
Lucocq, J.M.8
-
36
-
-
3242888703
-
LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation
-
Kabeya Y, Mizushima N, Yamamoto A, Oshitani-Okamoto S, Ohsumi Y, Yoshimori T. LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation. J Cell Sci 2004; 117: 2805-2812.
-
(2004)
J Cell Sci
, vol.117
, pp. 2805-2812
-
-
Kabeya, Y.1
Mizushima, N.2
Yamamoto, A.3
Oshitani-Okamoto, S.4
Ohsumi, Y.5
Yoshimori, T.6
-
37
-
-
4344712684
-
Methods for monitoring autophagy
-
Mizushima N. Methods for monitoring autophagy. Int J Biochem Cell Biol 2004; 36: 2491-2502.
-
(2004)
Int J Biochem Cell Biol
, vol.36
, pp. 2491-2502
-
-
Mizushima, N.1
-
38
-
-
20444363122
-
The coordinate regulation of the p53 and mTOR pathways in cells
-
Feng Z, Zhang H, Levine AJ, Jin S. The coordinate regulation of the p53 and mTOR pathways in cells. Proc Natl Acad Sci USA 2005; 102: 8204-8209.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 8204-8209
-
-
Feng, Z.1
Zhang, H.2
Levine, A.J.3
Jin, S.4
-
39
-
-
0034537290
-
Autophagy as a regulated pathway of cellular degradation
-
Klionsky DJ, Emr SD. Autophagy as a regulated pathway of cellular degradation. Science 2000; 290: 1717-1721.
-
(2000)
Science
, vol.290
, pp. 1717-1721
-
-
Klionsky, D.J.1
Emr, S.D.2
-
40
-
-
0030025571
-
Three-dimensional organization of rat hepatocyte cytoskeleton: Relation to the asialoglycoprotein endocytosis pathway
-
Novikoff PM, Cammer M, Tao L, Oda H, Stockert RJ, Wolkoff AW, Satir P. Three-dimensional organization of rat hepatocyte cytoskeleton: Relation to the asialoglycoprotein endocytosis pathway. J Cell Sci 1996; 109: 21-32.
-
(1996)
J Cell Sci
, vol.109
, pp. 21-32
-
-
Novikoff, P.M.1
Cammer, M.2
Tao, L.3
Oda, H.4
Stockert, R.J.5
Wolkoff, A.W.6
Satir, P.7
-
41
-
-
0035192612
-
Autophagosome requires specific early sec proteins for its formation and NSF/SNARE for vacuolar fusion
-
Ishihara N, Hamasaki M, Yokota S, Suzuki K, Kamada Y, Kihara A, Yoshimori T, Noda T, Ohsumi Y. Autophagosome requires specific early sec proteins for its formation and NSF/SNARE for vacuolar fusion. Mol Biol Cell 2001; 12: 3690-3702.
-
(2001)
Mol Biol Cell
, vol.12
, pp. 3690-3702
-
-
Ishihara, N.1
Hamasaki, M.2
Yokota, S.3
Suzuki, K.4
Kamada, Y.5
Kihara, A.6
Yoshimori, T.7
Noda, T.8
Ohsumi, Y.9
-
42
-
-
2342566471
-
Early stages of the secretory pathway, but not endosomes, are required for Cvt vesicle and autophagosome assembly in Saccharomyces cerevisiae
-
Reggiori F, Wang CW, Nair U, Shintani T, Abeliovich H, Klionsky DJ. Early stages of the secretory pathway, but not endosomes, are required for Cvt vesicle and autophagosome assembly in Saccharomyces cerevisiae. Mol Biol Cell 2004; 15: 2189-2204
-
(2004)
Mol Biol Cell
, vol.15
, pp. 2189-2204
-
-
Reggiori, F.1
Wang, C.W.2
Nair, U.3
Shintani, T.4
Abeliovich, H.5
Klionsky, D.J.6
-
43
-
-
0034493602
-
Dynamics of transitional endoplasmic reticulum sites in vertebrate cells
-
Hammond AT, Glick BS. Dynamics of transitional endoplasmic reticulum sites in vertebrate cells. Mol Biol Cell 2000; 11: 3013-3030.
-
(2000)
Mol Biol Cell
, vol.11
, pp. 3013-3030
-
-
Hammond, A.T.1
Glick, B.S.2
-
44
-
-
0036017758
-
Induction of autophagy causes dramatic changes in the subcellular distribution of GFP-Rab24
-
Munafo DB, Colombo MI. Induction of autophagy causes dramatic changes in the subcellular distribution of GFP-Rab24. Traffic 2002; 3: 472-482.
-
(2002)
Traffic
, vol.3
, pp. 472-482
-
-
Munafo, D.B.1
Colombo, M.L.2
-
45
-
-
0021361182
-
Protein degradation in 3T3 cells and tumorigenic transformed 3T3 cells
-
Gronostajski R, Pardee AB. Protein degradation in 3T3 cells and tumorigenic transformed 3T3 cells. J Cell Physiol 1984; 119: 127-132.
-
(1984)
J Cell Physiol
, vol.119
, pp. 127-132
-
-
Gronostajski, R.1
Pardee, A.B.2
-
46
-
-
0029762913
-
Improving structural integrity of cryosections for immunogold labeling
-
Liou W, Geuze HJ, Slot JW. Improving structural integrity of cryosections for immunogold labeling. Histochem Cell Biol 1996; 106: 41-58.
-
(1996)
Histochem Cell Biol
, vol.106
, pp. 41-58
-
-
Liou, W.1
Geuze, H.J.2
Slot, J.W.3
-
47
-
-
0037328748
-
Convergence of non-clathrin- and clathrin-derived endosomes involves Arf6 inactivation and changes in phosphoinositides
-
Naslavsky N, Roberto Weigert R, Donaldson JG. Convergence of non-clathrin- and clathrin-derived endosomes involves Arf6 inactivation and changes in phosphoinositides. Mol Biol Cell 2003; 15: 417-431.
-
(2003)
Mol Biol Cell
, vol.15
, pp. 417-431
-
-
Naslavsky, N.1
Roberto Weigert, R.2
Donaldson, J.G.3
|